Multiple sequence alignment - TraesCS4D01G001700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G001700 chr4D 100.000 2790 0 0 1 2790 1204829 1207618 0.000000e+00 5153.0
1 TraesCS4D01G001700 chr4A 87.194 1593 109 39 481 2023 603636072 603634525 0.000000e+00 1724.0
2 TraesCS4D01G001700 chr4A 86.022 93 6 5 2275 2367 603631468 603631383 2.960000e-15 93.5
3 TraesCS4D01G001700 chr6A 86.166 1583 151 34 485 2033 27764878 27766426 0.000000e+00 1648.0
4 TraesCS4D01G001700 chr6A 76.875 160 20 9 142 298 27764383 27764528 1.070000e-09 75.0
5 TraesCS4D01G001700 chrUn 85.750 1586 152 32 486 2033 112252526 112254075 0.000000e+00 1609.0
6 TraesCS4D01G001700 chr6B 85.898 1397 135 31 481 1855 48544731 48546087 0.000000e+00 1432.0
7 TraesCS4D01G001700 chr6B 89.630 135 7 2 1906 2033 48546086 48546220 6.180000e-37 165.0
8 TraesCS4D01G001700 chr6B 77.707 157 21 8 142 298 48544210 48544352 1.780000e-12 84.2
9 TraesCS4D01G001700 chr4B 91.896 654 49 4 642 1294 806330 805680 0.000000e+00 911.0
10 TraesCS4D01G001700 chr4B 86.720 625 59 10 1413 2031 672108 671502 0.000000e+00 673.0
11 TraesCS4D01G001700 chr4B 91.481 493 31 4 1331 1816 805675 805187 0.000000e+00 667.0
12 TraesCS4D01G001700 chr4B 86.897 145 7 8 1815 1955 805088 804952 4.810000e-33 152.0
13 TraesCS4D01G001700 chr4B 84.058 138 14 5 2269 2399 804682 804546 2.920000e-25 126.0
14 TraesCS4D01G001700 chr4B 90.361 83 8 0 2029 2111 671454 671372 2.940000e-20 110.0
15 TraesCS4D01G001700 chr4B 97.368 38 1 0 1123 1160 672148 672111 6.450000e-07 65.8
16 TraesCS4D01G001700 chr7D 84.659 352 30 10 505 852 412486014 412486345 2.070000e-86 329.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G001700 chr4D 1204829 1207618 2789 False 5153.000000 5153 100.000000 1 2790 1 chr4D.!!$F1 2789
1 TraesCS4D01G001700 chr4A 603631383 603636072 4689 True 908.750000 1724 86.608000 481 2367 2 chr4A.!!$R1 1886
2 TraesCS4D01G001700 chr6A 27764383 27766426 2043 False 861.500000 1648 81.520500 142 2033 2 chr6A.!!$F1 1891
3 TraesCS4D01G001700 chrUn 112252526 112254075 1549 False 1609.000000 1609 85.750000 486 2033 1 chrUn.!!$F1 1547
4 TraesCS4D01G001700 chr6B 48544210 48546220 2010 False 560.400000 1432 84.411667 142 2033 3 chr6B.!!$F1 1891
5 TraesCS4D01G001700 chr4B 804546 806330 1784 True 464.000000 911 88.583000 642 2399 4 chr4B.!!$R2 1757
6 TraesCS4D01G001700 chr4B 671372 672148 776 True 282.933333 673 91.483000 1123 2111 3 chr4B.!!$R1 988

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
29 30 0.321387 TATGGTGGTTACGCGGCAAA 60.321 50.0 12.47 0.0 0.0 3.68 F
472 487 0.385974 CCAAGAAAGAAAGGCGCACG 60.386 55.0 10.83 0.0 0.0 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1245 1521 0.027979 CAAATATGTGGGCGACGCAG 59.972 55.0 23.09 0.0 43.91 5.18 R
2461 5819 0.033781 TACTACCACGGGTGTTGTGC 59.966 55.0 5.90 0.0 36.19 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.419522 CAAAGTGCAGTATGGTGGTTAC 57.580 45.455 0.00 0.00 35.86 2.50
22 23 2.380084 AGTGCAGTATGGTGGTTACG 57.620 50.000 0.00 0.00 35.86 3.18
23 24 0.725117 GTGCAGTATGGTGGTTACGC 59.275 55.000 0.00 0.00 35.86 4.42
24 25 0.738063 TGCAGTATGGTGGTTACGCG 60.738 55.000 3.53 3.53 35.86 6.01
25 26 1.426041 GCAGTATGGTGGTTACGCGG 61.426 60.000 12.47 0.00 35.86 6.46
26 27 1.153509 AGTATGGTGGTTACGCGGC 60.154 57.895 12.47 0.00 0.00 6.53
27 28 1.448189 GTATGGTGGTTACGCGGCA 60.448 57.895 12.47 0.00 0.00 5.69
28 29 1.020333 GTATGGTGGTTACGCGGCAA 61.020 55.000 12.47 0.09 0.00 4.52
29 30 0.321387 TATGGTGGTTACGCGGCAAA 60.321 50.000 12.47 0.00 0.00 3.68
30 31 1.858372 ATGGTGGTTACGCGGCAAAC 61.858 55.000 12.47 11.80 0.00 2.93
31 32 2.544698 GGTGGTTACGCGGCAAACA 61.545 57.895 12.47 10.48 0.00 2.83
32 33 1.082366 GTGGTTACGCGGCAAACAG 60.082 57.895 12.47 0.00 0.00 3.16
33 34 2.255172 TGGTTACGCGGCAAACAGG 61.255 57.895 12.47 0.00 0.00 4.00
34 35 2.255881 GGTTACGCGGCAAACAGGT 61.256 57.895 12.47 0.24 0.00 4.00
35 36 0.950071 GGTTACGCGGCAAACAGGTA 60.950 55.000 12.47 0.00 0.00 3.08
36 37 1.081094 GTTACGCGGCAAACAGGTAT 58.919 50.000 12.47 0.00 0.00 2.73
37 38 1.080298 TTACGCGGCAAACAGGTATG 58.920 50.000 12.47 0.00 0.00 2.39
38 39 1.363145 TACGCGGCAAACAGGTATGC 61.363 55.000 12.47 0.00 41.82 3.14
39 40 2.100216 GCGGCAAACAGGTATGCG 59.900 61.111 0.00 0.00 43.47 4.73
40 41 2.686816 GCGGCAAACAGGTATGCGT 61.687 57.895 0.00 0.00 43.47 5.24
41 42 1.363145 GCGGCAAACAGGTATGCGTA 61.363 55.000 0.00 0.00 43.47 4.42
42 43 1.080298 CGGCAAACAGGTATGCGTAA 58.920 50.000 0.00 0.00 43.47 3.18
43 44 1.201987 CGGCAAACAGGTATGCGTAAC 60.202 52.381 0.00 0.00 43.47 2.50
44 45 1.807742 GGCAAACAGGTATGCGTAACA 59.192 47.619 3.32 0.00 43.47 2.41
45 46 2.159572 GGCAAACAGGTATGCGTAACAG 60.160 50.000 3.32 0.00 43.47 3.16
46 47 2.727916 GCAAACAGGTATGCGTAACAGC 60.728 50.000 3.32 0.00 32.17 4.40
58 59 5.524511 TGCGTAACAGCATAAGTTGTAAG 57.475 39.130 0.00 0.00 42.92 2.34
59 60 5.231702 TGCGTAACAGCATAAGTTGTAAGA 58.768 37.500 0.00 0.00 42.92 2.10
60 61 5.347635 TGCGTAACAGCATAAGTTGTAAGAG 59.652 40.000 0.00 0.00 42.92 2.85
61 62 5.575606 GCGTAACAGCATAAGTTGTAAGAGA 59.424 40.000 0.00 0.00 38.31 3.10
62 63 6.090358 GCGTAACAGCATAAGTTGTAAGAGAA 59.910 38.462 0.00 0.00 38.31 2.87
63 64 7.445836 CGTAACAGCATAAGTTGTAAGAGAAC 58.554 38.462 0.00 0.00 38.31 3.01
64 65 6.803154 AACAGCATAAGTTGTAAGAGAACC 57.197 37.500 0.00 0.00 38.31 3.62
65 66 5.865085 ACAGCATAAGTTGTAAGAGAACCA 58.135 37.500 0.00 0.00 37.43 3.67
66 67 6.476378 ACAGCATAAGTTGTAAGAGAACCAT 58.524 36.000 0.00 0.00 37.43 3.55
67 68 7.620880 ACAGCATAAGTTGTAAGAGAACCATA 58.379 34.615 0.00 0.00 37.43 2.74
68 69 8.267894 ACAGCATAAGTTGTAAGAGAACCATAT 58.732 33.333 0.00 0.00 37.43 1.78
69 70 8.768955 CAGCATAAGTTGTAAGAGAACCATATC 58.231 37.037 0.00 0.00 0.00 1.63
70 71 8.486210 AGCATAAGTTGTAAGAGAACCATATCA 58.514 33.333 0.00 0.00 0.00 2.15
71 72 9.109393 GCATAAGTTGTAAGAGAACCATATCAA 57.891 33.333 0.00 0.00 0.00 2.57
101 102 7.832503 CAAACTGTTTGTTTTCCTGAAAGAT 57.167 32.000 21.95 0.00 45.69 2.40
102 103 7.678226 CAAACTGTTTGTTTTCCTGAAAGATG 58.322 34.615 21.95 0.00 45.69 2.90
103 104 6.773976 ACTGTTTGTTTTCCTGAAAGATGA 57.226 33.333 0.00 0.00 34.07 2.92
104 105 6.564328 ACTGTTTGTTTTCCTGAAAGATGAC 58.436 36.000 0.00 0.00 34.07 3.06
105 106 5.901552 TGTTTGTTTTCCTGAAAGATGACC 58.098 37.500 0.00 0.00 34.07 4.02
106 107 5.420421 TGTTTGTTTTCCTGAAAGATGACCA 59.580 36.000 0.00 0.00 34.07 4.02
107 108 6.071108 TGTTTGTTTTCCTGAAAGATGACCAA 60.071 34.615 0.00 0.00 34.07 3.67
108 109 5.772825 TGTTTTCCTGAAAGATGACCAAG 57.227 39.130 0.00 0.00 34.07 3.61
109 110 5.200483 TGTTTTCCTGAAAGATGACCAAGT 58.800 37.500 0.00 0.00 34.07 3.16
110 111 5.067674 TGTTTTCCTGAAAGATGACCAAGTG 59.932 40.000 0.00 0.00 34.07 3.16
111 112 2.783135 TCCTGAAAGATGACCAAGTGC 58.217 47.619 0.00 0.00 34.07 4.40
112 113 2.106338 TCCTGAAAGATGACCAAGTGCA 59.894 45.455 0.00 0.00 34.07 4.57
113 114 2.227388 CCTGAAAGATGACCAAGTGCAC 59.773 50.000 9.40 9.40 34.07 4.57
114 115 2.880268 CTGAAAGATGACCAAGTGCACA 59.120 45.455 21.04 0.00 34.07 4.57
115 116 3.286353 TGAAAGATGACCAAGTGCACAA 58.714 40.909 21.04 0.00 0.00 3.33
116 117 3.316029 TGAAAGATGACCAAGTGCACAAG 59.684 43.478 21.04 10.65 0.00 3.16
117 118 2.936919 AGATGACCAAGTGCACAAGA 57.063 45.000 21.04 0.00 0.00 3.02
118 119 2.775890 AGATGACCAAGTGCACAAGAG 58.224 47.619 21.04 7.13 0.00 2.85
119 120 2.369860 AGATGACCAAGTGCACAAGAGA 59.630 45.455 21.04 0.00 0.00 3.10
120 121 2.936919 TGACCAAGTGCACAAGAGAT 57.063 45.000 21.04 0.00 0.00 2.75
121 122 2.771089 TGACCAAGTGCACAAGAGATC 58.229 47.619 21.04 9.05 0.00 2.75
122 123 2.104622 TGACCAAGTGCACAAGAGATCA 59.895 45.455 21.04 11.56 0.00 2.92
123 124 3.244665 TGACCAAGTGCACAAGAGATCAT 60.245 43.478 21.04 0.00 0.00 2.45
124 125 3.079578 ACCAAGTGCACAAGAGATCATG 58.920 45.455 21.04 3.51 0.00 3.07
125 126 2.159421 CCAAGTGCACAAGAGATCATGC 60.159 50.000 21.04 0.00 38.59 4.06
126 127 2.484742 AGTGCACAAGAGATCATGCA 57.515 45.000 21.04 0.00 45.45 3.96
130 131 4.794278 TGCACAAGAGATCATGCATTTT 57.206 36.364 0.00 0.00 42.92 1.82
131 132 5.900865 TGCACAAGAGATCATGCATTTTA 57.099 34.783 0.00 0.00 42.92 1.52
132 133 6.270156 TGCACAAGAGATCATGCATTTTAA 57.730 33.333 0.00 0.00 42.92 1.52
133 134 6.094719 TGCACAAGAGATCATGCATTTTAAC 58.905 36.000 0.00 0.00 42.92 2.01
134 135 6.071784 TGCACAAGAGATCATGCATTTTAACT 60.072 34.615 0.00 0.00 42.92 2.24
135 136 6.810182 GCACAAGAGATCATGCATTTTAACTT 59.190 34.615 0.00 0.00 38.00 2.66
136 137 7.201410 GCACAAGAGATCATGCATTTTAACTTG 60.201 37.037 20.87 20.87 38.00 3.16
137 138 7.811236 CACAAGAGATCATGCATTTTAACTTGT 59.189 33.333 21.73 21.73 42.70 3.16
138 139 8.025445 ACAAGAGATCATGCATTTTAACTTGTC 58.975 33.333 21.73 4.40 39.51 3.18
139 140 7.934855 AGAGATCATGCATTTTAACTTGTCT 57.065 32.000 0.00 0.00 0.00 3.41
140 141 9.453572 AAGAGATCATGCATTTTAACTTGTCTA 57.546 29.630 0.00 0.00 0.00 2.59
141 142 9.624373 AGAGATCATGCATTTTAACTTGTCTAT 57.376 29.630 0.00 0.00 0.00 1.98
280 284 6.816136 ACTTGCAAAAGGTAAGCAACTAAAT 58.184 32.000 0.00 0.00 42.71 1.40
281 285 7.947282 ACTTGCAAAAGGTAAGCAACTAAATA 58.053 30.769 0.00 0.00 42.71 1.40
282 286 8.082242 ACTTGCAAAAGGTAAGCAACTAAATAG 58.918 33.333 0.00 0.00 42.71 1.73
283 287 7.519032 TGCAAAAGGTAAGCAACTAAATAGT 57.481 32.000 0.00 0.00 38.39 2.12
284 288 8.624367 TGCAAAAGGTAAGCAACTAAATAGTA 57.376 30.769 0.00 0.00 34.99 1.82
285 289 8.508875 TGCAAAAGGTAAGCAACTAAATAGTAC 58.491 33.333 0.00 0.00 34.99 2.73
286 290 8.727910 GCAAAAGGTAAGCAACTAAATAGTACT 58.272 33.333 0.00 0.00 34.99 2.73
298 302 9.517609 CAACTAAATAGTACTCTACATGGTCAC 57.482 37.037 0.00 0.00 34.99 3.67
304 308 6.665992 AGTACTCTACATGGTCACTTTTGA 57.334 37.500 0.00 0.00 0.00 2.69
305 309 7.062749 AGTACTCTACATGGTCACTTTTGAA 57.937 36.000 0.00 0.00 31.90 2.69
319 323 7.644157 GGTCACTTTTGAACAACTAGTTTGATC 59.356 37.037 5.07 5.34 41.51 2.92
321 325 9.607988 TCACTTTTGAACAACTAGTTTGATCTA 57.392 29.630 5.07 0.00 41.51 1.98
322 326 9.651718 CACTTTTGAACAACTAGTTTGATCTAC 57.348 33.333 5.07 0.00 41.51 2.59
373 381 8.795786 TTGCAAACAGTAACAAATATGAGTTC 57.204 30.769 0.00 0.00 0.00 3.01
376 384 9.118236 GCAAACAGTAACAAATATGAGTTCTTC 57.882 33.333 0.00 0.00 0.00 2.87
378 386 8.603242 AACAGTAACAAATATGAGTTCTTCGT 57.397 30.769 0.00 0.00 0.00 3.85
384 392 6.644347 ACAAATATGAGTTCTTCGTCAGGAT 58.356 36.000 0.00 0.00 0.00 3.24
393 401 4.046938 TCTTCGTCAGGATCAATAGCAC 57.953 45.455 0.00 0.00 0.00 4.40
413 421 5.179045 CACAGATGCAGGGAAAATACATC 57.821 43.478 0.00 0.00 37.89 3.06
418 430 6.755141 CAGATGCAGGGAAAATACATCAAAAG 59.245 38.462 0.00 0.00 39.64 2.27
422 434 5.654497 CAGGGAAAATACATCAAAAGAGGC 58.346 41.667 0.00 0.00 0.00 4.70
425 437 6.044682 GGGAAAATACATCAAAAGAGGCATG 58.955 40.000 0.00 0.00 0.00 4.06
428 440 7.148018 GGAAAATACATCAAAAGAGGCATGAGA 60.148 37.037 0.00 0.00 0.00 3.27
445 457 5.394443 GCATGAGAGGTTTGCCAATAAATCA 60.394 40.000 0.00 0.00 37.19 2.57
450 462 8.980596 TGAGAGGTTTGCCAATAAATCAATAAT 58.019 29.630 0.00 0.00 37.19 1.28
454 466 9.830975 AGGTTTGCCAATAAATCAATAATAACC 57.169 29.630 0.00 0.00 37.19 2.85
455 467 9.606631 GGTTTGCCAATAAATCAATAATAACCA 57.393 29.630 0.00 0.00 34.09 3.67
467 482 9.875691 AATCAATAATAACCAAGAAAGAAAGGC 57.124 29.630 0.00 0.00 0.00 4.35
472 487 0.385974 CCAAGAAAGAAAGGCGCACG 60.386 55.000 10.83 0.00 0.00 5.34
473 488 0.385974 CAAGAAAGAAAGGCGCACGG 60.386 55.000 10.83 0.00 0.00 4.94
483 498 0.596600 AGGCGCACGGTTGATATACG 60.597 55.000 10.83 0.00 0.00 3.06
564 814 3.319122 ACCTTTTGCTCACTGCCTTTTAG 59.681 43.478 0.00 0.00 42.00 1.85
565 815 3.311966 CTTTTGCTCACTGCCTTTTAGC 58.688 45.455 0.00 0.00 42.00 3.09
575 825 5.477984 TCACTGCCTTTTAGCTCATTGATTT 59.522 36.000 0.00 0.00 0.00 2.17
576 826 5.575606 CACTGCCTTTTAGCTCATTGATTTG 59.424 40.000 0.00 0.00 0.00 2.32
579 832 4.802563 GCCTTTTAGCTCATTGATTTGCTC 59.197 41.667 2.48 0.00 37.02 4.26
586 839 5.947443 AGCTCATTGATTTGCTCAAGTTAC 58.053 37.500 0.00 0.00 46.71 2.50
588 841 5.295431 TCATTGATTTGCTCAAGTTACGG 57.705 39.130 0.00 0.00 46.71 4.02
598 851 3.304391 GCTCAAGTTACGGCATTTTGTCA 60.304 43.478 0.00 0.00 0.00 3.58
627 889 9.485206 CGTAAGGGCAGTACTATATATGTTTTT 57.515 33.333 0.00 0.00 0.00 1.94
630 892 9.561069 AAGGGCAGTACTATATATGTTTTTCAG 57.439 33.333 0.00 0.00 0.00 3.02
631 893 8.934697 AGGGCAGTACTATATATGTTTTTCAGA 58.065 33.333 0.00 0.00 0.00 3.27
632 894 8.989980 GGGCAGTACTATATATGTTTTTCAGAC 58.010 37.037 0.00 0.00 0.00 3.51
633 895 9.542462 GGCAGTACTATATATGTTTTTCAGACA 57.458 33.333 0.00 0.00 0.00 3.41
690 956 7.156876 TCATAAACTCATCCAACAACCAATC 57.843 36.000 0.00 0.00 0.00 2.67
691 957 4.871933 AAACTCATCCAACAACCAATCC 57.128 40.909 0.00 0.00 0.00 3.01
703 969 8.171400 TCCAACAACCAATCCTAAAATAAGGTA 58.829 33.333 0.00 0.00 37.91 3.08
705 971 9.801873 CAACAACCAATCCTAAAATAAGGTATG 57.198 33.333 0.00 0.00 37.91 2.39
725 991 2.158986 TGTCAAGCAAACACAAATGGGG 60.159 45.455 0.00 0.00 0.00 4.96
731 997 1.414866 AAACACAAATGGGGTGGGCC 61.415 55.000 0.00 0.00 40.54 5.80
787 1055 9.699410 TCTGAAAGGAATGTCAAATTGGTATAT 57.301 29.630 0.00 0.00 0.00 0.86
822 1097 5.526506 AGCTTTTGGATAATGGAATCTGC 57.473 39.130 0.00 0.00 0.00 4.26
823 1098 4.037208 AGCTTTTGGATAATGGAATCTGCG 59.963 41.667 0.00 0.00 0.00 5.18
834 1109 1.024271 GAATCTGCGCAGGCCATTAA 58.976 50.000 35.36 16.27 38.85 1.40
850 1126 5.128919 GCCATTAAGGAGACATGTCAGATT 58.871 41.667 27.02 18.63 41.22 2.40
851 1127 6.291377 GCCATTAAGGAGACATGTCAGATTA 58.709 40.000 27.02 17.71 41.22 1.75
885 1161 2.048603 CCCAAGCTAAGCCCAGCAC 61.049 63.158 9.59 0.00 44.35 4.40
895 1171 4.404098 CCCAGCACGTACCCCACC 62.404 72.222 0.00 0.00 0.00 4.61
944 1220 5.191426 ACTGGAAGGATTGATGATTCACTG 58.809 41.667 0.00 0.00 39.30 3.66
954 1230 2.259266 TGATTCACTGCACAAGCTGA 57.741 45.000 0.00 0.00 41.71 4.26
960 1236 1.266175 CACTGCACAAGCTGAAAGGAG 59.734 52.381 0.00 0.00 41.71 3.69
997 1273 1.069204 GCATCGATCAGGTAGCAGGAA 59.931 52.381 0.00 0.00 0.00 3.36
1245 1521 2.420022 GCAACATGATCCGGTATATGGC 59.580 50.000 0.00 1.27 0.00 4.40
1401 1713 2.945447 TAGCAAAACTGATGGCATGC 57.055 45.000 9.90 9.90 0.00 4.06
1402 1714 0.970640 AGCAAAACTGATGGCATGCA 59.029 45.000 21.36 6.13 36.30 3.96
1403 1715 1.067142 AGCAAAACTGATGGCATGCAG 60.067 47.619 21.36 18.96 36.30 4.41
1411 1723 1.271488 TGATGGCATGCAGTGTTCTCA 60.271 47.619 21.36 5.70 0.00 3.27
1432 1744 4.332543 TCATAGGTTGTAAATCTGCAAGCG 59.667 41.667 0.00 0.00 46.46 4.68
1516 1828 4.081420 TCAAGCCCTGAAGAAGACAGTATC 60.081 45.833 0.00 0.00 34.04 2.24
1564 1876 0.255890 GGGAAGCTAGGATGCCACAA 59.744 55.000 0.00 0.00 0.00 3.33
1614 1935 2.159226 AGAGCTACTTCGGAAATGACGG 60.159 50.000 0.00 0.00 0.00 4.79
1619 1940 0.378257 CTTCGGAAATGACGGCATGG 59.622 55.000 3.39 0.00 34.26 3.66
1680 2004 4.092821 CAGTTCACATGTATACACAACCGG 59.907 45.833 7.96 0.00 38.42 5.28
1733 2063 1.423541 ACAGTAGCACCATGTTTCCCA 59.576 47.619 0.00 0.00 0.00 4.37
1785 2116 2.438021 GGTATTATGACACTGAGGGCCA 59.562 50.000 6.18 0.00 0.00 5.36
1826 2261 5.447818 GCATATTTCAACTAGGTGTCACAGC 60.448 44.000 7.85 0.00 0.00 4.40
1827 2262 3.552132 TTTCAACTAGGTGTCACAGCA 57.448 42.857 10.19 0.00 33.95 4.41
1828 2263 3.769739 TTCAACTAGGTGTCACAGCAT 57.230 42.857 10.19 0.00 33.95 3.79
1829 2264 3.044235 TCAACTAGGTGTCACAGCATG 57.956 47.619 10.19 3.76 46.00 4.06
1957 2410 1.740025 GCTGAATCAAGCAGGGTGTAC 59.260 52.381 0.00 0.00 43.01 2.90
2009 5203 3.825308 TGAAATGCTTCATCGTGCTTTC 58.175 40.909 0.00 0.00 36.62 2.62
2047 5300 1.799544 CAAGCCAGGCATTTGGTTTC 58.200 50.000 15.80 0.00 39.31 2.78
2054 5307 1.139163 GGCATTTGGTTTCGTGCAAG 58.861 50.000 0.00 0.00 39.27 4.01
2062 5315 1.385999 GTTTCGTGCAAGCGAGAAAC 58.614 50.000 20.69 20.69 43.35 2.78
2065 5318 0.581529 TCGTGCAAGCGAGAAACAAG 59.418 50.000 0.00 0.00 35.83 3.16
2068 5321 2.376032 GTGCAAGCGAGAAACAAGTTC 58.624 47.619 0.00 0.00 36.38 3.01
2112 5365 2.289547 ACATTGTAGTTTGTCGTGTGGC 59.710 45.455 0.00 0.00 0.00 5.01
2113 5366 2.319136 TTGTAGTTTGTCGTGTGGCT 57.681 45.000 0.00 0.00 0.00 4.75
2114 5367 1.577468 TGTAGTTTGTCGTGTGGCTG 58.423 50.000 0.00 0.00 0.00 4.85
2117 5370 1.822186 GTTTGTCGTGTGGCTGGGT 60.822 57.895 0.00 0.00 0.00 4.51
2118 5371 1.821759 TTTGTCGTGTGGCTGGGTG 60.822 57.895 0.00 0.00 0.00 4.61
2119 5372 2.544590 TTTGTCGTGTGGCTGGGTGT 62.545 55.000 0.00 0.00 0.00 4.16
2120 5373 2.665185 GTCGTGTGGCTGGGTGTC 60.665 66.667 0.00 0.00 0.00 3.67
2121 5374 3.936203 TCGTGTGGCTGGGTGTCC 61.936 66.667 0.00 0.00 0.00 4.02
2124 5377 1.454847 GTGTGGCTGGGTGTCCAAA 60.455 57.895 0.00 0.00 43.51 3.28
2125 5378 1.152777 TGTGGCTGGGTGTCCAAAG 60.153 57.895 0.00 0.00 43.51 2.77
2129 5382 1.150536 GCTGGGTGTCCAAAGTCCA 59.849 57.895 0.00 0.00 43.51 4.02
2131 5384 2.026905 GCTGGGTGTCCAAAGTCCAAA 61.027 52.381 0.00 0.00 43.51 3.28
2132 5385 1.681264 CTGGGTGTCCAAAGTCCAAAC 59.319 52.381 0.00 0.00 43.51 2.93
2133 5386 0.666374 GGGTGTCCAAAGTCCAAACG 59.334 55.000 0.00 0.00 0.00 3.60
2135 5388 2.227194 GGTGTCCAAAGTCCAAACGAT 58.773 47.619 0.00 0.00 0.00 3.73
2136 5389 3.404899 GGTGTCCAAAGTCCAAACGATA 58.595 45.455 0.00 0.00 0.00 2.92
2139 5392 3.007635 GTCCAAAGTCCAAACGATAGGG 58.992 50.000 0.00 0.00 43.77 3.53
2142 5395 3.877508 CCAAAGTCCAAACGATAGGGATC 59.122 47.826 0.00 0.00 43.77 3.36
2158 5411 4.398319 AGGGATCGAAAAAGAAAGAAGCA 58.602 39.130 0.00 0.00 0.00 3.91
2159 5412 4.827284 AGGGATCGAAAAAGAAAGAAGCAA 59.173 37.500 0.00 0.00 0.00 3.91
2161 5414 5.507315 GGGATCGAAAAAGAAAGAAGCAACA 60.507 40.000 0.00 0.00 0.00 3.33
2164 5417 6.130298 TCGAAAAAGAAAGAAGCAACATCA 57.870 33.333 0.00 0.00 0.00 3.07
2165 5418 6.559810 TCGAAAAAGAAAGAAGCAACATCAA 58.440 32.000 0.00 0.00 0.00 2.57
2166 5419 6.472163 TCGAAAAAGAAAGAAGCAACATCAAC 59.528 34.615 0.00 0.00 0.00 3.18
2168 5421 7.514125 CGAAAAAGAAAGAAGCAACATCAACTG 60.514 37.037 0.00 0.00 0.00 3.16
2169 5422 4.843220 AGAAAGAAGCAACATCAACTGG 57.157 40.909 0.00 0.00 0.00 4.00
2170 5423 3.005155 AGAAAGAAGCAACATCAACTGGC 59.995 43.478 0.00 0.00 0.00 4.85
2171 5424 2.283145 AGAAGCAACATCAACTGGCT 57.717 45.000 0.00 0.00 36.13 4.75
2172 5425 1.884579 AGAAGCAACATCAACTGGCTG 59.115 47.619 0.00 0.00 34.56 4.85
2173 5426 0.963962 AAGCAACATCAACTGGCTGG 59.036 50.000 0.00 0.00 34.56 4.85
2174 5427 0.111061 AGCAACATCAACTGGCTGGA 59.889 50.000 0.00 0.00 32.76 3.86
2178 5431 3.383761 CAACATCAACTGGCTGGAAAAC 58.616 45.455 0.00 0.00 0.00 2.43
2180 5433 1.608590 CATCAACTGGCTGGAAAACGT 59.391 47.619 0.00 0.00 0.00 3.99
2181 5434 2.623878 TCAACTGGCTGGAAAACGTA 57.376 45.000 0.00 0.00 0.00 3.57
2183 5436 1.070175 CAACTGGCTGGAAAACGTACG 60.070 52.381 15.01 15.01 0.00 3.67
2185 5438 0.788391 CTGGCTGGAAAACGTACGAC 59.212 55.000 24.41 9.81 0.00 4.34
2186 5439 0.104487 TGGCTGGAAAACGTACGACA 59.896 50.000 24.41 11.11 0.00 4.35
2187 5440 0.509929 GGCTGGAAAACGTACGACAC 59.490 55.000 24.41 9.80 0.00 3.67
2189 5442 1.191647 GCTGGAAAACGTACGACACTG 59.808 52.381 24.41 11.49 0.00 3.66
2190 5443 2.734670 CTGGAAAACGTACGACACTGA 58.265 47.619 24.41 0.41 0.00 3.41
2191 5444 2.462889 TGGAAAACGTACGACACTGAC 58.537 47.619 24.41 6.26 0.00 3.51
2192 5445 2.099592 TGGAAAACGTACGACACTGACT 59.900 45.455 24.41 0.00 0.00 3.41
2193 5446 2.470257 GGAAAACGTACGACACTGACTG 59.530 50.000 24.41 0.00 0.00 3.51
2194 5447 1.484356 AAACGTACGACACTGACTGC 58.516 50.000 24.41 0.00 0.00 4.40
2197 5450 1.053048 CGTACGACACTGACTGCAAG 58.947 55.000 10.44 0.00 42.29 4.01
2198 5451 1.419374 GTACGACACTGACTGCAAGG 58.581 55.000 0.00 0.00 39.30 3.61
2199 5452 1.000607 GTACGACACTGACTGCAAGGA 60.001 52.381 0.00 0.00 39.30 3.36
2200 5453 0.249489 ACGACACTGACTGCAAGGAC 60.249 55.000 0.00 0.00 39.30 3.85
2202 5455 1.606480 CGACACTGACTGCAAGGACAT 60.606 52.381 0.00 0.00 39.30 3.06
2203 5456 1.802960 GACACTGACTGCAAGGACATG 59.197 52.381 0.00 0.00 39.30 3.21
2204 5457 1.417517 ACACTGACTGCAAGGACATGA 59.582 47.619 0.00 0.00 39.30 3.07
2205 5458 2.158769 ACACTGACTGCAAGGACATGAA 60.159 45.455 0.00 0.00 39.30 2.57
2206 5459 2.880268 CACTGACTGCAAGGACATGAAA 59.120 45.455 0.00 0.00 39.30 2.69
2207 5460 2.880890 ACTGACTGCAAGGACATGAAAC 59.119 45.455 0.00 0.00 39.30 2.78
2209 5462 2.880268 TGACTGCAAGGACATGAAACAG 59.120 45.455 0.00 0.69 39.30 3.16
2211 5464 1.610038 CTGCAAGGACATGAAACAGCA 59.390 47.619 0.00 3.20 0.00 4.41
2212 5465 2.030371 TGCAAGGACATGAAACAGCAA 58.970 42.857 0.00 0.00 0.00 3.91
2213 5466 2.429971 TGCAAGGACATGAAACAGCAAA 59.570 40.909 0.00 0.00 0.00 3.68
2214 5467 3.054878 GCAAGGACATGAAACAGCAAAG 58.945 45.455 0.00 0.00 0.00 2.77
2217 5470 2.694628 AGGACATGAAACAGCAAAGCAA 59.305 40.909 0.00 0.00 0.00 3.91
2218 5471 3.132646 AGGACATGAAACAGCAAAGCAAA 59.867 39.130 0.00 0.00 0.00 3.68
2219 5472 3.870419 GGACATGAAACAGCAAAGCAAAA 59.130 39.130 0.00 0.00 0.00 2.44
2220 5473 4.260334 GGACATGAAACAGCAAAGCAAAAC 60.260 41.667 0.00 0.00 0.00 2.43
2221 5474 4.252073 ACATGAAACAGCAAAGCAAAACA 58.748 34.783 0.00 0.00 0.00 2.83
2223 5476 6.047870 ACATGAAACAGCAAAGCAAAACATA 58.952 32.000 0.00 0.00 0.00 2.29
2224 5477 6.538021 ACATGAAACAGCAAAGCAAAACATAA 59.462 30.769 0.00 0.00 0.00 1.90
2225 5478 6.343226 TGAAACAGCAAAGCAAAACATAAC 57.657 33.333 0.00 0.00 0.00 1.89
2226 5479 5.871524 TGAAACAGCAAAGCAAAACATAACA 59.128 32.000 0.00 0.00 0.00 2.41
2229 5482 4.805192 ACAGCAAAGCAAAACATAACAGTG 59.195 37.500 0.00 0.00 0.00 3.66
2230 5483 5.042593 CAGCAAAGCAAAACATAACAGTGA 58.957 37.500 0.00 0.00 0.00 3.41
2231 5484 5.693104 CAGCAAAGCAAAACATAACAGTGAT 59.307 36.000 0.00 0.00 0.00 3.06
2232 5485 5.693104 AGCAAAGCAAAACATAACAGTGATG 59.307 36.000 0.00 0.00 0.00 3.07
2233 5486 5.463061 GCAAAGCAAAACATAACAGTGATGT 59.537 36.000 0.00 0.00 39.22 3.06
2234 5487 6.562640 GCAAAGCAAAACATAACAGTGATGTG 60.563 38.462 4.08 0.00 37.59 3.21
2235 5488 6.389830 AAGCAAAACATAACAGTGATGTGA 57.610 33.333 4.08 0.00 37.59 3.58
2236 5489 6.579666 AGCAAAACATAACAGTGATGTGAT 57.420 33.333 4.08 0.00 37.59 3.06
2237 5490 6.384224 AGCAAAACATAACAGTGATGTGATG 58.616 36.000 4.08 7.89 37.59 3.07
2239 5492 6.680810 CAAAACATAACAGTGATGTGATGGT 58.319 36.000 4.08 1.07 37.59 3.55
2241 5494 4.264253 ACATAACAGTGATGTGATGGTGG 58.736 43.478 2.27 0.00 36.18 4.61
2243 5496 2.775911 ACAGTGATGTGATGGTGGAG 57.224 50.000 0.00 0.00 0.00 3.86
2244 5497 1.339438 ACAGTGATGTGATGGTGGAGC 60.339 52.381 0.00 0.00 0.00 4.70
2246 5499 1.632409 AGTGATGTGATGGTGGAGCTT 59.368 47.619 0.00 0.00 0.00 3.74
2247 5500 2.840038 AGTGATGTGATGGTGGAGCTTA 59.160 45.455 0.00 0.00 0.00 3.09
2248 5501 3.457380 AGTGATGTGATGGTGGAGCTTAT 59.543 43.478 0.00 0.00 0.00 1.73
2256 5573 4.411869 TGATGGTGGAGCTTATGATGGTTA 59.588 41.667 0.00 0.00 0.00 2.85
2258 5575 4.717877 TGGTGGAGCTTATGATGGTTATG 58.282 43.478 0.00 0.00 0.00 1.90
2259 5576 4.411869 TGGTGGAGCTTATGATGGTTATGA 59.588 41.667 0.00 0.00 0.00 2.15
2260 5577 4.999950 GGTGGAGCTTATGATGGTTATGAG 59.000 45.833 0.00 0.00 0.00 2.90
2262 5579 4.006319 GGAGCTTATGATGGTTATGAGGC 58.994 47.826 0.00 0.00 0.00 4.70
2267 5584 7.408543 AGCTTATGATGGTTATGAGGCATTAT 58.591 34.615 0.00 0.00 0.00 1.28
2287 5639 0.036388 GAGGCATTCCGTCCAACAGA 60.036 55.000 0.00 0.00 37.47 3.41
2289 5641 0.734889 GGCATTCCGTCCAACAGATG 59.265 55.000 0.00 0.00 0.00 2.90
2303 5655 4.520179 CAACAGATGGAGTTCATGATGGA 58.480 43.478 0.00 0.00 35.97 3.41
2314 5666 5.628130 AGTTCATGATGGATGATACTTGGG 58.372 41.667 0.00 0.00 40.92 4.12
2315 5667 5.370584 AGTTCATGATGGATGATACTTGGGA 59.629 40.000 0.00 0.00 40.92 4.37
2316 5668 5.494390 TCATGATGGATGATACTTGGGAG 57.506 43.478 0.00 0.00 36.06 4.30
2317 5669 4.909695 TCATGATGGATGATACTTGGGAGT 59.090 41.667 0.00 0.00 36.06 3.85
2318 5670 4.694760 TGATGGATGATACTTGGGAGTG 57.305 45.455 0.00 0.00 36.60 3.51
2319 5671 4.297768 TGATGGATGATACTTGGGAGTGA 58.702 43.478 0.00 0.00 36.60 3.41
2320 5672 4.346127 TGATGGATGATACTTGGGAGTGAG 59.654 45.833 0.00 0.00 36.60 3.51
2322 5674 3.041946 GGATGATACTTGGGAGTGAGGT 58.958 50.000 0.00 0.00 36.60 3.85
2323 5675 4.223953 GGATGATACTTGGGAGTGAGGTA 58.776 47.826 0.00 0.00 36.60 3.08
2324 5676 4.282195 GGATGATACTTGGGAGTGAGGTAG 59.718 50.000 0.00 0.00 36.60 3.18
2326 5678 1.861982 TACTTGGGAGTGAGGTAGGC 58.138 55.000 0.00 0.00 36.60 3.93
2327 5679 1.258445 ACTTGGGAGTGAGGTAGGCG 61.258 60.000 0.00 0.00 33.99 5.52
2376 5734 3.514645 GGTTGCATTTTCATAGTGCTGG 58.485 45.455 0.00 0.00 39.52 4.85
2390 5748 2.753043 CTGGCAGGCGAGGCATTT 60.753 61.111 6.61 0.00 43.56 2.32
2403 5761 3.085208 GCATTTCGCCTCCATCTCA 57.915 52.632 0.00 0.00 32.94 3.27
2404 5762 0.942962 GCATTTCGCCTCCATCTCAG 59.057 55.000 0.00 0.00 32.94 3.35
2405 5763 1.590932 CATTTCGCCTCCATCTCAGG 58.409 55.000 0.00 0.00 0.00 3.86
2410 5768 3.136750 CCTCCATCTCAGGCTCCG 58.863 66.667 0.00 0.00 0.00 4.63
2411 5769 1.456518 CCTCCATCTCAGGCTCCGA 60.457 63.158 0.00 0.00 0.00 4.55
2412 5770 1.739049 CTCCATCTCAGGCTCCGAC 59.261 63.158 0.00 0.00 0.00 4.79
2413 5771 2.069465 CTCCATCTCAGGCTCCGACG 62.069 65.000 0.00 0.00 0.00 5.12
2414 5772 2.279120 CATCTCAGGCTCCGACGC 60.279 66.667 0.00 0.00 0.00 5.19
2441 5799 2.513897 CCGGAGGCGGGATTCAAC 60.514 66.667 0.00 0.00 46.14 3.18
2442 5800 2.890474 CGGAGGCGGGATTCAACG 60.890 66.667 0.00 0.00 0.00 4.10
2443 5801 2.267961 GGAGGCGGGATTCAACGT 59.732 61.111 0.00 0.00 0.00 3.99
2444 5802 2.106683 GGAGGCGGGATTCAACGTG 61.107 63.158 0.00 0.00 0.00 4.49
2445 5803 2.046314 AGGCGGGATTCAACGTGG 60.046 61.111 0.00 0.00 0.00 4.94
2446 5804 3.810896 GGCGGGATTCAACGTGGC 61.811 66.667 0.00 0.00 0.00 5.01
2447 5805 2.746277 GCGGGATTCAACGTGGCT 60.746 61.111 0.00 0.00 0.00 4.75
2448 5806 3.039202 GCGGGATTCAACGTGGCTG 62.039 63.158 0.00 0.00 0.00 4.85
2449 5807 2.398554 CGGGATTCAACGTGGCTGG 61.399 63.158 0.00 0.00 0.00 4.85
2450 5808 2.700773 GGGATTCAACGTGGCTGGC 61.701 63.158 0.00 0.00 0.00 4.85
2451 5809 1.675641 GGATTCAACGTGGCTGGCT 60.676 57.895 2.00 0.00 0.00 4.75
2452 5810 1.503542 GATTCAACGTGGCTGGCTG 59.496 57.895 2.00 0.00 0.00 4.85
2453 5811 1.926511 GATTCAACGTGGCTGGCTGG 61.927 60.000 2.00 0.00 0.00 4.85
2477 5835 2.111460 GGCACAACACCCGTGGTA 59.889 61.111 0.00 0.00 32.11 3.25
2478 5836 1.964373 GGCACAACACCCGTGGTAG 60.964 63.158 0.00 0.00 32.11 3.18
2479 5837 1.227734 GCACAACACCCGTGGTAGT 60.228 57.895 0.00 0.00 32.11 2.73
2480 5838 0.033781 GCACAACACCCGTGGTAGTA 59.966 55.000 0.00 0.00 32.11 1.82
2481 5839 1.938016 GCACAACACCCGTGGTAGTAG 60.938 57.143 0.00 0.00 32.11 2.57
2482 5840 1.342174 CACAACACCCGTGGTAGTAGT 59.658 52.381 0.00 0.00 32.11 2.73
2483 5841 2.557924 CACAACACCCGTGGTAGTAGTA 59.442 50.000 0.00 0.00 32.11 1.82
2484 5842 3.194116 CACAACACCCGTGGTAGTAGTAT 59.806 47.826 0.00 0.00 32.11 2.12
2485 5843 3.194116 ACAACACCCGTGGTAGTAGTATG 59.806 47.826 0.00 0.00 32.11 2.39
2486 5844 2.381911 ACACCCGTGGTAGTAGTATGG 58.618 52.381 0.00 0.00 32.11 2.74
2487 5845 1.684983 CACCCGTGGTAGTAGTATGGG 59.315 57.143 8.65 8.65 44.58 4.00
2488 5846 0.677842 CCCGTGGTAGTAGTATGGGC 59.322 60.000 0.00 0.00 34.11 5.36
2489 5847 0.677842 CCGTGGTAGTAGTATGGGCC 59.322 60.000 0.00 0.00 0.00 5.80
2490 5848 1.700955 CGTGGTAGTAGTATGGGCCT 58.299 55.000 4.53 0.00 0.00 5.19
2491 5849 2.489619 CCGTGGTAGTAGTATGGGCCTA 60.490 54.545 4.53 0.00 0.00 3.93
2492 5850 3.428532 CGTGGTAGTAGTATGGGCCTAT 58.571 50.000 6.88 6.88 0.00 2.57
2493 5851 3.442977 CGTGGTAGTAGTATGGGCCTATC 59.557 52.174 4.16 0.00 0.00 2.08
2494 5852 4.675038 GTGGTAGTAGTATGGGCCTATCT 58.325 47.826 4.16 5.60 0.00 1.98
2495 5853 5.572271 CGTGGTAGTAGTATGGGCCTATCTA 60.572 48.000 4.16 4.57 0.00 1.98
2496 5854 5.651576 GTGGTAGTAGTATGGGCCTATCTAC 59.348 48.000 20.92 20.92 33.46 2.59
2497 5855 4.880696 GGTAGTAGTATGGGCCTATCTACG 59.119 50.000 21.60 0.00 36.91 3.51
2498 5856 3.965694 AGTAGTATGGGCCTATCTACGG 58.034 50.000 21.60 0.00 36.91 4.02
2499 5857 2.233305 AGTATGGGCCTATCTACGGG 57.767 55.000 4.16 0.00 0.00 5.28
2500 5858 1.192428 GTATGGGCCTATCTACGGGG 58.808 60.000 4.16 0.00 0.00 5.73
2501 5859 1.086565 TATGGGCCTATCTACGGGGA 58.913 55.000 4.16 0.00 0.00 4.81
2502 5860 0.252284 ATGGGCCTATCTACGGGGAG 60.252 60.000 4.53 0.00 0.00 4.30
2503 5861 2.284276 GGGCCTATCTACGGGGAGC 61.284 68.421 0.84 0.00 0.00 4.70
2504 5862 2.637383 GGCCTATCTACGGGGAGCG 61.637 68.421 0.00 0.00 0.00 5.03
2505 5863 2.637383 GCCTATCTACGGGGAGCGG 61.637 68.421 0.00 0.00 0.00 5.52
2506 5864 2.637383 CCTATCTACGGGGAGCGGC 61.637 68.421 0.00 0.00 0.00 6.53
2507 5865 1.604023 CTATCTACGGGGAGCGGCT 60.604 63.158 0.00 0.00 0.00 5.52
2508 5866 0.322277 CTATCTACGGGGAGCGGCTA 60.322 60.000 0.60 0.00 0.00 3.93
2509 5867 0.330604 TATCTACGGGGAGCGGCTAT 59.669 55.000 0.60 0.00 0.00 2.97
2510 5868 1.251527 ATCTACGGGGAGCGGCTATG 61.252 60.000 0.60 0.00 0.00 2.23
2511 5869 2.123597 TACGGGGAGCGGCTATGT 60.124 61.111 0.60 1.70 0.00 2.29
2512 5870 2.143594 CTACGGGGAGCGGCTATGTC 62.144 65.000 0.60 0.00 0.00 3.06
2513 5871 2.635787 TACGGGGAGCGGCTATGTCT 62.636 60.000 0.60 0.00 0.00 3.41
2514 5872 2.423446 GGGGAGCGGCTATGTCTG 59.577 66.667 0.60 0.00 0.00 3.51
2515 5873 2.435693 GGGGAGCGGCTATGTCTGT 61.436 63.158 0.60 0.00 0.00 3.41
2516 5874 1.068250 GGGAGCGGCTATGTCTGTC 59.932 63.158 0.60 0.00 0.00 3.51
2517 5875 1.395826 GGGAGCGGCTATGTCTGTCT 61.396 60.000 0.60 0.00 0.00 3.41
2518 5876 0.031449 GGAGCGGCTATGTCTGTCTC 59.969 60.000 0.60 0.00 0.00 3.36
2519 5877 0.741326 GAGCGGCTATGTCTGTCTCA 59.259 55.000 0.60 0.00 0.00 3.27
2520 5878 0.457851 AGCGGCTATGTCTGTCTCAC 59.542 55.000 0.00 0.00 0.00 3.51
2521 5879 0.528684 GCGGCTATGTCTGTCTCACC 60.529 60.000 0.00 0.00 0.00 4.02
2522 5880 1.107114 CGGCTATGTCTGTCTCACCT 58.893 55.000 0.00 0.00 0.00 4.00
2523 5881 1.478510 CGGCTATGTCTGTCTCACCTT 59.521 52.381 0.00 0.00 0.00 3.50
2524 5882 2.093973 CGGCTATGTCTGTCTCACCTTT 60.094 50.000 0.00 0.00 0.00 3.11
2525 5883 3.617531 CGGCTATGTCTGTCTCACCTTTT 60.618 47.826 0.00 0.00 0.00 2.27
2526 5884 4.381612 CGGCTATGTCTGTCTCACCTTTTA 60.382 45.833 0.00 0.00 0.00 1.52
2527 5885 5.112686 GGCTATGTCTGTCTCACCTTTTAG 58.887 45.833 0.00 0.00 0.00 1.85
2528 5886 5.105310 GGCTATGTCTGTCTCACCTTTTAGA 60.105 44.000 0.00 0.00 0.00 2.10
2529 5887 6.039616 GCTATGTCTGTCTCACCTTTTAGAG 58.960 44.000 0.00 0.00 0.00 2.43
2530 5888 6.127591 GCTATGTCTGTCTCACCTTTTAGAGA 60.128 42.308 0.00 0.00 38.49 3.10
2531 5889 5.713792 TGTCTGTCTCACCTTTTAGAGAG 57.286 43.478 0.00 0.00 41.23 3.20
2532 5890 4.021894 TGTCTGTCTCACCTTTTAGAGAGC 60.022 45.833 0.00 0.00 41.23 4.09
2533 5891 4.219725 GTCTGTCTCACCTTTTAGAGAGCT 59.780 45.833 0.00 0.00 41.23 4.09
2534 5892 4.835615 TCTGTCTCACCTTTTAGAGAGCTT 59.164 41.667 0.00 0.00 41.23 3.74
2535 5893 5.305644 TCTGTCTCACCTTTTAGAGAGCTTT 59.694 40.000 0.00 0.00 41.23 3.51
2536 5894 5.930135 TGTCTCACCTTTTAGAGAGCTTTT 58.070 37.500 0.00 0.00 41.23 2.27
2537 5895 5.760253 TGTCTCACCTTTTAGAGAGCTTTTG 59.240 40.000 0.00 0.00 41.23 2.44
2538 5896 5.180304 GTCTCACCTTTTAGAGAGCTTTTGG 59.820 44.000 0.00 0.00 41.23 3.28
2539 5897 5.048846 TCACCTTTTAGAGAGCTTTTGGT 57.951 39.130 0.00 0.00 0.00 3.67
2540 5898 5.445964 TCACCTTTTAGAGAGCTTTTGGTT 58.554 37.500 0.00 0.00 0.00 3.67
2541 5899 5.891551 TCACCTTTTAGAGAGCTTTTGGTTT 59.108 36.000 0.00 0.00 0.00 3.27
2542 5900 6.379988 TCACCTTTTAGAGAGCTTTTGGTTTT 59.620 34.615 0.00 0.00 0.00 2.43
2543 5901 7.041721 CACCTTTTAGAGAGCTTTTGGTTTTT 58.958 34.615 0.00 0.00 0.00 1.94
2544 5902 7.222805 CACCTTTTAGAGAGCTTTTGGTTTTTC 59.777 37.037 0.00 0.00 0.00 2.29
2545 5903 7.124298 ACCTTTTAGAGAGCTTTTGGTTTTTCT 59.876 33.333 0.00 0.00 0.00 2.52
2546 5904 7.981789 CCTTTTAGAGAGCTTTTGGTTTTTCTT 59.018 33.333 0.00 0.00 0.00 2.52
2547 5905 9.371136 CTTTTAGAGAGCTTTTGGTTTTTCTTT 57.629 29.630 0.00 0.00 0.00 2.52
2548 5906 9.719355 TTTTAGAGAGCTTTTGGTTTTTCTTTT 57.281 25.926 0.00 0.00 0.00 2.27
2549 5907 8.926715 TTAGAGAGCTTTTGGTTTTTCTTTTC 57.073 30.769 0.00 0.00 0.00 2.29
2550 5908 7.175347 AGAGAGCTTTTGGTTTTTCTTTTCT 57.825 32.000 0.00 0.00 0.00 2.52
2551 5909 7.615403 AGAGAGCTTTTGGTTTTTCTTTTCTT 58.385 30.769 0.00 0.00 0.00 2.52
2552 5910 8.097038 AGAGAGCTTTTGGTTTTTCTTTTCTTT 58.903 29.630 0.00 0.00 0.00 2.52
2553 5911 8.621532 AGAGCTTTTGGTTTTTCTTTTCTTTT 57.378 26.923 0.00 0.00 0.00 2.27
2554 5912 8.721478 AGAGCTTTTGGTTTTTCTTTTCTTTTC 58.279 29.630 0.00 0.00 0.00 2.29
2555 5913 8.621532 AGCTTTTGGTTTTTCTTTTCTTTTCT 57.378 26.923 0.00 0.00 0.00 2.52
2556 5914 8.721478 AGCTTTTGGTTTTTCTTTTCTTTTCTC 58.279 29.630 0.00 0.00 0.00 2.87
2557 5915 8.721478 GCTTTTGGTTTTTCTTTTCTTTTCTCT 58.279 29.630 0.00 0.00 0.00 3.10
2559 5917 9.554395 TTTTGGTTTTTCTTTTCTTTTCTCTGT 57.446 25.926 0.00 0.00 0.00 3.41
2560 5918 9.554395 TTTGGTTTTTCTTTTCTTTTCTCTGTT 57.446 25.926 0.00 0.00 0.00 3.16
2561 5919 9.554395 TTGGTTTTTCTTTTCTTTTCTCTGTTT 57.446 25.926 0.00 0.00 0.00 2.83
2562 5920 9.554395 TGGTTTTTCTTTTCTTTTCTCTGTTTT 57.446 25.926 0.00 0.00 0.00 2.43
2569 5927 9.901172 TCTTTTCTTTTCTCTGTTTTACTACCT 57.099 29.630 0.00 0.00 0.00 3.08
2571 5929 8.672823 TTTCTTTTCTCTGTTTTACTACCTCC 57.327 34.615 0.00 0.00 0.00 4.30
2572 5930 7.369551 TCTTTTCTCTGTTTTACTACCTCCA 57.630 36.000 0.00 0.00 0.00 3.86
2573 5931 7.974504 TCTTTTCTCTGTTTTACTACCTCCAT 58.025 34.615 0.00 0.00 0.00 3.41
2574 5932 8.437575 TCTTTTCTCTGTTTTACTACCTCCATT 58.562 33.333 0.00 0.00 0.00 3.16
2575 5933 8.617290 TTTTCTCTGTTTTACTACCTCCATTC 57.383 34.615 0.00 0.00 0.00 2.67
2576 5934 6.295719 TCTCTGTTTTACTACCTCCATTCC 57.704 41.667 0.00 0.00 0.00 3.01
2577 5935 6.023603 TCTCTGTTTTACTACCTCCATTCCT 58.976 40.000 0.00 0.00 0.00 3.36
2578 5936 7.186972 TCTCTGTTTTACTACCTCCATTCCTA 58.813 38.462 0.00 0.00 0.00 2.94
2579 5937 7.676893 TCTCTGTTTTACTACCTCCATTCCTAA 59.323 37.037 0.00 0.00 0.00 2.69
2580 5938 8.209802 TCTGTTTTACTACCTCCATTCCTAAA 57.790 34.615 0.00 0.00 0.00 1.85
2581 5939 8.832735 TCTGTTTTACTACCTCCATTCCTAAAT 58.167 33.333 0.00 0.00 0.00 1.40
2592 5950 9.322769 ACCTCCATTCCTAAATATATAAGACGT 57.677 33.333 0.00 0.00 0.00 4.34
2595 5953 9.938280 TCCATTCCTAAATATATAAGACGTTGG 57.062 33.333 0.00 0.00 0.00 3.77
2596 5954 9.162764 CCATTCCTAAATATATAAGACGTTGGG 57.837 37.037 0.00 0.00 0.00 4.12
2597 5955 9.162764 CATTCCTAAATATATAAGACGTTGGGG 57.837 37.037 0.00 0.00 0.00 4.96
2598 5956 6.704310 TCCTAAATATATAAGACGTTGGGGC 58.296 40.000 0.00 0.00 0.00 5.80
2599 5957 6.270463 TCCTAAATATATAAGACGTTGGGGCA 59.730 38.462 0.00 0.00 0.00 5.36
2600 5958 6.594159 CCTAAATATATAAGACGTTGGGGCAG 59.406 42.308 0.00 0.00 0.00 4.85
2601 5959 5.562298 AATATATAAGACGTTGGGGCAGT 57.438 39.130 0.00 0.00 0.00 4.40
2602 5960 3.926058 ATATAAGACGTTGGGGCAGTT 57.074 42.857 0.00 0.00 0.00 3.16
2603 5961 2.579410 ATAAGACGTTGGGGCAGTTT 57.421 45.000 0.00 0.00 0.00 2.66
2604 5962 1.886886 TAAGACGTTGGGGCAGTTTC 58.113 50.000 0.00 0.00 0.00 2.78
2605 5963 0.106918 AAGACGTTGGGGCAGTTTCA 60.107 50.000 0.00 0.00 0.00 2.69
2606 5964 0.106918 AGACGTTGGGGCAGTTTCAA 60.107 50.000 0.00 0.00 0.00 2.69
2607 5965 0.958822 GACGTTGGGGCAGTTTCAAT 59.041 50.000 0.00 0.00 0.00 2.57
2608 5966 1.339929 GACGTTGGGGCAGTTTCAATT 59.660 47.619 0.00 0.00 0.00 2.32
2609 5967 2.554893 GACGTTGGGGCAGTTTCAATTA 59.445 45.455 0.00 0.00 0.00 1.40
2610 5968 2.959707 ACGTTGGGGCAGTTTCAATTAA 59.040 40.909 0.00 0.00 0.00 1.40
2611 5969 3.385111 ACGTTGGGGCAGTTTCAATTAAA 59.615 39.130 0.00 0.00 0.00 1.52
2612 5970 3.738791 CGTTGGGGCAGTTTCAATTAAAC 59.261 43.478 0.00 0.00 46.61 2.01
2624 5982 7.548673 GTTTCAATTAAACATCTCCAACGTC 57.451 36.000 0.00 0.00 45.72 4.34
2625 5983 7.360361 GTTTCAATTAAACATCTCCAACGTCT 58.640 34.615 0.00 0.00 45.72 4.18
2626 5984 7.504924 TTCAATTAAACATCTCCAACGTCTT 57.495 32.000 0.00 0.00 0.00 3.01
2627 5985 8.610248 TTCAATTAAACATCTCCAACGTCTTA 57.390 30.769 0.00 0.00 0.00 2.10
2628 5986 8.786826 TCAATTAAACATCTCCAACGTCTTAT 57.213 30.769 0.00 0.00 0.00 1.73
2629 5987 9.878667 TCAATTAAACATCTCCAACGTCTTATA 57.121 29.630 0.00 0.00 0.00 0.98
2634 5992 8.786826 AAACATCTCCAACGTCTTATATTTCA 57.213 30.769 0.00 0.00 0.00 2.69
2635 5993 8.786826 AACATCTCCAACGTCTTATATTTCAA 57.213 30.769 0.00 0.00 0.00 2.69
2636 5994 8.786826 ACATCTCCAACGTCTTATATTTCAAA 57.213 30.769 0.00 0.00 0.00 2.69
2637 5995 9.226606 ACATCTCCAACGTCTTATATTTCAAAA 57.773 29.630 0.00 0.00 0.00 2.44
2693 6051 9.973450 ATGTAGTGTTAAATAAATGTTTGCACA 57.027 25.926 0.00 0.00 37.31 4.57
2694 6052 9.803315 TGTAGTGTTAAATAAATGTTTGCACAA 57.197 25.926 0.00 0.00 36.16 3.33
2696 6054 8.940768 AGTGTTAAATAAATGTTTGCACAACT 57.059 26.923 11.34 0.00 36.16 3.16
2697 6055 9.377312 AGTGTTAAATAAATGTTTGCACAACTT 57.623 25.926 11.34 4.59 36.16 2.66
2698 6056 9.980780 GTGTTAAATAAATGTTTGCACAACTTT 57.019 25.926 11.34 9.03 36.16 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.120338 CGTAACCACCATACTGCACTTTG 60.120 47.826 0.00 0.00 0.00 2.77
4 5 0.725117 GCGTAACCACCATACTGCAC 59.275 55.000 0.00 0.00 0.00 4.57
5 6 0.738063 CGCGTAACCACCATACTGCA 60.738 55.000 0.00 0.00 0.00 4.41
6 7 1.426041 CCGCGTAACCACCATACTGC 61.426 60.000 4.92 0.00 0.00 4.40
7 8 1.426041 GCCGCGTAACCACCATACTG 61.426 60.000 4.92 0.00 0.00 2.74
8 9 1.153509 GCCGCGTAACCACCATACT 60.154 57.895 4.92 0.00 0.00 2.12
9 10 1.020333 TTGCCGCGTAACCACCATAC 61.020 55.000 4.92 0.00 0.00 2.39
10 11 0.321387 TTTGCCGCGTAACCACCATA 60.321 50.000 4.92 0.00 0.00 2.74
11 12 1.601197 TTTGCCGCGTAACCACCAT 60.601 52.632 4.92 0.00 0.00 3.55
12 13 2.203167 TTTGCCGCGTAACCACCA 60.203 55.556 4.92 0.00 0.00 4.17
13 14 2.253154 GTTTGCCGCGTAACCACC 59.747 61.111 4.92 0.00 0.00 4.61
14 15 1.082366 CTGTTTGCCGCGTAACCAC 60.082 57.895 4.92 0.00 0.00 4.16
15 16 2.255172 CCTGTTTGCCGCGTAACCA 61.255 57.895 4.92 0.00 0.00 3.67
16 17 0.950071 TACCTGTTTGCCGCGTAACC 60.950 55.000 4.92 0.00 0.00 2.85
17 18 1.081094 ATACCTGTTTGCCGCGTAAC 58.919 50.000 4.92 7.20 0.00 2.50
18 19 1.080298 CATACCTGTTTGCCGCGTAA 58.920 50.000 4.92 0.00 0.00 3.18
19 20 1.363145 GCATACCTGTTTGCCGCGTA 61.363 55.000 4.92 0.00 32.54 4.42
20 21 2.686816 GCATACCTGTTTGCCGCGT 61.687 57.895 4.92 0.00 32.54 6.01
21 22 2.100216 GCATACCTGTTTGCCGCG 59.900 61.111 0.00 0.00 32.54 6.46
22 23 1.363145 TACGCATACCTGTTTGCCGC 61.363 55.000 7.06 0.00 34.70 6.53
23 24 1.080298 TTACGCATACCTGTTTGCCG 58.920 50.000 7.06 5.46 34.70 5.69
24 25 1.807742 TGTTACGCATACCTGTTTGCC 59.192 47.619 7.06 0.00 34.70 4.52
25 26 2.727916 GCTGTTACGCATACCTGTTTGC 60.728 50.000 3.05 3.05 34.82 3.68
26 27 2.482336 TGCTGTTACGCATACCTGTTTG 59.518 45.455 0.00 0.00 34.44 2.93
27 28 2.773487 TGCTGTTACGCATACCTGTTT 58.227 42.857 0.00 0.00 34.44 2.83
28 29 2.465860 TGCTGTTACGCATACCTGTT 57.534 45.000 0.00 0.00 34.44 3.16
36 37 5.231702 TCTTACAACTTATGCTGTTACGCA 58.768 37.500 4.63 4.63 45.10 5.24
37 38 5.575606 TCTCTTACAACTTATGCTGTTACGC 59.424 40.000 0.00 0.00 0.00 4.42
38 39 7.411588 GGTTCTCTTACAACTTATGCTGTTACG 60.412 40.741 0.00 0.00 0.00 3.18
39 40 7.386848 TGGTTCTCTTACAACTTATGCTGTTAC 59.613 37.037 0.00 0.00 0.00 2.50
40 41 7.446769 TGGTTCTCTTACAACTTATGCTGTTA 58.553 34.615 0.00 0.00 0.00 2.41
41 42 6.296026 TGGTTCTCTTACAACTTATGCTGTT 58.704 36.000 0.00 0.00 0.00 3.16
42 43 5.865085 TGGTTCTCTTACAACTTATGCTGT 58.135 37.500 0.00 0.00 0.00 4.40
43 44 6.992063 ATGGTTCTCTTACAACTTATGCTG 57.008 37.500 0.00 0.00 0.00 4.41
44 45 8.486210 TGATATGGTTCTCTTACAACTTATGCT 58.514 33.333 0.00 0.00 0.00 3.79
45 46 8.662781 TGATATGGTTCTCTTACAACTTATGC 57.337 34.615 0.00 0.00 0.00 3.14
79 80 7.035612 GTCATCTTTCAGGAAAACAAACAGTT 58.964 34.615 0.00 0.00 43.89 3.16
80 81 6.405842 GGTCATCTTTCAGGAAAACAAACAGT 60.406 38.462 0.00 0.00 0.00 3.55
81 82 5.979517 GGTCATCTTTCAGGAAAACAAACAG 59.020 40.000 0.00 0.00 0.00 3.16
82 83 5.420421 TGGTCATCTTTCAGGAAAACAAACA 59.580 36.000 0.00 0.00 0.00 2.83
83 84 5.901552 TGGTCATCTTTCAGGAAAACAAAC 58.098 37.500 0.00 0.00 0.00 2.93
84 85 6.154363 ACTTGGTCATCTTTCAGGAAAACAAA 59.846 34.615 0.00 0.00 0.00 2.83
85 86 5.656416 ACTTGGTCATCTTTCAGGAAAACAA 59.344 36.000 0.00 0.00 0.00 2.83
86 87 5.067674 CACTTGGTCATCTTTCAGGAAAACA 59.932 40.000 0.00 0.00 0.00 2.83
87 88 5.523369 CACTTGGTCATCTTTCAGGAAAAC 58.477 41.667 0.00 0.00 0.00 2.43
88 89 4.037923 GCACTTGGTCATCTTTCAGGAAAA 59.962 41.667 0.00 0.00 0.00 2.29
89 90 3.569701 GCACTTGGTCATCTTTCAGGAAA 59.430 43.478 0.00 0.00 0.00 3.13
90 91 3.149196 GCACTTGGTCATCTTTCAGGAA 58.851 45.455 0.00 0.00 0.00 3.36
91 92 2.106338 TGCACTTGGTCATCTTTCAGGA 59.894 45.455 0.00 0.00 0.00 3.86
92 93 2.227388 GTGCACTTGGTCATCTTTCAGG 59.773 50.000 10.32 0.00 0.00 3.86
93 94 2.880268 TGTGCACTTGGTCATCTTTCAG 59.120 45.455 19.41 0.00 0.00 3.02
94 95 2.929641 TGTGCACTTGGTCATCTTTCA 58.070 42.857 19.41 0.00 0.00 2.69
95 96 3.565482 TCTTGTGCACTTGGTCATCTTTC 59.435 43.478 19.41 0.00 0.00 2.62
96 97 3.554934 TCTTGTGCACTTGGTCATCTTT 58.445 40.909 19.41 0.00 0.00 2.52
97 98 3.144506 CTCTTGTGCACTTGGTCATCTT 58.855 45.455 19.41 0.00 0.00 2.40
98 99 2.369860 TCTCTTGTGCACTTGGTCATCT 59.630 45.455 19.41 0.00 0.00 2.90
99 100 2.771089 TCTCTTGTGCACTTGGTCATC 58.229 47.619 19.41 0.00 0.00 2.92
100 101 2.936919 TCTCTTGTGCACTTGGTCAT 57.063 45.000 19.41 0.00 0.00 3.06
101 102 2.104622 TGATCTCTTGTGCACTTGGTCA 59.895 45.455 19.41 13.42 0.00 4.02
102 103 2.771089 TGATCTCTTGTGCACTTGGTC 58.229 47.619 19.41 11.10 0.00 4.02
103 104 2.936919 TGATCTCTTGTGCACTTGGT 57.063 45.000 19.41 1.33 0.00 3.67
104 105 2.159421 GCATGATCTCTTGTGCACTTGG 60.159 50.000 19.41 8.08 37.52 3.61
105 106 2.486592 TGCATGATCTCTTGTGCACTTG 59.513 45.455 19.41 10.70 42.13 3.16
106 107 2.786777 TGCATGATCTCTTGTGCACTT 58.213 42.857 19.41 0.00 42.13 3.16
107 108 2.484742 TGCATGATCTCTTGTGCACT 57.515 45.000 19.41 0.00 42.13 4.40
110 111 6.327934 AGTTAAAATGCATGATCTCTTGTGC 58.672 36.000 0.00 0.00 38.05 4.57
111 112 7.811236 ACAAGTTAAAATGCATGATCTCTTGTG 59.189 33.333 24.92 11.31 39.69 3.33
112 113 7.889469 ACAAGTTAAAATGCATGATCTCTTGT 58.111 30.769 22.35 22.35 37.51 3.16
113 114 8.242053 AGACAAGTTAAAATGCATGATCTCTTG 58.758 33.333 21.50 21.50 35.96 3.02
114 115 8.345724 AGACAAGTTAAAATGCATGATCTCTT 57.654 30.769 0.00 0.41 0.00 2.85
115 116 7.934855 AGACAAGTTAAAATGCATGATCTCT 57.065 32.000 0.00 0.00 0.00 3.10
147 148 8.246871 GCATCTTTGCTTCTAAAAGGAATTAGT 58.753 33.333 0.00 0.00 45.77 2.24
148 149 8.626093 GCATCTTTGCTTCTAAAAGGAATTAG 57.374 34.615 0.00 0.00 45.77 1.73
254 258 4.432712 AGTTGCTTACCTTTTGCAAGTTG 58.567 39.130 0.00 0.00 44.76 3.16
271 275 8.195436 TGACCATGTAGAGTACTATTTAGTTGC 58.805 37.037 0.00 0.00 37.73 4.17
280 284 7.770366 TCAAAAGTGACCATGTAGAGTACTA 57.230 36.000 0.00 0.00 0.00 1.82
281 285 6.665992 TCAAAAGTGACCATGTAGAGTACT 57.334 37.500 0.00 0.00 0.00 2.73
282 286 6.704493 TGTTCAAAAGTGACCATGTAGAGTAC 59.296 38.462 0.00 0.00 31.90 2.73
283 287 6.822442 TGTTCAAAAGTGACCATGTAGAGTA 58.178 36.000 0.00 0.00 31.90 2.59
284 288 5.680619 TGTTCAAAAGTGACCATGTAGAGT 58.319 37.500 0.00 0.00 31.90 3.24
285 289 6.260936 AGTTGTTCAAAAGTGACCATGTAGAG 59.739 38.462 0.00 0.00 31.90 2.43
286 290 6.119536 AGTTGTTCAAAAGTGACCATGTAGA 58.880 36.000 0.00 0.00 31.90 2.59
287 291 6.377327 AGTTGTTCAAAAGTGACCATGTAG 57.623 37.500 0.00 0.00 31.90 2.74
351 359 9.318041 CGAAGAACTCATATTTGTTACTGTTTG 57.682 33.333 0.00 0.00 0.00 2.93
352 360 9.052759 ACGAAGAACTCATATTTGTTACTGTTT 57.947 29.630 0.00 0.00 0.00 2.83
357 365 7.544566 TCCTGACGAAGAACTCATATTTGTTAC 59.455 37.037 0.00 0.00 0.00 2.50
358 366 7.608153 TCCTGACGAAGAACTCATATTTGTTA 58.392 34.615 0.00 0.00 0.00 2.41
359 367 6.464222 TCCTGACGAAGAACTCATATTTGTT 58.536 36.000 0.00 0.00 0.00 2.83
362 370 6.878317 TGATCCTGACGAAGAACTCATATTT 58.122 36.000 0.00 0.00 0.00 1.40
363 371 6.471233 TGATCCTGACGAAGAACTCATATT 57.529 37.500 0.00 0.00 0.00 1.28
364 372 6.471233 TTGATCCTGACGAAGAACTCATAT 57.529 37.500 0.00 0.00 0.00 1.78
365 373 5.914898 TTGATCCTGACGAAGAACTCATA 57.085 39.130 0.00 0.00 0.00 2.15
366 374 4.808414 TTGATCCTGACGAAGAACTCAT 57.192 40.909 0.00 0.00 0.00 2.90
367 375 4.808414 ATTGATCCTGACGAAGAACTCA 57.192 40.909 0.00 0.00 0.00 3.41
368 376 4.742659 GCTATTGATCCTGACGAAGAACTC 59.257 45.833 0.00 0.00 0.00 3.01
369 377 4.160439 TGCTATTGATCCTGACGAAGAACT 59.840 41.667 0.00 0.00 0.00 3.01
370 378 4.268884 GTGCTATTGATCCTGACGAAGAAC 59.731 45.833 0.00 0.00 0.00 3.01
371 379 4.081697 TGTGCTATTGATCCTGACGAAGAA 60.082 41.667 0.00 0.00 0.00 2.52
372 380 3.447229 TGTGCTATTGATCCTGACGAAGA 59.553 43.478 0.00 0.00 0.00 2.87
373 381 3.785486 TGTGCTATTGATCCTGACGAAG 58.215 45.455 0.00 0.00 0.00 3.79
376 384 3.443099 TCTGTGCTATTGATCCTGACG 57.557 47.619 0.00 0.00 0.00 4.35
393 401 5.840243 TTGATGTATTTTCCCTGCATCTG 57.160 39.130 0.00 0.00 36.87 2.90
409 417 3.009916 ACCTCTCATGCCTCTTTTGATGT 59.990 43.478 0.00 0.00 0.00 3.06
411 419 4.313020 AACCTCTCATGCCTCTTTTGAT 57.687 40.909 0.00 0.00 0.00 2.57
413 421 3.613432 GCAAACCTCTCATGCCTCTTTTG 60.613 47.826 0.00 0.00 34.03 2.44
422 434 6.211587 TGATTTATTGGCAAACCTCTCATG 57.788 37.500 3.01 0.00 36.63 3.07
428 440 9.830975 GGTTATTATTGATTTATTGGCAAACCT 57.169 29.630 3.01 0.00 36.63 3.50
445 457 6.071616 TGCGCCTTTCTTTCTTGGTTATTATT 60.072 34.615 4.18 0.00 0.00 1.40
450 462 2.292292 GTGCGCCTTTCTTTCTTGGTTA 59.708 45.455 4.18 0.00 0.00 2.85
451 463 1.067060 GTGCGCCTTTCTTTCTTGGTT 59.933 47.619 4.18 0.00 0.00 3.67
453 465 0.385974 CGTGCGCCTTTCTTTCTTGG 60.386 55.000 4.18 0.00 0.00 3.61
454 466 0.385974 CCGTGCGCCTTTCTTTCTTG 60.386 55.000 4.18 0.00 0.00 3.02
455 467 0.818040 ACCGTGCGCCTTTCTTTCTT 60.818 50.000 4.18 0.00 0.00 2.52
457 469 0.660300 CAACCGTGCGCCTTTCTTTC 60.660 55.000 4.18 0.00 0.00 2.62
459 471 0.889186 ATCAACCGTGCGCCTTTCTT 60.889 50.000 4.18 0.00 0.00 2.52
461 473 1.014352 ATATCAACCGTGCGCCTTTC 58.986 50.000 4.18 0.00 0.00 2.62
462 474 1.937899 GTATATCAACCGTGCGCCTTT 59.062 47.619 4.18 0.00 0.00 3.11
465 480 0.872881 ACGTATATCAACCGTGCGCC 60.873 55.000 4.18 0.00 32.86 6.53
467 482 5.090757 ACATATACGTATATCAACCGTGCG 58.909 41.667 22.39 12.04 36.12 5.34
472 487 8.433126 GCTGTTCAACATATACGTATATCAACC 58.567 37.037 22.39 10.78 0.00 3.77
473 488 8.974408 TGCTGTTCAACATATACGTATATCAAC 58.026 33.333 22.39 20.06 0.00 3.18
564 814 4.790140 CGTAACTTGAGCAAATCAATGAGC 59.210 41.667 0.00 0.00 46.71 4.26
565 815 5.327091 CCGTAACTTGAGCAAATCAATGAG 58.673 41.667 0.00 0.00 46.71 2.90
575 825 2.621055 ACAAAATGCCGTAACTTGAGCA 59.379 40.909 0.00 0.00 40.00 4.26
576 826 3.234386 GACAAAATGCCGTAACTTGAGC 58.766 45.455 0.00 0.00 0.00 4.26
579 832 3.305110 GGTGACAAAATGCCGTAACTTG 58.695 45.455 0.00 0.00 0.00 3.16
586 839 0.875728 TTACGGGTGACAAAATGCCG 59.124 50.000 0.00 0.00 0.00 5.69
588 841 1.201414 CCCTTACGGGTGACAAAATGC 59.799 52.381 0.00 0.00 46.12 3.56
646 908 4.023291 TGAGCTGTCCAACTTTTCCTTTT 58.977 39.130 0.00 0.00 0.00 2.27
660 926 4.937620 TGTTGGATGAGTTTATGAGCTGTC 59.062 41.667 0.00 0.00 0.00 3.51
664 930 4.458989 TGGTTGTTGGATGAGTTTATGAGC 59.541 41.667 0.00 0.00 0.00 4.26
690 956 8.519526 TGTTTGCTTGACATACCTTATTTTAGG 58.480 33.333 0.00 0.00 41.31 2.69
691 957 9.341899 GTGTTTGCTTGACATACCTTATTTTAG 57.658 33.333 0.00 0.00 29.89 1.85
703 969 3.494749 CCCCATTTGTGTTTGCTTGACAT 60.495 43.478 0.00 0.00 0.00 3.06
705 971 2.158971 ACCCCATTTGTGTTTGCTTGAC 60.159 45.455 0.00 0.00 0.00 3.18
725 991 0.331616 AGGAGGTAACAATGGCCCAC 59.668 55.000 0.00 0.00 41.41 4.61
731 997 3.074412 AGCGACAAAGGAGGTAACAATG 58.926 45.455 0.00 0.00 41.41 2.82
787 1055 4.615588 CCAAAAGCTTGGTTCCCAATTA 57.384 40.909 0.00 0.00 46.25 1.40
822 1097 0.107703 TGTCTCCTTAATGGCCTGCG 60.108 55.000 3.32 0.00 35.26 5.18
823 1098 1.952296 CATGTCTCCTTAATGGCCTGC 59.048 52.381 3.32 0.00 35.26 4.85
869 1145 0.391130 TACGTGCTGGGCTTAGCTTG 60.391 55.000 3.59 9.23 44.01 4.01
885 1161 2.493030 CACTAGCGGTGGGGTACG 59.507 66.667 2.24 0.00 41.90 3.67
915 1191 9.565090 TGAATCATCAATCCTTCCAGTTTATAG 57.435 33.333 0.00 0.00 30.99 1.31
922 1198 4.036498 GCAGTGAATCATCAATCCTTCCAG 59.964 45.833 0.00 0.00 37.30 3.86
923 1199 3.949754 GCAGTGAATCATCAATCCTTCCA 59.050 43.478 0.00 0.00 37.30 3.53
944 1220 0.670162 TTGCTCCTTTCAGCTTGTGC 59.330 50.000 0.00 0.00 40.39 4.57
954 1230 3.901844 TGGTAGTGTACTCTTGCTCCTTT 59.098 43.478 2.25 0.00 0.00 3.11
960 1236 2.743636 TGCTGGTAGTGTACTCTTGC 57.256 50.000 2.25 4.35 0.00 4.01
1245 1521 0.027979 CAAATATGTGGGCGACGCAG 59.972 55.000 23.09 0.00 43.91 5.18
1254 1530 2.486951 GCTGCAGAGCAAATATGTGG 57.513 50.000 20.43 0.00 45.46 4.17
1389 1701 1.171308 GAACACTGCATGCCATCAGT 58.829 50.000 16.68 9.04 43.67 3.41
1390 1702 1.400846 GAGAACACTGCATGCCATCAG 59.599 52.381 16.68 8.31 36.45 2.90
1391 1703 1.271488 TGAGAACACTGCATGCCATCA 60.271 47.619 16.68 5.90 0.00 3.07
1392 1704 1.456296 TGAGAACACTGCATGCCATC 58.544 50.000 16.68 6.23 0.00 3.51
1393 1705 2.139323 ATGAGAACACTGCATGCCAT 57.861 45.000 16.68 5.59 0.00 4.40
1394 1706 2.635714 CTATGAGAACACTGCATGCCA 58.364 47.619 16.68 3.09 0.00 4.92
1395 1707 1.945394 CCTATGAGAACACTGCATGCC 59.055 52.381 16.68 0.00 0.00 4.40
1396 1708 2.636830 ACCTATGAGAACACTGCATGC 58.363 47.619 11.82 11.82 0.00 4.06
1397 1709 4.005650 ACAACCTATGAGAACACTGCATG 58.994 43.478 0.00 0.00 0.00 4.06
1398 1710 4.292186 ACAACCTATGAGAACACTGCAT 57.708 40.909 0.00 0.00 0.00 3.96
1399 1711 3.769739 ACAACCTATGAGAACACTGCA 57.230 42.857 0.00 0.00 0.00 4.41
1400 1712 6.595716 AGATTTACAACCTATGAGAACACTGC 59.404 38.462 0.00 0.00 0.00 4.40
1401 1713 7.413438 GCAGATTTACAACCTATGAGAACACTG 60.413 40.741 0.00 0.00 0.00 3.66
1402 1714 6.595716 GCAGATTTACAACCTATGAGAACACT 59.404 38.462 0.00 0.00 0.00 3.55
1403 1715 6.371548 TGCAGATTTACAACCTATGAGAACAC 59.628 38.462 0.00 0.00 0.00 3.32
1411 1723 3.065371 GCGCTTGCAGATTTACAACCTAT 59.935 43.478 0.00 0.00 38.92 2.57
1432 1744 0.514691 CTTTGAGCGACTCCAACTGC 59.485 55.000 4.73 0.00 0.00 4.40
1564 1876 6.013379 TCTCAATCTTTACTGAATGTCCTGGT 60.013 38.462 0.00 0.00 0.00 4.00
1637 1961 8.593679 TGAACTGTTGTAATCCTGAGAAGAATA 58.406 33.333 0.00 0.00 0.00 1.75
1638 1962 7.389053 GTGAACTGTTGTAATCCTGAGAAGAAT 59.611 37.037 0.00 0.00 0.00 2.40
1639 1963 6.706270 GTGAACTGTTGTAATCCTGAGAAGAA 59.294 38.462 0.00 0.00 0.00 2.52
1680 2004 3.064207 TCATTAAATGACGCCGGATAGC 58.936 45.455 5.05 0.00 33.59 2.97
1733 2063 8.631480 TCTTGCAGATATTCTTGCATATCAAT 57.369 30.769 10.15 0.00 38.25 2.57
1785 2116 2.928416 GCAAAGGCAACCGACTAGT 58.072 52.632 0.00 0.00 40.72 2.57
1808 2141 3.402110 CATGCTGTGACACCTAGTTGAA 58.598 45.455 2.45 0.00 0.00 2.69
1826 2261 2.871133 CAGTTACCAAGCACATGCATG 58.129 47.619 25.09 25.09 45.16 4.06
1827 2262 1.203052 GCAGTTACCAAGCACATGCAT 59.797 47.619 6.64 0.00 45.16 3.96
1828 2263 0.597568 GCAGTTACCAAGCACATGCA 59.402 50.000 6.64 0.00 45.16 3.96
1829 2264 0.597568 TGCAGTTACCAAGCACATGC 59.402 50.000 0.00 0.00 42.49 4.06
1957 2410 8.621286 ACTTCAGTTAGTAAAAACCATGTCTTG 58.379 33.333 0.00 0.00 0.00 3.02
2009 5203 3.319137 TGCCAAGTCACTACAGCTAAG 57.681 47.619 0.00 0.00 0.00 2.18
2036 5289 0.508213 GCTTGCACGAAACCAAATGC 59.492 50.000 0.00 0.00 38.59 3.56
2047 5300 0.304705 ACTTGTTTCTCGCTTGCACG 59.695 50.000 0.00 0.00 0.00 5.34
2054 5307 0.384353 GCACGGAACTTGTTTCTCGC 60.384 55.000 0.00 0.00 33.59 5.03
2062 5315 2.178912 TTCCCTAAGCACGGAACTTG 57.821 50.000 0.00 0.00 33.14 3.16
2112 5365 1.681264 GTTTGGACTTTGGACACCCAG 59.319 52.381 0.00 0.00 44.60 4.45
2113 5366 1.770294 GTTTGGACTTTGGACACCCA 58.230 50.000 0.00 0.00 41.64 4.51
2114 5367 0.666374 CGTTTGGACTTTGGACACCC 59.334 55.000 0.00 0.00 0.00 4.61
2117 5370 3.558321 CCCTATCGTTTGGACTTTGGACA 60.558 47.826 0.00 0.00 0.00 4.02
2118 5371 3.007635 CCCTATCGTTTGGACTTTGGAC 58.992 50.000 0.00 0.00 0.00 4.02
2119 5372 2.907696 TCCCTATCGTTTGGACTTTGGA 59.092 45.455 0.00 0.00 0.00 3.53
2120 5373 3.343941 TCCCTATCGTTTGGACTTTGG 57.656 47.619 0.00 0.00 0.00 3.28
2133 5386 6.316390 TGCTTCTTTCTTTTTCGATCCCTATC 59.684 38.462 0.00 0.00 0.00 2.08
2135 5388 5.556915 TGCTTCTTTCTTTTTCGATCCCTA 58.443 37.500 0.00 0.00 0.00 3.53
2136 5389 4.398319 TGCTTCTTTCTTTTTCGATCCCT 58.602 39.130 0.00 0.00 0.00 4.20
2139 5392 6.857964 TGATGTTGCTTCTTTCTTTTTCGATC 59.142 34.615 0.00 0.00 0.00 3.69
2142 5395 6.473455 AGTTGATGTTGCTTCTTTCTTTTTCG 59.527 34.615 0.00 0.00 0.00 3.46
2143 5396 7.254218 CCAGTTGATGTTGCTTCTTTCTTTTTC 60.254 37.037 0.00 0.00 0.00 2.29
2146 5399 5.594926 CCAGTTGATGTTGCTTCTTTCTTT 58.405 37.500 0.00 0.00 0.00 2.52
2147 5400 4.500375 GCCAGTTGATGTTGCTTCTTTCTT 60.500 41.667 0.00 0.00 0.00 2.52
2149 5402 3.005155 AGCCAGTTGATGTTGCTTCTTTC 59.995 43.478 0.00 0.00 0.00 2.62
2151 5404 2.295349 CAGCCAGTTGATGTTGCTTCTT 59.705 45.455 0.00 0.00 0.00 2.52
2153 5406 1.068055 CCAGCCAGTTGATGTTGCTTC 60.068 52.381 0.00 0.00 0.00 3.86
2154 5407 0.963962 CCAGCCAGTTGATGTTGCTT 59.036 50.000 0.00 0.00 0.00 3.91
2155 5408 0.111061 TCCAGCCAGTTGATGTTGCT 59.889 50.000 0.00 0.00 0.00 3.91
2156 5409 0.961019 TTCCAGCCAGTTGATGTTGC 59.039 50.000 0.00 0.00 0.00 4.17
2158 5411 2.034558 CGTTTTCCAGCCAGTTGATGTT 59.965 45.455 0.00 0.00 0.00 2.71
2159 5412 1.608590 CGTTTTCCAGCCAGTTGATGT 59.391 47.619 0.00 0.00 0.00 3.06
2161 5414 1.981256 ACGTTTTCCAGCCAGTTGAT 58.019 45.000 0.00 0.00 0.00 2.57
2164 5417 1.202557 TCGTACGTTTTCCAGCCAGTT 60.203 47.619 16.05 0.00 0.00 3.16
2165 5418 0.390124 TCGTACGTTTTCCAGCCAGT 59.610 50.000 16.05 0.00 0.00 4.00
2166 5419 0.788391 GTCGTACGTTTTCCAGCCAG 59.212 55.000 16.05 0.00 0.00 4.85
2168 5421 0.509929 GTGTCGTACGTTTTCCAGCC 59.490 55.000 16.05 0.00 0.00 4.85
2169 5422 1.191647 CAGTGTCGTACGTTTTCCAGC 59.808 52.381 16.05 0.00 0.00 4.85
2170 5423 2.470257 GTCAGTGTCGTACGTTTTCCAG 59.530 50.000 16.05 1.22 0.00 3.86
2171 5424 2.099592 AGTCAGTGTCGTACGTTTTCCA 59.900 45.455 16.05 2.97 0.00 3.53
2172 5425 2.470257 CAGTCAGTGTCGTACGTTTTCC 59.530 50.000 16.05 0.39 0.00 3.13
2173 5426 2.097541 GCAGTCAGTGTCGTACGTTTTC 60.098 50.000 16.05 5.49 0.00 2.29
2174 5427 1.856597 GCAGTCAGTGTCGTACGTTTT 59.143 47.619 16.05 0.00 0.00 2.43
2178 5431 1.053048 CTTGCAGTCAGTGTCGTACG 58.947 55.000 9.53 9.53 0.00 3.67
2180 5433 1.000607 GTCCTTGCAGTCAGTGTCGTA 60.001 52.381 0.00 0.00 0.00 3.43
2181 5434 0.249489 GTCCTTGCAGTCAGTGTCGT 60.249 55.000 0.00 0.00 0.00 4.34
2183 5436 1.802960 CATGTCCTTGCAGTCAGTGTC 59.197 52.381 0.00 0.00 0.00 3.67
2185 5438 2.174363 TCATGTCCTTGCAGTCAGTG 57.826 50.000 0.00 0.00 0.00 3.66
2186 5439 2.880890 GTTTCATGTCCTTGCAGTCAGT 59.119 45.455 0.00 0.00 0.00 3.41
2187 5440 2.880268 TGTTTCATGTCCTTGCAGTCAG 59.120 45.455 0.00 0.00 0.00 3.51
2189 5442 2.351157 GCTGTTTCATGTCCTTGCAGTC 60.351 50.000 0.00 0.00 0.00 3.51
2190 5443 1.610522 GCTGTTTCATGTCCTTGCAGT 59.389 47.619 0.00 0.00 0.00 4.40
2191 5444 1.610038 TGCTGTTTCATGTCCTTGCAG 59.390 47.619 0.00 0.00 0.00 4.41
2192 5445 1.689984 TGCTGTTTCATGTCCTTGCA 58.310 45.000 0.00 0.00 0.00 4.08
2193 5446 2.798976 TTGCTGTTTCATGTCCTTGC 57.201 45.000 0.00 0.00 0.00 4.01
2194 5447 3.054878 GCTTTGCTGTTTCATGTCCTTG 58.945 45.455 0.00 0.00 0.00 3.61
2197 5450 2.798976 TGCTTTGCTGTTTCATGTCC 57.201 45.000 0.00 0.00 0.00 4.02
2198 5451 4.329528 TGTTTTGCTTTGCTGTTTCATGTC 59.670 37.500 0.00 0.00 0.00 3.06
2199 5452 4.252073 TGTTTTGCTTTGCTGTTTCATGT 58.748 34.783 0.00 0.00 0.00 3.21
2200 5453 4.861389 TGTTTTGCTTTGCTGTTTCATG 57.139 36.364 0.00 0.00 0.00 3.07
2202 5455 5.871524 TGTTATGTTTTGCTTTGCTGTTTCA 59.128 32.000 0.00 0.00 0.00 2.69
2203 5456 6.035975 ACTGTTATGTTTTGCTTTGCTGTTTC 59.964 34.615 0.00 0.00 0.00 2.78
2204 5457 5.874261 ACTGTTATGTTTTGCTTTGCTGTTT 59.126 32.000 0.00 0.00 0.00 2.83
2205 5458 5.291614 CACTGTTATGTTTTGCTTTGCTGTT 59.708 36.000 0.00 0.00 0.00 3.16
2206 5459 4.805192 CACTGTTATGTTTTGCTTTGCTGT 59.195 37.500 0.00 0.00 0.00 4.40
2207 5460 5.042593 TCACTGTTATGTTTTGCTTTGCTG 58.957 37.500 0.00 0.00 0.00 4.41
2209 5462 5.463061 ACATCACTGTTATGTTTTGCTTTGC 59.537 36.000 1.87 0.00 33.83 3.68
2211 5464 6.804677 TCACATCACTGTTATGTTTTGCTTT 58.195 32.000 4.92 0.00 35.39 3.51
2212 5465 6.389830 TCACATCACTGTTATGTTTTGCTT 57.610 33.333 4.92 0.00 35.39 3.91
2213 5466 6.384224 CATCACATCACTGTTATGTTTTGCT 58.616 36.000 4.92 0.00 35.39 3.91
2214 5467 5.574055 CCATCACATCACTGTTATGTTTTGC 59.426 40.000 4.92 0.00 35.92 3.68
2217 5470 5.183713 CCACCATCACATCACTGTTATGTTT 59.816 40.000 4.92 0.00 35.92 2.83
2218 5471 4.701651 CCACCATCACATCACTGTTATGTT 59.298 41.667 4.92 0.00 35.92 2.71
2219 5472 4.019411 TCCACCATCACATCACTGTTATGT 60.019 41.667 1.87 1.87 35.92 2.29
2220 5473 4.516323 TCCACCATCACATCACTGTTATG 58.484 43.478 0.57 0.57 36.94 1.90
2221 5474 4.774124 CTCCACCATCACATCACTGTTAT 58.226 43.478 0.00 0.00 31.62 1.89
2223 5476 2.877300 GCTCCACCATCACATCACTGTT 60.877 50.000 0.00 0.00 31.62 3.16
2224 5477 1.339438 GCTCCACCATCACATCACTGT 60.339 52.381 0.00 0.00 35.44 3.55
2225 5478 1.065636 AGCTCCACCATCACATCACTG 60.066 52.381 0.00 0.00 0.00 3.66
2226 5479 1.283347 AGCTCCACCATCACATCACT 58.717 50.000 0.00 0.00 0.00 3.41
2229 5482 4.077300 TCATAAGCTCCACCATCACATC 57.923 45.455 0.00 0.00 0.00 3.06
2230 5483 4.395625 CATCATAAGCTCCACCATCACAT 58.604 43.478 0.00 0.00 0.00 3.21
2231 5484 3.434024 CCATCATAAGCTCCACCATCACA 60.434 47.826 0.00 0.00 0.00 3.58
2232 5485 3.144506 CCATCATAAGCTCCACCATCAC 58.855 50.000 0.00 0.00 0.00 3.06
2233 5486 2.779430 ACCATCATAAGCTCCACCATCA 59.221 45.455 0.00 0.00 0.00 3.07
2234 5487 3.498774 ACCATCATAAGCTCCACCATC 57.501 47.619 0.00 0.00 0.00 3.51
2235 5488 3.959495 AACCATCATAAGCTCCACCAT 57.041 42.857 0.00 0.00 0.00 3.55
2236 5489 4.411869 TCATAACCATCATAAGCTCCACCA 59.588 41.667 0.00 0.00 0.00 4.17
2237 5490 4.973168 TCATAACCATCATAAGCTCCACC 58.027 43.478 0.00 0.00 0.00 4.61
2239 5492 4.505566 GCCTCATAACCATCATAAGCTCCA 60.506 45.833 0.00 0.00 0.00 3.86
2241 5494 4.645535 TGCCTCATAACCATCATAAGCTC 58.354 43.478 0.00 0.00 0.00 4.09
2243 5496 5.972107 AATGCCTCATAACCATCATAAGC 57.028 39.130 0.00 0.00 0.00 3.09
2244 5497 8.797350 TCATAATGCCTCATAACCATCATAAG 57.203 34.615 0.00 0.00 0.00 1.73
2246 5499 7.341030 CCTCATAATGCCTCATAACCATCATA 58.659 38.462 0.00 0.00 0.00 2.15
2247 5500 6.185511 CCTCATAATGCCTCATAACCATCAT 58.814 40.000 0.00 0.00 0.00 2.45
2248 5501 5.563592 CCTCATAATGCCTCATAACCATCA 58.436 41.667 0.00 0.00 0.00 3.07
2256 5573 3.428532 GGAATGCCTCATAATGCCTCAT 58.571 45.455 0.00 0.00 0.00 2.90
2258 5575 1.808945 CGGAATGCCTCATAATGCCTC 59.191 52.381 0.00 0.00 0.00 4.70
2259 5576 1.143684 ACGGAATGCCTCATAATGCCT 59.856 47.619 0.00 0.00 0.00 4.75
2260 5577 1.537202 GACGGAATGCCTCATAATGCC 59.463 52.381 0.00 0.00 0.00 4.40
2262 5579 2.849942 TGGACGGAATGCCTCATAATG 58.150 47.619 0.00 0.00 0.00 1.90
2267 5584 0.321564 CTGTTGGACGGAATGCCTCA 60.322 55.000 0.00 0.00 0.00 3.86
2287 5639 6.699242 AGTATCATCCATCATGAACTCCAT 57.301 37.500 0.00 0.00 45.06 3.41
2289 5641 5.704515 CCAAGTATCATCCATCATGAACTCC 59.295 44.000 0.00 0.00 45.06 3.85
2299 5651 3.649981 CCTCACTCCCAAGTATCATCCAT 59.350 47.826 0.00 0.00 33.25 3.41
2303 5655 4.227197 CCTACCTCACTCCCAAGTATCAT 58.773 47.826 0.00 0.00 33.25 2.45
2314 5666 2.581074 AGGTTCGCCTACCTCACTC 58.419 57.895 0.00 0.00 45.44 3.51
2315 5667 4.867847 AGGTTCGCCTACCTCACT 57.132 55.556 0.00 0.00 45.44 3.41
2324 5676 0.391263 CAGGTTAGGTCAGGTTCGCC 60.391 60.000 0.00 0.00 37.60 5.54
2326 5678 0.320374 TGCAGGTTAGGTCAGGTTCG 59.680 55.000 0.00 0.00 0.00 3.95
2327 5679 1.809684 GTGCAGGTTAGGTCAGGTTC 58.190 55.000 0.00 0.00 0.00 3.62
2393 5751 1.456518 TCGGAGCCTGAGATGGAGG 60.457 63.158 0.00 0.00 0.00 4.30
2425 5783 2.890474 CGTTGAATCCCGCCTCCG 60.890 66.667 0.00 0.00 0.00 4.63
2426 5784 2.106683 CACGTTGAATCCCGCCTCC 61.107 63.158 0.00 0.00 0.00 4.30
2427 5785 2.106683 CCACGTTGAATCCCGCCTC 61.107 63.158 0.00 0.00 0.00 4.70
2428 5786 2.046314 CCACGTTGAATCCCGCCT 60.046 61.111 0.00 0.00 0.00 5.52
2429 5787 3.810896 GCCACGTTGAATCCCGCC 61.811 66.667 0.00 0.00 0.00 6.13
2430 5788 2.746277 AGCCACGTTGAATCCCGC 60.746 61.111 0.00 0.00 0.00 6.13
2431 5789 2.398554 CCAGCCACGTTGAATCCCG 61.399 63.158 0.00 0.00 0.00 5.14
2432 5790 2.700773 GCCAGCCACGTTGAATCCC 61.701 63.158 0.00 0.00 0.00 3.85
2433 5791 1.675641 AGCCAGCCACGTTGAATCC 60.676 57.895 0.00 0.00 0.00 3.01
2434 5792 1.503542 CAGCCAGCCACGTTGAATC 59.496 57.895 0.00 0.00 0.00 2.52
2435 5793 1.973281 CCAGCCAGCCACGTTGAAT 60.973 57.895 0.00 0.00 0.00 2.57
2436 5794 2.594303 CCAGCCAGCCACGTTGAA 60.594 61.111 0.00 0.00 0.00 2.69
2459 5817 3.811118 TACCACGGGTGTTGTGCCG 62.811 63.158 5.90 0.00 36.19 5.69
2460 5818 1.964373 CTACCACGGGTGTTGTGCC 60.964 63.158 5.90 0.00 36.19 5.01
2461 5819 0.033781 TACTACCACGGGTGTTGTGC 59.966 55.000 5.90 0.00 36.19 4.57
2462 5820 1.342174 ACTACTACCACGGGTGTTGTG 59.658 52.381 5.90 0.00 36.19 3.33
2463 5821 1.708341 ACTACTACCACGGGTGTTGT 58.292 50.000 5.90 2.83 36.19 3.32
2464 5822 3.429822 CCATACTACTACCACGGGTGTTG 60.430 52.174 5.90 5.96 36.19 3.33
2465 5823 2.762327 CCATACTACTACCACGGGTGTT 59.238 50.000 5.90 0.00 36.19 3.32
2466 5824 2.381911 CCATACTACTACCACGGGTGT 58.618 52.381 5.90 5.10 36.19 4.16
2467 5825 1.684983 CCCATACTACTACCACGGGTG 59.315 57.143 5.90 0.00 36.19 4.61
2468 5826 2.031097 GCCCATACTACTACCACGGGT 61.031 57.143 0.00 1.14 40.16 5.28
2469 5827 0.677842 GCCCATACTACTACCACGGG 59.322 60.000 0.00 0.00 35.18 5.28
2470 5828 0.677842 GGCCCATACTACTACCACGG 59.322 60.000 0.00 0.00 0.00 4.94
2471 5829 1.700955 AGGCCCATACTACTACCACG 58.299 55.000 0.00 0.00 0.00 4.94
2472 5830 4.675038 AGATAGGCCCATACTACTACCAC 58.325 47.826 0.00 0.00 0.00 4.16
2473 5831 5.572271 CGTAGATAGGCCCATACTACTACCA 60.572 48.000 18.14 0.00 33.57 3.25
2474 5832 4.880696 CGTAGATAGGCCCATACTACTACC 59.119 50.000 18.14 0.00 33.57 3.18
2475 5833 4.880696 CCGTAGATAGGCCCATACTACTAC 59.119 50.000 18.14 10.01 33.57 2.73
2476 5834 4.080129 CCCGTAGATAGGCCCATACTACTA 60.080 50.000 18.14 0.91 33.57 1.82
2477 5835 3.308976 CCCGTAGATAGGCCCATACTACT 60.309 52.174 18.14 1.71 33.57 2.57
2478 5836 3.022406 CCCGTAGATAGGCCCATACTAC 58.978 54.545 0.00 7.95 0.00 2.73
2479 5837 2.024655 CCCCGTAGATAGGCCCATACTA 60.025 54.545 0.00 0.00 0.00 1.82
2480 5838 1.273098 CCCCGTAGATAGGCCCATACT 60.273 57.143 0.00 0.00 0.00 2.12
2481 5839 1.192428 CCCCGTAGATAGGCCCATAC 58.808 60.000 0.00 0.00 0.00 2.39
2482 5840 1.006758 CTCCCCGTAGATAGGCCCATA 59.993 57.143 0.00 0.00 0.00 2.74
2483 5841 0.252284 CTCCCCGTAGATAGGCCCAT 60.252 60.000 0.00 0.00 0.00 4.00
2484 5842 1.155390 CTCCCCGTAGATAGGCCCA 59.845 63.158 0.00 0.00 0.00 5.36
2485 5843 2.284276 GCTCCCCGTAGATAGGCCC 61.284 68.421 0.00 0.00 0.00 5.80
2486 5844 2.637383 CGCTCCCCGTAGATAGGCC 61.637 68.421 0.00 0.00 0.00 5.19
2487 5845 2.637383 CCGCTCCCCGTAGATAGGC 61.637 68.421 0.00 0.00 34.38 3.93
2488 5846 2.637383 GCCGCTCCCCGTAGATAGG 61.637 68.421 0.00 0.00 34.38 2.57
2489 5847 0.322277 TAGCCGCTCCCCGTAGATAG 60.322 60.000 0.00 0.00 34.38 2.08
2490 5848 0.330604 ATAGCCGCTCCCCGTAGATA 59.669 55.000 0.00 0.00 34.38 1.98
2491 5849 1.076906 ATAGCCGCTCCCCGTAGAT 59.923 57.895 0.00 0.00 34.38 1.98
2492 5850 1.901948 CATAGCCGCTCCCCGTAGA 60.902 63.158 0.00 0.00 34.38 2.59
2493 5851 2.143594 GACATAGCCGCTCCCCGTAG 62.144 65.000 0.00 0.00 34.38 3.51
2494 5852 2.123597 ACATAGCCGCTCCCCGTA 60.124 61.111 0.00 0.00 34.38 4.02
2495 5853 3.537874 GACATAGCCGCTCCCCGT 61.538 66.667 0.00 0.00 34.38 5.28
2496 5854 3.227276 AGACATAGCCGCTCCCCG 61.227 66.667 0.00 0.00 0.00 5.73
2497 5855 2.370647 GACAGACATAGCCGCTCCCC 62.371 65.000 0.00 0.00 0.00 4.81
2498 5856 1.068250 GACAGACATAGCCGCTCCC 59.932 63.158 0.00 0.00 0.00 4.30
2499 5857 0.031449 GAGACAGACATAGCCGCTCC 59.969 60.000 0.00 0.00 0.00 4.70
2500 5858 0.741326 TGAGACAGACATAGCCGCTC 59.259 55.000 0.00 0.00 0.00 5.03
2501 5859 0.457851 GTGAGACAGACATAGCCGCT 59.542 55.000 0.00 0.00 0.00 5.52
2502 5860 0.528684 GGTGAGACAGACATAGCCGC 60.529 60.000 0.00 0.00 0.00 6.53
2503 5861 1.107114 AGGTGAGACAGACATAGCCG 58.893 55.000 0.00 0.00 0.00 5.52
2504 5862 3.618690 AAAGGTGAGACAGACATAGCC 57.381 47.619 0.00 0.00 0.00 3.93
2505 5863 5.967088 TCTAAAAGGTGAGACAGACATAGC 58.033 41.667 0.00 0.00 0.00 2.97
2506 5864 7.397892 TCTCTAAAAGGTGAGACAGACATAG 57.602 40.000 0.00 0.00 34.77 2.23
2507 5865 6.127591 GCTCTCTAAAAGGTGAGACAGACATA 60.128 42.308 0.00 0.00 35.70 2.29
2508 5866 5.337169 GCTCTCTAAAAGGTGAGACAGACAT 60.337 44.000 0.00 0.00 35.70 3.06
2509 5867 4.021894 GCTCTCTAAAAGGTGAGACAGACA 60.022 45.833 0.00 0.00 35.70 3.41
2510 5868 4.219725 AGCTCTCTAAAAGGTGAGACAGAC 59.780 45.833 0.00 0.00 35.70 3.51
2511 5869 4.411927 AGCTCTCTAAAAGGTGAGACAGA 58.588 43.478 0.00 0.00 35.70 3.41
2512 5870 4.799564 AGCTCTCTAAAAGGTGAGACAG 57.200 45.455 0.00 0.00 35.70 3.51
2513 5871 5.552870 AAAGCTCTCTAAAAGGTGAGACA 57.447 39.130 0.00 0.00 35.70 3.41
2514 5872 5.180304 CCAAAAGCTCTCTAAAAGGTGAGAC 59.820 44.000 0.00 0.00 35.70 3.36
2515 5873 5.163195 ACCAAAAGCTCTCTAAAAGGTGAGA 60.163 40.000 0.00 0.00 37.69 3.27
2516 5874 5.066593 ACCAAAAGCTCTCTAAAAGGTGAG 58.933 41.667 0.00 0.00 0.00 3.51
2517 5875 5.048846 ACCAAAAGCTCTCTAAAAGGTGA 57.951 39.130 0.00 0.00 0.00 4.02
2518 5876 5.774498 AACCAAAAGCTCTCTAAAAGGTG 57.226 39.130 0.00 0.00 0.00 4.00
2519 5877 6.791867 AAAACCAAAAGCTCTCTAAAAGGT 57.208 33.333 0.00 0.00 0.00 3.50
2520 5878 7.492524 AGAAAAACCAAAAGCTCTCTAAAAGG 58.507 34.615 0.00 0.00 0.00 3.11
2521 5879 8.932945 AAGAAAAACCAAAAGCTCTCTAAAAG 57.067 30.769 0.00 0.00 0.00 2.27
2522 5880 9.719355 AAAAGAAAAACCAAAAGCTCTCTAAAA 57.281 25.926 0.00 0.00 0.00 1.52
2523 5881 9.366216 GAAAAGAAAAACCAAAAGCTCTCTAAA 57.634 29.630 0.00 0.00 0.00 1.85
2524 5882 8.749354 AGAAAAGAAAAACCAAAAGCTCTCTAA 58.251 29.630 0.00 0.00 0.00 2.10
2525 5883 8.293699 AGAAAAGAAAAACCAAAAGCTCTCTA 57.706 30.769 0.00 0.00 0.00 2.43
2526 5884 7.175347 AGAAAAGAAAAACCAAAAGCTCTCT 57.825 32.000 0.00 0.00 0.00 3.10
2527 5885 7.834068 AAGAAAAGAAAAACCAAAAGCTCTC 57.166 32.000 0.00 0.00 0.00 3.20
2528 5886 8.621532 AAAAGAAAAGAAAAACCAAAAGCTCT 57.378 26.923 0.00 0.00 0.00 4.09
2529 5887 8.721478 AGAAAAGAAAAGAAAAACCAAAAGCTC 58.279 29.630 0.00 0.00 0.00 4.09
2530 5888 8.621532 AGAAAAGAAAAGAAAAACCAAAAGCT 57.378 26.923 0.00 0.00 0.00 3.74
2531 5889 8.721478 AGAGAAAAGAAAAGAAAAACCAAAAGC 58.279 29.630 0.00 0.00 0.00 3.51
2533 5891 9.554395 ACAGAGAAAAGAAAAGAAAAACCAAAA 57.446 25.926 0.00 0.00 0.00 2.44
2534 5892 9.554395 AACAGAGAAAAGAAAAGAAAAACCAAA 57.446 25.926 0.00 0.00 0.00 3.28
2535 5893 9.554395 AAACAGAGAAAAGAAAAGAAAAACCAA 57.446 25.926 0.00 0.00 0.00 3.67
2536 5894 9.554395 AAAACAGAGAAAAGAAAAGAAAAACCA 57.446 25.926 0.00 0.00 0.00 3.67
2543 5901 9.901172 AGGTAGTAAAACAGAGAAAAGAAAAGA 57.099 29.630 0.00 0.00 0.00 2.52
2545 5903 9.117183 GGAGGTAGTAAAACAGAGAAAAGAAAA 57.883 33.333 0.00 0.00 0.00 2.29
2546 5904 8.269317 TGGAGGTAGTAAAACAGAGAAAAGAAA 58.731 33.333 0.00 0.00 0.00 2.52
2547 5905 7.798071 TGGAGGTAGTAAAACAGAGAAAAGAA 58.202 34.615 0.00 0.00 0.00 2.52
2548 5906 7.369551 TGGAGGTAGTAAAACAGAGAAAAGA 57.630 36.000 0.00 0.00 0.00 2.52
2549 5907 8.622948 AATGGAGGTAGTAAAACAGAGAAAAG 57.377 34.615 0.00 0.00 0.00 2.27
2550 5908 7.664318 GGAATGGAGGTAGTAAAACAGAGAAAA 59.336 37.037 0.00 0.00 0.00 2.29
2551 5909 7.017254 AGGAATGGAGGTAGTAAAACAGAGAAA 59.983 37.037 0.00 0.00 0.00 2.52
2552 5910 6.500751 AGGAATGGAGGTAGTAAAACAGAGAA 59.499 38.462 0.00 0.00 0.00 2.87
2553 5911 6.023603 AGGAATGGAGGTAGTAAAACAGAGA 58.976 40.000 0.00 0.00 0.00 3.10
2554 5912 6.301169 AGGAATGGAGGTAGTAAAACAGAG 57.699 41.667 0.00 0.00 0.00 3.35
2555 5913 7.801893 TTAGGAATGGAGGTAGTAAAACAGA 57.198 36.000 0.00 0.00 0.00 3.41
2566 5924 9.322769 ACGTCTTATATATTTAGGAATGGAGGT 57.677 33.333 0.00 0.00 0.00 3.85
2569 5927 9.938280 CCAACGTCTTATATATTTAGGAATGGA 57.062 33.333 0.00 0.00 0.00 3.41
2570 5928 9.162764 CCCAACGTCTTATATATTTAGGAATGG 57.837 37.037 0.00 0.00 0.00 3.16
2571 5929 9.162764 CCCCAACGTCTTATATATTTAGGAATG 57.837 37.037 0.00 0.00 0.00 2.67
2572 5930 7.827729 GCCCCAACGTCTTATATATTTAGGAAT 59.172 37.037 0.00 0.00 0.00 3.01
2573 5931 7.163441 GCCCCAACGTCTTATATATTTAGGAA 58.837 38.462 0.00 0.00 0.00 3.36
2574 5932 6.270463 TGCCCCAACGTCTTATATATTTAGGA 59.730 38.462 0.00 0.00 0.00 2.94
2575 5933 6.469410 TGCCCCAACGTCTTATATATTTAGG 58.531 40.000 0.00 0.00 0.00 2.69
2576 5934 7.159372 ACTGCCCCAACGTCTTATATATTTAG 58.841 38.462 0.00 0.00 0.00 1.85
2577 5935 7.069877 ACTGCCCCAACGTCTTATATATTTA 57.930 36.000 0.00 0.00 0.00 1.40
2578 5936 5.937111 ACTGCCCCAACGTCTTATATATTT 58.063 37.500 0.00 0.00 0.00 1.40
2579 5937 5.562298 ACTGCCCCAACGTCTTATATATT 57.438 39.130 0.00 0.00 0.00 1.28
2580 5938 5.562298 AACTGCCCCAACGTCTTATATAT 57.438 39.130 0.00 0.00 0.00 0.86
2581 5939 5.104859 TGAAACTGCCCCAACGTCTTATATA 60.105 40.000 0.00 0.00 0.00 0.86
2582 5940 3.926058 AACTGCCCCAACGTCTTATAT 57.074 42.857 0.00 0.00 0.00 0.86
2583 5941 3.008157 TGAAACTGCCCCAACGTCTTATA 59.992 43.478 0.00 0.00 0.00 0.98
2584 5942 2.224670 TGAAACTGCCCCAACGTCTTAT 60.225 45.455 0.00 0.00 0.00 1.73
2585 5943 1.141254 TGAAACTGCCCCAACGTCTTA 59.859 47.619 0.00 0.00 0.00 2.10
2586 5944 0.106918 TGAAACTGCCCCAACGTCTT 60.107 50.000 0.00 0.00 0.00 3.01
2587 5945 0.106918 TTGAAACTGCCCCAACGTCT 60.107 50.000 0.00 0.00 0.00 4.18
2588 5946 0.958822 ATTGAAACTGCCCCAACGTC 59.041 50.000 0.00 0.00 0.00 4.34
2589 5947 1.408969 AATTGAAACTGCCCCAACGT 58.591 45.000 0.00 0.00 0.00 3.99
2590 5948 3.651803 TTAATTGAAACTGCCCCAACG 57.348 42.857 0.00 0.00 0.00 4.10
2591 5949 4.698575 TGTTTAATTGAAACTGCCCCAAC 58.301 39.130 0.00 0.00 46.53 3.77
2592 5950 5.306678 AGATGTTTAATTGAAACTGCCCCAA 59.693 36.000 0.00 0.00 46.53 4.12
2593 5951 4.837860 AGATGTTTAATTGAAACTGCCCCA 59.162 37.500 0.00 0.00 46.53 4.96
2594 5952 5.405935 AGATGTTTAATTGAAACTGCCCC 57.594 39.130 0.00 0.00 46.53 5.80
2595 5953 5.047377 TGGAGATGTTTAATTGAAACTGCCC 60.047 40.000 0.00 0.00 46.53 5.36
2596 5954 6.024552 TGGAGATGTTTAATTGAAACTGCC 57.975 37.500 0.00 0.00 46.53 4.85
2597 5955 6.088085 CGTTGGAGATGTTTAATTGAAACTGC 59.912 38.462 0.00 0.00 46.53 4.40
2598 5956 7.138736 ACGTTGGAGATGTTTAATTGAAACTG 58.861 34.615 0.00 0.00 46.53 3.16
2599 5957 7.228706 AGACGTTGGAGATGTTTAATTGAAACT 59.771 33.333 0.00 0.00 46.53 2.66
2600 5958 7.360361 AGACGTTGGAGATGTTTAATTGAAAC 58.640 34.615 0.00 0.00 46.57 2.78
2601 5959 7.504924 AGACGTTGGAGATGTTTAATTGAAA 57.495 32.000 0.00 0.00 0.00 2.69
2602 5960 7.504924 AAGACGTTGGAGATGTTTAATTGAA 57.495 32.000 0.00 0.00 0.00 2.69
2603 5961 8.786826 ATAAGACGTTGGAGATGTTTAATTGA 57.213 30.769 0.00 0.00 0.00 2.57
2608 5966 9.878667 TGAAATATAAGACGTTGGAGATGTTTA 57.121 29.630 0.00 0.00 0.00 2.01
2609 5967 8.786826 TGAAATATAAGACGTTGGAGATGTTT 57.213 30.769 0.00 0.00 0.00 2.83
2610 5968 8.786826 TTGAAATATAAGACGTTGGAGATGTT 57.213 30.769 0.00 0.00 0.00 2.71
2611 5969 8.786826 TTTGAAATATAAGACGTTGGAGATGT 57.213 30.769 0.00 0.00 0.00 3.06
2667 6025 9.973450 TGTGCAAACATTTATTTAACACTACAT 57.027 25.926 0.00 0.00 32.76 2.29
2668 6026 9.803315 TTGTGCAAACATTTATTTAACACTACA 57.197 25.926 0.00 0.00 32.76 2.74
2671 6029 8.940768 AGTTGTGCAAACATTTATTTAACACT 57.059 26.923 12.28 0.00 32.76 3.55
2672 6030 9.980780 AAAGTTGTGCAAACATTTATTTAACAC 57.019 25.926 12.28 0.00 32.44 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.