Multiple sequence alignment - TraesCS4B01G395900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G395900 chr4B 100.000 5935 0 0 1 5935 670447819 670441885 0.000000e+00 10960.0
1 TraesCS4B01G395900 chrUn 90.604 2682 154 34 802 3437 29220346 29222975 0.000000e+00 3467.0
2 TraesCS4B01G395900 chrUn 90.326 1871 125 32 3568 5413 29222981 29224820 0.000000e+00 2401.0
3 TraesCS4B01G395900 chrUn 90.161 498 19 8 5451 5935 29225088 29225568 6.530000e-174 621.0
4 TraesCS4B01G395900 chrUn 82.903 310 19 9 1 302 29219889 29220172 1.280000e-61 248.0
5 TraesCS4B01G395900 chr5A 87.610 3059 236 55 480 3437 708447445 708444429 0.000000e+00 3417.0
6 TraesCS4B01G395900 chr5A 82.774 894 100 33 3816 4699 708444145 708443296 0.000000e+00 749.0
7 TraesCS4B01G395900 chr5A 86.174 311 26 8 1 302 708448173 708447871 2.670000e-83 320.0
8 TraesCS4B01G395900 chr5A 93.333 180 12 0 3564 3743 708444427 708444248 3.530000e-67 267.0
9 TraesCS4B01G395900 chr5A 79.769 173 11 8 309 480 708447638 708447489 2.930000e-18 104.0
10 TraesCS4B01G395900 chr2B 94.615 130 7 0 3437 3566 134488796 134488667 1.010000e-47 202.0
11 TraesCS4B01G395900 chr2A 93.846 130 8 0 3434 3563 389220651 389220780 4.690000e-46 196.0
12 TraesCS4B01G395900 chr3B 93.182 132 8 1 3433 3563 358664719 358664588 6.070000e-45 193.0
13 TraesCS4B01G395900 chr7B 93.701 127 8 0 3437 3563 401136814 401136688 2.180000e-44 191.0
14 TraesCS4B01G395900 chr4A 92.537 134 8 2 3434 3566 692357972 692357840 2.180000e-44 191.0
15 TraesCS4B01G395900 chr4D 91.852 135 11 0 3436 3570 364374133 364374267 7.850000e-44 189.0
16 TraesCS4B01G395900 chr3D 91.852 135 11 0 3436 3570 545361754 545361620 7.850000e-44 189.0
17 TraesCS4B01G395900 chr7D 89.796 147 13 2 3435 3580 194601660 194601805 2.820000e-43 187.0
18 TraesCS4B01G395900 chr6A 90.278 144 12 2 3423 3564 2798554 2798697 2.820000e-43 187.0
19 TraesCS4B01G395900 chr1D 95.745 47 2 0 1226 1272 251300331 251300377 6.380000e-10 76.8
20 TraesCS4B01G395900 chr1B 93.617 47 3 0 1226 1272 363163097 363163051 2.970000e-08 71.3
21 TraesCS4B01G395900 chr1A 91.489 47 4 0 1226 1272 321395266 321395312 1.380000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G395900 chr4B 670441885 670447819 5934 True 10960.00 10960 100.0000 1 5935 1 chr4B.!!$R1 5934
1 TraesCS4B01G395900 chrUn 29219889 29225568 5679 False 1684.25 3467 88.4985 1 5935 4 chrUn.!!$F1 5934
2 TraesCS4B01G395900 chr5A 708443296 708448173 4877 True 971.40 3417 85.9320 1 4699 5 chr5A.!!$R1 4698

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
558 871 0.106149 GAACACACGTTCCACCCTCT 59.894 55.000 0.00 0.0 44.92 3.69 F
677 995 0.255033 TCCTCTCCGGAATCGACTGA 59.745 55.000 5.23 0.0 39.40 3.41 F
678 996 0.382515 CCTCTCCGGAATCGACTGAC 59.617 60.000 5.23 0.0 39.00 3.51 F
2218 2627 0.320683 TGTGATCACCCGTTCTGCTG 60.321 55.000 22.85 0.0 0.00 4.41 F
2278 2687 1.080705 GGCAGCAGCAAAAGAGCAG 60.081 57.895 2.65 0.0 44.61 4.24 F
3454 3905 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.0 44.66 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1470 1857 0.035036 TAAATCCAACCACGGCGACA 59.965 50.0 16.62 0.0 0.00 4.35 R
1652 2050 0.108567 GTGCTCTCGGGGTCTTCTTC 60.109 60.0 0.00 0.0 0.00 2.87 R
2275 2684 0.110486 TTTCCCCTGACTGTTCCTGC 59.890 55.0 0.00 0.0 0.00 4.85 R
3437 3888 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.0 13.64 0.0 46.06 3.85 R
3545 3996 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.0 0.00 0.0 0.00 3.46 R
5419 5933 0.026674 CATACCTGATGTGTTGCGCG 59.973 55.0 0.00 0.0 0.00 6.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
134 167 7.629130 TTGAAGAACAAAAATGCATTAGTTGC 58.371 30.769 24.97 15.31 42.65 4.17
227 260 8.764558 TCACCTTATGCTTTCTTTGTACCTATA 58.235 33.333 0.00 0.00 0.00 1.31
238 271 8.833231 TTCTTTGTACCTATATGATGCTTAGC 57.167 34.615 0.00 0.00 0.00 3.09
283 320 2.667969 GCATTCGGAGTTTTGCATTTCC 59.332 45.455 0.00 0.00 35.22 3.13
302 339 7.612266 CATTTCCGAAACTTTGAACTTGAAAG 58.388 34.615 0.00 0.00 36.63 2.62
303 340 5.243426 TCCGAAACTTTGAACTTGAAAGG 57.757 39.130 5.81 0.00 35.15 3.11
304 341 3.796717 CCGAAACTTTGAACTTGAAAGGC 59.203 43.478 5.81 0.00 35.15 4.35
307 574 3.971032 ACTTTGAACTTGAAAGGCTCG 57.029 42.857 5.81 0.00 35.15 5.03
319 586 3.293702 GGCTCGAAGGCTCTCTGT 58.706 61.111 0.00 0.00 37.85 3.41
361 628 1.563924 TGCAGGACGTGTAACCCTAT 58.436 50.000 0.00 0.00 26.75 2.57
363 630 1.935933 CAGGACGTGTAACCCTATGC 58.064 55.000 0.00 0.00 26.75 3.14
364 631 0.828677 AGGACGTGTAACCCTATGCC 59.171 55.000 0.00 0.00 25.79 4.40
365 632 0.828677 GGACGTGTAACCCTATGCCT 59.171 55.000 0.00 0.00 0.00 4.75
366 633 1.202498 GGACGTGTAACCCTATGCCTC 60.202 57.143 0.00 0.00 0.00 4.70
367 634 1.479323 GACGTGTAACCCTATGCCTCA 59.521 52.381 0.00 0.00 0.00 3.86
368 635 2.102588 GACGTGTAACCCTATGCCTCAT 59.897 50.000 0.00 0.00 0.00 2.90
369 636 2.102588 ACGTGTAACCCTATGCCTCATC 59.897 50.000 0.00 0.00 0.00 2.92
370 637 2.548067 CGTGTAACCCTATGCCTCATCC 60.548 54.545 0.00 0.00 0.00 3.51
371 638 2.054799 TGTAACCCTATGCCTCATCCC 58.945 52.381 0.00 0.00 0.00 3.85
372 639 2.339769 GTAACCCTATGCCTCATCCCT 58.660 52.381 0.00 0.00 0.00 4.20
373 640 1.439543 AACCCTATGCCTCATCCCTC 58.560 55.000 0.00 0.00 0.00 4.30
374 641 0.570218 ACCCTATGCCTCATCCCTCT 59.430 55.000 0.00 0.00 0.00 3.69
375 642 1.061033 ACCCTATGCCTCATCCCTCTT 60.061 52.381 0.00 0.00 0.00 2.85
376 643 2.061061 CCCTATGCCTCATCCCTCTTT 58.939 52.381 0.00 0.00 0.00 2.52
377 644 3.251484 CCCTATGCCTCATCCCTCTTTA 58.749 50.000 0.00 0.00 0.00 1.85
378 645 3.848975 CCCTATGCCTCATCCCTCTTTAT 59.151 47.826 0.00 0.00 0.00 1.40
379 646 5.032846 CCCTATGCCTCATCCCTCTTTATA 58.967 45.833 0.00 0.00 0.00 0.98
380 647 5.488919 CCCTATGCCTCATCCCTCTTTATAA 59.511 44.000 0.00 0.00 0.00 0.98
381 648 6.012508 CCCTATGCCTCATCCCTCTTTATAAA 60.013 42.308 0.00 0.00 0.00 1.40
382 649 7.108847 CCTATGCCTCATCCCTCTTTATAAAG 58.891 42.308 17.60 17.60 37.36 1.85
383 650 5.975988 TGCCTCATCCCTCTTTATAAAGT 57.024 39.130 21.69 2.73 37.31 2.66
384 651 7.633018 ATGCCTCATCCCTCTTTATAAAGTA 57.367 36.000 21.69 10.09 37.31 2.24
402 669 4.186077 AGTAAGGCTAGCAGGTAGATCA 57.814 45.455 18.24 0.00 0.00 2.92
416 683 6.448852 CAGGTAGATCAAGATCATCTGACAG 58.551 44.000 12.21 0.00 40.22 3.51
432 699 2.803451 GACAGCTAGTCATCGTCTTGG 58.197 52.381 10.30 0.00 46.77 3.61
439 706 4.142447 GCTAGTCATCGTCTTGGTAGTTCA 60.142 45.833 0.00 0.00 0.00 3.18
441 708 6.238676 GCTAGTCATCGTCTTGGTAGTTCATA 60.239 42.308 0.00 0.00 0.00 2.15
442 709 5.892568 AGTCATCGTCTTGGTAGTTCATAC 58.107 41.667 0.00 0.00 0.00 2.39
462 729 4.685513 ACCCACAAATATTGTAACCCCT 57.314 40.909 0.00 0.00 43.23 4.79
463 730 4.606210 ACCCACAAATATTGTAACCCCTC 58.394 43.478 0.00 0.00 43.23 4.30
464 731 3.630312 CCCACAAATATTGTAACCCCTCG 59.370 47.826 0.00 0.00 43.23 4.63
465 732 3.066203 CCACAAATATTGTAACCCCTCGC 59.934 47.826 0.00 0.00 43.23 5.03
466 733 3.945285 CACAAATATTGTAACCCCTCGCT 59.055 43.478 0.00 0.00 43.23 4.93
467 734 4.398044 CACAAATATTGTAACCCCTCGCTT 59.602 41.667 0.00 0.00 43.23 4.68
468 735 4.398044 ACAAATATTGTAACCCCTCGCTTG 59.602 41.667 0.00 0.00 43.27 4.01
469 736 4.497291 AATATTGTAACCCCTCGCTTGA 57.503 40.909 0.00 0.00 0.00 3.02
471 738 2.178912 TTGTAACCCCTCGCTTGAAG 57.821 50.000 0.00 0.00 0.00 3.02
472 739 1.053424 TGTAACCCCTCGCTTGAAGT 58.947 50.000 0.00 0.00 0.00 3.01
473 740 1.270625 TGTAACCCCTCGCTTGAAGTG 60.271 52.381 0.00 0.00 0.00 3.16
474 741 1.053424 TAACCCCTCGCTTGAAGTGT 58.947 50.000 5.58 0.00 0.00 3.55
497 810 0.107214 TTCAATCATGAGGGGCCGAC 60.107 55.000 0.09 0.00 36.78 4.79
513 826 1.117994 CGACCCTAGGTAAACCTCCC 58.882 60.000 8.29 0.00 44.77 4.30
522 835 1.505425 GTAAACCTCCCGTGTGTGAC 58.495 55.000 0.00 0.00 0.00 3.67
523 836 1.069668 GTAAACCTCCCGTGTGTGACT 59.930 52.381 0.00 0.00 0.00 3.41
531 844 0.319900 CCGTGTGTGACTCCTTCTGG 60.320 60.000 0.00 0.00 0.00 3.86
541 854 2.299297 GACTCCTTCTGGAACTTCCGAA 59.701 50.000 3.28 8.58 42.66 4.30
548 861 0.176219 TGGAACTTCCGAACACACGT 59.824 50.000 3.28 0.00 40.17 4.49
558 871 0.106149 GAACACACGTTCCACCCTCT 59.894 55.000 0.00 0.00 44.92 3.69
560 873 0.677842 ACACACGTTCCACCCTCTAC 59.322 55.000 0.00 0.00 0.00 2.59
579 892 1.366366 CCTACCGGGGCTATTGACG 59.634 63.158 6.32 0.00 0.00 4.35
582 895 2.587889 CCGGGGCTATTGACGGTT 59.412 61.111 0.00 0.00 41.34 4.44
583 896 1.523032 CCGGGGCTATTGACGGTTC 60.523 63.158 0.00 0.00 41.34 3.62
584 897 1.520666 CGGGGCTATTGACGGTTCT 59.479 57.895 0.00 0.00 0.00 3.01
585 898 0.529992 CGGGGCTATTGACGGTTCTC 60.530 60.000 0.00 0.00 0.00 2.87
586 899 0.539986 GGGGCTATTGACGGTTCTCA 59.460 55.000 0.00 0.00 0.00 3.27
587 900 1.473434 GGGGCTATTGACGGTTCTCAG 60.473 57.143 0.00 0.00 0.00 3.35
588 901 1.207329 GGGCTATTGACGGTTCTCAGT 59.793 52.381 0.00 0.00 0.00 3.41
589 902 2.429610 GGGCTATTGACGGTTCTCAGTA 59.570 50.000 0.00 0.00 0.00 2.74
654 972 2.680221 GCTGAGTGTCGGTCCTACTCTA 60.680 54.545 14.88 5.33 41.01 2.43
657 975 3.197265 GAGTGTCGGTCCTACTCTACTC 58.803 54.545 9.37 4.42 38.20 2.59
664 982 3.243975 CGGTCCTACTCTACTCTCCTCTC 60.244 56.522 0.00 0.00 0.00 3.20
667 985 2.038033 CCTACTCTACTCTCCTCTCCGG 59.962 59.091 0.00 0.00 0.00 5.14
677 995 0.255033 TCCTCTCCGGAATCGACTGA 59.745 55.000 5.23 0.00 39.40 3.41
678 996 0.382515 CCTCTCCGGAATCGACTGAC 59.617 60.000 5.23 0.00 39.00 3.51
691 1009 2.955660 TCGACTGACCCAAATTTGCTTT 59.044 40.909 12.92 0.00 0.00 3.51
708 1026 3.258872 TGCTTTCAGACAAATGGGGATTG 59.741 43.478 0.00 0.00 0.00 2.67
762 1081 0.965439 TGTTCCCCTCAAATTTGCCG 59.035 50.000 13.54 6.80 0.00 5.69
773 1092 4.244066 TCAAATTTGCCGGAATCAACATG 58.756 39.130 13.54 0.00 0.00 3.21
801 1120 8.322906 TCAAAATAGATTTCATGTGAACTCGT 57.677 30.769 7.25 0.15 38.34 4.18
809 1146 8.399425 AGATTTCATGTGAACTCGTAGTAGTAG 58.601 37.037 7.25 0.00 38.34 2.57
835 1172 5.990996 AGAAGAAGAAGAAGAAGTCAGCAAG 59.009 40.000 0.00 0.00 0.00 4.01
857 1194 1.535860 CCAAAGTTTTGACCGGCACAG 60.536 52.381 0.00 0.00 40.55 3.66
1274 1643 4.452733 CCCCGTCTTCAGGTCCGC 62.453 72.222 0.00 0.00 0.00 5.54
1310 1679 3.134574 TCACTCAGCGGTTACCAATTT 57.865 42.857 1.13 0.00 0.00 1.82
1461 1847 1.734655 ACCACCCTTCATCACACTCT 58.265 50.000 0.00 0.00 0.00 3.24
1468 1855 2.093764 CCTTCATCACACTCTCTGTCCC 60.094 54.545 0.00 0.00 0.00 4.46
1470 1857 1.077828 TCATCACACTCTCTGTCCCCT 59.922 52.381 0.00 0.00 0.00 4.79
1477 1864 4.135153 CTCTGTCCCCTGTCGCCG 62.135 72.222 0.00 0.00 0.00 6.46
1479 1866 4.742201 CTGTCCCCTGTCGCCGTG 62.742 72.222 0.00 0.00 0.00 4.94
1511 1898 3.248602 ACATTTCGTTTCAGACAGTGAGC 59.751 43.478 0.00 0.00 36.21 4.26
1546 1933 4.666412 TGGGGATTCCACTGTTGAATTA 57.334 40.909 6.49 0.00 41.46 1.40
1579 1970 9.363401 ACCACTGAATATAGTACATAGCTGTTA 57.637 33.333 0.00 0.00 36.79 2.41
1595 1986 9.988350 CATAGCTGTTATCGTTTTGTTCTAAAT 57.012 29.630 0.00 0.00 0.00 1.40
1604 1995 5.679355 TCGTTTTGTTCTAAATTGTGCTTCG 59.321 36.000 0.00 0.00 0.00 3.79
1652 2050 4.339530 TGTAGTTCCTGAGGATGATCTTCG 59.660 45.833 0.04 0.00 0.00 3.79
1661 2059 4.098654 TGAGGATGATCTTCGAAGAAGACC 59.901 45.833 30.18 26.20 45.90 3.85
1670 2068 1.595993 CGAAGAAGACCCCGAGAGCA 61.596 60.000 0.00 0.00 0.00 4.26
1672 2070 0.832135 AAGAAGACCCCGAGAGCACA 60.832 55.000 0.00 0.00 0.00 4.57
1789 2193 2.597903 GGTGATCAGGGGCCTTCC 59.402 66.667 0.84 0.00 0.00 3.46
1798 2202 2.747443 GGGGCCTTCCACTAGCTCC 61.747 68.421 0.84 0.00 40.67 4.70
1870 2274 3.821421 ATCGATAAGTTGTCCCTGGAC 57.179 47.619 9.44 9.44 44.77 4.02
1882 2286 1.450312 CCTGGACGATGTTCCTGCC 60.450 63.158 0.00 0.00 36.51 4.85
2002 2406 2.362632 AGGAAGGGCTACGACGCT 60.363 61.111 0.00 0.00 0.00 5.07
2076 2483 6.323996 TGGGTCAAAATGGTTTGTACAATACA 59.676 34.615 9.56 11.72 43.90 2.29
2088 2495 9.394477 GGTTTGTACAATACAATTCTTCTTCAC 57.606 33.333 9.56 0.00 46.89 3.18
2135 2543 5.539955 AGGATTTTACCAAACTGCATTCTGT 59.460 36.000 0.00 0.00 0.00 3.41
2136 2544 6.719370 AGGATTTTACCAAACTGCATTCTGTA 59.281 34.615 0.00 0.00 0.00 2.74
2172 2580 6.451064 AAAGGAACCCGAAACATATGAATC 57.549 37.500 10.38 6.11 0.00 2.52
2210 2619 6.128145 TGTGTTACATAATTTGTGATCACCCG 60.128 38.462 22.85 6.11 39.48 5.28
2218 2627 0.320683 TGTGATCACCCGTTCTGCTG 60.321 55.000 22.85 0.00 0.00 4.41
2275 2684 2.846039 CTATGGCAGCAGCAAAAGAG 57.154 50.000 2.65 0.00 44.61 2.85
2278 2687 1.080705 GGCAGCAGCAAAAGAGCAG 60.081 57.895 2.65 0.00 44.61 4.24
2395 2804 1.348036 CTGGCTATTACTGGGGGTAGC 59.652 57.143 0.00 0.00 38.98 3.58
2400 2809 3.055747 GCTATTACTGGGGGTAGCAGATC 60.056 52.174 0.00 0.00 39.39 2.75
2406 2815 3.282885 CTGGGGGTAGCAGATCTTTTTC 58.717 50.000 0.00 0.00 0.00 2.29
2419 2828 7.174946 AGCAGATCTTTTTCGGAAATTCTGTTA 59.825 33.333 21.26 1.75 33.58 2.41
2457 2867 5.779241 TTGGGTGGTTCATATTCTCTTCT 57.221 39.130 0.00 0.00 0.00 2.85
2458 2868 5.779241 TGGGTGGTTCATATTCTCTTCTT 57.221 39.130 0.00 0.00 0.00 2.52
2459 2869 5.745227 TGGGTGGTTCATATTCTCTTCTTC 58.255 41.667 0.00 0.00 0.00 2.87
2460 2870 5.488919 TGGGTGGTTCATATTCTCTTCTTCT 59.511 40.000 0.00 0.00 0.00 2.85
2526 2936 3.184683 GCTCTTGCTCCGACGCTG 61.185 66.667 0.00 0.00 36.03 5.18
2553 2963 2.543777 TTATGCCTGTTATCGGAGCC 57.456 50.000 0.00 0.00 0.00 4.70
2633 3043 2.174639 CTGCATCATTTGGGGGTAGGTA 59.825 50.000 0.00 0.00 0.00 3.08
2653 3063 9.334947 GTAGGTATAAATGTCCTTTCTAAACCC 57.665 37.037 0.00 0.00 33.34 4.11
2655 3065 8.053355 AGGTATAAATGTCCTTTCTAAACCCTG 58.947 37.037 0.00 0.00 0.00 4.45
2686 3098 6.760127 TGTCATTTTGAGCTTTTGTTTTTCG 58.240 32.000 0.00 0.00 0.00 3.46
2691 3103 4.027572 TGAGCTTTTGTTTTTCGTCCTG 57.972 40.909 0.00 0.00 0.00 3.86
2697 3109 5.675323 GCTTTTGTTTTTCGTCCTGTACTGT 60.675 40.000 0.00 0.00 0.00 3.55
2698 3110 5.883503 TTTGTTTTTCGTCCTGTACTGTT 57.116 34.783 0.00 0.00 0.00 3.16
2699 3112 4.868450 TGTTTTTCGTCCTGTACTGTTG 57.132 40.909 0.00 0.00 0.00 3.33
2704 3117 3.570926 TCGTCCTGTACTGTTGTCATC 57.429 47.619 0.00 0.00 0.00 2.92
2706 3119 2.029380 CGTCCTGTACTGTTGTCATCCA 60.029 50.000 0.00 0.00 0.00 3.41
2709 3122 5.623596 CGTCCTGTACTGTTGTCATCCAATA 60.624 44.000 0.00 0.00 35.02 1.90
2711 3124 5.247337 TCCTGTACTGTTGTCATCCAATACA 59.753 40.000 0.00 0.00 35.02 2.29
2740 3155 2.783135 TCACTTCTTGTTCATGGGAGC 58.217 47.619 0.00 0.00 0.00 4.70
2747 3162 6.769822 ACTTCTTGTTCATGGGAGCTATAATG 59.230 38.462 0.00 0.00 0.00 1.90
2752 3167 4.645863 TCATGGGAGCTATAATGCACAT 57.354 40.909 0.00 0.00 34.99 3.21
2764 3179 9.293404 AGCTATAATGCACATCTCATTTGTATT 57.707 29.630 0.00 0.00 35.87 1.89
2776 3191 9.368674 CATCTCATTTGTATTGGCACATTTTAA 57.631 29.630 0.00 0.00 39.30 1.52
2826 3269 5.705397 AAGAGAGATGGAATGGATCAACA 57.295 39.130 0.00 0.00 0.00 3.33
2946 3393 3.602483 CAAAATGGCAAGAAGGATTGGG 58.398 45.455 0.00 0.00 0.00 4.12
3008 3455 4.446371 CATAATCAGGGTGTGAGTTCCTC 58.554 47.826 0.00 0.00 39.07 3.71
3023 3470 3.638160 AGTTCCTCATCTCTCTCTGATGC 59.362 47.826 0.00 0.00 40.59 3.91
3025 3472 2.177451 TCCTCATCTCTCTCTGATGCCT 59.823 50.000 0.00 0.00 40.59 4.75
3156 3607 3.765511 CTGGATTTGCCTTTGATGAGGAA 59.234 43.478 0.00 0.00 39.25 3.36
3253 3704 8.975410 TTTTCAGATCATTATTTCTGCACTTG 57.025 30.769 0.00 0.00 39.36 3.16
3276 3727 4.413495 TCCACGTGTTTAAAGCTAATGC 57.587 40.909 15.65 0.00 40.05 3.56
3311 3762 1.651987 TTCTTATACCGCTGCACTGC 58.348 50.000 0.00 0.00 0.00 4.40
3411 3862 5.048782 TGGCTGACATCAAGTAATGTTTGTC 60.049 40.000 0.00 0.00 39.93 3.18
3437 3888 9.244799 CGATTTGTACATCTAGCTTGTGTTATA 57.755 33.333 0.00 0.00 0.00 0.98
3441 3892 7.713750 TGTACATCTAGCTTGTGTTATACTCC 58.286 38.462 0.00 0.00 0.00 3.85
3442 3893 6.163135 ACATCTAGCTTGTGTTATACTCCC 57.837 41.667 0.00 0.00 0.00 4.30
3443 3894 5.900123 ACATCTAGCTTGTGTTATACTCCCT 59.100 40.000 0.00 0.00 0.00 4.20
3444 3895 6.041069 ACATCTAGCTTGTGTTATACTCCCTC 59.959 42.308 0.00 0.00 0.00 4.30
3445 3896 4.894114 TCTAGCTTGTGTTATACTCCCTCC 59.106 45.833 0.00 0.00 0.00 4.30
3446 3897 2.431057 AGCTTGTGTTATACTCCCTCCG 59.569 50.000 0.00 0.00 0.00 4.63
3447 3898 2.167900 GCTTGTGTTATACTCCCTCCGT 59.832 50.000 0.00 0.00 0.00 4.69
3448 3899 3.737355 GCTTGTGTTATACTCCCTCCGTC 60.737 52.174 0.00 0.00 0.00 4.79
3449 3900 2.381911 TGTGTTATACTCCCTCCGTCC 58.618 52.381 0.00 0.00 0.00 4.79
3450 3901 1.336125 GTGTTATACTCCCTCCGTCCG 59.664 57.143 0.00 0.00 0.00 4.79
3451 3902 0.957362 GTTATACTCCCTCCGTCCGG 59.043 60.000 0.00 0.00 0.00 5.14
3452 3903 0.846015 TTATACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
3453 3904 0.846015 TATACTCCCTCCGTCCGGAA 59.154 55.000 5.23 0.00 44.66 4.30
3454 3905 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
3455 3906 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3456 3907 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3457 3908 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3458 3909 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3459 3910 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3460 3911 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3461 3912 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3462 3913 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3463 3914 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
3464 3915 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
3465 3916 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
3466 3917 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
3467 3918 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
3468 3919 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
3469 3920 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
3470 3921 6.566942 CGTCCGGAAATACTTGTCATCAAAAA 60.567 38.462 5.23 0.00 32.87 1.94
3471 3922 6.801862 GTCCGGAAATACTTGTCATCAAAAAG 59.198 38.462 5.23 0.00 32.87 2.27
3472 3923 6.712998 TCCGGAAATACTTGTCATCAAAAAGA 59.287 34.615 0.00 0.00 32.87 2.52
3473 3924 7.229707 TCCGGAAATACTTGTCATCAAAAAGAA 59.770 33.333 0.00 0.00 32.87 2.52
3474 3925 7.326063 CCGGAAATACTTGTCATCAAAAAGAAC 59.674 37.037 0.00 0.00 32.87 3.01
3475 3926 7.860373 CGGAAATACTTGTCATCAAAAAGAACA 59.140 33.333 0.00 0.00 32.87 3.18
3476 3927 9.528018 GGAAATACTTGTCATCAAAAAGAACAA 57.472 29.630 0.00 0.00 32.87 2.83
3480 3931 7.832503 ACTTGTCATCAAAAAGAACAAAAGG 57.167 32.000 0.00 0.00 32.87 3.11
3481 3932 6.313658 ACTTGTCATCAAAAAGAACAAAAGGC 59.686 34.615 0.00 0.00 32.87 4.35
3482 3933 4.803088 TGTCATCAAAAAGAACAAAAGGCG 59.197 37.500 0.00 0.00 0.00 5.52
3483 3934 5.040635 GTCATCAAAAAGAACAAAAGGCGA 58.959 37.500 0.00 0.00 0.00 5.54
3484 3935 5.691754 GTCATCAAAAAGAACAAAAGGCGAT 59.308 36.000 0.00 0.00 0.00 4.58
3485 3936 5.691305 TCATCAAAAAGAACAAAAGGCGATG 59.309 36.000 0.00 0.00 0.00 3.84
3486 3937 5.004922 TCAAAAAGAACAAAAGGCGATGT 57.995 34.783 0.00 0.00 0.00 3.06
3487 3938 6.137794 TCAAAAAGAACAAAAGGCGATGTA 57.862 33.333 0.00 0.00 0.00 2.29
3488 3939 6.744112 TCAAAAAGAACAAAAGGCGATGTAT 58.256 32.000 0.00 0.00 0.00 2.29
3489 3940 6.861055 TCAAAAAGAACAAAAGGCGATGTATC 59.139 34.615 0.00 0.00 0.00 2.24
3490 3941 6.575162 AAAAGAACAAAAGGCGATGTATCT 57.425 33.333 0.00 0.00 0.00 1.98
3491 3942 7.681939 AAAAGAACAAAAGGCGATGTATCTA 57.318 32.000 0.00 0.00 0.00 1.98
3492 3943 6.910536 AAGAACAAAAGGCGATGTATCTAG 57.089 37.500 0.00 0.00 0.00 2.43
3493 3944 6.222038 AGAACAAAAGGCGATGTATCTAGA 57.778 37.500 0.00 0.00 0.00 2.43
3494 3945 6.043411 AGAACAAAAGGCGATGTATCTAGAC 58.957 40.000 0.00 0.00 0.00 2.59
3495 3946 4.360563 ACAAAAGGCGATGTATCTAGACG 58.639 43.478 0.00 0.00 0.00 4.18
3496 3947 4.142227 ACAAAAGGCGATGTATCTAGACGT 60.142 41.667 0.00 0.00 0.00 4.34
3497 3948 5.066893 ACAAAAGGCGATGTATCTAGACGTA 59.933 40.000 0.00 0.00 0.00 3.57
3498 3949 5.961396 AAAGGCGATGTATCTAGACGTAT 57.039 39.130 0.00 0.00 0.00 3.06
3499 3950 5.961396 AAGGCGATGTATCTAGACGTATT 57.039 39.130 0.00 0.00 0.00 1.89
3500 3951 5.961396 AGGCGATGTATCTAGACGTATTT 57.039 39.130 0.00 0.00 0.00 1.40
3501 3952 6.328641 AGGCGATGTATCTAGACGTATTTT 57.671 37.500 0.00 0.00 0.00 1.82
3502 3953 7.444629 AGGCGATGTATCTAGACGTATTTTA 57.555 36.000 0.00 0.00 0.00 1.52
3503 3954 7.879070 AGGCGATGTATCTAGACGTATTTTAA 58.121 34.615 0.00 0.00 0.00 1.52
3504 3955 8.521176 AGGCGATGTATCTAGACGTATTTTAAT 58.479 33.333 0.00 0.00 0.00 1.40
3505 3956 9.136952 GGCGATGTATCTAGACGTATTTTAATT 57.863 33.333 0.00 0.00 0.00 1.40
3551 4002 8.972458 TCATTTTGATGATAGGTATTTTCGGA 57.028 30.769 0.00 0.00 0.00 4.55
3552 4003 8.836413 TCATTTTGATGATAGGTATTTTCGGAC 58.164 33.333 0.00 0.00 0.00 4.79
3553 4004 6.838198 TTTGATGATAGGTATTTTCGGACG 57.162 37.500 0.00 0.00 0.00 4.79
3554 4005 4.878439 TGATGATAGGTATTTTCGGACGG 58.122 43.478 0.00 0.00 0.00 4.79
3555 4006 4.585581 TGATGATAGGTATTTTCGGACGGA 59.414 41.667 0.00 0.00 0.00 4.69
3556 4007 4.579454 TGATAGGTATTTTCGGACGGAG 57.421 45.455 0.00 0.00 0.00 4.63
3557 4008 3.319972 TGATAGGTATTTTCGGACGGAGG 59.680 47.826 0.00 0.00 0.00 4.30
3558 4009 0.828677 AGGTATTTTCGGACGGAGGG 59.171 55.000 0.00 0.00 0.00 4.30
3559 4010 0.826062 GGTATTTTCGGACGGAGGGA 59.174 55.000 0.00 0.00 0.00 4.20
3560 4011 1.202498 GGTATTTTCGGACGGAGGGAG 60.202 57.143 0.00 0.00 0.00 4.30
3561 4012 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
3562 4013 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
3630 4081 2.373169 TCTGGAACTGATGAAGCAAGGT 59.627 45.455 0.00 0.00 0.00 3.50
3666 4117 3.003275 TCTTAAGTGGTTTTCTTGCAGCG 59.997 43.478 1.63 0.00 0.00 5.18
3780 4273 7.533426 TCTCTTCATTTTCTTAGCTGATTTGC 58.467 34.615 0.00 0.00 0.00 3.68
3791 4284 3.762779 AGCTGATTTGCGCACTTAAATC 58.237 40.909 20.52 20.52 41.42 2.17
3807 4300 5.699458 ACTTAAATCCAGGAACACTAACACG 59.301 40.000 0.00 0.00 0.00 4.49
3819 4312 7.866393 AGGAACACTAACACGCTATTATATGTC 59.134 37.037 0.00 0.00 0.00 3.06
3859 4352 2.119495 ACTCAACATAGATTCCCGCCT 58.881 47.619 0.00 0.00 0.00 5.52
3860 4353 2.505819 ACTCAACATAGATTCCCGCCTT 59.494 45.455 0.00 0.00 0.00 4.35
3861 4354 3.054361 ACTCAACATAGATTCCCGCCTTT 60.054 43.478 0.00 0.00 0.00 3.11
3864 4357 5.502079 TCAACATAGATTCCCGCCTTTTTA 58.498 37.500 0.00 0.00 0.00 1.52
3867 4360 6.635030 ACATAGATTCCCGCCTTTTTATTC 57.365 37.500 0.00 0.00 0.00 1.75
3871 4364 8.792633 CATAGATTCCCGCCTTTTTATTCATTA 58.207 33.333 0.00 0.00 0.00 1.90
3872 4365 7.039313 AGATTCCCGCCTTTTTATTCATTAC 57.961 36.000 0.00 0.00 0.00 1.89
3981 4476 2.355818 GGGATCACAAGGGAACAGGTAC 60.356 54.545 0.00 0.00 0.00 3.34
3985 4480 2.775384 TCACAAGGGAACAGGTACAGTT 59.225 45.455 2.95 2.95 41.88 3.16
4000 4495 0.947244 CAGTTCCACCTGCAACTCAC 59.053 55.000 0.00 0.00 30.06 3.51
4002 4497 0.947244 GTTCCACCTGCAACTCACTG 59.053 55.000 0.00 0.00 0.00 3.66
4007 4502 2.744202 CCACCTGCAACTCACTGTATTC 59.256 50.000 0.00 0.00 0.00 1.75
4020 4515 3.304559 CACTGTATTCAGCGCAGTTAGTC 59.695 47.826 11.47 0.00 44.77 2.59
4026 4521 2.095461 TCAGCGCAGTTAGTCTCTCAT 58.905 47.619 11.47 0.00 0.00 2.90
4068 4564 0.394899 GAAATCCTCCCAGGCCTGTG 60.395 60.000 30.63 21.04 34.61 3.66
4092 4588 2.755103 CCTCATTGGGTTTTCACTAGGC 59.245 50.000 0.00 0.00 0.00 3.93
4116 4612 3.419915 GCGTGTCATATTCAAGTGCTTG 58.580 45.455 5.63 5.63 41.71 4.01
4172 4668 5.163395 CCTTCTGTGTAGTTATCTCTTCCCC 60.163 48.000 0.00 0.00 0.00 4.81
4226 4722 2.220653 TTTTGATGGAAGCAGAGGGG 57.779 50.000 0.00 0.00 28.24 4.79
4277 4773 1.598685 GGTTTCGGTGAAGGGCGAA 60.599 57.895 0.00 0.00 0.00 4.70
4333 4829 8.523523 TTTTTGTGAGCAGAAACATTATGATG 57.476 30.769 0.00 0.00 39.25 3.07
4359 4860 3.433274 AGTTTGCATGTGTGTCATACTCG 59.567 43.478 1.16 0.00 34.67 4.18
4365 4866 2.879826 TGTGTGTCATACTCGAGCATG 58.120 47.619 18.03 18.03 0.00 4.06
4367 4868 2.600420 GTGTGTCATACTCGAGCATGTG 59.400 50.000 22.08 11.84 0.00 3.21
4372 4873 4.388773 TGTCATACTCGAGCATGTGAAAAC 59.611 41.667 22.08 14.24 0.00 2.43
4386 4887 6.238320 GCATGTGAAAACTTGCCACAATTTTA 60.238 34.615 0.00 0.00 43.02 1.52
4387 4888 6.654793 TGTGAAAACTTGCCACAATTTTAC 57.345 33.333 0.00 0.00 37.80 2.01
4388 4889 6.166279 TGTGAAAACTTGCCACAATTTTACA 58.834 32.000 0.00 0.00 37.80 2.41
4389 4890 6.091441 TGTGAAAACTTGCCACAATTTTACAC 59.909 34.615 0.00 0.00 37.80 2.90
4459 4962 5.762179 AAGATGACTGGATTCTTGGTGTA 57.238 39.130 0.00 0.00 0.00 2.90
4487 4990 1.199327 GCGCAAGGTAAAGAAGGGTTC 59.801 52.381 0.30 0.00 38.28 3.62
4493 4996 2.908351 AGGTAAAGAAGGGTTCCGCTTA 59.092 45.455 0.00 0.00 36.78 3.09
4496 4999 5.055144 GGTAAAGAAGGGTTCCGCTTATAG 58.945 45.833 0.00 0.00 36.78 1.31
4499 5002 4.138487 AGAAGGGTTCCGCTTATAGTTG 57.862 45.455 0.00 0.00 36.78 3.16
4526 5029 5.682234 TCTCCAGCTGAGATGATGTTTTA 57.318 39.130 17.39 0.00 45.29 1.52
4541 5044 7.881643 TGATGTTTTAAAATTCGATGGTTGG 57.118 32.000 3.52 0.00 0.00 3.77
4702 5205 0.179119 CGCCTCGACTCGGGTTTTAT 60.179 55.000 0.00 0.00 0.00 1.40
4707 5210 3.126343 CCTCGACTCGGGTTTTATTTTGG 59.874 47.826 0.00 0.00 0.00 3.28
4757 5260 0.607217 TGTGACCGCCTCTACTCGAA 60.607 55.000 0.00 0.00 0.00 3.71
4765 5268 5.048507 ACCGCCTCTACTCGAATTTTAATC 58.951 41.667 0.00 0.00 0.00 1.75
4787 5290 5.237815 TCTGTCAGCCTTGTTACATAACTG 58.762 41.667 0.00 3.59 37.12 3.16
4794 5297 6.649141 CAGCCTTGTTACATAACTGTTCTACA 59.351 38.462 0.00 0.00 36.79 2.74
4823 5326 0.247736 AGGTTGATGTCACCGAGCTC 59.752 55.000 2.73 2.73 0.00 4.09
4850 5353 0.456312 GCCACTCTTCGTACCTGTCG 60.456 60.000 0.00 0.00 0.00 4.35
4877 5380 0.990374 AGCTGATCCTGAAGCACCTT 59.010 50.000 5.65 0.00 42.06 3.50
4889 5392 4.265893 TGAAGCACCTTGAACTAAACACA 58.734 39.130 0.00 0.00 0.00 3.72
4919 5422 1.217244 CTTCGTCCCCCTACCAACG 59.783 63.158 0.00 0.00 36.50 4.10
4939 5442 0.446616 GCAGTTAGCAAGTAACGGGC 59.553 55.000 0.00 0.00 45.15 6.13
4976 5479 5.821204 AGAAAAGGACACAAATTTCACTCG 58.179 37.500 0.00 0.00 34.91 4.18
4979 5482 4.336889 AGGACACAAATTTCACTCGAGA 57.663 40.909 21.68 0.00 0.00 4.04
5012 5515 6.467723 AAATGAAGTGTCGACATTCTGTAC 57.532 37.500 23.12 6.75 33.90 2.90
5015 5518 6.262193 TGAAGTGTCGACATTCTGTACATA 57.738 37.500 23.12 6.15 0.00 2.29
5021 5524 8.129840 AGTGTCGACATTCTGTACATATAGAAC 58.870 37.037 23.12 1.66 36.48 3.01
5022 5525 7.913821 GTGTCGACATTCTGTACATATAGAACA 59.086 37.037 23.12 0.00 36.48 3.18
5023 5526 8.630037 TGTCGACATTCTGTACATATAGAACAT 58.370 33.333 15.76 0.00 36.48 2.71
5028 5531 9.193133 ACATTCTGTACATATAGAACATAACGC 57.807 33.333 0.00 0.00 36.48 4.84
5029 5532 7.847166 TTCTGTACATATAGAACATAACGCG 57.153 36.000 3.53 3.53 30.03 6.01
5030 5533 6.376177 TCTGTACATATAGAACATAACGCGG 58.624 40.000 12.47 0.00 0.00 6.46
5031 5534 4.919168 TGTACATATAGAACATAACGCGGC 59.081 41.667 12.47 0.00 0.00 6.53
5036 5539 3.151673 GAACATAACGCGGCGAGCC 62.152 63.158 30.94 3.59 44.76 4.70
5058 5561 3.489731 GCTGTATGCAAGCGCTCA 58.510 55.556 12.06 5.63 42.31 4.26
5059 5562 1.351012 GCTGTATGCAAGCGCTCAG 59.649 57.895 12.06 14.05 42.31 3.35
5060 5563 1.364626 GCTGTATGCAAGCGCTCAGT 61.365 55.000 12.06 0.00 42.31 3.41
5062 5565 1.078201 TGTATGCAAGCGCTCAGTCG 61.078 55.000 12.06 0.00 39.64 4.18
5063 5566 0.802222 GTATGCAAGCGCTCAGTCGA 60.802 55.000 12.06 0.00 39.64 4.20
5064 5567 0.802222 TATGCAAGCGCTCAGTCGAC 60.802 55.000 12.06 7.70 39.64 4.20
5065 5568 2.734723 GCAAGCGCTCAGTCGACA 60.735 61.111 19.50 0.00 34.30 4.35
5066 5569 2.724708 GCAAGCGCTCAGTCGACAG 61.725 63.158 19.50 10.43 34.30 3.51
5067 5570 1.081175 CAAGCGCTCAGTCGACAGA 60.081 57.895 19.50 14.75 0.00 3.41
5088 5591 1.906994 TACAAGTGCGCCGTGATTGC 61.907 55.000 15.97 0.00 0.00 3.56
5109 5612 5.859521 GCCTCTTGCATTACATCAGATAG 57.140 43.478 0.00 0.00 40.77 2.08
5114 5617 6.057533 TCTTGCATTACATCAGATAGGTTGG 58.942 40.000 0.00 0.00 0.00 3.77
5116 5619 5.754782 TGCATTACATCAGATAGGTTGGTT 58.245 37.500 0.00 0.00 0.00 3.67
5120 5623 7.013655 GCATTACATCAGATAGGTTGGTTTCAT 59.986 37.037 0.00 0.00 0.00 2.57
5125 5628 7.345653 ACATCAGATAGGTTGGTTTCATCTAGA 59.654 37.037 0.00 0.00 0.00 2.43
5126 5629 7.921041 TCAGATAGGTTGGTTTCATCTAGAT 57.079 36.000 0.00 0.00 0.00 1.98
5127 5630 7.957002 TCAGATAGGTTGGTTTCATCTAGATC 58.043 38.462 1.03 0.00 0.00 2.75
5128 5631 7.786943 TCAGATAGGTTGGTTTCATCTAGATCT 59.213 37.037 1.03 0.00 0.00 2.75
5129 5632 9.083422 CAGATAGGTTGGTTTCATCTAGATCTA 57.917 37.037 1.03 1.69 0.00 1.98
5130 5633 9.308000 AGATAGGTTGGTTTCATCTAGATCTAG 57.692 37.037 21.81 21.81 34.56 2.43
5133 5636 8.472007 AGGTTGGTTTCATCTAGATCTAGTAG 57.528 38.462 25.54 19.32 34.84 2.57
5134 5637 7.014808 AGGTTGGTTTCATCTAGATCTAGTAGC 59.985 40.741 25.54 16.76 34.84 3.58
5135 5638 7.014808 GGTTGGTTTCATCTAGATCTAGTAGCT 59.985 40.741 25.54 9.56 34.84 3.32
5136 5639 9.069082 GTTGGTTTCATCTAGATCTAGTAGCTA 57.931 37.037 25.54 9.68 34.84 3.32
5157 5663 2.110365 AGGAGGGTAGGCCTAGTATGAC 59.890 54.545 14.38 1.93 31.31 3.06
5160 5666 4.264262 GGAGGGTAGGCCTAGTATGACATA 60.264 50.000 14.38 0.00 34.45 2.29
5169 5675 5.330295 GCCTAGTATGACATACCGTTATCG 58.670 45.833 19.76 4.59 36.40 2.92
5172 5678 7.020010 CCTAGTATGACATACCGTTATCGAAC 58.980 42.308 19.76 0.00 36.40 3.95
5188 5694 4.451629 TCGAACTATCAACTCTCCAACC 57.548 45.455 0.00 0.00 0.00 3.77
5199 5705 2.812011 ACTCTCCAACCGCAAATACAAC 59.188 45.455 0.00 0.00 0.00 3.32
5203 5709 3.417101 TCCAACCGCAAATACAACATCT 58.583 40.909 0.00 0.00 0.00 2.90
5277 5783 4.685169 AAACGAAATCAGTATGCAGGTG 57.315 40.909 0.00 0.00 34.76 4.00
5332 5846 4.218417 CCAACCAACCAACTCCTTGAATAG 59.782 45.833 0.00 0.00 0.00 1.73
5333 5847 3.421844 ACCAACCAACTCCTTGAATAGC 58.578 45.455 0.00 0.00 0.00 2.97
5334 5848 3.181434 ACCAACCAACTCCTTGAATAGCA 60.181 43.478 0.00 0.00 0.00 3.49
5335 5849 3.441572 CCAACCAACTCCTTGAATAGCAG 59.558 47.826 0.00 0.00 0.00 4.24
5336 5850 4.074970 CAACCAACTCCTTGAATAGCAGT 58.925 43.478 0.00 0.00 0.00 4.40
5337 5851 5.245531 CAACCAACTCCTTGAATAGCAGTA 58.754 41.667 0.00 0.00 0.00 2.74
5352 5866 3.525537 AGCAGTACAATCTTGGTCATCG 58.474 45.455 0.00 0.00 0.00 3.84
5379 5893 4.232221 CTGCCTAACTTGTGCAATGAAAG 58.768 43.478 0.00 0.00 34.06 2.62
5390 5904 2.030893 TGCAATGAAAGCCTCTCAAACG 60.031 45.455 0.00 0.00 0.00 3.60
5402 5916 4.381079 GCCTCTCAAACGAGTCATCTTACT 60.381 45.833 0.00 0.00 0.00 2.24
5413 5927 7.152645 ACGAGTCATCTTACTACACAAAATGT 58.847 34.615 0.00 0.00 46.06 2.71
5414 5928 7.656137 ACGAGTCATCTTACTACACAAAATGTT 59.344 33.333 0.00 0.00 43.19 2.71
5415 5929 8.162880 CGAGTCATCTTACTACACAAAATGTTC 58.837 37.037 0.00 0.00 43.19 3.18
5416 5930 9.209175 GAGTCATCTTACTACACAAAATGTTCT 57.791 33.333 0.00 0.00 43.19 3.01
5419 5933 8.289618 TCATCTTACTACACAAAATGTTCTTGC 58.710 33.333 0.00 0.00 43.19 4.01
5420 5934 6.655062 TCTTACTACACAAAATGTTCTTGCG 58.345 36.000 0.00 0.00 43.19 4.85
5422 5936 1.476074 ACACAAAATGTTCTTGCGCG 58.524 45.000 0.00 0.00 38.98 6.86
5424 5938 0.248825 ACAAAATGTTCTTGCGCGCA 60.249 45.000 33.09 33.09 0.00 6.09
5425 5939 0.851495 CAAAATGTTCTTGCGCGCAA 59.149 45.000 40.42 40.42 0.00 4.85
5426 5940 0.852136 AAAATGTTCTTGCGCGCAAC 59.148 45.000 40.23 31.45 0.00 4.17
5427 5941 0.248825 AAATGTTCTTGCGCGCAACA 60.249 45.000 40.23 35.64 34.61 3.33
5428 5942 0.934436 AATGTTCTTGCGCGCAACAC 60.934 50.000 40.23 34.75 32.96 3.32
5429 5943 2.024022 GTTCTTGCGCGCAACACA 59.976 55.556 40.23 24.47 0.00 3.72
5430 5944 1.370414 GTTCTTGCGCGCAACACAT 60.370 52.632 40.23 0.00 0.00 3.21
5432 5946 1.780025 TTCTTGCGCGCAACACATCA 61.780 50.000 40.23 20.56 0.00 3.07
5436 5950 2.387445 GCGCGCAACACATCAGGTA 61.387 57.895 29.10 0.00 0.00 3.08
5437 5951 1.705337 GCGCGCAACACATCAGGTAT 61.705 55.000 29.10 0.00 0.00 2.73
5438 5952 0.026674 CGCGCAACACATCAGGTATG 59.973 55.000 8.75 0.00 41.74 2.39
5440 5954 1.062587 GCGCAACACATCAGGTATGTC 59.937 52.381 0.30 0.00 46.15 3.06
5441 5955 1.324435 CGCAACACATCAGGTATGTCG 59.676 52.381 0.00 0.00 46.15 4.35
5442 5956 1.062587 GCAACACATCAGGTATGTCGC 59.937 52.381 0.00 0.00 46.15 5.19
5444 5958 0.179111 ACACATCAGGTATGTCGCGG 60.179 55.000 6.13 0.00 46.15 6.46
5445 5959 0.179111 CACATCAGGTATGTCGCGGT 60.179 55.000 6.13 0.00 46.15 5.68
5446 5960 0.535335 ACATCAGGTATGTCGCGGTT 59.465 50.000 6.13 0.00 46.15 4.44
5449 5963 2.787601 TCAGGTATGTCGCGGTTATC 57.212 50.000 6.13 0.00 0.00 1.75
5450 5964 2.025898 TCAGGTATGTCGCGGTTATCA 58.974 47.619 6.13 0.00 0.00 2.15
5452 5966 1.752498 AGGTATGTCGCGGTTATCACA 59.248 47.619 6.13 1.56 0.00 3.58
5469 6213 8.094548 GGTTATCACATATGTATTCACTAGCCA 58.905 37.037 8.32 0.00 0.00 4.75
5471 6215 9.875691 TTATCACATATGTATTCACTAGCCATC 57.124 33.333 8.32 0.00 0.00 3.51
5493 6237 3.302699 CGGTTCGTCGAAAAATAGTCTCC 59.697 47.826 9.70 2.46 0.00 3.71
5494 6238 4.492611 GGTTCGTCGAAAAATAGTCTCCT 58.507 43.478 9.70 0.00 0.00 3.69
5495 6239 4.326548 GGTTCGTCGAAAAATAGTCTCCTG 59.673 45.833 9.70 0.00 0.00 3.86
5496 6240 4.778534 TCGTCGAAAAATAGTCTCCTGT 57.221 40.909 0.00 0.00 0.00 4.00
5499 6243 4.380655 CGTCGAAAAATAGTCTCCTGTCCT 60.381 45.833 0.00 0.00 0.00 3.85
5513 6270 6.602406 GTCTCCTGTCCTAGATTACAACACTA 59.398 42.308 0.00 0.00 0.00 2.74
5561 6318 6.261118 GCATCAGATAACCAAGACAATTCAC 58.739 40.000 0.00 0.00 0.00 3.18
5579 6336 3.909430 TCACTCGGACATCACAGTTTAC 58.091 45.455 0.00 0.00 0.00 2.01
5580 6337 3.572682 TCACTCGGACATCACAGTTTACT 59.427 43.478 0.00 0.00 0.00 2.24
5581 6338 4.038763 TCACTCGGACATCACAGTTTACTT 59.961 41.667 0.00 0.00 0.00 2.24
5582 6339 4.386049 CACTCGGACATCACAGTTTACTTC 59.614 45.833 0.00 0.00 0.00 3.01
5583 6340 4.038763 ACTCGGACATCACAGTTTACTTCA 59.961 41.667 0.00 0.00 0.00 3.02
5584 6341 4.304110 TCGGACATCACAGTTTACTTCAC 58.696 43.478 0.00 0.00 0.00 3.18
5588 6345 6.430451 GGACATCACAGTTTACTTCACTTTG 58.570 40.000 0.00 0.00 0.00 2.77
5622 6379 3.535561 GAATCGAGGCCAAGATGAAAGA 58.464 45.455 5.01 0.00 0.00 2.52
5623 6380 3.634397 ATCGAGGCCAAGATGAAAGAA 57.366 42.857 5.01 0.00 0.00 2.52
5624 6381 2.977914 TCGAGGCCAAGATGAAAGAAG 58.022 47.619 5.01 0.00 0.00 2.85
5658 6415 1.002990 CACATGCAGCTCCAGTGGA 60.003 57.895 12.40 12.40 0.00 4.02
5758 6515 9.844257 ACATATATATACTCGGTACTCCTTACC 57.156 37.037 0.00 0.00 46.46 2.85
5772 6529 4.235360 CTCCTTACCACTACAGTTGAACG 58.765 47.826 0.00 0.00 0.00 3.95
5773 6530 3.890756 TCCTTACCACTACAGTTGAACGA 59.109 43.478 0.00 0.00 0.00 3.85
5783 6540 3.172050 ACAGTTGAACGAAGATCGATCG 58.828 45.455 19.33 18.46 43.32 3.69
5823 6580 2.223203 ACGTCGACTACCATCGTGATTC 60.223 50.000 14.70 0.00 42.80 2.52
5824 6581 2.223180 CGTCGACTACCATCGTGATTCA 60.223 50.000 14.70 0.00 42.80 2.57
5825 6582 3.106672 GTCGACTACCATCGTGATTCAC 58.893 50.000 8.70 6.73 42.80 3.18
5826 6583 3.014623 TCGACTACCATCGTGATTCACT 58.985 45.455 14.54 0.00 42.80 3.41
5831 6588 5.111989 ACTACCATCGTGATTCACTGATTG 58.888 41.667 14.54 14.76 30.18 2.67
5869 6626 2.799126 AAGCGGAAACATATGACCCA 57.201 45.000 10.38 0.00 0.00 4.51
5889 6646 6.582636 ACCCAAAAGAATCTCAAAAACTTCC 58.417 36.000 0.00 0.00 0.00 3.46
5890 6647 6.156083 ACCCAAAAGAATCTCAAAAACTTCCA 59.844 34.615 0.00 0.00 0.00 3.53
5893 6650 9.112725 CCAAAAGAATCTCAAAAACTTCCATTT 57.887 29.630 0.00 0.00 0.00 2.32
5895 6652 8.579682 AAAGAATCTCAAAAACTTCCATTTCG 57.420 30.769 0.00 0.00 0.00 3.46
5918 6675 3.009301 ACTCTTGTAGAAACGACGTGG 57.991 47.619 0.00 0.00 0.00 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 89 5.684704 TGAATCCTGAAGACTTGAACAACT 58.315 37.500 0.00 0.00 0.00 3.16
148 181 9.804758 TTGAAAACCAACAAGATTAATAAACGT 57.195 25.926 0.00 0.00 0.00 3.99
198 231 6.206829 GGTACAAAGAAAGCATAAGGTGAACT 59.793 38.462 0.00 0.00 0.00 3.01
204 237 9.778741 TCATATAGGTACAAAGAAAGCATAAGG 57.221 33.333 0.00 0.00 0.00 2.69
227 260 7.466746 TTTTGAAACTTAGGCTAAGCATCAT 57.533 32.000 28.53 15.94 39.39 2.45
253 286 5.807011 GCAAAACTCCGAATGCTCATTTTAT 59.193 36.000 0.00 0.00 35.93 1.40
254 287 5.160641 GCAAAACTCCGAATGCTCATTTTA 58.839 37.500 0.00 0.00 35.93 1.52
257 290 2.557924 TGCAAAACTCCGAATGCTCATT 59.442 40.909 0.00 0.00 39.49 2.57
258 291 2.161855 TGCAAAACTCCGAATGCTCAT 58.838 42.857 0.00 0.00 39.49 2.90
270 307 5.415221 TCAAAGTTTCGGAAATGCAAAACT 58.585 33.333 6.43 6.20 42.20 2.66
283 320 4.672409 AGCCTTTCAAGTTCAAAGTTTCG 58.328 39.130 0.00 0.00 0.00 3.46
302 339 0.383949 CTACAGAGAGCCTTCGAGCC 59.616 60.000 0.00 0.00 0.00 4.70
303 340 0.383949 CCTACAGAGAGCCTTCGAGC 59.616 60.000 0.00 0.00 0.00 5.03
304 341 1.757682 ACCTACAGAGAGCCTTCGAG 58.242 55.000 0.00 0.00 0.00 4.04
307 574 3.093057 TCTCAACCTACAGAGAGCCTTC 58.907 50.000 0.00 0.00 36.05 3.46
319 586 1.623811 GTGGCTTGGAGTCTCAACCTA 59.376 52.381 1.47 0.00 0.00 3.08
361 628 5.975988 ACTTTATAAAGAGGGATGAGGCA 57.024 39.130 27.92 0.00 39.31 4.75
363 630 6.937465 GCCTTACTTTATAAAGAGGGATGAGG 59.063 42.308 27.92 20.24 39.31 3.86
364 631 7.740805 AGCCTTACTTTATAAAGAGGGATGAG 58.259 38.462 27.92 12.94 39.31 2.90
365 632 7.691993 AGCCTTACTTTATAAAGAGGGATGA 57.308 36.000 27.92 4.96 39.31 2.92
366 633 7.604545 GCTAGCCTTACTTTATAAAGAGGGATG 59.395 40.741 27.92 18.08 39.31 3.51
367 634 7.292591 TGCTAGCCTTACTTTATAAAGAGGGAT 59.707 37.037 27.92 23.47 39.31 3.85
368 635 6.614087 TGCTAGCCTTACTTTATAAAGAGGGA 59.386 38.462 27.92 10.07 39.31 4.20
369 636 6.827727 TGCTAGCCTTACTTTATAAAGAGGG 58.172 40.000 27.92 23.50 39.31 4.30
370 637 6.931840 CCTGCTAGCCTTACTTTATAAAGAGG 59.068 42.308 27.92 24.05 39.31 3.69
371 638 7.501844 ACCTGCTAGCCTTACTTTATAAAGAG 58.498 38.462 27.92 16.82 39.31 2.85
372 639 7.433537 ACCTGCTAGCCTTACTTTATAAAGA 57.566 36.000 27.92 11.58 39.31 2.52
373 640 8.639761 TCTACCTGCTAGCCTTACTTTATAAAG 58.360 37.037 21.21 21.21 41.73 1.85
374 641 8.543293 TCTACCTGCTAGCCTTACTTTATAAA 57.457 34.615 13.29 0.00 0.00 1.40
375 642 8.722622 ATCTACCTGCTAGCCTTACTTTATAA 57.277 34.615 13.29 0.00 0.00 0.98
376 643 7.948447 TGATCTACCTGCTAGCCTTACTTTATA 59.052 37.037 13.29 0.00 0.00 0.98
377 644 6.782988 TGATCTACCTGCTAGCCTTACTTTAT 59.217 38.462 13.29 0.00 0.00 1.40
378 645 6.134055 TGATCTACCTGCTAGCCTTACTTTA 58.866 40.000 13.29 0.00 0.00 1.85
379 646 4.962995 TGATCTACCTGCTAGCCTTACTTT 59.037 41.667 13.29 0.00 0.00 2.66
380 647 4.547671 TGATCTACCTGCTAGCCTTACTT 58.452 43.478 13.29 0.00 0.00 2.24
381 648 4.186077 TGATCTACCTGCTAGCCTTACT 57.814 45.455 13.29 0.00 0.00 2.24
382 649 4.585162 TCTTGATCTACCTGCTAGCCTTAC 59.415 45.833 13.29 0.00 0.00 2.34
383 650 4.804597 TCTTGATCTACCTGCTAGCCTTA 58.195 43.478 13.29 0.00 0.00 2.69
384 651 3.647636 TCTTGATCTACCTGCTAGCCTT 58.352 45.455 13.29 0.00 0.00 4.35
416 683 4.142447 TGAACTACCAAGACGATGACTAGC 60.142 45.833 0.00 0.00 0.00 3.42
439 706 6.349897 AGGGGTTACAATATTTGTGGGTAT 57.650 37.500 3.22 0.00 45.03 2.73
441 708 4.606210 GAGGGGTTACAATATTTGTGGGT 58.394 43.478 3.22 0.00 45.03 4.51
442 709 3.630312 CGAGGGGTTACAATATTTGTGGG 59.370 47.826 3.22 0.00 45.03 4.61
443 710 3.066203 GCGAGGGGTTACAATATTTGTGG 59.934 47.826 3.22 0.00 45.03 4.17
444 711 3.945285 AGCGAGGGGTTACAATATTTGTG 59.055 43.478 3.22 0.00 45.03 3.33
510 823 0.469331 AGAAGGAGTCACACACGGGA 60.469 55.000 0.00 0.00 0.00 5.14
513 826 0.673985 TCCAGAAGGAGTCACACACG 59.326 55.000 0.00 0.00 39.61 4.49
522 835 2.037251 TGTTCGGAAGTTCCAGAAGGAG 59.963 50.000 21.76 3.67 46.74 3.69
523 836 2.043992 TGTTCGGAAGTTCCAGAAGGA 58.956 47.619 21.76 7.48 43.93 3.36
531 844 2.640375 GAACGTGTGTTCGGAAGTTC 57.360 50.000 0.00 0.00 44.55 3.01
541 854 0.677842 GTAGAGGGTGGAACGTGTGT 59.322 55.000 0.00 0.00 38.12 3.72
548 861 0.032813 CGGTAGGGTAGAGGGTGGAA 60.033 60.000 0.00 0.00 0.00 3.53
579 892 1.201880 GAGGTGACGGTACTGAGAACC 59.798 57.143 9.17 12.14 0.00 3.62
580 893 2.095161 CAGAGGTGACGGTACTGAGAAC 60.095 54.545 9.17 3.33 0.00 3.01
581 894 2.160205 CAGAGGTGACGGTACTGAGAA 58.840 52.381 9.17 0.00 0.00 2.87
582 895 1.073444 ACAGAGGTGACGGTACTGAGA 59.927 52.381 9.17 0.00 33.53 3.27
583 896 1.469308 GACAGAGGTGACGGTACTGAG 59.531 57.143 9.17 0.00 33.53 3.35
584 897 1.073444 AGACAGAGGTGACGGTACTGA 59.927 52.381 9.17 0.00 33.53 3.41
585 898 1.469308 GAGACAGAGGTGACGGTACTG 59.531 57.143 0.00 0.00 35.14 2.74
586 899 1.823797 GAGACAGAGGTGACGGTACT 58.176 55.000 0.00 0.00 0.00 2.73
587 900 0.447011 CGAGACAGAGGTGACGGTAC 59.553 60.000 0.00 0.00 0.00 3.34
588 901 0.035881 ACGAGACAGAGGTGACGGTA 59.964 55.000 0.00 0.00 0.00 4.02
589 902 1.228184 ACGAGACAGAGGTGACGGT 60.228 57.895 0.00 0.00 0.00 4.83
635 948 2.570752 AGTAGAGTAGGACCGACACTCA 59.429 50.000 19.69 8.38 40.94 3.41
636 949 3.118665 AGAGTAGAGTAGGACCGACACTC 60.119 52.174 7.91 10.80 39.19 3.51
637 950 2.839425 AGAGTAGAGTAGGACCGACACT 59.161 50.000 9.46 9.46 0.00 3.55
638 951 3.197265 GAGAGTAGAGTAGGACCGACAC 58.803 54.545 7.54 0.55 0.00 3.67
640 953 2.435437 AGGAGAGTAGAGTAGGACCGAC 59.565 54.545 0.00 0.00 0.00 4.79
641 954 2.699846 GAGGAGAGTAGAGTAGGACCGA 59.300 54.545 0.00 0.00 0.00 4.69
642 955 2.701951 AGAGGAGAGTAGAGTAGGACCG 59.298 54.545 0.00 0.00 0.00 4.79
643 956 3.072038 GGAGAGGAGAGTAGAGTAGGACC 59.928 56.522 0.00 0.00 0.00 4.46
664 982 0.036765 TTTGGGTCAGTCGATTCCGG 60.037 55.000 0.00 0.00 36.24 5.14
667 985 3.191371 AGCAAATTTGGGTCAGTCGATTC 59.809 43.478 19.47 0.00 0.00 2.52
677 995 4.751767 TTGTCTGAAAGCAAATTTGGGT 57.248 36.364 19.47 3.68 29.44 4.51
678 996 5.049267 CCATTTGTCTGAAAGCAAATTTGGG 60.049 40.000 19.47 3.48 43.22 4.12
691 1009 1.076841 TGCCAATCCCCATTTGTCTGA 59.923 47.619 0.00 0.00 0.00 3.27
723 1041 6.315393 GGAACAAACCGTGATCTAACATGTAT 59.685 38.462 0.00 0.00 0.00 2.29
724 1042 5.640357 GGAACAAACCGTGATCTAACATGTA 59.360 40.000 0.00 0.00 0.00 2.29
725 1043 4.454504 GGAACAAACCGTGATCTAACATGT 59.545 41.667 0.00 0.00 0.00 3.21
726 1044 4.142687 GGGAACAAACCGTGATCTAACATG 60.143 45.833 0.00 0.00 0.00 3.21
727 1045 4.007659 GGGAACAAACCGTGATCTAACAT 58.992 43.478 0.00 0.00 0.00 2.71
728 1046 3.404899 GGGAACAAACCGTGATCTAACA 58.595 45.455 0.00 0.00 0.00 2.41
729 1047 2.745821 GGGGAACAAACCGTGATCTAAC 59.254 50.000 0.00 0.00 0.00 2.34
730 1048 2.640826 AGGGGAACAAACCGTGATCTAA 59.359 45.455 0.00 0.00 0.00 2.10
731 1049 2.235402 GAGGGGAACAAACCGTGATCTA 59.765 50.000 0.00 0.00 0.00 1.98
732 1050 1.003233 GAGGGGAACAAACCGTGATCT 59.997 52.381 0.00 0.00 0.00 2.75
733 1051 1.271163 TGAGGGGAACAAACCGTGATC 60.271 52.381 0.00 0.00 0.00 2.92
734 1052 0.768622 TGAGGGGAACAAACCGTGAT 59.231 50.000 0.00 0.00 0.00 3.06
735 1053 0.547075 TTGAGGGGAACAAACCGTGA 59.453 50.000 0.00 0.00 0.00 4.35
739 1057 3.138304 GCAAATTTGAGGGGAACAAACC 58.862 45.455 22.31 0.00 39.48 3.27
797 1116 8.706492 TCTTCTTCTTCTTCTACTACTACGAG 57.294 38.462 0.00 0.00 0.00 4.18
799 1118 9.153721 TCTTCTTCTTCTTCTTCTACTACTACG 57.846 37.037 0.00 0.00 0.00 3.51
809 1146 5.988561 TGCTGACTTCTTCTTCTTCTTCTTC 59.011 40.000 0.00 0.00 0.00 2.87
835 1172 1.300620 GCCGGTCAAAACTTTGGGC 60.301 57.895 1.90 4.20 38.66 5.36
857 1194 0.247775 CGCCGGTGGTTTTTATACGC 60.248 55.000 7.26 0.00 0.00 4.42
909 1248 2.737376 GGCGACGTGGACCTGTTC 60.737 66.667 0.11 0.00 0.00 3.18
986 1346 2.124736 CCATGGCTGGTGGTACGG 60.125 66.667 0.00 0.00 37.79 4.02
1223 1592 3.973267 GAGTCGTGCGTCCAGAGCC 62.973 68.421 0.00 0.00 0.00 4.70
1310 1679 5.588648 CCAAAGTGGTAAGTGAAACTGAAGA 59.411 40.000 0.00 0.00 38.65 2.87
1444 1830 2.301296 ACAGAGAGTGTGATGAAGGGTG 59.699 50.000 0.00 0.00 38.28 4.61
1461 1847 4.988716 ACGGCGACAGGGGACAGA 62.989 66.667 16.62 0.00 0.00 3.41
1468 1855 3.605749 ATCCAACCACGGCGACAGG 62.606 63.158 16.62 15.08 0.00 4.00
1470 1857 0.035036 TAAATCCAACCACGGCGACA 59.965 50.000 16.62 0.00 0.00 4.35
1477 1864 6.210078 TGAAACGAAATGTAAATCCAACCAC 58.790 36.000 0.00 0.00 0.00 4.16
1479 1866 6.581166 GTCTGAAACGAAATGTAAATCCAACC 59.419 38.462 0.00 0.00 0.00 3.77
1511 1898 0.609957 TCCCCAAATGTGCTCTGCAG 60.610 55.000 7.63 7.63 40.08 4.41
1579 1970 6.359617 CGAAGCACAATTTAGAACAAAACGAT 59.640 34.615 0.00 0.00 0.00 3.73
1604 1995 0.723981 GAAGTGGAATCAGACGCAGC 59.276 55.000 0.00 0.00 0.00 5.25
1652 2050 0.108567 GTGCTCTCGGGGTCTTCTTC 60.109 60.000 0.00 0.00 0.00 2.87
1678 2076 1.076332 CGTGTTCCTGGTCGGATTTC 58.924 55.000 0.00 0.00 42.70 2.17
1752 2150 4.099266 CACCCTCTTTGGTTGTTTCATCAA 59.901 41.667 0.00 0.00 36.12 2.57
1753 2151 3.636300 CACCCTCTTTGGTTGTTTCATCA 59.364 43.478 0.00 0.00 36.12 3.07
1789 2193 2.590007 GCCATGCCGGAGCTAGTG 60.590 66.667 5.05 0.00 40.80 2.74
1834 2238 0.807667 CGATTCCCAGCAAGTCCTCG 60.808 60.000 0.00 0.00 0.00 4.63
1870 2274 1.077501 ATGGGTGGCAGGAACATCG 60.078 57.895 0.00 0.00 0.00 3.84
1876 2280 3.716195 CGGTGATGGGTGGCAGGA 61.716 66.667 0.00 0.00 0.00 3.86
1882 2286 0.541392 TCATCTTCCGGTGATGGGTG 59.459 55.000 27.05 13.05 41.01 4.61
1936 2340 3.454587 TTGCGACACGGGCTTGTCT 62.455 57.895 14.89 0.00 43.30 3.41
1939 2343 2.664851 TCTTGCGACACGGGCTTG 60.665 61.111 0.00 0.00 0.00 4.01
2088 2495 8.316946 TCCTATCCATAATTATCACTGCTGAAG 58.683 37.037 0.00 0.00 0.00 3.02
2135 2543 6.265649 TCGGGTTCCTTTTTGTTTGATGATTA 59.734 34.615 0.00 0.00 0.00 1.75
2136 2544 5.069781 TCGGGTTCCTTTTTGTTTGATGATT 59.930 36.000 0.00 0.00 0.00 2.57
2172 2580 3.322369 TGTAACACAGCCTGAATACACG 58.678 45.455 0.00 0.00 0.00 4.49
2210 2619 1.082690 GCTTCCTACAGCAGCAGAAC 58.917 55.000 0.00 0.00 39.83 3.01
2218 2627 0.249657 CCTCGATGGCTTCCTACAGC 60.250 60.000 0.00 0.00 39.28 4.40
2275 2684 0.110486 TTTCCCCTGACTGTTCCTGC 59.890 55.000 0.00 0.00 0.00 4.85
2278 2687 1.235724 CGTTTTCCCCTGACTGTTCC 58.764 55.000 0.00 0.00 0.00 3.62
2395 2804 9.334693 CTTAACAGAATTTCCGAAAAAGATCTG 57.665 33.333 18.28 18.28 38.40 2.90
2400 2809 7.809806 AGCATCTTAACAGAATTTCCGAAAAAG 59.190 33.333 0.00 0.00 30.76 2.27
2406 2815 8.964420 TTTTTAGCATCTTAACAGAATTTCCG 57.036 30.769 0.00 0.00 30.76 4.30
2434 2844 6.332976 AGAAGAGAATATGAACCACCCAAT 57.667 37.500 0.00 0.00 0.00 3.16
2457 2867 6.650807 CAGCTAAACCTGTCATGTAGAAAGAA 59.349 38.462 0.00 0.00 32.96 2.52
2458 2868 6.166279 CAGCTAAACCTGTCATGTAGAAAGA 58.834 40.000 0.00 0.00 32.96 2.52
2459 2869 5.163814 GCAGCTAAACCTGTCATGTAGAAAG 60.164 44.000 0.00 0.00 35.28 2.62
2460 2870 4.695455 GCAGCTAAACCTGTCATGTAGAAA 59.305 41.667 0.00 0.00 35.28 2.52
2520 2930 0.248621 GCATAATTGTGCCCAGCGTC 60.249 55.000 15.69 0.00 39.18 5.19
2553 2963 1.066605 GCCATAGCAGCAAATCCACTG 59.933 52.381 0.00 0.00 39.53 3.66
2633 3043 6.663523 CCACAGGGTTTAGAAAGGACATTTAT 59.336 38.462 0.00 0.00 0.00 1.40
2653 3063 3.504906 AGCTCAAAATGACATCACCACAG 59.495 43.478 0.00 0.00 0.00 3.66
2655 3065 4.510038 AAGCTCAAAATGACATCACCAC 57.490 40.909 0.00 0.00 0.00 4.16
2686 3098 3.678056 TGGATGACAACAGTACAGGAC 57.322 47.619 0.00 0.00 0.00 3.85
2691 3103 7.609760 TCATTGTATTGGATGACAACAGTAC 57.390 36.000 8.36 8.36 42.94 2.73
2699 3112 6.021596 GTGAAACGTCATTGTATTGGATGAC 58.978 40.000 6.44 6.44 45.40 3.06
2716 3129 3.563808 TCCCATGAACAAGAAGTGAAACG 59.436 43.478 0.00 0.00 45.86 3.60
2740 3155 9.836076 CCAATACAAATGAGATGTGCATTATAG 57.164 33.333 0.00 0.00 35.06 1.31
2747 3162 4.107622 GTGCCAATACAAATGAGATGTGC 58.892 43.478 0.00 0.00 32.27 4.57
2752 3167 9.770097 TTTTAAAATGTGCCAATACAAATGAGA 57.230 25.926 0.00 0.00 33.69 3.27
2783 3198 8.219868 TCTCTTTTGGCAATCCATCTAATCATA 58.780 33.333 0.00 0.00 43.05 2.15
2826 3269 9.890629 TTTCTGCACTACTACATGATTATTCTT 57.109 29.630 0.00 0.00 0.00 2.52
2934 3381 6.200878 TCTTTTACACTCCCAATCCTTCTT 57.799 37.500 0.00 0.00 0.00 2.52
2946 3393 9.020813 GGTTTGAACTCAAATTCTTTTACACTC 57.979 33.333 8.07 0.00 46.12 3.51
3008 3455 2.036217 GGTGAGGCATCAGAGAGAGATG 59.964 54.545 0.00 0.00 44.38 2.90
3023 3470 3.828451 AGTGAACATGGAATTTGGTGAGG 59.172 43.478 0.00 0.00 0.00 3.86
3025 3472 3.573538 CCAGTGAACATGGAATTTGGTGA 59.426 43.478 0.00 0.00 40.51 4.02
3071 3518 5.645067 TGACATTGAGGCTAAATCAGTTCAG 59.355 40.000 0.00 0.00 0.00 3.02
3083 3530 1.637553 AGGGTGAATGACATTGAGGCT 59.362 47.619 5.14 0.00 0.00 4.58
3120 3571 3.463048 AATCCAGAAACCAAGATGCCT 57.537 42.857 0.00 0.00 0.00 4.75
3156 3607 4.717280 CCTTCCCAAGGTCTAATGTAGTCT 59.283 45.833 0.00 0.00 43.95 3.24
3248 3699 4.024048 AGCTTTAAACACGTGGATCAAGTG 60.024 41.667 21.57 11.27 46.18 3.16
3253 3704 5.028375 GCATTAGCTTTAAACACGTGGATC 58.972 41.667 21.57 1.52 37.91 3.36
3276 3727 9.343103 CGGTATAAGAATGTTGTACTGCTATAG 57.657 37.037 0.00 0.00 0.00 1.31
3311 3762 0.537188 ACCTGCCAGTCATTAGTCCG 59.463 55.000 0.00 0.00 0.00 4.79
3411 3862 6.408858 AACACAAGCTAGATGTACAAATCG 57.591 37.500 0.00 0.00 0.00 3.34
3437 3888 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3438 3889 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3441 3892 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3442 3893 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
3443 3894 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
3444 3895 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
3445 3896 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
3446 3897 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
3447 3898 6.712998 TCTTTTTGATGACAAGTATTTCCGGA 59.287 34.615 0.00 0.00 37.32 5.14
3448 3899 6.908825 TCTTTTTGATGACAAGTATTTCCGG 58.091 36.000 0.00 0.00 37.32 5.14
3449 3900 7.860373 TGTTCTTTTTGATGACAAGTATTTCCG 59.140 33.333 0.00 0.00 37.32 4.30
3450 3901 9.528018 TTGTTCTTTTTGATGACAAGTATTTCC 57.472 29.630 0.00 0.00 37.32 3.13
3454 3905 9.533253 CCTTTTGTTCTTTTTGATGACAAGTAT 57.467 29.630 0.00 0.00 37.32 2.12
3455 3906 7.491048 GCCTTTTGTTCTTTTTGATGACAAGTA 59.509 33.333 0.00 0.00 37.32 2.24
3456 3907 6.313658 GCCTTTTGTTCTTTTTGATGACAAGT 59.686 34.615 0.00 0.00 37.32 3.16
3457 3908 6.508404 CGCCTTTTGTTCTTTTTGATGACAAG 60.508 38.462 0.00 0.00 37.32 3.16
3458 3909 5.290643 CGCCTTTTGTTCTTTTTGATGACAA 59.709 36.000 0.00 0.00 0.00 3.18
3459 3910 4.803088 CGCCTTTTGTTCTTTTTGATGACA 59.197 37.500 0.00 0.00 0.00 3.58
3460 3911 5.040635 TCGCCTTTTGTTCTTTTTGATGAC 58.959 37.500 0.00 0.00 0.00 3.06
3461 3912 5.255710 TCGCCTTTTGTTCTTTTTGATGA 57.744 34.783 0.00 0.00 0.00 2.92
3462 3913 5.463061 ACATCGCCTTTTGTTCTTTTTGATG 59.537 36.000 0.00 0.00 36.47 3.07
3463 3914 5.600696 ACATCGCCTTTTGTTCTTTTTGAT 58.399 33.333 0.00 0.00 0.00 2.57
3464 3915 5.004922 ACATCGCCTTTTGTTCTTTTTGA 57.995 34.783 0.00 0.00 0.00 2.69
3465 3916 6.863126 AGATACATCGCCTTTTGTTCTTTTTG 59.137 34.615 0.00 0.00 0.00 2.44
3466 3917 6.981722 AGATACATCGCCTTTTGTTCTTTTT 58.018 32.000 0.00 0.00 0.00 1.94
3467 3918 6.575162 AGATACATCGCCTTTTGTTCTTTT 57.425 33.333 0.00 0.00 0.00 2.27
3468 3919 7.064728 GTCTAGATACATCGCCTTTTGTTCTTT 59.935 37.037 0.00 0.00 0.00 2.52
3469 3920 6.535508 GTCTAGATACATCGCCTTTTGTTCTT 59.464 38.462 0.00 0.00 0.00 2.52
3470 3921 6.043411 GTCTAGATACATCGCCTTTTGTTCT 58.957 40.000 0.00 0.00 0.00 3.01
3471 3922 5.051641 CGTCTAGATACATCGCCTTTTGTTC 60.052 44.000 0.00 0.00 0.00 3.18
3472 3923 4.804139 CGTCTAGATACATCGCCTTTTGTT 59.196 41.667 0.00 0.00 0.00 2.83
3473 3924 4.142227 ACGTCTAGATACATCGCCTTTTGT 60.142 41.667 0.00 0.00 0.00 2.83
3474 3925 4.360563 ACGTCTAGATACATCGCCTTTTG 58.639 43.478 0.00 0.00 0.00 2.44
3475 3926 4.650754 ACGTCTAGATACATCGCCTTTT 57.349 40.909 0.00 0.00 0.00 2.27
3476 3927 5.961396 ATACGTCTAGATACATCGCCTTT 57.039 39.130 0.00 0.00 0.00 3.11
3477 3928 5.961396 AATACGTCTAGATACATCGCCTT 57.039 39.130 0.00 0.00 0.00 4.35
3478 3929 5.961396 AAATACGTCTAGATACATCGCCT 57.039 39.130 0.00 0.00 0.00 5.52
3479 3930 8.684973 ATTAAAATACGTCTAGATACATCGCC 57.315 34.615 0.00 0.00 0.00 5.54
3525 3976 9.402320 TCCGAAAATACCTATCATCAAAATGAA 57.598 29.630 0.00 0.00 44.85 2.57
3526 3977 8.836413 GTCCGAAAATACCTATCATCAAAATGA 58.164 33.333 0.00 0.00 45.73 2.57
3527 3978 7.798516 CGTCCGAAAATACCTATCATCAAAATG 59.201 37.037 0.00 0.00 0.00 2.32
3528 3979 7.041372 CCGTCCGAAAATACCTATCATCAAAAT 60.041 37.037 0.00 0.00 0.00 1.82
3529 3980 6.259167 CCGTCCGAAAATACCTATCATCAAAA 59.741 38.462 0.00 0.00 0.00 2.44
3530 3981 5.756347 CCGTCCGAAAATACCTATCATCAAA 59.244 40.000 0.00 0.00 0.00 2.69
3531 3982 5.069383 TCCGTCCGAAAATACCTATCATCAA 59.931 40.000 0.00 0.00 0.00 2.57
3532 3983 4.585581 TCCGTCCGAAAATACCTATCATCA 59.414 41.667 0.00 0.00 0.00 3.07
3533 3984 5.130292 TCCGTCCGAAAATACCTATCATC 57.870 43.478 0.00 0.00 0.00 2.92
3534 3985 4.021368 CCTCCGTCCGAAAATACCTATCAT 60.021 45.833 0.00 0.00 0.00 2.45
3535 3986 3.319972 CCTCCGTCCGAAAATACCTATCA 59.680 47.826 0.00 0.00 0.00 2.15
3536 3987 3.305881 CCCTCCGTCCGAAAATACCTATC 60.306 52.174 0.00 0.00 0.00 2.08
3537 3988 2.631545 CCCTCCGTCCGAAAATACCTAT 59.368 50.000 0.00 0.00 0.00 2.57
3538 3989 2.034124 CCCTCCGTCCGAAAATACCTA 58.966 52.381 0.00 0.00 0.00 3.08
3539 3990 0.828677 CCCTCCGTCCGAAAATACCT 59.171 55.000 0.00 0.00 0.00 3.08
3540 3991 0.826062 TCCCTCCGTCCGAAAATACC 59.174 55.000 0.00 0.00 0.00 2.73
3541 3992 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
3542 3993 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
3543 3994 1.755380 CTACTCCCTCCGTCCGAAAAT 59.245 52.381 0.00 0.00 0.00 1.82
3544 3995 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
3545 3996 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
3546 3997 0.911769 TACTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
3547 3998 0.911769 TTACTACTCCCTCCGTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
3548 3999 1.403323 GTTTACTACTCCCTCCGTCCG 59.597 57.143 0.00 0.00 0.00 4.79
3549 4000 2.165234 GTGTTTACTACTCCCTCCGTCC 59.835 54.545 0.00 0.00 0.00 4.79
3550 4001 2.165234 GGTGTTTACTACTCCCTCCGTC 59.835 54.545 0.00 0.00 34.91 4.79
3551 4002 2.174360 GGTGTTTACTACTCCCTCCGT 58.826 52.381 0.00 0.00 34.91 4.69
3552 4003 2.454538 AGGTGTTTACTACTCCCTCCG 58.545 52.381 0.00 0.00 40.56 4.63
3553 4004 4.904895 AAAGGTGTTTACTACTCCCTCC 57.095 45.455 0.00 0.00 40.56 4.30
3554 4005 9.948964 TTAATTAAAGGTGTTTACTACTCCCTC 57.051 33.333 0.00 0.00 40.56 4.30
3555 4006 9.730705 GTTAATTAAAGGTGTTTACTACTCCCT 57.269 33.333 0.00 0.00 40.56 4.20
3556 4007 8.950210 GGTTAATTAAAGGTGTTTACTACTCCC 58.050 37.037 0.00 0.00 40.56 4.30
3557 4008 9.730705 AGGTTAATTAAAGGTGTTTACTACTCC 57.269 33.333 0.00 0.00 40.08 3.85
3559 4010 9.006839 GCAGGTTAATTAAAGGTGTTTACTACT 57.993 33.333 0.00 0.00 0.00 2.57
3560 4011 8.785946 TGCAGGTTAATTAAAGGTGTTTACTAC 58.214 33.333 0.00 0.00 0.00 2.73
3561 4012 8.921353 TGCAGGTTAATTAAAGGTGTTTACTA 57.079 30.769 0.00 0.00 0.00 1.82
3562 4013 7.826918 TGCAGGTTAATTAAAGGTGTTTACT 57.173 32.000 0.00 0.00 0.00 2.24
3630 4081 4.237724 CACTTAAGACTGTTCTCATCGCA 58.762 43.478 10.09 0.00 0.00 5.10
3672 4123 3.316573 AAGCAGAGTAGCGGGCCAC 62.317 63.158 4.39 0.00 40.15 5.01
3780 4273 3.074412 AGTGTTCCTGGATTTAAGTGCG 58.926 45.455 0.00 0.00 0.00 5.34
3791 4284 2.736144 TAGCGTGTTAGTGTTCCTGG 57.264 50.000 0.00 0.00 0.00 4.45
3853 4346 5.828299 TGAGTAATGAATAAAAAGGCGGG 57.172 39.130 0.00 0.00 0.00 6.13
3855 4348 7.639039 TGCTATGAGTAATGAATAAAAAGGCG 58.361 34.615 0.00 0.00 0.00 5.52
3902 4395 9.401058 CCTTATCTGATCTGAAAGGTTACAAAT 57.599 33.333 21.82 3.67 33.50 2.32
3903 4396 7.336931 GCCTTATCTGATCTGAAAGGTTACAAA 59.663 37.037 25.91 7.68 39.15 2.83
3904 4397 6.823689 GCCTTATCTGATCTGAAAGGTTACAA 59.176 38.462 25.91 8.12 39.15 2.41
3910 4405 4.387598 CCTGCCTTATCTGATCTGAAAGG 58.612 47.826 23.76 23.76 39.78 3.11
3985 4480 1.419381 TACAGTGAGTTGCAGGTGGA 58.581 50.000 0.00 0.00 0.00 4.02
4000 4495 3.775202 AGACTAACTGCGCTGAATACAG 58.225 45.455 21.92 3.99 45.91 2.74
4002 4497 4.035278 AGAGACTAACTGCGCTGAATAC 57.965 45.455 21.92 7.97 0.00 1.89
4007 4502 2.575694 ATGAGAGACTAACTGCGCTG 57.424 50.000 13.23 13.23 0.00 5.18
4020 4515 7.775093 TGTCAGGTGGGAAAAATAATATGAGAG 59.225 37.037 0.00 0.00 0.00 3.20
4026 4521 4.944930 CGGTGTCAGGTGGGAAAAATAATA 59.055 41.667 0.00 0.00 0.00 0.98
4040 4535 0.107654 GGGAGGATTTCGGTGTCAGG 60.108 60.000 0.00 0.00 0.00 3.86
4092 4588 0.645355 ACTTGAATATGACACGCGCG 59.355 50.000 30.96 30.96 0.00 6.86
4116 4612 3.417690 CTTGATAAAGCAAGCTCCTGC 57.582 47.619 1.95 1.95 42.97 4.85
4172 4668 4.352039 ACTGCGACGAACTTGTATAGATG 58.648 43.478 0.00 0.00 0.00 2.90
4226 4722 1.569479 GCACAACCCTCTCGACAAGC 61.569 60.000 0.00 0.00 0.00 4.01
4277 4773 3.077556 CTAGCAGGCTCCCACCGT 61.078 66.667 0.00 0.00 33.69 4.83
4311 4807 6.614160 CACATCATAATGTTTCTGCTCACAA 58.386 36.000 0.00 0.00 43.74 3.33
4314 4810 4.701171 TGCACATCATAATGTTTCTGCTCA 59.299 37.500 0.00 0.00 43.74 4.26
4359 4860 2.223782 TGTGGCAAGTTTTCACATGCTC 60.224 45.455 2.93 0.00 38.79 4.26
4365 4866 6.474364 GTGTAAAATTGTGGCAAGTTTTCAC 58.526 36.000 19.78 19.78 0.00 3.18
4367 4868 5.517054 TCGTGTAAAATTGTGGCAAGTTTTC 59.483 36.000 11.51 8.07 0.00 2.29
4372 4873 3.958704 TGTCGTGTAAAATTGTGGCAAG 58.041 40.909 0.00 0.00 0.00 4.01
4386 4887 0.800631 CATCTGCAGCAATGTCGTGT 59.199 50.000 9.47 0.00 0.00 4.49
4387 4888 0.098200 CCATCTGCAGCAATGTCGTG 59.902 55.000 9.47 0.00 0.00 4.35
4388 4889 0.321919 ACCATCTGCAGCAATGTCGT 60.322 50.000 9.47 0.38 0.00 4.34
4389 4890 0.806868 AACCATCTGCAGCAATGTCG 59.193 50.000 9.47 0.00 0.00 4.35
4493 4996 1.144936 GCTGGAGAGCGCCAACTAT 59.855 57.895 2.29 0.00 37.52 2.12
4526 5029 4.141287 TCTGTCACCAACCATCGAATTTT 58.859 39.130 0.00 0.00 0.00 1.82
4541 5044 4.196971 ACCCTAAACTGTTGTTCTGTCAC 58.803 43.478 0.00 0.00 34.96 3.67
4702 5205 5.381757 AGTCATGTAACAAGGCTACCAAAA 58.618 37.500 0.00 0.00 0.00 2.44
4707 5210 5.725362 AGAGAAGTCATGTAACAAGGCTAC 58.275 41.667 0.00 0.00 0.00 3.58
4739 5242 0.739561 ATTCGAGTAGAGGCGGTCAC 59.260 55.000 0.00 0.00 0.00 3.67
4757 5260 7.759489 TGTAACAAGGCTGACAGATTAAAAT 57.241 32.000 6.65 0.00 0.00 1.82
4765 5268 4.997395 ACAGTTATGTAACAAGGCTGACAG 59.003 41.667 0.00 0.00 38.09 3.51
4823 5326 1.874019 CGAAGAGTGGCCATCGACG 60.874 63.158 19.41 17.00 37.48 5.12
4869 5372 6.062095 AGTATGTGTTTAGTTCAAGGTGCTT 58.938 36.000 0.00 0.00 0.00 3.91
4877 5380 8.362464 AGACAGGATAGTATGTGTTTAGTTCA 57.638 34.615 0.00 0.00 0.00 3.18
4889 5392 3.498334 GGGGACGAAGACAGGATAGTAT 58.502 50.000 0.00 0.00 0.00 2.12
4919 5422 1.084289 CCCGTTACTTGCTAACTGCC 58.916 55.000 0.00 0.00 42.00 4.85
4975 5478 3.669122 ACTTCATTTTCGTCGAACTCTCG 59.331 43.478 7.29 0.00 46.87 4.04
4976 5479 4.444720 ACACTTCATTTTCGTCGAACTCTC 59.555 41.667 7.29 0.00 0.00 3.20
4979 5482 4.710528 GACACTTCATTTTCGTCGAACT 57.289 40.909 7.29 0.00 0.00 3.01
5003 5506 8.365938 CGCGTTATGTTCTATATGTACAGAATG 58.634 37.037 0.33 0.00 46.00 2.67
5012 5515 3.239254 TCGCCGCGTTATGTTCTATATG 58.761 45.455 13.39 0.00 0.00 1.78
5015 5518 1.767289 CTCGCCGCGTTATGTTCTAT 58.233 50.000 13.39 0.00 0.00 1.98
5021 5524 1.977594 AAAAGGCTCGCCGCGTTATG 61.978 55.000 13.39 3.34 45.21 1.90
5022 5525 1.743995 AAAAGGCTCGCCGCGTTAT 60.744 52.632 13.39 0.00 45.21 1.89
5023 5526 2.357760 AAAAGGCTCGCCGCGTTA 60.358 55.556 13.39 0.00 45.21 3.18
5044 5547 0.802222 TCGACTGAGCGCTTGCATAC 60.802 55.000 13.26 0.00 42.66 2.39
5059 5562 1.328439 CGCACTTGTAGTCTGTCGAC 58.672 55.000 9.11 9.11 40.54 4.20
5060 5563 0.386858 GCGCACTTGTAGTCTGTCGA 60.387 55.000 0.30 0.00 0.00 4.20
5062 5565 1.344942 CGGCGCACTTGTAGTCTGTC 61.345 60.000 10.83 0.00 0.00 3.51
5063 5566 1.372997 CGGCGCACTTGTAGTCTGT 60.373 57.895 10.83 0.00 0.00 3.41
5064 5567 1.372997 ACGGCGCACTTGTAGTCTG 60.373 57.895 10.83 0.00 0.00 3.51
5065 5568 1.372997 CACGGCGCACTTGTAGTCT 60.373 57.895 10.83 0.00 0.00 3.24
5066 5569 0.736325 ATCACGGCGCACTTGTAGTC 60.736 55.000 10.83 0.00 0.00 2.59
5067 5570 0.320421 AATCACGGCGCACTTGTAGT 60.320 50.000 10.83 0.00 0.00 2.73
5068 5571 0.095245 CAATCACGGCGCACTTGTAG 59.905 55.000 10.83 0.00 0.00 2.74
5070 5573 2.945984 CAATCACGGCGCACTTGT 59.054 55.556 10.83 0.00 0.00 3.16
5072 5575 3.737172 GGCAATCACGGCGCACTT 61.737 61.111 10.83 0.00 0.00 3.16
5073 5576 4.704833 AGGCAATCACGGCGCACT 62.705 61.111 10.83 0.00 36.37 4.40
5077 5580 2.787249 CAAGAGGCAATCACGGCG 59.213 61.111 4.80 4.80 36.37 6.46
5088 5591 5.862845 ACCTATCTGATGTAATGCAAGAGG 58.137 41.667 0.00 0.00 0.00 3.69
5109 5612 7.014808 AGCTACTAGATCTAGATGAAACCAACC 59.985 40.741 31.91 10.90 36.97 3.77
5114 5617 9.162764 CTCCTAGCTACTAGATCTAGATGAAAC 57.837 40.741 31.91 16.00 36.26 2.78
5116 5619 7.092623 CCCTCCTAGCTACTAGATCTAGATGAA 60.093 44.444 31.91 15.03 36.26 2.57
5120 5623 5.667777 ACCCTCCTAGCTACTAGATCTAGA 58.332 45.833 31.91 16.48 36.26 2.43
5125 5628 3.267551 GCCTACCCTCCTAGCTACTAGAT 59.732 52.174 0.00 0.00 36.26 1.98
5126 5629 2.643801 GCCTACCCTCCTAGCTACTAGA 59.356 54.545 0.00 0.00 36.26 2.43
5127 5630 2.291089 GGCCTACCCTCCTAGCTACTAG 60.291 59.091 0.00 0.00 34.16 2.57
5128 5631 1.709679 GGCCTACCCTCCTAGCTACTA 59.290 57.143 0.00 0.00 0.00 1.82
5129 5632 0.483770 GGCCTACCCTCCTAGCTACT 59.516 60.000 0.00 0.00 0.00 2.57
5130 5633 0.483770 AGGCCTACCCTCCTAGCTAC 59.516 60.000 1.29 0.00 41.21 3.58
5132 5635 0.781278 CTAGGCCTACCCTCCTAGCT 59.219 60.000 8.91 0.00 44.96 3.32
5133 5636 3.367288 CTAGGCCTACCCTCCTAGC 57.633 63.158 8.91 0.00 44.96 3.42
5135 5638 3.333082 GTCATACTAGGCCTACCCTCCTA 59.667 52.174 8.91 0.00 44.96 2.94
5136 5639 2.110365 GTCATACTAGGCCTACCCTCCT 59.890 54.545 8.91 0.00 44.96 3.69
5157 5663 7.361127 AGAGTTGATAGTTCGATAACGGTATG 58.639 38.462 0.00 0.00 40.73 2.39
5160 5666 5.221009 GGAGAGTTGATAGTTCGATAACGGT 60.221 44.000 0.00 0.00 40.73 4.83
5169 5675 2.930682 GCGGTTGGAGAGTTGATAGTTC 59.069 50.000 0.00 0.00 0.00 3.01
5172 5678 2.672961 TGCGGTTGGAGAGTTGATAG 57.327 50.000 0.00 0.00 0.00 2.08
5199 5705 6.584954 GCGTTGCTGTTGTTATAGATAGATG 58.415 40.000 0.00 0.00 0.00 2.90
5203 5709 4.426416 ACGCGTTGCTGTTGTTATAGATA 58.574 39.130 5.58 0.00 0.00 1.98
5244 5750 2.968330 TTTCGTTTTTGTCGCCGCCG 62.968 55.000 0.00 0.00 0.00 6.46
5245 5751 0.662077 ATTTCGTTTTTGTCGCCGCC 60.662 50.000 0.00 0.00 0.00 6.13
5277 5783 3.531538 TGTCATGGAAGATTCTTACGGC 58.468 45.455 4.20 0.00 0.00 5.68
5332 5846 2.030946 GCGATGACCAAGATTGTACTGC 59.969 50.000 0.00 0.00 0.00 4.40
5333 5847 2.609459 GGCGATGACCAAGATTGTACTG 59.391 50.000 0.00 0.00 0.00 2.74
5334 5848 2.236146 TGGCGATGACCAAGATTGTACT 59.764 45.455 0.00 0.00 36.55 2.73
5335 5849 2.351726 GTGGCGATGACCAAGATTGTAC 59.648 50.000 0.00 0.00 42.70 2.90
5336 5850 2.627945 GTGGCGATGACCAAGATTGTA 58.372 47.619 0.00 0.00 42.70 2.41
5337 5851 1.453155 GTGGCGATGACCAAGATTGT 58.547 50.000 0.00 0.00 42.70 2.71
5352 5866 1.866853 GCACAAGTTAGGCAGGTGGC 61.867 60.000 0.00 0.00 43.74 5.01
5379 5893 2.663826 AGATGACTCGTTTGAGAGGC 57.336 50.000 0.00 0.00 45.57 4.70
5390 5904 9.209175 AGAACATTTTGTGTAGTAAGATGACTC 57.791 33.333 0.00 0.00 41.14 3.36
5402 5916 2.645163 CGCGCAAGAACATTTTGTGTA 58.355 42.857 8.75 0.00 38.68 2.90
5413 5927 1.082169 GATGTGTTGCGCGCAAGAA 60.082 52.632 43.69 31.90 41.37 2.52
5414 5928 2.173951 CTGATGTGTTGCGCGCAAGA 62.174 55.000 43.69 39.78 41.37 3.02
5415 5929 1.794785 CTGATGTGTTGCGCGCAAG 60.795 57.895 43.69 27.58 41.37 4.01
5416 5930 2.251963 CTGATGTGTTGCGCGCAA 59.748 55.556 40.23 40.23 41.37 4.85
5419 5933 0.026674 CATACCTGATGTGTTGCGCG 59.973 55.000 0.00 0.00 0.00 6.86
5420 5934 3.903876 CATACCTGATGTGTTGCGC 57.096 52.632 0.00 0.00 0.00 6.09
5428 5942 2.502213 TAACCGCGACATACCTGATG 57.498 50.000 8.23 0.00 41.79 3.07
5429 5943 2.626266 TGATAACCGCGACATACCTGAT 59.374 45.455 8.23 0.00 0.00 2.90
5430 5944 2.025898 TGATAACCGCGACATACCTGA 58.974 47.619 8.23 0.00 0.00 3.86
5432 5946 1.752498 TGTGATAACCGCGACATACCT 59.248 47.619 8.23 0.00 0.00 3.08
5436 5950 3.990092 ACATATGTGATAACCGCGACAT 58.010 40.909 8.23 11.10 33.64 3.06
5437 5951 3.446310 ACATATGTGATAACCGCGACA 57.554 42.857 8.23 2.28 0.00 4.35
5438 5952 5.631929 TGAATACATATGTGATAACCGCGAC 59.368 40.000 18.81 0.00 0.00 5.19
5439 5953 5.631929 GTGAATACATATGTGATAACCGCGA 59.368 40.000 18.81 0.00 0.00 5.87
5440 5954 5.633601 AGTGAATACATATGTGATAACCGCG 59.366 40.000 18.81 0.00 0.00 6.46
5441 5955 7.201444 GCTAGTGAATACATATGTGATAACCGC 60.201 40.741 18.81 11.00 0.00 5.68
5442 5956 7.275779 GGCTAGTGAATACATATGTGATAACCG 59.724 40.741 18.81 5.89 0.00 4.44
5444 5958 9.658799 ATGGCTAGTGAATACATATGTGATAAC 57.341 33.333 18.81 9.86 0.00 1.89
5445 5959 9.875691 GATGGCTAGTGAATACATATGTGATAA 57.124 33.333 18.81 0.00 0.00 1.75
5446 5960 8.190784 CGATGGCTAGTGAATACATATGTGATA 58.809 37.037 18.81 0.00 0.00 2.15
5449 5963 5.578336 CCGATGGCTAGTGAATACATATGTG 59.422 44.000 18.81 0.00 0.00 3.21
5450 5964 5.246203 ACCGATGGCTAGTGAATACATATGT 59.754 40.000 13.93 13.93 0.00 2.29
5452 5966 6.360370 AACCGATGGCTAGTGAATACATAT 57.640 37.500 0.00 0.00 0.00 1.78
5469 6213 4.741342 AGACTATTTTTCGACGAACCGAT 58.259 39.130 10.38 7.20 38.45 4.18
5471 6215 3.302699 GGAGACTATTTTTCGACGAACCG 59.697 47.826 10.38 0.00 0.00 4.44
5493 6237 7.093902 TGGTTCTAGTGTTGTAATCTAGGACAG 60.094 40.741 10.65 0.00 40.25 3.51
5494 6238 6.722590 TGGTTCTAGTGTTGTAATCTAGGACA 59.277 38.462 10.65 0.00 40.25 4.02
5495 6239 7.166691 TGGTTCTAGTGTTGTAATCTAGGAC 57.833 40.000 0.00 0.00 38.72 3.85
5496 6240 7.973048 ATGGTTCTAGTGTTGTAATCTAGGA 57.027 36.000 0.00 0.00 33.96 2.94
5561 6318 4.386049 GTGAAGTAAACTGTGATGTCCGAG 59.614 45.833 0.00 0.00 0.00 4.63
5579 6336 2.749621 GCCTGATGTACCCAAAGTGAAG 59.250 50.000 0.00 0.00 0.00 3.02
5580 6337 2.790433 GCCTGATGTACCCAAAGTGAA 58.210 47.619 0.00 0.00 0.00 3.18
5581 6338 1.338674 CGCCTGATGTACCCAAAGTGA 60.339 52.381 0.00 0.00 0.00 3.41
5582 6339 1.086696 CGCCTGATGTACCCAAAGTG 58.913 55.000 0.00 0.00 0.00 3.16
5583 6340 0.981183 TCGCCTGATGTACCCAAAGT 59.019 50.000 0.00 0.00 0.00 2.66
5584 6341 2.107950 TTCGCCTGATGTACCCAAAG 57.892 50.000 0.00 0.00 0.00 2.77
5588 6345 0.387929 TCGATTCGCCTGATGTACCC 59.612 55.000 0.00 0.00 0.00 3.69
5622 6379 6.205853 TGCATGTGTACCGAAAACTATTTCTT 59.794 34.615 0.00 0.00 42.29 2.52
5623 6380 5.703592 TGCATGTGTACCGAAAACTATTTCT 59.296 36.000 0.00 0.00 42.29 2.52
5624 6381 5.933790 TGCATGTGTACCGAAAACTATTTC 58.066 37.500 0.00 0.00 41.27 2.17
5658 6415 0.031313 TGTGGGGGCATGGCAATATT 60.031 50.000 22.06 0.00 0.00 1.28
5752 6509 4.247267 TCGTTCAACTGTAGTGGTAAGG 57.753 45.455 0.00 0.00 0.00 2.69
5758 6515 4.473199 TCGATCTTCGTTCAACTGTAGTG 58.527 43.478 0.00 0.00 41.35 2.74
5772 6529 0.567968 CGCACACACGATCGATCTTC 59.432 55.000 24.34 5.13 34.06 2.87
5773 6530 1.413767 GCGCACACACGATCGATCTT 61.414 55.000 24.34 11.34 34.06 2.40
5795 6552 1.742761 TGGTAGTCGACGTTAGGAGG 58.257 55.000 10.46 0.00 0.00 4.30
5831 6588 8.589335 TCCGCTTTTGTATAGACTAATCAATC 57.411 34.615 4.37 0.00 0.00 2.67
5853 6610 5.637006 TTCTTTTGGGTCATATGTTTCCG 57.363 39.130 1.90 0.00 0.00 4.30
5869 6626 9.034544 CGAAATGGAAGTTTTTGAGATTCTTTT 57.965 29.630 0.00 0.00 0.00 2.27
5889 6646 5.571741 TCGTTTCTACAAGAGTAGCGAAATG 59.428 40.000 0.00 0.00 45.90 2.32
5890 6647 5.572126 GTCGTTTCTACAAGAGTAGCGAAAT 59.428 40.000 0.00 0.00 45.90 2.17
5893 6650 3.424039 CGTCGTTTCTACAAGAGTAGCGA 60.424 47.826 0.00 0.00 45.90 4.93
5894 6651 2.839026 CGTCGTTTCTACAAGAGTAGCG 59.161 50.000 0.00 0.00 45.90 4.26
5895 6652 3.602915 CACGTCGTTTCTACAAGAGTAGC 59.397 47.826 0.00 0.00 45.90 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.