Multiple sequence alignment - TraesCS4B01G396700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G396700 chr4B 100.000 2608 0 0 1 2608 671142471 671139864 0.000000e+00 4817.0
1 TraesCS4B01G396700 chr5A 98.956 2011 19 2 600 2608 444707278 444709288 0.000000e+00 3596.0
2 TraesCS4B01G396700 chr3A 98.955 2010 18 3 601 2608 700013785 700015793 0.000000e+00 3592.0
3 TraesCS4B01G396700 chr2A 98.708 2012 23 3 600 2608 757901030 757903041 0.000000e+00 3568.0
4 TraesCS4B01G396700 chr2B 98.706 2010 23 3 601 2608 175530608 175528600 0.000000e+00 3565.0
5 TraesCS4B01G396700 chr7B 98.656 2009 25 2 601 2608 653637455 653639462 0.000000e+00 3559.0
6 TraesCS4B01G396700 chr7B 98.412 2015 28 4 596 2608 746072508 746070496 0.000000e+00 3541.0
7 TraesCS4B01G396700 chr7B 98.408 2010 30 2 601 2608 653557635 653559644 0.000000e+00 3533.0
8 TraesCS4B01G396700 chr6A 98.358 2010 26 5 601 2608 6418765 6420769 0.000000e+00 3522.0
9 TraesCS4B01G396700 chr1A 98.311 2013 27 5 600 2607 418094246 418092236 0.000000e+00 3522.0
10 TraesCS4B01G396700 chr1A 87.500 80 7 3 501 580 234509187 234509111 3.570000e-14 89.8
11 TraesCS4B01G396700 chr1A 86.250 80 8 3 501 580 234547638 234547562 1.660000e-12 84.2
12 TraesCS4B01G396700 chr3D 85.057 87 9 2 492 578 456099455 456099373 4.620000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G396700 chr4B 671139864 671142471 2607 True 4817 4817 100.000 1 2608 1 chr4B.!!$R1 2607
1 TraesCS4B01G396700 chr5A 444707278 444709288 2010 False 3596 3596 98.956 600 2608 1 chr5A.!!$F1 2008
2 TraesCS4B01G396700 chr3A 700013785 700015793 2008 False 3592 3592 98.955 601 2608 1 chr3A.!!$F1 2007
3 TraesCS4B01G396700 chr2A 757901030 757903041 2011 False 3568 3568 98.708 600 2608 1 chr2A.!!$F1 2008
4 TraesCS4B01G396700 chr2B 175528600 175530608 2008 True 3565 3565 98.706 601 2608 1 chr2B.!!$R1 2007
5 TraesCS4B01G396700 chr7B 653637455 653639462 2007 False 3559 3559 98.656 601 2608 1 chr7B.!!$F2 2007
6 TraesCS4B01G396700 chr7B 746070496 746072508 2012 True 3541 3541 98.412 596 2608 1 chr7B.!!$R1 2012
7 TraesCS4B01G396700 chr7B 653557635 653559644 2009 False 3533 3533 98.408 601 2608 1 chr7B.!!$F1 2007
8 TraesCS4B01G396700 chr6A 6418765 6420769 2004 False 3522 3522 98.358 601 2608 1 chr6A.!!$F1 2007
9 TraesCS4B01G396700 chr1A 418092236 418094246 2010 True 3522 3522 98.311 600 2607 1 chr1A.!!$R3 2007

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
188 189 0.036010 AGAAGTGATGGCAACGGGAG 60.036 55.0 0.00 0.0 42.51 4.30 F
232 233 0.110147 ATCGATCGCACTAGCTACGC 60.110 55.0 11.09 0.0 39.10 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1028 1029 2.280389 CATAGCGCGGCCATGAGT 60.280 61.111 8.83 0.0 0.0 3.41 R
1715 1717 3.686726 GTGAAGAAGACATGCCGAATTCT 59.313 43.478 3.52 0.0 0.0 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.899239 CCTGGAGATGCCGCGGTC 62.899 72.222 28.70 17.76 40.66 4.79
20 21 3.842923 CTGGAGATGCCGCGGTCT 61.843 66.667 28.70 22.69 40.66 3.85
21 22 2.441348 TGGAGATGCCGCGGTCTA 60.441 61.111 28.70 11.53 40.66 2.59
22 23 2.336809 GGAGATGCCGCGGTCTAG 59.663 66.667 28.70 0.00 0.00 2.43
23 24 2.355244 GAGATGCCGCGGTCTAGC 60.355 66.667 28.70 16.28 0.00 3.42
31 32 4.436998 GCGGTCTAGCGCCACAGT 62.437 66.667 15.16 0.00 0.00 3.55
32 33 2.202623 CGGTCTAGCGCCACAGTC 60.203 66.667 2.29 0.00 0.00 3.51
33 34 2.184579 GGTCTAGCGCCACAGTCC 59.815 66.667 2.29 2.57 0.00 3.85
34 35 2.646175 GGTCTAGCGCCACAGTCCA 61.646 63.158 2.29 0.00 0.00 4.02
35 36 1.446272 GTCTAGCGCCACAGTCCAC 60.446 63.158 2.29 0.00 0.00 4.02
36 37 2.507102 CTAGCGCCACAGTCCACG 60.507 66.667 2.29 0.00 0.00 4.94
37 38 3.989698 CTAGCGCCACAGTCCACGG 62.990 68.421 2.29 0.00 0.00 4.94
41 42 3.357079 GCCACAGTCCACGGCAAG 61.357 66.667 0.00 0.00 45.52 4.01
42 43 2.669569 CCACAGTCCACGGCAAGG 60.670 66.667 0.00 0.00 0.00 3.61
43 44 2.669569 CACAGTCCACGGCAAGGG 60.670 66.667 0.00 0.00 0.00 3.95
44 45 2.847234 ACAGTCCACGGCAAGGGA 60.847 61.111 0.00 0.00 0.00 4.20
45 46 2.224159 ACAGTCCACGGCAAGGGAT 61.224 57.895 0.00 0.00 35.25 3.85
46 47 1.746615 CAGTCCACGGCAAGGGATG 60.747 63.158 0.00 0.00 35.25 3.51
56 57 2.187073 CAAGGGATGCAAGCTCACC 58.813 57.895 0.00 0.00 0.00 4.02
57 58 1.377725 AAGGGATGCAAGCTCACCG 60.378 57.895 0.00 0.00 0.00 4.94
58 59 2.825836 GGGATGCAAGCTCACCGG 60.826 66.667 0.00 0.00 0.00 5.28
59 60 2.045926 GGATGCAAGCTCACCGGT 60.046 61.111 0.00 0.00 0.00 5.28
60 61 2.401766 GGATGCAAGCTCACCGGTG 61.402 63.158 29.26 29.26 0.00 4.94
61 62 1.375908 GATGCAAGCTCACCGGTGA 60.376 57.895 34.13 34.13 38.06 4.02
62 63 0.745845 GATGCAAGCTCACCGGTGAT 60.746 55.000 36.21 21.18 39.13 3.06
63 64 1.028330 ATGCAAGCTCACCGGTGATG 61.028 55.000 36.21 30.30 39.13 3.07
64 65 2.401766 GCAAGCTCACCGGTGATGG 61.402 63.158 36.21 26.13 39.13 3.51
65 66 1.003355 CAAGCTCACCGGTGATGGT 60.003 57.895 36.21 29.02 45.21 3.55
71 72 3.646715 ACCGGTGATGGTGTGGGG 61.647 66.667 6.12 0.00 41.85 4.96
72 73 4.424711 CCGGTGATGGTGTGGGGG 62.425 72.222 0.00 0.00 0.00 5.40
73 74 3.326578 CGGTGATGGTGTGGGGGA 61.327 66.667 0.00 0.00 0.00 4.81
74 75 2.901281 CGGTGATGGTGTGGGGGAA 61.901 63.158 0.00 0.00 0.00 3.97
75 76 1.304134 GGTGATGGTGTGGGGGAAC 60.304 63.158 0.00 0.00 0.00 3.62
76 77 1.767692 GTGATGGTGTGGGGGAACT 59.232 57.895 0.00 0.00 0.00 3.01
77 78 0.609131 GTGATGGTGTGGGGGAACTG 60.609 60.000 0.00 0.00 0.00 3.16
78 79 1.678970 GATGGTGTGGGGGAACTGC 60.679 63.158 0.00 0.00 0.00 4.40
79 80 3.567579 ATGGTGTGGGGGAACTGCG 62.568 63.158 0.00 0.00 0.00 5.18
100 101 2.188207 GCATGCATGGCAATGGCA 59.812 55.556 27.34 12.96 43.62 4.92
117 118 4.574674 TGGCATGACCACTTTAGAGAAT 57.425 40.909 0.00 0.00 46.36 2.40
118 119 4.517285 TGGCATGACCACTTTAGAGAATC 58.483 43.478 0.00 0.00 46.36 2.52
119 120 4.019411 TGGCATGACCACTTTAGAGAATCA 60.019 41.667 0.00 0.00 46.36 2.57
120 121 4.574013 GGCATGACCACTTTAGAGAATCAG 59.426 45.833 0.00 0.00 36.22 2.90
121 122 5.423015 GCATGACCACTTTAGAGAATCAGA 58.577 41.667 0.00 0.00 37.82 3.27
122 123 5.523188 GCATGACCACTTTAGAGAATCAGAG 59.477 44.000 0.00 0.00 37.82 3.35
123 124 5.667539 TGACCACTTTAGAGAATCAGAGG 57.332 43.478 0.00 0.00 37.82 3.69
124 125 5.333581 TGACCACTTTAGAGAATCAGAGGA 58.666 41.667 0.00 0.00 37.82 3.71
125 126 5.780282 TGACCACTTTAGAGAATCAGAGGAA 59.220 40.000 0.00 0.00 37.82 3.36
126 127 6.270000 TGACCACTTTAGAGAATCAGAGGAAA 59.730 38.462 0.00 0.00 37.82 3.13
127 128 6.468543 ACCACTTTAGAGAATCAGAGGAAAC 58.531 40.000 0.00 0.00 37.82 2.78
128 129 5.578727 CCACTTTAGAGAATCAGAGGAAACG 59.421 44.000 0.00 0.00 37.82 3.60
129 130 5.578727 CACTTTAGAGAATCAGAGGAAACGG 59.421 44.000 0.00 0.00 37.82 4.44
130 131 4.737855 TTAGAGAATCAGAGGAAACGGG 57.262 45.455 0.00 0.00 37.82 5.28
131 132 1.834263 AGAGAATCAGAGGAAACGGGG 59.166 52.381 0.00 0.00 37.82 5.73
132 133 1.831736 GAGAATCAGAGGAAACGGGGA 59.168 52.381 0.00 0.00 33.17 4.81
133 134 1.834263 AGAATCAGAGGAAACGGGGAG 59.166 52.381 0.00 0.00 0.00 4.30
134 135 1.831736 GAATCAGAGGAAACGGGGAGA 59.168 52.381 0.00 0.00 0.00 3.71
135 136 1.490574 ATCAGAGGAAACGGGGAGAG 58.509 55.000 0.00 0.00 0.00 3.20
136 137 0.408309 TCAGAGGAAACGGGGAGAGA 59.592 55.000 0.00 0.00 0.00 3.10
137 138 1.203137 TCAGAGGAAACGGGGAGAGAA 60.203 52.381 0.00 0.00 0.00 2.87
138 139 1.623811 CAGAGGAAACGGGGAGAGAAA 59.376 52.381 0.00 0.00 0.00 2.52
139 140 1.903183 AGAGGAAACGGGGAGAGAAAG 59.097 52.381 0.00 0.00 0.00 2.62
140 141 1.900486 GAGGAAACGGGGAGAGAAAGA 59.100 52.381 0.00 0.00 0.00 2.52
141 142 1.903183 AGGAAACGGGGAGAGAAAGAG 59.097 52.381 0.00 0.00 0.00 2.85
142 143 1.900486 GGAAACGGGGAGAGAAAGAGA 59.100 52.381 0.00 0.00 0.00 3.10
143 144 2.302157 GGAAACGGGGAGAGAAAGAGAA 59.698 50.000 0.00 0.00 0.00 2.87
144 145 3.055021 GGAAACGGGGAGAGAAAGAGAAT 60.055 47.826 0.00 0.00 0.00 2.40
145 146 4.161754 GGAAACGGGGAGAGAAAGAGAATA 59.838 45.833 0.00 0.00 0.00 1.75
146 147 5.338137 GGAAACGGGGAGAGAAAGAGAATAA 60.338 44.000 0.00 0.00 0.00 1.40
147 148 5.346181 AACGGGGAGAGAAAGAGAATAAG 57.654 43.478 0.00 0.00 0.00 1.73
148 149 3.133183 ACGGGGAGAGAAAGAGAATAAGC 59.867 47.826 0.00 0.00 0.00 3.09
149 150 3.133003 CGGGGAGAGAAAGAGAATAAGCA 59.867 47.826 0.00 0.00 0.00 3.91
150 151 4.383118 CGGGGAGAGAAAGAGAATAAGCAA 60.383 45.833 0.00 0.00 0.00 3.91
151 152 5.686124 CGGGGAGAGAAAGAGAATAAGCAAT 60.686 44.000 0.00 0.00 0.00 3.56
152 153 6.125719 GGGGAGAGAAAGAGAATAAGCAATT 58.874 40.000 0.00 0.00 0.00 2.32
153 154 6.262049 GGGGAGAGAAAGAGAATAAGCAATTC 59.738 42.308 4.14 4.14 43.81 2.17
154 155 6.825721 GGGAGAGAAAGAGAATAAGCAATTCA 59.174 38.462 12.65 0.00 45.58 2.57
155 156 7.337942 GGGAGAGAAAGAGAATAAGCAATTCAA 59.662 37.037 12.65 0.00 45.58 2.69
156 157 8.397148 GGAGAGAAAGAGAATAAGCAATTCAAG 58.603 37.037 12.65 0.00 45.58 3.02
157 158 8.860780 AGAGAAAGAGAATAAGCAATTCAAGT 57.139 30.769 12.65 0.00 45.58 3.16
158 159 8.728833 AGAGAAAGAGAATAAGCAATTCAAGTG 58.271 33.333 12.65 0.00 45.58 3.16
159 160 7.311408 AGAAAGAGAATAAGCAATTCAAGTGC 58.689 34.615 0.29 0.29 45.58 4.40
160 161 6.579666 AAGAGAATAAGCAATTCAAGTGCA 57.420 33.333 13.16 0.00 45.58 4.57
161 162 6.770746 AGAGAATAAGCAATTCAAGTGCAT 57.229 33.333 13.16 2.12 45.58 3.96
162 163 7.870509 AGAGAATAAGCAATTCAAGTGCATA 57.129 32.000 13.16 4.75 45.58 3.14
163 164 7.928103 AGAGAATAAGCAATTCAAGTGCATAG 58.072 34.615 13.16 0.00 45.58 2.23
164 165 7.772292 AGAGAATAAGCAATTCAAGTGCATAGA 59.228 33.333 13.16 0.00 45.58 1.98
165 166 8.461249 AGAATAAGCAATTCAAGTGCATAGAT 57.539 30.769 13.16 0.00 45.58 1.98
166 167 8.350722 AGAATAAGCAATTCAAGTGCATAGATG 58.649 33.333 13.16 0.00 45.58 2.90
167 168 4.913335 AGCAATTCAAGTGCATAGATGG 57.087 40.909 13.16 0.00 44.74 3.51
168 169 4.529897 AGCAATTCAAGTGCATAGATGGA 58.470 39.130 13.16 0.00 44.74 3.41
169 170 4.951715 AGCAATTCAAGTGCATAGATGGAA 59.048 37.500 13.16 0.00 44.74 3.53
170 171 5.067413 AGCAATTCAAGTGCATAGATGGAAG 59.933 40.000 13.16 0.00 44.74 3.46
171 172 5.066893 GCAATTCAAGTGCATAGATGGAAGA 59.933 40.000 4.61 0.00 41.80 2.87
172 173 6.405065 GCAATTCAAGTGCATAGATGGAAGAA 60.405 38.462 4.61 0.00 41.80 2.52
173 174 6.939132 ATTCAAGTGCATAGATGGAAGAAG 57.061 37.500 0.00 0.00 0.00 2.85
174 175 5.426689 TCAAGTGCATAGATGGAAGAAGT 57.573 39.130 0.00 0.00 0.00 3.01
175 176 5.181009 TCAAGTGCATAGATGGAAGAAGTG 58.819 41.667 0.00 0.00 0.00 3.16
176 177 5.046376 TCAAGTGCATAGATGGAAGAAGTGA 60.046 40.000 0.00 0.00 0.00 3.41
177 178 5.627182 AGTGCATAGATGGAAGAAGTGAT 57.373 39.130 0.00 0.00 0.00 3.06
178 179 5.366460 AGTGCATAGATGGAAGAAGTGATG 58.634 41.667 0.00 0.00 0.00 3.07
179 180 4.514441 GTGCATAGATGGAAGAAGTGATGG 59.486 45.833 0.00 0.00 0.00 3.51
180 181 3.501445 GCATAGATGGAAGAAGTGATGGC 59.499 47.826 0.00 0.00 0.00 4.40
181 182 4.711399 CATAGATGGAAGAAGTGATGGCA 58.289 43.478 0.00 0.00 0.00 4.92
182 183 3.726557 AGATGGAAGAAGTGATGGCAA 57.273 42.857 0.00 0.00 0.00 4.52
183 184 3.350833 AGATGGAAGAAGTGATGGCAAC 58.649 45.455 0.00 0.00 0.00 4.17
184 185 1.522668 TGGAAGAAGTGATGGCAACG 58.477 50.000 0.00 0.00 42.51 4.10
185 186 0.804989 GGAAGAAGTGATGGCAACGG 59.195 55.000 0.00 0.00 42.51 4.44
186 187 0.804989 GAAGAAGTGATGGCAACGGG 59.195 55.000 0.00 0.00 42.51 5.28
187 188 0.400213 AAGAAGTGATGGCAACGGGA 59.600 50.000 0.00 0.00 42.51 5.14
188 189 0.036010 AGAAGTGATGGCAACGGGAG 60.036 55.000 0.00 0.00 42.51 4.30
190 191 0.606401 AAGTGATGGCAACGGGAGTG 60.606 55.000 0.00 0.00 46.69 3.51
191 192 1.003839 GTGATGGCAACGGGAGTGA 60.004 57.895 0.00 0.00 46.69 3.41
192 193 1.021390 GTGATGGCAACGGGAGTGAG 61.021 60.000 0.00 0.00 46.69 3.51
193 194 1.191489 TGATGGCAACGGGAGTGAGA 61.191 55.000 0.00 0.00 46.69 3.27
194 195 0.460987 GATGGCAACGGGAGTGAGAG 60.461 60.000 0.00 0.00 46.69 3.20
195 196 2.435059 GGCAACGGGAGTGAGAGC 60.435 66.667 0.00 0.00 46.69 4.09
196 197 2.811317 GCAACGGGAGTGAGAGCG 60.811 66.667 0.00 0.00 46.69 5.03
197 198 2.962569 CAACGGGAGTGAGAGCGA 59.037 61.111 0.00 0.00 46.69 4.93
198 199 1.444553 CAACGGGAGTGAGAGCGAC 60.445 63.158 0.00 0.00 46.69 5.19
199 200 1.901948 AACGGGAGTGAGAGCGACA 60.902 57.895 0.00 0.00 46.69 4.35
200 201 1.461091 AACGGGAGTGAGAGCGACAA 61.461 55.000 0.00 0.00 46.69 3.18
201 202 1.289066 CGGGAGTGAGAGCGACAAA 59.711 57.895 0.00 0.00 0.00 2.83
202 203 0.734253 CGGGAGTGAGAGCGACAAAG 60.734 60.000 0.00 0.00 0.00 2.77
203 204 0.390472 GGGAGTGAGAGCGACAAAGG 60.390 60.000 0.00 0.00 0.00 3.11
204 205 0.603569 GGAGTGAGAGCGACAAAGGA 59.396 55.000 0.00 0.00 0.00 3.36
205 206 1.000955 GGAGTGAGAGCGACAAAGGAA 59.999 52.381 0.00 0.00 0.00 3.36
206 207 2.333014 GAGTGAGAGCGACAAAGGAAG 58.667 52.381 0.00 0.00 0.00 3.46
207 208 1.964223 AGTGAGAGCGACAAAGGAAGA 59.036 47.619 0.00 0.00 0.00 2.87
208 209 2.365617 AGTGAGAGCGACAAAGGAAGAA 59.634 45.455 0.00 0.00 0.00 2.52
209 210 2.734079 GTGAGAGCGACAAAGGAAGAAG 59.266 50.000 0.00 0.00 0.00 2.85
210 211 2.365617 TGAGAGCGACAAAGGAAGAAGT 59.634 45.455 0.00 0.00 0.00 3.01
211 212 2.734079 GAGAGCGACAAAGGAAGAAGTG 59.266 50.000 0.00 0.00 0.00 3.16
212 213 1.195674 GAGCGACAAAGGAAGAAGTGC 59.804 52.381 0.00 0.00 0.00 4.40
213 214 0.944386 GCGACAAAGGAAGAAGTGCA 59.056 50.000 0.00 0.00 0.00 4.57
214 215 1.537202 GCGACAAAGGAAGAAGTGCAT 59.463 47.619 0.00 0.00 0.00 3.96
215 216 2.413371 GCGACAAAGGAAGAAGTGCATC 60.413 50.000 0.00 0.00 0.00 3.91
216 217 2.159787 CGACAAAGGAAGAAGTGCATCG 60.160 50.000 0.00 0.00 0.00 3.84
217 218 3.067106 GACAAAGGAAGAAGTGCATCGA 58.933 45.455 0.00 0.00 0.00 3.59
218 219 3.679389 ACAAAGGAAGAAGTGCATCGAT 58.321 40.909 0.00 0.00 0.00 3.59
219 220 3.686726 ACAAAGGAAGAAGTGCATCGATC 59.313 43.478 0.00 0.00 0.00 3.69
220 221 2.215907 AGGAAGAAGTGCATCGATCG 57.784 50.000 9.36 9.36 0.00 3.69
221 222 0.579156 GGAAGAAGTGCATCGATCGC 59.421 55.000 11.09 11.42 0.00 4.58
222 223 1.280982 GAAGAAGTGCATCGATCGCA 58.719 50.000 11.09 15.52 36.94 5.10
227 228 4.326153 TGCATCGATCGCACTAGC 57.674 55.556 11.09 9.86 33.55 3.42
228 229 1.735973 TGCATCGATCGCACTAGCT 59.264 52.632 11.09 0.00 39.10 3.32
229 230 0.951558 TGCATCGATCGCACTAGCTA 59.048 50.000 11.09 0.00 39.10 3.32
230 231 1.332178 GCATCGATCGCACTAGCTAC 58.668 55.000 11.09 0.00 39.10 3.58
231 232 1.596703 CATCGATCGCACTAGCTACG 58.403 55.000 11.09 0.00 39.10 3.51
232 233 0.110147 ATCGATCGCACTAGCTACGC 60.110 55.000 11.09 0.00 39.10 4.42
233 234 1.158484 TCGATCGCACTAGCTACGCT 61.158 55.000 11.09 0.00 43.41 5.07
234 235 0.317103 CGATCGCACTAGCTACGCTT 60.317 55.000 0.26 0.00 40.44 4.68
235 236 1.124462 GATCGCACTAGCTACGCTTG 58.876 55.000 8.39 0.00 40.44 4.01
236 237 0.249073 ATCGCACTAGCTACGCTTGG 60.249 55.000 8.39 0.00 40.44 3.61
237 238 2.517450 CGCACTAGCTACGCTTGGC 61.517 63.158 8.39 0.00 40.44 4.52
238 239 1.447838 GCACTAGCTACGCTTGGCA 60.448 57.895 0.48 0.00 40.44 4.92
239 240 1.424493 GCACTAGCTACGCTTGGCAG 61.424 60.000 0.48 0.00 40.44 4.85
240 241 0.173481 CACTAGCTACGCTTGGCAGA 59.827 55.000 0.48 0.00 40.44 4.26
241 242 0.173708 ACTAGCTACGCTTGGCAGAC 59.826 55.000 0.48 0.00 40.44 3.51
242 243 0.528684 CTAGCTACGCTTGGCAGACC 60.529 60.000 0.48 0.00 40.44 3.85
255 256 4.233632 TGGCAGACCAATCATATGAACA 57.766 40.909 9.99 0.00 45.37 3.18
256 257 3.947196 TGGCAGACCAATCATATGAACAC 59.053 43.478 9.99 0.64 45.37 3.32
257 258 3.947196 GGCAGACCAATCATATGAACACA 59.053 43.478 9.99 0.00 35.26 3.72
258 259 4.398988 GGCAGACCAATCATATGAACACAA 59.601 41.667 9.99 0.00 35.26 3.33
259 260 5.105797 GGCAGACCAATCATATGAACACAAA 60.106 40.000 9.99 0.00 35.26 2.83
260 261 6.389091 GCAGACCAATCATATGAACACAAAA 58.611 36.000 9.99 0.00 0.00 2.44
261 262 6.529125 GCAGACCAATCATATGAACACAAAAG 59.471 38.462 9.99 0.00 0.00 2.27
262 263 7.031372 CAGACCAATCATATGAACACAAAAGG 58.969 38.462 9.99 5.70 0.00 3.11
263 264 6.721208 AGACCAATCATATGAACACAAAAGGT 59.279 34.615 9.99 8.61 0.00 3.50
264 265 7.233348 AGACCAATCATATGAACACAAAAGGTT 59.767 33.333 9.99 0.00 0.00 3.50
265 266 7.153985 ACCAATCATATGAACACAAAAGGTTG 58.846 34.615 9.99 5.55 40.84 3.77
266 267 7.015098 ACCAATCATATGAACACAAAAGGTTGA 59.985 33.333 9.99 0.00 38.20 3.18
267 268 7.543172 CCAATCATATGAACACAAAAGGTTGAG 59.457 37.037 9.99 0.00 38.20 3.02
268 269 7.765695 ATCATATGAACACAAAAGGTTGAGT 57.234 32.000 9.99 0.00 39.85 3.41
269 270 7.581213 TCATATGAACACAAAAGGTTGAGTT 57.419 32.000 1.98 2.55 46.90 3.01
270 271 7.424803 TCATATGAACACAAAAGGTTGAGTTG 58.575 34.615 1.98 0.00 45.09 3.16
271 272 5.913137 ATGAACACAAAAGGTTGAGTTGA 57.087 34.783 6.94 0.19 45.09 3.18
272 273 5.054390 TGAACACAAAAGGTTGAGTTGAC 57.946 39.130 6.94 0.00 45.09 3.18
273 274 4.520874 TGAACACAAAAGGTTGAGTTGACA 59.479 37.500 6.94 0.00 45.09 3.58
274 275 4.701956 ACACAAAAGGTTGAGTTGACAG 57.298 40.909 0.00 0.00 35.32 3.51
275 276 3.443681 ACACAAAAGGTTGAGTTGACAGG 59.556 43.478 0.00 0.00 35.32 4.00
276 277 3.694072 CACAAAAGGTTGAGTTGACAGGA 59.306 43.478 0.00 0.00 38.20 3.86
277 278 3.694566 ACAAAAGGTTGAGTTGACAGGAC 59.305 43.478 0.00 0.00 38.20 3.85
278 279 2.240493 AAGGTTGAGTTGACAGGACG 57.760 50.000 0.00 0.00 0.00 4.79
279 280 1.410004 AGGTTGAGTTGACAGGACGA 58.590 50.000 0.00 0.00 0.00 4.20
280 281 1.760613 AGGTTGAGTTGACAGGACGAA 59.239 47.619 0.00 0.00 0.00 3.85
281 282 1.865340 GGTTGAGTTGACAGGACGAAC 59.135 52.381 0.00 0.00 0.00 3.95
282 283 2.546778 GTTGAGTTGACAGGACGAACA 58.453 47.619 0.00 0.00 0.00 3.18
283 284 2.933906 GTTGAGTTGACAGGACGAACAA 59.066 45.455 0.00 0.00 0.00 2.83
284 285 3.469008 TGAGTTGACAGGACGAACAAT 57.531 42.857 0.00 0.00 0.00 2.71
285 286 3.390135 TGAGTTGACAGGACGAACAATC 58.610 45.455 0.00 0.00 0.00 2.67
286 287 2.737252 GAGTTGACAGGACGAACAATCC 59.263 50.000 0.00 0.00 36.38 3.01
287 288 1.459592 GTTGACAGGACGAACAATCCG 59.540 52.381 0.00 0.00 41.52 4.18
288 289 0.963225 TGACAGGACGAACAATCCGA 59.037 50.000 0.00 0.00 41.52 4.55
289 290 1.548719 TGACAGGACGAACAATCCGAT 59.451 47.619 0.00 0.00 41.52 4.18
290 291 2.194271 GACAGGACGAACAATCCGATC 58.806 52.381 0.00 0.00 41.52 3.69
291 292 1.200483 CAGGACGAACAATCCGATCG 58.800 55.000 8.51 8.51 44.79 3.69
292 293 1.100510 AGGACGAACAATCCGATCGA 58.899 50.000 18.66 2.91 42.10 3.59
293 294 1.681793 AGGACGAACAATCCGATCGAT 59.318 47.619 18.66 0.00 42.10 3.59
294 295 2.052157 GGACGAACAATCCGATCGATC 58.948 52.381 18.66 15.68 42.10 3.69
295 296 2.543031 GGACGAACAATCCGATCGATCA 60.543 50.000 24.40 7.06 42.10 2.92
296 297 3.113322 GACGAACAATCCGATCGATCAA 58.887 45.455 24.40 12.55 42.10 2.57
297 298 3.116300 ACGAACAATCCGATCGATCAAG 58.884 45.455 24.40 15.07 42.10 3.02
298 299 3.116300 CGAACAATCCGATCGATCAAGT 58.884 45.455 24.40 11.77 42.10 3.16
299 300 3.060940 CGAACAATCCGATCGATCAAGTG 60.061 47.826 24.40 20.93 42.10 3.16
300 301 3.801114 ACAATCCGATCGATCAAGTGA 57.199 42.857 24.40 14.62 0.00 3.41
301 302 4.327982 ACAATCCGATCGATCAAGTGAT 57.672 40.909 24.40 16.04 37.51 3.06
302 303 5.453567 ACAATCCGATCGATCAAGTGATA 57.546 39.130 24.40 2.50 34.37 2.15
303 304 6.030548 ACAATCCGATCGATCAAGTGATAT 57.969 37.500 24.40 9.58 34.37 1.63
304 305 6.096036 ACAATCCGATCGATCAAGTGATATC 58.904 40.000 24.40 0.00 34.37 1.63
305 306 6.071672 ACAATCCGATCGATCAAGTGATATCT 60.072 38.462 24.40 3.47 34.37 1.98
306 307 5.302357 TCCGATCGATCAAGTGATATCTG 57.698 43.478 24.40 4.13 34.37 2.90
307 308 4.156739 TCCGATCGATCAAGTGATATCTGG 59.843 45.833 24.40 12.64 34.37 3.86
308 309 3.856521 CGATCGATCAAGTGATATCTGGC 59.143 47.826 24.40 0.00 34.37 4.85
309 310 3.667497 TCGATCAAGTGATATCTGGCC 57.333 47.619 3.98 0.00 34.37 5.36
310 311 2.965147 TCGATCAAGTGATATCTGGCCA 59.035 45.455 4.71 4.71 34.37 5.36
311 312 3.006217 TCGATCAAGTGATATCTGGCCAG 59.994 47.826 27.87 27.87 34.37 4.85
312 313 3.006217 CGATCAAGTGATATCTGGCCAGA 59.994 47.826 36.73 36.73 37.04 3.86
313 314 3.827008 TCAAGTGATATCTGGCCAGAC 57.173 47.619 37.39 24.56 40.75 3.51
314 315 3.106827 TCAAGTGATATCTGGCCAGACA 58.893 45.455 37.39 28.42 40.75 3.41
315 316 3.519107 TCAAGTGATATCTGGCCAGACAA 59.481 43.478 37.39 27.42 40.75 3.18
316 317 3.550437 AGTGATATCTGGCCAGACAAC 57.450 47.619 37.39 28.32 40.75 3.32
317 318 3.110705 AGTGATATCTGGCCAGACAACT 58.889 45.455 37.39 29.84 40.75 3.16
318 319 3.133721 AGTGATATCTGGCCAGACAACTC 59.866 47.826 37.39 27.21 40.75 3.01
319 320 3.106827 TGATATCTGGCCAGACAACTCA 58.893 45.455 37.39 29.17 40.75 3.41
320 321 3.713248 TGATATCTGGCCAGACAACTCAT 59.287 43.478 37.39 21.74 40.75 2.90
321 322 2.414994 ATCTGGCCAGACAACTCATG 57.585 50.000 37.39 6.25 40.75 3.07
323 324 2.256306 TCTGGCCAGACAACTCATGTA 58.744 47.619 32.00 4.64 44.12 2.29
324 325 2.637382 TCTGGCCAGACAACTCATGTAA 59.363 45.455 32.00 4.40 44.12 2.41
325 326 3.072330 TCTGGCCAGACAACTCATGTAAA 59.928 43.478 32.00 3.90 44.12 2.01
326 327 3.411446 TGGCCAGACAACTCATGTAAAG 58.589 45.455 0.00 0.00 44.12 1.85
327 328 3.181445 TGGCCAGACAACTCATGTAAAGT 60.181 43.478 0.00 0.00 44.12 2.66
328 329 3.821033 GGCCAGACAACTCATGTAAAGTT 59.179 43.478 0.00 0.00 44.12 2.66
329 330 4.278419 GGCCAGACAACTCATGTAAAGTTT 59.722 41.667 0.00 0.00 44.12 2.66
330 331 5.215160 GCCAGACAACTCATGTAAAGTTTG 58.785 41.667 0.00 0.00 44.12 2.93
331 332 5.215160 CCAGACAACTCATGTAAAGTTTGC 58.785 41.667 0.00 0.00 44.12 3.68
332 333 5.009010 CCAGACAACTCATGTAAAGTTTGCT 59.991 40.000 5.27 0.00 44.12 3.91
333 334 5.911280 CAGACAACTCATGTAAAGTTTGCTG 59.089 40.000 5.27 2.15 44.12 4.41
334 335 5.822519 AGACAACTCATGTAAAGTTTGCTGA 59.177 36.000 5.27 5.70 44.12 4.26
335 336 6.017605 AGACAACTCATGTAAAGTTTGCTGAG 60.018 38.462 20.61 20.61 44.12 3.35
336 337 5.822519 ACAACTCATGTAAAGTTTGCTGAGA 59.177 36.000 25.06 12.90 41.63 3.27
337 338 6.318648 ACAACTCATGTAAAGTTTGCTGAGAA 59.681 34.615 25.06 2.84 41.63 2.87
338 339 6.942532 ACTCATGTAAAGTTTGCTGAGAAA 57.057 33.333 25.06 2.27 35.31 2.52
339 340 7.333528 ACTCATGTAAAGTTTGCTGAGAAAA 57.666 32.000 25.06 0.00 35.31 2.29
340 341 7.771183 ACTCATGTAAAGTTTGCTGAGAAAAA 58.229 30.769 25.06 1.14 35.31 1.94
341 342 8.416329 ACTCATGTAAAGTTTGCTGAGAAAAAT 58.584 29.630 25.06 10.78 35.31 1.82
342 343 9.897744 CTCATGTAAAGTTTGCTGAGAAAAATA 57.102 29.630 18.98 0.00 33.59 1.40
345 346 9.696917 ATGTAAAGTTTGCTGAGAAAAATAAGG 57.303 29.630 5.27 0.00 0.00 2.69
346 347 8.908903 TGTAAAGTTTGCTGAGAAAAATAAGGA 58.091 29.630 5.27 0.00 0.00 3.36
347 348 9.744468 GTAAAGTTTGCTGAGAAAAATAAGGAA 57.256 29.630 0.00 0.00 0.00 3.36
349 350 9.665719 AAAGTTTGCTGAGAAAAATAAGGAAAA 57.334 25.926 0.00 0.00 32.77 2.29
350 351 9.665719 AAGTTTGCTGAGAAAAATAAGGAAAAA 57.334 25.926 0.00 0.00 32.77 1.94
371 372 6.428385 AAAATAACTGATGCAGAGCTACAC 57.572 37.500 0.82 0.00 35.18 2.90
372 373 2.001812 AACTGATGCAGAGCTACACG 57.998 50.000 0.82 0.00 35.18 4.49
373 374 0.459237 ACTGATGCAGAGCTACACGC 60.459 55.000 0.82 0.00 35.18 5.34
374 375 1.477826 CTGATGCAGAGCTACACGCG 61.478 60.000 3.53 3.53 45.59 6.01
375 376 1.226688 GATGCAGAGCTACACGCGA 60.227 57.895 15.93 0.00 45.59 5.87
376 377 1.475441 GATGCAGAGCTACACGCGAC 61.475 60.000 15.93 0.00 45.59 5.19
377 378 1.938657 ATGCAGAGCTACACGCGACT 61.939 55.000 15.93 0.92 45.59 4.18
378 379 1.444553 GCAGAGCTACACGCGACTT 60.445 57.895 15.93 0.00 45.59 3.01
379 380 1.009389 GCAGAGCTACACGCGACTTT 61.009 55.000 15.93 0.00 45.59 2.66
380 381 1.419374 CAGAGCTACACGCGACTTTT 58.581 50.000 15.93 0.00 45.59 2.27
381 382 1.792949 CAGAGCTACACGCGACTTTTT 59.207 47.619 15.93 0.00 45.59 1.94
400 401 2.818130 TTTTCAGGAATTGCCACTGC 57.182 45.000 0.00 0.00 40.02 4.40
425 426 8.003508 CATGCATGCAGCTTTAATACTTATTG 57.996 34.615 26.69 9.34 45.94 1.90
426 427 7.099266 TGCATGCAGCTTTAATACTTATTGT 57.901 32.000 18.46 0.00 45.94 2.71
427 428 8.219546 TGCATGCAGCTTTAATACTTATTGTA 57.780 30.769 18.46 0.00 45.94 2.41
428 429 8.681806 TGCATGCAGCTTTAATACTTATTGTAA 58.318 29.630 18.46 0.00 45.94 2.41
429 430 9.683069 GCATGCAGCTTTAATACTTATTGTAAT 57.317 29.630 14.21 0.00 41.15 1.89
462 463 8.873186 ATTGACCATTTCATATATCTGCATGA 57.127 30.769 0.00 0.00 32.84 3.07
463 464 7.916914 TGACCATTTCATATATCTGCATGAG 57.083 36.000 0.00 0.00 32.96 2.90
464 465 7.455891 TGACCATTTCATATATCTGCATGAGT 58.544 34.615 0.00 0.00 32.96 3.41
465 466 7.389607 TGACCATTTCATATATCTGCATGAGTG 59.610 37.037 0.00 0.00 32.96 3.51
475 476 2.124983 CATGAGTGCAGGTCGGGG 60.125 66.667 0.00 0.00 0.00 5.73
476 477 2.284625 ATGAGTGCAGGTCGGGGA 60.285 61.111 0.00 0.00 0.00 4.81
477 478 1.690633 ATGAGTGCAGGTCGGGGAT 60.691 57.895 0.00 0.00 0.00 3.85
478 479 1.976132 ATGAGTGCAGGTCGGGGATG 61.976 60.000 0.00 0.00 0.00 3.51
479 480 2.284625 AGTGCAGGTCGGGGATGA 60.285 61.111 0.00 0.00 0.00 2.92
480 481 1.899437 GAGTGCAGGTCGGGGATGAA 61.899 60.000 0.00 0.00 0.00 2.57
481 482 1.450312 GTGCAGGTCGGGGATGAAG 60.450 63.158 0.00 0.00 0.00 3.02
482 483 1.612146 TGCAGGTCGGGGATGAAGA 60.612 57.895 0.00 0.00 0.00 2.87
483 484 1.198094 TGCAGGTCGGGGATGAAGAA 61.198 55.000 0.00 0.00 0.00 2.52
484 485 0.181350 GCAGGTCGGGGATGAAGAAT 59.819 55.000 0.00 0.00 0.00 2.40
485 486 1.959042 CAGGTCGGGGATGAAGAATG 58.041 55.000 0.00 0.00 0.00 2.67
486 487 1.486310 CAGGTCGGGGATGAAGAATGA 59.514 52.381 0.00 0.00 0.00 2.57
487 488 2.092968 CAGGTCGGGGATGAAGAATGAA 60.093 50.000 0.00 0.00 0.00 2.57
488 489 2.171448 AGGTCGGGGATGAAGAATGAAG 59.829 50.000 0.00 0.00 0.00 3.02
489 490 2.170607 GGTCGGGGATGAAGAATGAAGA 59.829 50.000 0.00 0.00 0.00 2.87
490 491 3.198872 GTCGGGGATGAAGAATGAAGAC 58.801 50.000 0.00 0.00 0.00 3.01
491 492 3.107601 TCGGGGATGAAGAATGAAGACT 58.892 45.455 0.00 0.00 0.00 3.24
492 493 4.099573 GTCGGGGATGAAGAATGAAGACTA 59.900 45.833 0.00 0.00 0.00 2.59
493 494 4.901849 TCGGGGATGAAGAATGAAGACTAT 59.098 41.667 0.00 0.00 0.00 2.12
494 495 6.015350 GTCGGGGATGAAGAATGAAGACTATA 60.015 42.308 0.00 0.00 0.00 1.31
495 496 6.553476 TCGGGGATGAAGAATGAAGACTATAA 59.447 38.462 0.00 0.00 0.00 0.98
496 497 6.647067 CGGGGATGAAGAATGAAGACTATAAC 59.353 42.308 0.00 0.00 0.00 1.89
497 498 6.937465 GGGGATGAAGAATGAAGACTATAACC 59.063 42.308 0.00 0.00 0.00 2.85
498 499 7.420214 GGGGATGAAGAATGAAGACTATAACCA 60.420 40.741 0.00 0.00 0.00 3.67
499 500 7.442666 GGGATGAAGAATGAAGACTATAACCAC 59.557 40.741 0.00 0.00 0.00 4.16
500 501 7.987458 GGATGAAGAATGAAGACTATAACCACA 59.013 37.037 0.00 0.00 0.00 4.17
501 502 9.553064 GATGAAGAATGAAGACTATAACCACAT 57.447 33.333 0.00 0.00 0.00 3.21
502 503 8.722480 TGAAGAATGAAGACTATAACCACATG 57.278 34.615 0.00 0.00 0.00 3.21
503 504 7.280876 TGAAGAATGAAGACTATAACCACATGC 59.719 37.037 0.00 0.00 0.00 4.06
504 505 6.058183 AGAATGAAGACTATAACCACATGCC 58.942 40.000 0.00 0.00 0.00 4.40
505 506 4.835284 TGAAGACTATAACCACATGCCA 57.165 40.909 0.00 0.00 0.00 4.92
506 507 5.372343 TGAAGACTATAACCACATGCCAT 57.628 39.130 0.00 0.00 0.00 4.40
507 508 5.125356 TGAAGACTATAACCACATGCCATG 58.875 41.667 2.40 2.40 0.00 3.66
508 509 4.778213 AGACTATAACCACATGCCATGT 57.222 40.909 4.03 4.03 46.22 3.21
522 523 2.996249 CCATGTGTGGTCAGCTATCT 57.004 50.000 0.00 0.00 40.83 1.98
523 524 2.831333 CCATGTGTGGTCAGCTATCTC 58.169 52.381 0.00 0.00 40.83 2.75
524 525 2.169144 CCATGTGTGGTCAGCTATCTCA 59.831 50.000 0.00 0.00 40.83 3.27
525 526 3.369787 CCATGTGTGGTCAGCTATCTCAA 60.370 47.826 0.00 0.00 40.83 3.02
526 527 3.599730 TGTGTGGTCAGCTATCTCAAG 57.400 47.619 0.00 0.00 0.00 3.02
527 528 2.899900 TGTGTGGTCAGCTATCTCAAGT 59.100 45.455 0.00 0.00 0.00 3.16
528 529 3.324846 TGTGTGGTCAGCTATCTCAAGTT 59.675 43.478 0.00 0.00 0.00 2.66
529 530 4.526650 TGTGTGGTCAGCTATCTCAAGTTA 59.473 41.667 0.00 0.00 0.00 2.24
530 531 5.011635 TGTGTGGTCAGCTATCTCAAGTTAA 59.988 40.000 0.00 0.00 0.00 2.01
531 532 5.578727 GTGTGGTCAGCTATCTCAAGTTAAG 59.421 44.000 0.00 0.00 0.00 1.85
532 533 5.246203 TGTGGTCAGCTATCTCAAGTTAAGT 59.754 40.000 0.00 0.00 0.00 2.24
533 534 6.166982 GTGGTCAGCTATCTCAAGTTAAGTT 58.833 40.000 0.00 0.00 0.00 2.66
534 535 7.039293 TGTGGTCAGCTATCTCAAGTTAAGTTA 60.039 37.037 0.00 0.00 0.00 2.24
535 536 7.275999 GTGGTCAGCTATCTCAAGTTAAGTTAC 59.724 40.741 0.00 0.00 0.00 2.50
536 537 7.178628 TGGTCAGCTATCTCAAGTTAAGTTACT 59.821 37.037 0.00 0.00 0.00 2.24
537 538 7.489757 GGTCAGCTATCTCAAGTTAAGTTACTG 59.510 40.741 0.00 0.00 0.00 2.74
538 539 8.244802 GTCAGCTATCTCAAGTTAAGTTACTGA 58.755 37.037 0.00 0.00 0.00 3.41
539 540 8.972127 TCAGCTATCTCAAGTTAAGTTACTGAT 58.028 33.333 0.00 3.26 0.00 2.90
540 541 9.029243 CAGCTATCTCAAGTTAAGTTACTGATG 57.971 37.037 0.00 0.00 0.00 3.07
541 542 8.972127 AGCTATCTCAAGTTAAGTTACTGATGA 58.028 33.333 0.00 0.00 0.00 2.92
542 543 9.243637 GCTATCTCAAGTTAAGTTACTGATGAG 57.756 37.037 0.00 0.00 35.65 2.90
555 556 9.725019 AAGTTACTGATGAGTATTTGATGTGAA 57.275 29.630 0.00 0.00 34.53 3.18
556 557 9.725019 AGTTACTGATGAGTATTTGATGTGAAA 57.275 29.630 0.00 0.00 34.53 2.69
557 558 9.979270 GTTACTGATGAGTATTTGATGTGAAAG 57.021 33.333 0.00 0.00 34.53 2.62
558 559 9.942850 TTACTGATGAGTATTTGATGTGAAAGA 57.057 29.630 0.00 0.00 34.53 2.52
559 560 8.853077 ACTGATGAGTATTTGATGTGAAAGAA 57.147 30.769 0.00 0.00 0.00 2.52
560 561 8.944029 ACTGATGAGTATTTGATGTGAAAGAAG 58.056 33.333 0.00 0.00 0.00 2.85
561 562 9.159364 CTGATGAGTATTTGATGTGAAAGAAGA 57.841 33.333 0.00 0.00 0.00 2.87
562 563 9.506018 TGATGAGTATTTGATGTGAAAGAAGAA 57.494 29.630 0.00 0.00 0.00 2.52
563 564 9.985318 GATGAGTATTTGATGTGAAAGAAGAAG 57.015 33.333 0.00 0.00 0.00 2.85
564 565 8.327941 TGAGTATTTGATGTGAAAGAAGAAGG 57.672 34.615 0.00 0.00 0.00 3.46
565 566 8.156820 TGAGTATTTGATGTGAAAGAAGAAGGA 58.843 33.333 0.00 0.00 0.00 3.36
566 567 8.558973 AGTATTTGATGTGAAAGAAGAAGGAG 57.441 34.615 0.00 0.00 0.00 3.69
567 568 6.830873 ATTTGATGTGAAAGAAGAAGGAGG 57.169 37.500 0.00 0.00 0.00 4.30
568 569 5.567037 TTGATGTGAAAGAAGAAGGAGGA 57.433 39.130 0.00 0.00 0.00 3.71
569 570 5.567037 TGATGTGAAAGAAGAAGGAGGAA 57.433 39.130 0.00 0.00 0.00 3.36
570 571 5.940617 TGATGTGAAAGAAGAAGGAGGAAA 58.059 37.500 0.00 0.00 0.00 3.13
571 572 6.364701 TGATGTGAAAGAAGAAGGAGGAAAA 58.635 36.000 0.00 0.00 0.00 2.29
572 573 6.488006 TGATGTGAAAGAAGAAGGAGGAAAAG 59.512 38.462 0.00 0.00 0.00 2.27
573 574 6.001449 TGTGAAAGAAGAAGGAGGAAAAGA 57.999 37.500 0.00 0.00 0.00 2.52
574 575 6.423182 TGTGAAAGAAGAAGGAGGAAAAGAA 58.577 36.000 0.00 0.00 0.00 2.52
575 576 6.889722 TGTGAAAGAAGAAGGAGGAAAAGAAA 59.110 34.615 0.00 0.00 0.00 2.52
576 577 7.396055 TGTGAAAGAAGAAGGAGGAAAAGAAAA 59.604 33.333 0.00 0.00 0.00 2.29
577 578 8.251026 GTGAAAGAAGAAGGAGGAAAAGAAAAA 58.749 33.333 0.00 0.00 0.00 1.94
578 579 8.470002 TGAAAGAAGAAGGAGGAAAAGAAAAAG 58.530 33.333 0.00 0.00 0.00 2.27
579 580 8.595362 AAAGAAGAAGGAGGAAAAGAAAAAGA 57.405 30.769 0.00 0.00 0.00 2.52
580 581 7.815840 AGAAGAAGGAGGAAAAGAAAAAGAG 57.184 36.000 0.00 0.00 0.00 2.85
581 582 7.578203 AGAAGAAGGAGGAAAAGAAAAAGAGA 58.422 34.615 0.00 0.00 0.00 3.10
582 583 8.055790 AGAAGAAGGAGGAAAAGAAAAAGAGAA 58.944 33.333 0.00 0.00 0.00 2.87
583 584 8.774546 AAGAAGGAGGAAAAGAAAAAGAGAAT 57.225 30.769 0.00 0.00 0.00 2.40
584 585 8.175925 AGAAGGAGGAAAAGAAAAAGAGAATG 57.824 34.615 0.00 0.00 0.00 2.67
585 586 8.001292 AGAAGGAGGAAAAGAAAAAGAGAATGA 58.999 33.333 0.00 0.00 0.00 2.57
586 587 8.539117 AAGGAGGAAAAGAAAAAGAGAATGAA 57.461 30.769 0.00 0.00 0.00 2.57
587 588 8.175925 AGGAGGAAAAGAAAAAGAGAATGAAG 57.824 34.615 0.00 0.00 0.00 3.02
588 589 6.865726 GGAGGAAAAGAAAAAGAGAATGAAGC 59.134 38.462 0.00 0.00 0.00 3.86
589 590 6.753180 AGGAAAAGAAAAAGAGAATGAAGCC 58.247 36.000 0.00 0.00 0.00 4.35
590 591 6.552725 AGGAAAAGAAAAAGAGAATGAAGCCT 59.447 34.615 0.00 0.00 0.00 4.58
591 592 7.725844 AGGAAAAGAAAAAGAGAATGAAGCCTA 59.274 33.333 0.00 0.00 0.00 3.93
592 593 8.526978 GGAAAAGAAAAAGAGAATGAAGCCTAT 58.473 33.333 0.00 0.00 0.00 2.57
717 718 1.257750 TAGCTCCCATGCGACACTGT 61.258 55.000 0.00 0.00 38.13 3.55
1328 1329 4.263905 ACCCATTTTGAGTGGCTAGATGAA 60.264 41.667 0.00 0.00 35.35 2.57
1715 1717 5.425577 TGAATAAAAGTGTTGCGCTGTAA 57.574 34.783 9.73 0.00 0.00 2.41
2006 2013 2.755952 AGTTTCCTGCCTTCACCTTT 57.244 45.000 0.00 0.00 0.00 3.11
2078 2086 0.524816 CGTGTCCGATTGTAGGGTCG 60.525 60.000 0.00 0.00 37.58 4.79
2089 2101 0.939419 GTAGGGTCGCGTGTTGTTTT 59.061 50.000 5.77 0.00 0.00 2.43
2342 2355 4.079253 GCAATGGAGAAACTTTAGGACCA 58.921 43.478 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.899239 GACCGCGGCATCTCCAGG 62.899 72.222 28.58 0.00 38.02 4.45
4 5 2.441348 TAGACCGCGGCATCTCCA 60.441 61.111 28.58 4.43 34.01 3.86
5 6 2.336809 CTAGACCGCGGCATCTCC 59.663 66.667 28.58 7.62 0.00 3.71
6 7 2.355244 GCTAGACCGCGGCATCTC 60.355 66.667 28.58 15.93 0.00 2.75
15 16 2.202623 GACTGTGGCGCTAGACCG 60.203 66.667 7.64 0.92 0.00 4.79
16 17 2.184579 GGACTGTGGCGCTAGACC 59.815 66.667 7.64 9.78 0.00 3.85
17 18 1.446272 GTGGACTGTGGCGCTAGAC 60.446 63.158 7.64 2.25 0.00 2.59
18 19 2.970639 GTGGACTGTGGCGCTAGA 59.029 61.111 7.64 0.00 0.00 2.43
19 20 2.507102 CGTGGACTGTGGCGCTAG 60.507 66.667 7.64 6.33 0.00 3.42
20 21 4.063967 CCGTGGACTGTGGCGCTA 62.064 66.667 7.64 0.00 0.00 4.26
25 26 2.669569 CCTTGCCGTGGACTGTGG 60.670 66.667 0.00 0.00 0.00 4.17
26 27 2.469465 ATCCCTTGCCGTGGACTGTG 62.469 60.000 0.00 0.00 32.36 3.66
27 28 2.224159 ATCCCTTGCCGTGGACTGT 61.224 57.895 0.00 0.00 32.36 3.55
28 29 1.746615 CATCCCTTGCCGTGGACTG 60.747 63.158 0.00 0.00 32.36 3.51
29 30 2.671070 CATCCCTTGCCGTGGACT 59.329 61.111 0.00 0.00 32.36 3.85
30 31 3.134127 GCATCCCTTGCCGTGGAC 61.134 66.667 0.00 0.00 46.15 4.02
38 39 1.651240 CGGTGAGCTTGCATCCCTTG 61.651 60.000 0.00 0.00 0.00 3.61
39 40 1.377725 CGGTGAGCTTGCATCCCTT 60.378 57.895 0.00 0.00 0.00 3.95
40 41 2.270205 CGGTGAGCTTGCATCCCT 59.730 61.111 0.00 0.00 0.00 4.20
41 42 2.825836 CCGGTGAGCTTGCATCCC 60.826 66.667 0.00 0.00 0.00 3.85
42 43 2.045926 ACCGGTGAGCTTGCATCC 60.046 61.111 6.12 0.00 0.00 3.51
43 44 0.745845 ATCACCGGTGAGCTTGCATC 60.746 55.000 37.98 0.00 43.61 3.91
44 45 1.028330 CATCACCGGTGAGCTTGCAT 61.028 55.000 37.98 20.02 43.61 3.96
45 46 1.672030 CATCACCGGTGAGCTTGCA 60.672 57.895 37.98 17.40 43.61 4.08
46 47 2.401766 CCATCACCGGTGAGCTTGC 61.402 63.158 37.98 0.00 43.61 4.01
47 48 1.003355 ACCATCACCGGTGAGCTTG 60.003 57.895 37.98 30.49 43.61 4.01
48 49 3.483587 ACCATCACCGGTGAGCTT 58.516 55.556 37.98 22.26 43.61 3.74
54 55 3.646715 CCCCACACCATCACCGGT 61.647 66.667 0.00 0.00 41.07 5.28
55 56 4.424711 CCCCCACACCATCACCGG 62.425 72.222 0.00 0.00 0.00 5.28
56 57 2.901281 TTCCCCCACACCATCACCG 61.901 63.158 0.00 0.00 0.00 4.94
57 58 1.304134 GTTCCCCCACACCATCACC 60.304 63.158 0.00 0.00 0.00 4.02
58 59 0.609131 CAGTTCCCCCACACCATCAC 60.609 60.000 0.00 0.00 0.00 3.06
59 60 1.767036 CAGTTCCCCCACACCATCA 59.233 57.895 0.00 0.00 0.00 3.07
60 61 1.678970 GCAGTTCCCCCACACCATC 60.679 63.158 0.00 0.00 0.00 3.51
61 62 2.440599 GCAGTTCCCCCACACCAT 59.559 61.111 0.00 0.00 0.00 3.55
62 63 4.263572 CGCAGTTCCCCCACACCA 62.264 66.667 0.00 0.00 0.00 4.17
79 80 4.230002 ATTGCCATGCATGCCCGC 62.230 61.111 21.69 18.83 38.76 6.13
80 81 2.279851 CATTGCCATGCATGCCCG 60.280 61.111 21.69 9.08 38.76 6.13
81 82 2.110213 CCATTGCCATGCATGCCC 59.890 61.111 21.69 14.07 38.76 5.36
82 83 2.590575 GCCATTGCCATGCATGCC 60.591 61.111 21.69 11.44 38.76 4.40
83 84 1.227823 ATGCCATTGCCATGCATGC 60.228 52.632 21.69 11.82 38.76 4.06
84 85 0.105778 TCATGCCATTGCCATGCATG 59.894 50.000 20.19 20.19 41.49 4.06
85 86 0.105964 GTCATGCCATTGCCATGCAT 59.894 50.000 2.79 0.00 38.76 3.96
86 87 1.518302 GTCATGCCATTGCCATGCA 59.482 52.632 2.79 0.00 36.47 3.96
87 88 1.227438 GGTCATGCCATTGCCATGC 60.227 57.895 2.79 0.00 37.17 4.06
88 89 2.203806 TGGTCATGCCATTGCCATG 58.796 52.632 1.23 1.23 43.61 3.66
89 90 4.789899 TGGTCATGCCATTGCCAT 57.210 50.000 4.93 0.00 43.61 4.40
96 97 4.019411 TGATTCTCTAAAGTGGTCATGCCA 60.019 41.667 4.93 4.93 46.95 4.92
97 98 4.517285 TGATTCTCTAAAGTGGTCATGCC 58.483 43.478 0.00 0.00 37.90 4.40
98 99 5.423015 TCTGATTCTCTAAAGTGGTCATGC 58.577 41.667 0.00 0.00 0.00 4.06
99 100 6.047870 CCTCTGATTCTCTAAAGTGGTCATG 58.952 44.000 0.00 0.00 0.00 3.07
100 101 5.960811 TCCTCTGATTCTCTAAAGTGGTCAT 59.039 40.000 0.00 0.00 0.00 3.06
101 102 5.333581 TCCTCTGATTCTCTAAAGTGGTCA 58.666 41.667 0.00 0.00 0.00 4.02
102 103 5.923733 TCCTCTGATTCTCTAAAGTGGTC 57.076 43.478 0.00 0.00 0.00 4.02
103 104 6.468543 GTTTCCTCTGATTCTCTAAAGTGGT 58.531 40.000 0.00 0.00 0.00 4.16
104 105 5.578727 CGTTTCCTCTGATTCTCTAAAGTGG 59.421 44.000 0.00 0.00 0.00 4.00
105 106 5.578727 CCGTTTCCTCTGATTCTCTAAAGTG 59.421 44.000 0.00 0.00 0.00 3.16
106 107 5.337652 CCCGTTTCCTCTGATTCTCTAAAGT 60.338 44.000 0.00 0.00 0.00 2.66
107 108 5.112686 CCCGTTTCCTCTGATTCTCTAAAG 58.887 45.833 0.00 0.00 0.00 1.85
108 109 4.081087 CCCCGTTTCCTCTGATTCTCTAAA 60.081 45.833 0.00 0.00 0.00 1.85
109 110 3.451178 CCCCGTTTCCTCTGATTCTCTAA 59.549 47.826 0.00 0.00 0.00 2.10
110 111 3.031736 CCCCGTTTCCTCTGATTCTCTA 58.968 50.000 0.00 0.00 0.00 2.43
111 112 1.834263 CCCCGTTTCCTCTGATTCTCT 59.166 52.381 0.00 0.00 0.00 3.10
112 113 1.831736 TCCCCGTTTCCTCTGATTCTC 59.168 52.381 0.00 0.00 0.00 2.87
113 114 1.834263 CTCCCCGTTTCCTCTGATTCT 59.166 52.381 0.00 0.00 0.00 2.40
114 115 1.831736 TCTCCCCGTTTCCTCTGATTC 59.168 52.381 0.00 0.00 0.00 2.52
115 116 1.834263 CTCTCCCCGTTTCCTCTGATT 59.166 52.381 0.00 0.00 0.00 2.57
116 117 1.007238 TCTCTCCCCGTTTCCTCTGAT 59.993 52.381 0.00 0.00 0.00 2.90
117 118 0.408309 TCTCTCCCCGTTTCCTCTGA 59.592 55.000 0.00 0.00 0.00 3.27
118 119 1.267121 TTCTCTCCCCGTTTCCTCTG 58.733 55.000 0.00 0.00 0.00 3.35
119 120 1.903183 CTTTCTCTCCCCGTTTCCTCT 59.097 52.381 0.00 0.00 0.00 3.69
120 121 1.900486 TCTTTCTCTCCCCGTTTCCTC 59.100 52.381 0.00 0.00 0.00 3.71
121 122 1.903183 CTCTTTCTCTCCCCGTTTCCT 59.097 52.381 0.00 0.00 0.00 3.36
122 123 1.900486 TCTCTTTCTCTCCCCGTTTCC 59.100 52.381 0.00 0.00 0.00 3.13
123 124 3.679824 TTCTCTTTCTCTCCCCGTTTC 57.320 47.619 0.00 0.00 0.00 2.78
124 125 5.735766 CTTATTCTCTTTCTCTCCCCGTTT 58.264 41.667 0.00 0.00 0.00 3.60
125 126 4.383226 GCTTATTCTCTTTCTCTCCCCGTT 60.383 45.833 0.00 0.00 0.00 4.44
126 127 3.133183 GCTTATTCTCTTTCTCTCCCCGT 59.867 47.826 0.00 0.00 0.00 5.28
127 128 3.133003 TGCTTATTCTCTTTCTCTCCCCG 59.867 47.826 0.00 0.00 0.00 5.73
128 129 4.762289 TGCTTATTCTCTTTCTCTCCCC 57.238 45.455 0.00 0.00 0.00 4.81
129 130 6.825721 TGAATTGCTTATTCTCTTTCTCTCCC 59.174 38.462 11.62 0.00 42.63 4.30
130 131 7.856145 TGAATTGCTTATTCTCTTTCTCTCC 57.144 36.000 11.62 0.00 42.63 3.71
131 132 8.945057 ACTTGAATTGCTTATTCTCTTTCTCTC 58.055 33.333 11.62 0.00 42.63 3.20
132 133 8.728833 CACTTGAATTGCTTATTCTCTTTCTCT 58.271 33.333 11.62 0.00 42.63 3.10
133 134 7.484324 GCACTTGAATTGCTTATTCTCTTTCTC 59.516 37.037 0.00 0.00 42.63 2.87
134 135 7.040201 TGCACTTGAATTGCTTATTCTCTTTCT 60.040 33.333 8.94 0.00 42.63 2.52
135 136 7.086376 TGCACTTGAATTGCTTATTCTCTTTC 58.914 34.615 8.94 0.00 42.63 2.62
136 137 6.985117 TGCACTTGAATTGCTTATTCTCTTT 58.015 32.000 8.94 0.00 42.63 2.52
137 138 6.579666 TGCACTTGAATTGCTTATTCTCTT 57.420 33.333 8.94 0.00 42.63 2.85
138 139 6.770746 ATGCACTTGAATTGCTTATTCTCT 57.229 33.333 8.94 0.00 42.63 3.10
139 140 7.923888 TCTATGCACTTGAATTGCTTATTCTC 58.076 34.615 8.94 0.00 42.63 2.87
140 141 7.870509 TCTATGCACTTGAATTGCTTATTCT 57.129 32.000 8.94 0.00 42.63 2.40
141 142 7.594015 CCATCTATGCACTTGAATTGCTTATTC 59.406 37.037 8.94 5.50 42.52 1.75
142 143 7.286087 TCCATCTATGCACTTGAATTGCTTATT 59.714 33.333 8.94 0.00 40.86 1.40
143 144 6.774170 TCCATCTATGCACTTGAATTGCTTAT 59.226 34.615 8.94 0.00 40.86 1.73
144 145 6.121590 TCCATCTATGCACTTGAATTGCTTA 58.878 36.000 8.94 6.10 40.86 3.09
145 146 4.951715 TCCATCTATGCACTTGAATTGCTT 59.048 37.500 8.94 5.25 40.86 3.91
146 147 4.529897 TCCATCTATGCACTTGAATTGCT 58.470 39.130 8.94 0.00 40.86 3.91
147 148 4.906065 TCCATCTATGCACTTGAATTGC 57.094 40.909 0.09 0.09 40.63 3.56
148 149 6.688637 TCTTCCATCTATGCACTTGAATTG 57.311 37.500 0.00 0.00 0.00 2.32
149 150 6.888632 ACTTCTTCCATCTATGCACTTGAATT 59.111 34.615 0.00 0.00 0.00 2.17
150 151 6.318144 CACTTCTTCCATCTATGCACTTGAAT 59.682 38.462 0.00 0.00 0.00 2.57
151 152 5.645067 CACTTCTTCCATCTATGCACTTGAA 59.355 40.000 0.00 0.00 0.00 2.69
152 153 5.046376 TCACTTCTTCCATCTATGCACTTGA 60.046 40.000 0.00 0.00 0.00 3.02
153 154 5.181009 TCACTTCTTCCATCTATGCACTTG 58.819 41.667 0.00 0.00 0.00 3.16
154 155 5.426689 TCACTTCTTCCATCTATGCACTT 57.573 39.130 0.00 0.00 0.00 3.16
155 156 5.366460 CATCACTTCTTCCATCTATGCACT 58.634 41.667 0.00 0.00 0.00 4.40
156 157 4.514441 CCATCACTTCTTCCATCTATGCAC 59.486 45.833 0.00 0.00 0.00 4.57
157 158 4.711399 CCATCACTTCTTCCATCTATGCA 58.289 43.478 0.00 0.00 0.00 3.96
158 159 3.501445 GCCATCACTTCTTCCATCTATGC 59.499 47.826 0.00 0.00 0.00 3.14
159 160 4.711399 TGCCATCACTTCTTCCATCTATG 58.289 43.478 0.00 0.00 0.00 2.23
160 161 5.128919 GTTGCCATCACTTCTTCCATCTAT 58.871 41.667 0.00 0.00 0.00 1.98
161 162 4.517285 GTTGCCATCACTTCTTCCATCTA 58.483 43.478 0.00 0.00 0.00 1.98
162 163 3.350833 GTTGCCATCACTTCTTCCATCT 58.649 45.455 0.00 0.00 0.00 2.90
163 164 2.096496 CGTTGCCATCACTTCTTCCATC 59.904 50.000 0.00 0.00 0.00 3.51
164 165 2.086869 CGTTGCCATCACTTCTTCCAT 58.913 47.619 0.00 0.00 0.00 3.41
165 166 1.522668 CGTTGCCATCACTTCTTCCA 58.477 50.000 0.00 0.00 0.00 3.53
166 167 0.804989 CCGTTGCCATCACTTCTTCC 59.195 55.000 0.00 0.00 0.00 3.46
167 168 0.804989 CCCGTTGCCATCACTTCTTC 59.195 55.000 0.00 0.00 0.00 2.87
168 169 0.400213 TCCCGTTGCCATCACTTCTT 59.600 50.000 0.00 0.00 0.00 2.52
169 170 0.036010 CTCCCGTTGCCATCACTTCT 60.036 55.000 0.00 0.00 0.00 2.85
170 171 0.321653 ACTCCCGTTGCCATCACTTC 60.322 55.000 0.00 0.00 0.00 3.01
171 172 0.606401 CACTCCCGTTGCCATCACTT 60.606 55.000 0.00 0.00 0.00 3.16
172 173 1.003355 CACTCCCGTTGCCATCACT 60.003 57.895 0.00 0.00 0.00 3.41
173 174 1.003839 TCACTCCCGTTGCCATCAC 60.004 57.895 0.00 0.00 0.00 3.06
174 175 1.191489 TCTCACTCCCGTTGCCATCA 61.191 55.000 0.00 0.00 0.00 3.07
175 176 0.460987 CTCTCACTCCCGTTGCCATC 60.461 60.000 0.00 0.00 0.00 3.51
176 177 1.599047 CTCTCACTCCCGTTGCCAT 59.401 57.895 0.00 0.00 0.00 4.40
177 178 3.059982 CTCTCACTCCCGTTGCCA 58.940 61.111 0.00 0.00 0.00 4.92
178 179 2.435059 GCTCTCACTCCCGTTGCC 60.435 66.667 0.00 0.00 0.00 4.52
179 180 2.811317 CGCTCTCACTCCCGTTGC 60.811 66.667 0.00 0.00 0.00 4.17
180 181 1.444553 GTCGCTCTCACTCCCGTTG 60.445 63.158 0.00 0.00 0.00 4.10
181 182 1.461091 TTGTCGCTCTCACTCCCGTT 61.461 55.000 0.00 0.00 0.00 4.44
182 183 1.461091 TTTGTCGCTCTCACTCCCGT 61.461 55.000 0.00 0.00 0.00 5.28
183 184 0.734253 CTTTGTCGCTCTCACTCCCG 60.734 60.000 0.00 0.00 0.00 5.14
184 185 0.390472 CCTTTGTCGCTCTCACTCCC 60.390 60.000 0.00 0.00 0.00 4.30
185 186 0.603569 TCCTTTGTCGCTCTCACTCC 59.396 55.000 0.00 0.00 0.00 3.85
186 187 2.029828 TCTTCCTTTGTCGCTCTCACTC 60.030 50.000 0.00 0.00 0.00 3.51
187 188 1.964223 TCTTCCTTTGTCGCTCTCACT 59.036 47.619 0.00 0.00 0.00 3.41
188 189 2.440539 TCTTCCTTTGTCGCTCTCAC 57.559 50.000 0.00 0.00 0.00 3.51
189 190 2.365617 ACTTCTTCCTTTGTCGCTCTCA 59.634 45.455 0.00 0.00 0.00 3.27
190 191 2.734079 CACTTCTTCCTTTGTCGCTCTC 59.266 50.000 0.00 0.00 0.00 3.20
191 192 2.760374 CACTTCTTCCTTTGTCGCTCT 58.240 47.619 0.00 0.00 0.00 4.09
192 193 1.195674 GCACTTCTTCCTTTGTCGCTC 59.804 52.381 0.00 0.00 0.00 5.03
193 194 1.230324 GCACTTCTTCCTTTGTCGCT 58.770 50.000 0.00 0.00 0.00 4.93
194 195 0.944386 TGCACTTCTTCCTTTGTCGC 59.056 50.000 0.00 0.00 0.00 5.19
195 196 2.159787 CGATGCACTTCTTCCTTTGTCG 60.160 50.000 0.00 0.00 0.00 4.35
196 197 3.067106 TCGATGCACTTCTTCCTTTGTC 58.933 45.455 0.00 0.00 0.00 3.18
197 198 3.126001 TCGATGCACTTCTTCCTTTGT 57.874 42.857 0.00 0.00 0.00 2.83
198 199 3.242220 CGATCGATGCACTTCTTCCTTTG 60.242 47.826 10.26 0.00 0.00 2.77
199 200 2.932614 CGATCGATGCACTTCTTCCTTT 59.067 45.455 10.26 0.00 0.00 3.11
200 201 2.544685 CGATCGATGCACTTCTTCCTT 58.455 47.619 10.26 0.00 0.00 3.36
201 202 1.804372 GCGATCGATGCACTTCTTCCT 60.804 52.381 21.57 0.00 0.00 3.36
202 203 0.579156 GCGATCGATGCACTTCTTCC 59.421 55.000 21.57 0.00 0.00 3.46
203 204 1.280982 TGCGATCGATGCACTTCTTC 58.719 50.000 21.57 0.00 37.44 2.87
204 205 3.441244 TGCGATCGATGCACTTCTT 57.559 47.368 21.57 0.00 37.44 2.52
210 211 0.951558 TAGCTAGTGCGATCGATGCA 59.048 50.000 21.57 15.52 45.42 3.96
211 212 1.332178 GTAGCTAGTGCGATCGATGC 58.668 55.000 21.57 13.86 45.42 3.91
212 213 1.596703 CGTAGCTAGTGCGATCGATG 58.403 55.000 21.57 4.16 45.42 3.84
234 235 3.947196 GTGTTCATATGATTGGTCTGCCA 59.053 43.478 6.17 0.00 44.38 4.92
235 236 3.947196 TGTGTTCATATGATTGGTCTGCC 59.053 43.478 6.17 0.00 0.00 4.85
236 237 5.565592 TTGTGTTCATATGATTGGTCTGC 57.434 39.130 6.17 0.00 0.00 4.26
237 238 7.031372 CCTTTTGTGTTCATATGATTGGTCTG 58.969 38.462 6.17 0.00 0.00 3.51
238 239 6.721208 ACCTTTTGTGTTCATATGATTGGTCT 59.279 34.615 6.17 0.00 0.00 3.85
239 240 6.924111 ACCTTTTGTGTTCATATGATTGGTC 58.076 36.000 6.17 0.00 0.00 4.02
240 241 6.916360 ACCTTTTGTGTTCATATGATTGGT 57.084 33.333 6.17 3.94 0.00 3.67
241 242 7.377398 TCAACCTTTTGTGTTCATATGATTGG 58.623 34.615 6.17 3.38 34.02 3.16
242 243 8.084073 ACTCAACCTTTTGTGTTCATATGATTG 58.916 33.333 6.17 4.33 36.28 2.67
243 244 8.181904 ACTCAACCTTTTGTGTTCATATGATT 57.818 30.769 6.17 0.00 36.28 2.57
244 245 7.765695 ACTCAACCTTTTGTGTTCATATGAT 57.234 32.000 6.17 0.00 36.28 2.45
245 246 7.284261 TCAACTCAACCTTTTGTGTTCATATGA 59.716 33.333 0.00 0.00 44.02 2.15
246 247 7.379529 GTCAACTCAACCTTTTGTGTTCATATG 59.620 37.037 0.00 0.00 44.02 1.78
247 248 7.068103 TGTCAACTCAACCTTTTGTGTTCATAT 59.932 33.333 2.66 0.00 44.02 1.78
248 249 6.375736 TGTCAACTCAACCTTTTGTGTTCATA 59.624 34.615 2.66 0.00 44.02 2.15
249 250 5.184864 TGTCAACTCAACCTTTTGTGTTCAT 59.815 36.000 2.66 0.00 44.02 2.57
250 251 4.520874 TGTCAACTCAACCTTTTGTGTTCA 59.479 37.500 2.66 0.00 44.02 3.18
251 252 5.054390 TGTCAACTCAACCTTTTGTGTTC 57.946 39.130 2.66 0.00 44.02 3.18
252 253 4.082245 CCTGTCAACTCAACCTTTTGTGTT 60.082 41.667 0.23 0.23 45.80 3.32
253 254 3.443681 CCTGTCAACTCAACCTTTTGTGT 59.556 43.478 0.00 0.00 40.39 3.72
254 255 3.694072 TCCTGTCAACTCAACCTTTTGTG 59.306 43.478 0.00 0.00 34.02 3.33
255 256 3.694566 GTCCTGTCAACTCAACCTTTTGT 59.305 43.478 0.00 0.00 34.02 2.83
256 257 3.242739 CGTCCTGTCAACTCAACCTTTTG 60.243 47.826 0.00 0.00 0.00 2.44
257 258 2.943033 CGTCCTGTCAACTCAACCTTTT 59.057 45.455 0.00 0.00 0.00 2.27
258 259 2.169769 TCGTCCTGTCAACTCAACCTTT 59.830 45.455 0.00 0.00 0.00 3.11
259 260 1.760613 TCGTCCTGTCAACTCAACCTT 59.239 47.619 0.00 0.00 0.00 3.50
260 261 1.410004 TCGTCCTGTCAACTCAACCT 58.590 50.000 0.00 0.00 0.00 3.50
261 262 1.865340 GTTCGTCCTGTCAACTCAACC 59.135 52.381 0.00 0.00 0.00 3.77
262 263 2.546778 TGTTCGTCCTGTCAACTCAAC 58.453 47.619 0.00 0.00 0.00 3.18
263 264 2.971660 TGTTCGTCCTGTCAACTCAA 57.028 45.000 0.00 0.00 0.00 3.02
264 265 2.971660 TTGTTCGTCCTGTCAACTCA 57.028 45.000 0.00 0.00 0.00 3.41
265 266 2.737252 GGATTGTTCGTCCTGTCAACTC 59.263 50.000 0.00 0.00 32.85 3.01
266 267 2.767505 GGATTGTTCGTCCTGTCAACT 58.232 47.619 0.00 0.00 32.85 3.16
267 268 1.459592 CGGATTGTTCGTCCTGTCAAC 59.540 52.381 0.00 0.00 33.46 3.18
268 269 1.341852 TCGGATTGTTCGTCCTGTCAA 59.658 47.619 0.00 0.00 33.46 3.18
269 270 0.963225 TCGGATTGTTCGTCCTGTCA 59.037 50.000 0.00 0.00 33.46 3.58
270 271 2.194271 GATCGGATTGTTCGTCCTGTC 58.806 52.381 0.00 0.00 33.46 3.51
271 272 1.469251 CGATCGGATTGTTCGTCCTGT 60.469 52.381 7.38 0.00 35.55 4.00
272 273 1.200483 CGATCGGATTGTTCGTCCTG 58.800 55.000 7.38 0.00 35.55 3.86
273 274 1.100510 TCGATCGGATTGTTCGTCCT 58.899 50.000 16.41 0.00 40.03 3.85
274 275 2.052157 GATCGATCGGATTGTTCGTCC 58.948 52.381 16.41 0.00 40.03 4.79
275 276 2.727777 TGATCGATCGGATTGTTCGTC 58.272 47.619 20.03 0.00 40.03 4.20
276 277 2.863401 TGATCGATCGGATTGTTCGT 57.137 45.000 20.03 0.00 40.03 3.85
277 278 3.060940 CACTTGATCGATCGGATTGTTCG 60.061 47.826 20.03 0.00 40.37 3.95
278 279 4.112634 TCACTTGATCGATCGGATTGTTC 58.887 43.478 20.03 7.14 34.82 3.18
279 280 4.123497 TCACTTGATCGATCGGATTGTT 57.877 40.909 20.03 0.00 34.82 2.83
280 281 3.801114 TCACTTGATCGATCGGATTGT 57.199 42.857 20.03 10.89 34.82 2.71
281 282 6.253083 CAGATATCACTTGATCGATCGGATTG 59.747 42.308 20.03 14.62 34.82 2.67
282 283 6.328714 CAGATATCACTTGATCGATCGGATT 58.671 40.000 20.03 10.56 34.82 3.01
283 284 5.163571 CCAGATATCACTTGATCGATCGGAT 60.164 44.000 20.03 19.39 38.35 4.18
284 285 4.156739 CCAGATATCACTTGATCGATCGGA 59.843 45.833 20.03 14.47 36.05 4.55
285 286 4.419280 CCAGATATCACTTGATCGATCGG 58.581 47.826 20.03 16.72 36.05 4.18
286 287 3.856521 GCCAGATATCACTTGATCGATCG 59.143 47.826 20.03 9.36 36.05 3.69
287 288 4.180057 GGCCAGATATCACTTGATCGATC 58.820 47.826 18.72 18.72 36.05 3.69
288 289 3.580022 TGGCCAGATATCACTTGATCGAT 59.420 43.478 0.00 0.00 36.05 3.59
289 290 2.965147 TGGCCAGATATCACTTGATCGA 59.035 45.455 0.00 0.00 36.05 3.59
290 291 3.006217 TCTGGCCAGATATCACTTGATCG 59.994 47.826 32.00 0.66 32.67 3.69
291 292 4.202295 TGTCTGGCCAGATATCACTTGATC 60.202 45.833 37.07 19.87 39.97 2.92
292 293 3.713248 TGTCTGGCCAGATATCACTTGAT 59.287 43.478 37.07 0.00 39.97 2.57
293 294 3.106827 TGTCTGGCCAGATATCACTTGA 58.893 45.455 37.07 9.44 39.97 3.02
294 295 3.548745 TGTCTGGCCAGATATCACTTG 57.451 47.619 37.07 6.86 39.97 3.16
295 296 3.521126 AGTTGTCTGGCCAGATATCACTT 59.479 43.478 37.07 17.61 39.97 3.16
296 297 3.110705 AGTTGTCTGGCCAGATATCACT 58.889 45.455 37.07 29.53 39.97 3.41
297 298 3.118629 TGAGTTGTCTGGCCAGATATCAC 60.119 47.826 37.07 27.93 39.97 3.06
298 299 3.106827 TGAGTTGTCTGGCCAGATATCA 58.893 45.455 37.07 29.69 39.97 2.15
299 300 3.827008 TGAGTTGTCTGGCCAGATATC 57.173 47.619 37.07 30.46 39.97 1.63
300 301 3.457380 ACATGAGTTGTCTGGCCAGATAT 59.543 43.478 37.07 21.28 39.97 1.63
301 302 2.840038 ACATGAGTTGTCTGGCCAGATA 59.160 45.455 37.07 31.91 39.97 1.98
302 303 1.632409 ACATGAGTTGTCTGGCCAGAT 59.368 47.619 37.07 22.36 39.97 2.90
303 304 1.059098 ACATGAGTTGTCTGGCCAGA 58.941 50.000 32.00 32.00 30.89 3.86
304 305 2.768253 TACATGAGTTGTCTGGCCAG 57.232 50.000 27.87 27.87 39.87 4.85
305 306 3.181445 ACTTTACATGAGTTGTCTGGCCA 60.181 43.478 4.71 4.71 39.87 5.36
306 307 3.412386 ACTTTACATGAGTTGTCTGGCC 58.588 45.455 0.00 0.00 39.87 5.36
307 308 5.215160 CAAACTTTACATGAGTTGTCTGGC 58.785 41.667 0.00 0.00 39.87 4.85
308 309 5.009010 AGCAAACTTTACATGAGTTGTCTGG 59.991 40.000 0.00 0.00 39.87 3.86
309 310 5.911280 CAGCAAACTTTACATGAGTTGTCTG 59.089 40.000 0.00 6.45 39.87 3.51
310 311 5.822519 TCAGCAAACTTTACATGAGTTGTCT 59.177 36.000 0.00 0.00 39.87 3.41
311 312 6.017934 TCTCAGCAAACTTTACATGAGTTGTC 60.018 38.462 0.00 0.00 39.87 3.18
312 313 5.822519 TCTCAGCAAACTTTACATGAGTTGT 59.177 36.000 0.00 0.00 42.62 3.32
313 314 6.304356 TCTCAGCAAACTTTACATGAGTTG 57.696 37.500 0.00 0.00 37.41 3.16
314 315 6.942532 TTCTCAGCAAACTTTACATGAGTT 57.057 33.333 0.00 0.00 38.92 3.01
315 316 6.942532 TTTCTCAGCAAACTTTACATGAGT 57.057 33.333 0.00 0.00 36.43 3.41
316 317 8.807667 ATTTTTCTCAGCAAACTTTACATGAG 57.192 30.769 0.00 0.00 36.38 2.90
319 320 9.696917 CCTTATTTTTCTCAGCAAACTTTACAT 57.303 29.630 0.00 0.00 0.00 2.29
320 321 8.908903 TCCTTATTTTTCTCAGCAAACTTTACA 58.091 29.630 0.00 0.00 0.00 2.41
321 322 9.744468 TTCCTTATTTTTCTCAGCAAACTTTAC 57.256 29.630 0.00 0.00 0.00 2.01
323 324 9.665719 TTTTCCTTATTTTTCTCAGCAAACTTT 57.334 25.926 0.00 0.00 0.00 2.66
324 325 9.665719 TTTTTCCTTATTTTTCTCAGCAAACTT 57.334 25.926 0.00 0.00 0.00 2.66
347 348 6.402550 CGTGTAGCTCTGCATCAGTTATTTTT 60.403 38.462 0.00 0.00 32.61 1.94
348 349 5.063944 CGTGTAGCTCTGCATCAGTTATTTT 59.936 40.000 0.00 0.00 32.61 1.82
349 350 4.568359 CGTGTAGCTCTGCATCAGTTATTT 59.432 41.667 0.00 0.00 32.61 1.40
350 351 4.115516 CGTGTAGCTCTGCATCAGTTATT 58.884 43.478 0.00 0.00 32.61 1.40
351 352 3.711086 CGTGTAGCTCTGCATCAGTTAT 58.289 45.455 0.00 0.00 32.61 1.89
352 353 2.735444 GCGTGTAGCTCTGCATCAGTTA 60.735 50.000 0.00 0.00 44.04 2.24
353 354 2.001812 CGTGTAGCTCTGCATCAGTT 57.998 50.000 0.00 0.00 32.61 3.16
354 355 0.459237 GCGTGTAGCTCTGCATCAGT 60.459 55.000 0.00 0.00 44.04 3.41
355 356 1.477826 CGCGTGTAGCTCTGCATCAG 61.478 60.000 0.00 0.00 45.59 2.90
356 357 1.517039 CGCGTGTAGCTCTGCATCA 60.517 57.895 0.00 0.00 45.59 3.07
357 358 1.226688 TCGCGTGTAGCTCTGCATC 60.227 57.895 5.77 0.00 45.59 3.91
358 359 1.517257 GTCGCGTGTAGCTCTGCAT 60.517 57.895 5.77 0.00 45.59 3.96
359 360 2.126463 GTCGCGTGTAGCTCTGCA 60.126 61.111 5.77 0.00 45.59 4.41
360 361 1.009389 AAAGTCGCGTGTAGCTCTGC 61.009 55.000 5.77 0.00 45.59 4.26
361 362 1.419374 AAAAGTCGCGTGTAGCTCTG 58.581 50.000 5.77 0.00 45.59 3.35
362 363 2.150397 AAAAAGTCGCGTGTAGCTCT 57.850 45.000 5.77 0.00 45.59 4.09
380 381 3.110447 GCAGTGGCAATTCCTGAAAAA 57.890 42.857 6.99 0.00 40.72 1.94
381 382 2.818130 GCAGTGGCAATTCCTGAAAA 57.182 45.000 6.99 0.00 40.72 2.29
399 400 6.154445 ATAAGTATTAAAGCTGCATGCATGC 58.846 36.000 38.71 38.71 43.85 4.06
400 401 7.650504 ACAATAAGTATTAAAGCTGCATGCATG 59.349 33.333 22.97 22.70 38.03 4.06
401 402 7.719483 ACAATAAGTATTAAAGCTGCATGCAT 58.281 30.769 22.97 9.00 38.03 3.96
402 403 7.099266 ACAATAAGTATTAAAGCTGCATGCA 57.901 32.000 21.29 21.29 38.03 3.96
403 404 9.683069 ATTACAATAAGTATTAAAGCTGCATGC 57.317 29.630 11.82 11.82 36.48 4.06
436 437 9.962809 TCATGCAGATATATGAAATGGTCAATA 57.037 29.630 0.39 0.00 40.50 1.90
437 438 8.873186 TCATGCAGATATATGAAATGGTCAAT 57.127 30.769 0.39 0.00 40.50 2.57
438 439 7.940688 ACTCATGCAGATATATGAAATGGTCAA 59.059 33.333 0.39 0.00 40.50 3.18
439 440 7.389607 CACTCATGCAGATATATGAAATGGTCA 59.610 37.037 0.39 0.00 41.67 4.02
440 441 7.749808 CACTCATGCAGATATATGAAATGGTC 58.250 38.462 0.39 0.00 0.00 4.02
441 442 7.683437 CACTCATGCAGATATATGAAATGGT 57.317 36.000 0.39 2.67 0.00 3.55
458 459 1.976132 ATCCCCGACCTGCACTCATG 61.976 60.000 0.00 0.00 0.00 3.07
459 460 1.690633 ATCCCCGACCTGCACTCAT 60.691 57.895 0.00 0.00 0.00 2.90
460 461 2.284625 ATCCCCGACCTGCACTCA 60.285 61.111 0.00 0.00 0.00 3.41
461 462 1.899437 TTCATCCCCGACCTGCACTC 61.899 60.000 0.00 0.00 0.00 3.51
462 463 1.903877 CTTCATCCCCGACCTGCACT 61.904 60.000 0.00 0.00 0.00 4.40
463 464 1.450312 CTTCATCCCCGACCTGCAC 60.450 63.158 0.00 0.00 0.00 4.57
464 465 1.198094 TTCTTCATCCCCGACCTGCA 61.198 55.000 0.00 0.00 0.00 4.41
465 466 0.181350 ATTCTTCATCCCCGACCTGC 59.819 55.000 0.00 0.00 0.00 4.85
466 467 1.486310 TCATTCTTCATCCCCGACCTG 59.514 52.381 0.00 0.00 0.00 4.00
467 468 1.879575 TCATTCTTCATCCCCGACCT 58.120 50.000 0.00 0.00 0.00 3.85
468 469 2.170607 TCTTCATTCTTCATCCCCGACC 59.829 50.000 0.00 0.00 0.00 4.79
469 470 3.118592 AGTCTTCATTCTTCATCCCCGAC 60.119 47.826 0.00 0.00 0.00 4.79
470 471 3.107601 AGTCTTCATTCTTCATCCCCGA 58.892 45.455 0.00 0.00 0.00 5.14
471 472 3.550437 AGTCTTCATTCTTCATCCCCG 57.450 47.619 0.00 0.00 0.00 5.73
472 473 6.937465 GGTTATAGTCTTCATTCTTCATCCCC 59.063 42.308 0.00 0.00 0.00 4.81
473 474 7.442666 GTGGTTATAGTCTTCATTCTTCATCCC 59.557 40.741 0.00 0.00 0.00 3.85
474 475 7.987458 TGTGGTTATAGTCTTCATTCTTCATCC 59.013 37.037 0.00 0.00 0.00 3.51
475 476 8.948631 TGTGGTTATAGTCTTCATTCTTCATC 57.051 34.615 0.00 0.00 0.00 2.92
476 477 9.334947 CATGTGGTTATAGTCTTCATTCTTCAT 57.665 33.333 0.00 0.00 0.00 2.57
477 478 7.280876 GCATGTGGTTATAGTCTTCATTCTTCA 59.719 37.037 0.00 0.00 0.00 3.02
478 479 7.254932 GGCATGTGGTTATAGTCTTCATTCTTC 60.255 40.741 0.00 0.00 0.00 2.87
479 480 6.543831 GGCATGTGGTTATAGTCTTCATTCTT 59.456 38.462 0.00 0.00 0.00 2.52
480 481 6.058183 GGCATGTGGTTATAGTCTTCATTCT 58.942 40.000 0.00 0.00 0.00 2.40
481 482 5.822519 TGGCATGTGGTTATAGTCTTCATTC 59.177 40.000 0.00 0.00 0.00 2.67
482 483 5.754782 TGGCATGTGGTTATAGTCTTCATT 58.245 37.500 0.00 0.00 0.00 2.57
483 484 5.372343 TGGCATGTGGTTATAGTCTTCAT 57.628 39.130 0.00 0.00 0.00 2.57
484 485 4.835284 TGGCATGTGGTTATAGTCTTCA 57.165 40.909 0.00 0.00 0.00 3.02
485 486 5.126067 ACATGGCATGTGGTTATAGTCTTC 58.874 41.667 30.96 0.00 43.01 2.87
486 487 5.116084 ACATGGCATGTGGTTATAGTCTT 57.884 39.130 30.96 2.35 43.01 3.01
487 488 4.778213 ACATGGCATGTGGTTATAGTCT 57.222 40.909 30.96 2.56 43.01 3.24
504 505 3.531934 TGAGATAGCTGACCACACATG 57.468 47.619 0.00 0.00 0.00 3.21
505 506 3.517100 ACTTGAGATAGCTGACCACACAT 59.483 43.478 0.00 0.00 0.00 3.21
506 507 2.899900 ACTTGAGATAGCTGACCACACA 59.100 45.455 0.00 0.00 0.00 3.72
507 508 3.601443 ACTTGAGATAGCTGACCACAC 57.399 47.619 0.00 0.00 0.00 3.82
508 509 5.246203 ACTTAACTTGAGATAGCTGACCACA 59.754 40.000 0.00 0.00 0.00 4.17
509 510 5.725362 ACTTAACTTGAGATAGCTGACCAC 58.275 41.667 0.00 0.00 0.00 4.16
510 511 6.360370 AACTTAACTTGAGATAGCTGACCA 57.640 37.500 0.00 0.00 0.00 4.02
511 512 7.489757 CAGTAACTTAACTTGAGATAGCTGACC 59.510 40.741 0.00 0.00 0.00 4.02
512 513 8.244802 TCAGTAACTTAACTTGAGATAGCTGAC 58.755 37.037 0.00 0.00 0.00 3.51
513 514 8.349568 TCAGTAACTTAACTTGAGATAGCTGA 57.650 34.615 0.00 0.00 0.00 4.26
514 515 9.029243 CATCAGTAACTTAACTTGAGATAGCTG 57.971 37.037 0.00 0.00 0.00 4.24
515 516 8.972127 TCATCAGTAACTTAACTTGAGATAGCT 58.028 33.333 0.00 0.00 0.00 3.32
516 517 9.243637 CTCATCAGTAACTTAACTTGAGATAGC 57.756 37.037 0.00 0.00 36.85 2.97
529 530 9.725019 TTCACATCAAATACTCATCAGTAACTT 57.275 29.630 0.00 0.00 38.66 2.66
530 531 9.725019 TTTCACATCAAATACTCATCAGTAACT 57.275 29.630 0.00 0.00 38.66 2.24
531 532 9.979270 CTTTCACATCAAATACTCATCAGTAAC 57.021 33.333 0.00 0.00 38.66 2.50
532 533 9.942850 TCTTTCACATCAAATACTCATCAGTAA 57.057 29.630 0.00 0.00 38.66 2.24
533 534 9.942850 TTCTTTCACATCAAATACTCATCAGTA 57.057 29.630 0.00 0.00 39.54 2.74
534 535 8.853077 TTCTTTCACATCAAATACTCATCAGT 57.147 30.769 0.00 0.00 36.55 3.41
535 536 9.159364 TCTTCTTTCACATCAAATACTCATCAG 57.841 33.333 0.00 0.00 0.00 2.90
536 537 9.506018 TTCTTCTTTCACATCAAATACTCATCA 57.494 29.630 0.00 0.00 0.00 3.07
537 538 9.985318 CTTCTTCTTTCACATCAAATACTCATC 57.015 33.333 0.00 0.00 0.00 2.92
538 539 8.954350 CCTTCTTCTTTCACATCAAATACTCAT 58.046 33.333 0.00 0.00 0.00 2.90
539 540 8.156820 TCCTTCTTCTTTCACATCAAATACTCA 58.843 33.333 0.00 0.00 0.00 3.41
540 541 8.553459 TCCTTCTTCTTTCACATCAAATACTC 57.447 34.615 0.00 0.00 0.00 2.59
541 542 7.609532 CCTCCTTCTTCTTTCACATCAAATACT 59.390 37.037 0.00 0.00 0.00 2.12
542 543 7.607991 TCCTCCTTCTTCTTTCACATCAAATAC 59.392 37.037 0.00 0.00 0.00 1.89
543 544 7.689299 TCCTCCTTCTTCTTTCACATCAAATA 58.311 34.615 0.00 0.00 0.00 1.40
544 545 6.546484 TCCTCCTTCTTCTTTCACATCAAAT 58.454 36.000 0.00 0.00 0.00 2.32
545 546 5.940617 TCCTCCTTCTTCTTTCACATCAAA 58.059 37.500 0.00 0.00 0.00 2.69
546 547 5.567037 TCCTCCTTCTTCTTTCACATCAA 57.433 39.130 0.00 0.00 0.00 2.57
547 548 5.567037 TTCCTCCTTCTTCTTTCACATCA 57.433 39.130 0.00 0.00 0.00 3.07
548 549 6.712547 TCTTTTCCTCCTTCTTCTTTCACATC 59.287 38.462 0.00 0.00 0.00 3.06
549 550 6.605119 TCTTTTCCTCCTTCTTCTTTCACAT 58.395 36.000 0.00 0.00 0.00 3.21
550 551 6.001449 TCTTTTCCTCCTTCTTCTTTCACA 57.999 37.500 0.00 0.00 0.00 3.58
551 552 6.944234 TTCTTTTCCTCCTTCTTCTTTCAC 57.056 37.500 0.00 0.00 0.00 3.18
552 553 7.954666 TTTTCTTTTCCTCCTTCTTCTTTCA 57.045 32.000 0.00 0.00 0.00 2.69
553 554 8.687242 TCTTTTTCTTTTCCTCCTTCTTCTTTC 58.313 33.333 0.00 0.00 0.00 2.62
554 555 8.595362 TCTTTTTCTTTTCCTCCTTCTTCTTT 57.405 30.769 0.00 0.00 0.00 2.52
555 556 8.055790 TCTCTTTTTCTTTTCCTCCTTCTTCTT 58.944 33.333 0.00 0.00 0.00 2.52
556 557 7.578203 TCTCTTTTTCTTTTCCTCCTTCTTCT 58.422 34.615 0.00 0.00 0.00 2.85
557 558 7.809546 TCTCTTTTTCTTTTCCTCCTTCTTC 57.190 36.000 0.00 0.00 0.00 2.87
558 559 8.637099 CATTCTCTTTTTCTTTTCCTCCTTCTT 58.363 33.333 0.00 0.00 0.00 2.52
559 560 8.001292 TCATTCTCTTTTTCTTTTCCTCCTTCT 58.999 33.333 0.00 0.00 0.00 2.85
560 561 8.171164 TCATTCTCTTTTTCTTTTCCTCCTTC 57.829 34.615 0.00 0.00 0.00 3.46
561 562 8.539117 TTCATTCTCTTTTTCTTTTCCTCCTT 57.461 30.769 0.00 0.00 0.00 3.36
562 563 7.255766 GCTTCATTCTCTTTTTCTTTTCCTCCT 60.256 37.037 0.00 0.00 0.00 3.69
563 564 6.865726 GCTTCATTCTCTTTTTCTTTTCCTCC 59.134 38.462 0.00 0.00 0.00 4.30
564 565 6.865726 GGCTTCATTCTCTTTTTCTTTTCCTC 59.134 38.462 0.00 0.00 0.00 3.71
565 566 6.552725 AGGCTTCATTCTCTTTTTCTTTTCCT 59.447 34.615 0.00 0.00 0.00 3.36
566 567 6.753180 AGGCTTCATTCTCTTTTTCTTTTCC 58.247 36.000 0.00 0.00 0.00 3.13
574 575 9.593134 CGCTATATATAGGCTTCATTCTCTTTT 57.407 33.333 19.19 0.00 0.00 2.27
575 576 8.200792 CCGCTATATATAGGCTTCATTCTCTTT 58.799 37.037 19.19 0.00 0.00 2.52
576 577 7.201956 CCCGCTATATATAGGCTTCATTCTCTT 60.202 40.741 19.19 0.00 0.00 2.85
577 578 6.266558 CCCGCTATATATAGGCTTCATTCTCT 59.733 42.308 19.19 0.00 0.00 3.10
578 579 6.041069 ACCCGCTATATATAGGCTTCATTCTC 59.959 42.308 19.19 0.58 0.00 2.87
579 580 5.900123 ACCCGCTATATATAGGCTTCATTCT 59.100 40.000 19.19 0.00 0.00 2.40
580 581 5.986135 CACCCGCTATATATAGGCTTCATTC 59.014 44.000 19.19 1.81 0.00 2.67
581 582 5.661312 TCACCCGCTATATATAGGCTTCATT 59.339 40.000 19.19 0.00 0.00 2.57
582 583 5.208890 TCACCCGCTATATATAGGCTTCAT 58.791 41.667 19.19 0.00 0.00 2.57
583 584 4.606210 TCACCCGCTATATATAGGCTTCA 58.394 43.478 19.19 0.00 0.00 3.02
584 585 5.593679 TTCACCCGCTATATATAGGCTTC 57.406 43.478 19.19 3.99 0.00 3.86
585 586 6.239345 GCTATTCACCCGCTATATATAGGCTT 60.239 42.308 19.19 0.06 0.00 4.35
586 587 5.244178 GCTATTCACCCGCTATATATAGGCT 59.756 44.000 19.19 0.00 0.00 4.58
587 588 5.244178 AGCTATTCACCCGCTATATATAGGC 59.756 44.000 19.19 11.45 31.12 3.93
588 589 6.071840 GGAGCTATTCACCCGCTATATATAGG 60.072 46.154 19.19 8.14 33.47 2.57
589 590 6.071840 GGGAGCTATTCACCCGCTATATATAG 60.072 46.154 14.45 14.45 35.84 1.31
590 591 5.773680 GGGAGCTATTCACCCGCTATATATA 59.226 44.000 0.00 0.00 35.84 0.86
591 592 4.589374 GGGAGCTATTCACCCGCTATATAT 59.411 45.833 0.00 0.00 35.84 0.86
592 593 3.958798 GGGAGCTATTCACCCGCTATATA 59.041 47.826 0.00 0.00 35.84 0.86
593 594 2.766828 GGGAGCTATTCACCCGCTATAT 59.233 50.000 0.00 0.00 35.84 0.86
594 595 2.176889 GGGAGCTATTCACCCGCTATA 58.823 52.381 0.00 0.00 35.84 1.31
595 596 0.977395 GGGAGCTATTCACCCGCTAT 59.023 55.000 0.00 0.00 35.84 2.97
596 597 2.437625 GGGAGCTATTCACCCGCTA 58.562 57.895 0.00 0.00 35.84 4.26
597 598 3.231298 GGGAGCTATTCACCCGCT 58.769 61.111 0.00 0.00 35.84 5.52
717 718 4.406456 ACATGTGTCTTTGGATTAGGCAA 58.594 39.130 0.00 0.00 0.00 4.52
1028 1029 2.280389 CATAGCGCGGCCATGAGT 60.280 61.111 8.83 0.00 0.00 3.41
1328 1329 4.588951 TCCAGTTGAATCCGCTCTATGTAT 59.411 41.667 0.00 0.00 0.00 2.29
1715 1717 3.686726 GTGAAGAAGACATGCCGAATTCT 59.313 43.478 3.52 0.00 0.00 2.40
2089 2101 4.468153 AGAACCAACCTTTTGTTTTAGCCA 59.532 37.500 0.00 0.00 34.00 4.75
2349 2362 7.311992 CCCGATGCCCCTCTATCTATCTATATA 60.312 44.444 0.00 0.00 0.00 0.86
2466 2479 8.870116 TGTGTGCCTGTGTCTTATATATATCTT 58.130 33.333 0.00 0.00 0.00 2.40
2476 2489 1.474320 GGTGTGTGTGCCTGTGTCTTA 60.474 52.381 0.00 0.00 0.00 2.10
2484 2497 2.203153 GTTCGGGTGTGTGTGCCT 60.203 61.111 0.00 0.00 0.00 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.