Multiple sequence alignment - TraesCS4B01G388000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G388000 chr4B 100.000 3356 0 0 1 3356 665422741 665419386 0.000000e+00 6198.0
1 TraesCS4B01G388000 chr4B 95.342 1653 69 3 1054 2705 665467860 665466215 0.000000e+00 2619.0
2 TraesCS4B01G388000 chr4B 92.885 1265 66 5 1450 2705 625623847 625622598 0.000000e+00 1816.0
3 TraesCS4B01G388000 chr4B 83.661 1273 190 14 1118 2379 665919818 665921083 0.000000e+00 1182.0
4 TraesCS4B01G388000 chr4B 91.169 419 26 4 377 784 665475429 665475011 2.920000e-155 558.0
5 TraesCS4B01G388000 chr4B 93.077 130 9 0 134 263 665476235 665476106 1.230000e-44 191.0
6 TraesCS4B01G388000 chr4B 94.845 97 5 0 962 1058 665473411 665473315 5.800000e-33 152.0
7 TraesCS4B01G388000 chr4B 80.114 176 11 7 963 1123 625627195 625627029 3.540000e-20 110.0
8 TraesCS4B01G388000 chr4B 89.706 68 7 0 2863 2930 412207454 412207521 1.660000e-13 87.9
9 TraesCS4B01G388000 chr4B 97.917 48 1 0 785 832 665473492 665473445 2.150000e-12 84.2
10 TraesCS4B01G388000 chrUn 93.019 1762 99 10 962 2705 108430100 108431855 0.000000e+00 2551.0
11 TraesCS4B01G388000 chrUn 84.403 1231 179 12 1154 2376 108305103 108303878 0.000000e+00 1197.0
12 TraesCS4B01G388000 chrUn 93.653 709 35 6 134 836 108429373 108430077 0.000000e+00 1051.0
13 TraesCS4B01G388000 chrUn 77.787 1238 209 45 1158 2370 108255052 108256248 0.000000e+00 702.0
14 TraesCS4B01G388000 chrUn 86.301 292 32 4 1158 1445 134300072 134299785 9.040000e-81 311.0
15 TraesCS4B01G388000 chrUn 75.993 604 88 24 1728 2319 134261852 134261294 3.320000e-65 259.0
16 TraesCS4B01G388000 chrUn 94.444 162 8 1 2706 2866 108432658 108432819 7.190000e-62 248.0
17 TraesCS4B01G388000 chrUn 88.742 151 13 4 1 147 108429197 108429347 7.400000e-42 182.0
18 TraesCS4B01G388000 chrUn 76.923 117 22 4 2865 2979 276512854 276512967 1.010000e-05 62.1
19 TraesCS4B01G388000 chr5A 80.818 1272 199 22 1118 2371 705943849 705945093 0.000000e+00 955.0
20 TraesCS4B01G388000 chr5A 85.210 595 78 9 1154 1743 706066644 706066055 1.330000e-168 603.0
21 TraesCS4B01G388000 chr5A 77.886 719 123 18 1158 1873 705954761 705954076 6.700000e-112 414.0
22 TraesCS4B01G388000 chr5A 99.048 105 1 0 837 941 531614683 531614579 4.420000e-44 189.0
23 TraesCS4B01G388000 chr5A 85.401 137 15 5 2238 2372 706066046 706065913 1.620000e-28 137.0
24 TraesCS4B01G388000 chr7B 98.798 499 5 1 2858 3356 38662443 38661946 0.000000e+00 887.0
25 TraesCS4B01G388000 chr7B 98.984 492 3 2 2865 3356 115230218 115230707 0.000000e+00 880.0
26 TraesCS4B01G388000 chr6A 95.736 469 8 3 2864 3322 105607279 105606813 0.000000e+00 745.0
27 TraesCS4B01G388000 chr6A 75.424 944 176 34 1158 2085 610477887 610476984 1.120000e-109 407.0
28 TraesCS4B01G388000 chr4A 77.699 1269 242 30 1117 2372 738743315 738742075 0.000000e+00 737.0
29 TraesCS4B01G388000 chr4A 99.074 108 1 0 837 944 691127010 691126903 9.500000e-46 195.0
30 TraesCS4B01G388000 chr1A 93.795 419 13 4 2865 3272 75735832 75735416 4.760000e-173 617.0
31 TraesCS4B01G388000 chr1A 97.345 113 1 2 832 942 558592070 558592182 1.230000e-44 191.0
32 TraesCS4B01G388000 chr1A 99.048 105 1 0 837 941 385269216 385269112 4.420000e-44 189.0
33 TraesCS4B01G388000 chr1A 78.814 118 18 5 2865 2979 564147573 564147686 4.640000e-09 73.1
34 TraesCS4B01G388000 chr6B 74.559 908 180 30 1158 2056 707307629 707306764 1.920000e-92 350.0
35 TraesCS4B01G388000 chr6B 72.013 636 146 25 1728 2349 716587007 716586390 3.470000e-35 159.0
36 TraesCS4B01G388000 chr7D 82.969 229 33 6 2151 2376 45828654 45828879 5.680000e-48 202.0
37 TraesCS4B01G388000 chr2B 100.000 104 0 0 837 940 577442077 577442180 3.420000e-45 193.0
38 TraesCS4B01G388000 chr2B 99.048 105 1 0 836 940 259029342 259029446 4.420000e-44 189.0
39 TraesCS4B01G388000 chr2B 98.148 108 2 0 837 944 554453498 554453605 4.420000e-44 189.0
40 TraesCS4B01G388000 chr1B 99.057 106 1 0 837 942 583853529 583853424 1.230000e-44 191.0
41 TraesCS4B01G388000 chr5B 98.148 108 2 0 837 944 688104228 688104335 4.420000e-44 189.0
42 TraesCS4B01G388000 chr5B 87.500 64 8 0 2867 2930 93454447 93454510 1.290000e-09 75.0
43 TraesCS4B01G388000 chr2A 76.923 117 22 4 2865 2979 12035668 12035781 1.010000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G388000 chr4B 665419386 665422741 3355 True 6198.0 6198 100.0000 1 3356 1 chr4B.!!$R1 3355
1 TraesCS4B01G388000 chr4B 665466215 665467860 1645 True 2619.0 2619 95.3420 1054 2705 1 chr4B.!!$R2 1651
2 TraesCS4B01G388000 chr4B 665919818 665921083 1265 False 1182.0 1182 83.6610 1118 2379 1 chr4B.!!$F2 1261
3 TraesCS4B01G388000 chr4B 625622598 625627195 4597 True 963.0 1816 86.4995 963 2705 2 chr4B.!!$R3 1742
4 TraesCS4B01G388000 chr4B 665473315 665476235 2920 True 246.3 558 94.2520 134 1058 4 chr4B.!!$R4 924
5 TraesCS4B01G388000 chrUn 108303878 108305103 1225 True 1197.0 1197 84.4030 1154 2376 1 chrUn.!!$R1 1222
6 TraesCS4B01G388000 chrUn 108429197 108432819 3622 False 1008.0 2551 92.4645 1 2866 4 chrUn.!!$F3 2865
7 TraesCS4B01G388000 chrUn 108255052 108256248 1196 False 702.0 702 77.7870 1158 2370 1 chrUn.!!$F1 1212
8 TraesCS4B01G388000 chrUn 134261294 134261852 558 True 259.0 259 75.9930 1728 2319 1 chrUn.!!$R2 591
9 TraesCS4B01G388000 chr5A 705943849 705945093 1244 False 955.0 955 80.8180 1118 2371 1 chr5A.!!$F1 1253
10 TraesCS4B01G388000 chr5A 705954076 705954761 685 True 414.0 414 77.8860 1158 1873 1 chr5A.!!$R2 715
11 TraesCS4B01G388000 chr5A 706065913 706066644 731 True 370.0 603 85.3055 1154 2372 2 chr5A.!!$R3 1218
12 TraesCS4B01G388000 chr6A 610476984 610477887 903 True 407.0 407 75.4240 1158 2085 1 chr6A.!!$R2 927
13 TraesCS4B01G388000 chr4A 738742075 738743315 1240 True 737.0 737 77.6990 1117 2372 1 chr4A.!!$R2 1255
14 TraesCS4B01G388000 chr6B 707306764 707307629 865 True 350.0 350 74.5590 1158 2056 1 chr6B.!!$R1 898

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
831 3008 0.105408 GTGATGGATTTGGGCCATGC 59.895 55.0 7.26 0.0 45.81 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2712 8708 1.401552 GCATATTGAAGGCTGAACGCA 59.598 47.619 0.0 0.0 41.67 5.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 47 4.707030 AATCGTGTGCAATGATTCACAT 57.293 36.364 11.56 0.00 43.94 3.21
55 57 4.097714 CAATGATTCACATTACGGCACAC 58.902 43.478 0.00 0.00 46.01 3.82
60 63 4.576216 TTCACATTACGGCACACATTTT 57.424 36.364 0.00 0.00 0.00 1.82
61 64 5.690997 TTCACATTACGGCACACATTTTA 57.309 34.783 0.00 0.00 0.00 1.52
64 67 6.682746 TCACATTACGGCACACATTTTATTT 58.317 32.000 0.00 0.00 0.00 1.40
75 78 8.449397 GGCACACATTTTATTTATTCAATTGCA 58.551 29.630 0.00 0.00 0.00 4.08
89 92 1.788258 ATTGCATGTCCGATAGAGCG 58.212 50.000 0.00 0.00 39.76 5.03
126 129 7.011763 ACCACACAATGATATGAGAATTCTTCG 59.988 37.037 9.87 0.00 34.02 3.79
129 132 7.225538 ACACAATGATATGAGAATTCTTCGGTC 59.774 37.037 9.87 7.09 34.02 4.79
208 252 2.808523 TCGTTTGCCAATCAATGCAA 57.191 40.000 0.00 0.00 45.12 4.08
243 287 1.134521 TCTTTCTGCCGAACTGTGTGT 60.135 47.619 0.00 0.00 0.00 3.72
280 927 8.686334 ACACAGTTTACATCTCAAAATCTTGTT 58.314 29.630 0.00 0.00 33.94 2.83
300 947 4.021544 TGTTAAAAGGATTGGCCATCACAC 60.022 41.667 6.09 0.00 40.02 3.82
301 948 1.176527 AAAGGATTGGCCATCACACG 58.823 50.000 6.09 0.00 40.02 4.49
330 977 7.201478 CGTTTTGTTTTCTGGCTCACAAATTTA 60.201 33.333 0.00 0.00 38.56 1.40
331 978 8.611757 GTTTTGTTTTCTGGCTCACAAATTTAT 58.388 29.630 0.00 0.00 38.56 1.40
372 1019 0.672889 TGCATCGCACACAATTTGGT 59.327 45.000 0.78 0.00 31.71 3.67
381 1028 2.433970 CACACAATTTGGTCCAAGGGTT 59.566 45.455 4.09 0.00 0.00 4.11
396 1043 4.398044 CCAAGGGTTTGCGATAAGTGTATT 59.602 41.667 0.00 0.00 32.79 1.89
521 1169 9.925268 GCATCCATTTGCAAATAGAAAATAAAG 57.075 29.630 23.69 7.92 42.31 1.85
630 1284 0.743688 TTCGCATTGCCACACTTTGT 59.256 45.000 2.41 0.00 0.00 2.83
721 1380 3.885484 ATCAAGTTGCTCGTGTGAAAG 57.115 42.857 0.00 0.00 0.00 2.62
757 1416 9.485206 AAAATTCATTGAGAAAAGGTCAAGATG 57.515 29.630 0.00 0.00 40.22 2.90
770 1429 5.983540 AGGTCAAGATGGTAGAGATTTCAC 58.016 41.667 0.00 0.00 0.00 3.18
779 1438 1.153429 GAGATTTCACCGGGGGTCG 60.153 63.158 2.42 0.00 31.02 4.79
831 3008 0.105408 GTGATGGATTTGGGCCATGC 59.895 55.000 7.26 0.00 45.81 4.06
832 3009 1.364901 GATGGATTTGGGCCATGCG 59.635 57.895 7.26 0.00 45.81 4.73
833 3010 1.381599 ATGGATTTGGGCCATGCGT 60.382 52.632 7.26 0.00 44.21 5.24
834 3011 1.394266 ATGGATTTGGGCCATGCGTC 61.394 55.000 7.26 3.12 44.21 5.19
835 3012 2.051518 GGATTTGGGCCATGCGTCA 61.052 57.895 7.26 0.00 0.00 4.35
836 3013 1.434696 GATTTGGGCCATGCGTCAG 59.565 57.895 7.26 0.00 0.00 3.51
837 3014 2.008268 GATTTGGGCCATGCGTCAGG 62.008 60.000 7.26 0.00 0.00 3.86
838 3015 2.497792 ATTTGGGCCATGCGTCAGGA 62.498 55.000 7.26 0.00 0.00 3.86
839 3016 3.918253 TTGGGCCATGCGTCAGGAC 62.918 63.158 7.26 0.00 0.00 3.85
849 3026 2.183046 GTCAGGACGCAGCTCCTC 59.817 66.667 9.73 0.00 36.25 3.71
850 3027 2.036414 TCAGGACGCAGCTCCTCT 59.964 61.111 9.73 0.00 36.25 3.69
851 3028 2.183811 CAGGACGCAGCTCCTCTG 59.816 66.667 9.73 0.25 45.62 3.35
852 3029 2.036414 AGGACGCAGCTCCTCTGA 59.964 61.111 7.42 0.00 45.72 3.27
853 3030 2.183046 GGACGCAGCTCCTCTGAC 59.817 66.667 4.17 0.00 45.72 3.51
854 3031 2.202544 GACGCAGCTCCTCTGACG 60.203 66.667 0.00 2.37 45.72 4.35
855 3032 2.986413 ACGCAGCTCCTCTGACGT 60.986 61.111 0.00 0.00 45.72 4.34
856 3033 1.645704 GACGCAGCTCCTCTGACGTA 61.646 60.000 11.86 0.00 46.96 3.57
857 3034 1.226435 CGCAGCTCCTCTGACGTAC 60.226 63.158 0.00 0.00 45.72 3.67
858 3035 1.226435 GCAGCTCCTCTGACGTACG 60.226 63.158 15.01 15.01 45.72 3.67
859 3036 1.429825 CAGCTCCTCTGACGTACGG 59.570 63.158 21.06 1.50 45.72 4.02
860 3037 2.102553 GCTCCTCTGACGTACGGC 59.897 66.667 21.06 18.72 0.00 5.68
862 3039 3.736482 CTCCTCTGACGTACGGCGC 62.736 68.421 21.06 0.00 46.11 6.53
863 3040 4.111016 CCTCTGACGTACGGCGCA 62.111 66.667 21.06 13.22 46.11 6.09
864 3041 2.874780 CTCTGACGTACGGCGCAC 60.875 66.667 21.06 2.50 46.11 5.34
865 3042 3.324099 CTCTGACGTACGGCGCACT 62.324 63.158 21.06 0.00 46.11 4.40
866 3043 2.874780 CTGACGTACGGCGCACTC 60.875 66.667 21.06 7.29 46.11 3.51
867 3044 4.746951 TGACGTACGGCGCACTCG 62.747 66.667 21.06 6.32 46.11 4.18
880 3057 3.366629 ACTCGCTGACGTGTGGAT 58.633 55.556 0.00 0.00 43.76 3.41
881 3058 1.213013 ACTCGCTGACGTGTGGATC 59.787 57.895 0.00 0.00 43.76 3.36
882 3059 1.517257 CTCGCTGACGTGTGGATCC 60.517 63.158 4.20 4.20 41.18 3.36
883 3060 2.880879 CGCTGACGTGTGGATCCG 60.881 66.667 7.39 0.00 33.53 4.18
884 3061 2.509336 GCTGACGTGTGGATCCGG 60.509 66.667 7.39 0.00 0.00 5.14
885 3062 3.001902 GCTGACGTGTGGATCCGGA 62.002 63.158 6.61 6.61 0.00 5.14
886 3063 1.153823 CTGACGTGTGGATCCGGAC 60.154 63.158 6.12 5.06 0.00 4.79
887 3064 2.183555 GACGTGTGGATCCGGACC 59.816 66.667 6.12 11.46 0.00 4.46
888 3065 3.366739 GACGTGTGGATCCGGACCC 62.367 68.421 8.42 8.42 0.00 4.46
889 3066 3.387091 CGTGTGGATCCGGACCCA 61.387 66.667 15.87 15.87 0.00 4.51
892 3069 4.832608 GTGGATCCGGACCCACGC 62.833 72.222 32.42 11.41 42.73 5.34
895 3072 4.867599 GATCCGGACCCACGCGTC 62.868 72.222 9.86 0.00 0.00 5.19
909 3086 3.041940 CGTCAGTGGCCCAACGTC 61.042 66.667 0.00 0.00 0.00 4.34
910 3087 2.110213 GTCAGTGGCCCAACGTCA 59.890 61.111 0.00 0.00 0.00 4.35
911 3088 1.961277 GTCAGTGGCCCAACGTCAG 60.961 63.158 0.00 0.00 0.00 3.51
912 3089 2.669569 CAGTGGCCCAACGTCAGG 60.670 66.667 0.00 0.00 0.00 3.86
913 3090 3.168528 AGTGGCCCAACGTCAGGT 61.169 61.111 0.00 0.00 0.00 4.00
914 3091 2.978010 GTGGCCCAACGTCAGGTG 60.978 66.667 0.00 0.00 34.07 4.00
920 3097 2.340809 CAACGTCAGGTGGCCGTA 59.659 61.111 0.00 0.00 33.88 4.02
921 3098 2.025418 CAACGTCAGGTGGCCGTAC 61.025 63.158 0.00 0.00 33.88 3.67
922 3099 3.562779 AACGTCAGGTGGCCGTACG 62.563 63.158 8.69 8.69 40.48 3.67
923 3100 4.047059 CGTCAGGTGGCCGTACGT 62.047 66.667 15.21 0.00 33.91 3.57
924 3101 2.126189 GTCAGGTGGCCGTACGTC 60.126 66.667 15.21 0.00 0.00 4.34
925 3102 2.598099 TCAGGTGGCCGTACGTCA 60.598 61.111 15.21 9.40 0.00 4.35
926 3103 2.126071 CAGGTGGCCGTACGTCAG 60.126 66.667 15.21 0.00 0.00 3.51
927 3104 3.379445 AGGTGGCCGTACGTCAGG 61.379 66.667 15.21 0.00 0.00 3.86
928 3105 4.446413 GGTGGCCGTACGTCAGGG 62.446 72.222 15.21 0.00 35.13 4.45
929 3106 4.446413 GTGGCCGTACGTCAGGGG 62.446 72.222 15.21 0.00 32.45 4.79
930 3107 4.682334 TGGCCGTACGTCAGGGGA 62.682 66.667 15.21 0.00 32.45 4.81
931 3108 3.152400 GGCCGTACGTCAGGGGAT 61.152 66.667 15.21 0.00 32.45 3.85
932 3109 2.416260 GCCGTACGTCAGGGGATC 59.584 66.667 15.21 0.00 32.45 3.36
933 3110 3.126528 CCGTACGTCAGGGGATCC 58.873 66.667 15.21 1.92 0.00 3.36
934 3111 2.719979 CGTACGTCAGGGGATCCG 59.280 66.667 7.22 0.00 38.33 4.18
935 3112 2.842256 CGTACGTCAGGGGATCCGG 61.842 68.421 7.22 0.00 38.33 5.14
936 3113 2.836360 TACGTCAGGGGATCCGGC 60.836 66.667 5.45 0.00 38.33 6.13
937 3114 3.369410 TACGTCAGGGGATCCGGCT 62.369 63.158 5.45 0.00 38.33 5.52
938 3115 3.917760 CGTCAGGGGATCCGGCTC 61.918 72.222 5.45 0.00 38.33 4.70
978 3176 1.771255 GTGGCCTGACCTAGAATCCAT 59.229 52.381 3.32 0.00 40.22 3.41
1087 3313 1.600916 ACCACCAGAGCGAAAAGGC 60.601 57.895 0.00 0.00 0.00 4.35
1088 3314 1.600636 CCACCAGAGCGAAAAGGCA 60.601 57.895 0.00 0.00 34.64 4.75
1103 3332 0.607489 AGGCACAACACCATCTCTGC 60.607 55.000 0.00 0.00 0.00 4.26
1212 4613 0.472898 TCGAGATCTTCCTCCGCCTA 59.527 55.000 0.00 0.00 0.00 3.93
1375 6499 2.772924 CCACCCCCTCCTTTGCAT 59.227 61.111 0.00 0.00 0.00 3.96
1445 6569 2.158081 ACTTCTTCCTCACCTTCCTCCT 60.158 50.000 0.00 0.00 0.00 3.69
1559 6707 1.746615 CTGCCGTGAACCCCATGAG 60.747 63.158 0.00 0.00 33.60 2.90
1651 6805 1.133482 CCTTCCTTGGTTTCCACCTGT 60.133 52.381 0.00 0.00 44.61 4.00
1690 6844 4.452733 CCTCCTTCCGCGTGGTCC 62.453 72.222 16.01 0.00 36.30 4.46
1726 6880 1.597027 CAAAGGGTTCGTGTCGCCT 60.597 57.895 0.00 0.00 0.00 5.52
2007 7171 3.861840 TGACGATTTCCTCCTTCATGTC 58.138 45.455 0.00 0.00 0.00 3.06
2050 7217 4.676109 TGATGGAATTGAGATTTGGGTGT 58.324 39.130 0.00 0.00 0.00 4.16
2222 7401 2.784347 CTGGTTCTTCTCCCTTTCACC 58.216 52.381 0.00 0.00 0.00 4.02
2330 7512 1.565288 TGGTGATGATGGGAGCATTGA 59.435 47.619 0.00 0.00 0.00 2.57
2477 7662 9.573133 CAAAAATGTAACCTTTAGATGCCTTAG 57.427 33.333 0.00 0.00 0.00 2.18
2510 7695 3.647590 ACAATTCTGGGCCAATGAAGTTT 59.352 39.130 8.04 0.00 0.00 2.66
2708 8704 8.877864 AAATTTACTGTTCATCCCAGTGATTA 57.122 30.769 3.44 0.00 42.85 1.75
2712 8708 4.018960 ACTGTTCATCCCAGTGATTAAGCT 60.019 41.667 0.00 0.00 41.47 3.74
2774 8771 7.769044 GGCATTTTGTAGTGATTAAGGAGAGTA 59.231 37.037 0.00 0.00 0.00 2.59
2840 8837 1.339055 CGATGAATCTGTGGTGGGTGT 60.339 52.381 0.00 0.00 0.00 4.16
2843 8840 1.577328 GAATCTGTGGTGGGTGTGCG 61.577 60.000 0.00 0.00 0.00 5.34
2854 8851 2.613506 GGTGTGCGTGTTACCAGCC 61.614 63.158 0.00 0.00 34.61 4.85
2866 8863 5.384787 GTGTTACCAGCCGTAAAAATGTAC 58.615 41.667 0.00 0.00 38.67 2.90
2867 8864 5.179929 GTGTTACCAGCCGTAAAAATGTACT 59.820 40.000 0.00 0.00 38.67 2.73
2868 8865 5.409214 TGTTACCAGCCGTAAAAATGTACTC 59.591 40.000 0.00 0.00 38.67 2.59
2869 8866 3.340928 ACCAGCCGTAAAAATGTACTCC 58.659 45.455 0.00 0.00 0.00 3.85
2870 8867 2.681344 CCAGCCGTAAAAATGTACTCCC 59.319 50.000 0.00 0.00 0.00 4.30
2871 8868 3.606687 CAGCCGTAAAAATGTACTCCCT 58.393 45.455 0.00 0.00 0.00 4.20
2872 8869 3.621715 CAGCCGTAAAAATGTACTCCCTC 59.378 47.826 0.00 0.00 0.00 4.30
2873 8870 2.941064 GCCGTAAAAATGTACTCCCTCC 59.059 50.000 0.00 0.00 0.00 4.30
2874 8871 3.620472 GCCGTAAAAATGTACTCCCTCCA 60.620 47.826 0.00 0.00 0.00 3.86
2875 8872 4.777463 CCGTAAAAATGTACTCCCTCCAT 58.223 43.478 0.00 0.00 0.00 3.41
2876 8873 5.190677 CCGTAAAAATGTACTCCCTCCATT 58.809 41.667 0.00 0.00 0.00 3.16
2877 8874 5.296035 CCGTAAAAATGTACTCCCTCCATTC 59.704 44.000 0.00 0.00 0.00 2.67
2878 8875 5.296035 CGTAAAAATGTACTCCCTCCATTCC 59.704 44.000 0.00 0.00 0.00 3.01
2879 8876 5.536497 AAAAATGTACTCCCTCCATTCCT 57.464 39.130 0.00 0.00 0.00 3.36
2880 8877 6.652205 AAAAATGTACTCCCTCCATTCCTA 57.348 37.500 0.00 0.00 0.00 2.94
2881 8878 6.652205 AAAATGTACTCCCTCCATTCCTAA 57.348 37.500 0.00 0.00 0.00 2.69
2882 8879 6.652205 AAATGTACTCCCTCCATTCCTAAA 57.348 37.500 0.00 0.00 0.00 1.85
2883 8880 6.848562 AATGTACTCCCTCCATTCCTAAAT 57.151 37.500 0.00 0.00 0.00 1.40
2884 8881 7.947782 AATGTACTCCCTCCATTCCTAAATA 57.052 36.000 0.00 0.00 0.00 1.40
2885 8882 8.525729 AATGTACTCCCTCCATTCCTAAATAT 57.474 34.615 0.00 0.00 0.00 1.28
2886 8883 9.629649 AATGTACTCCCTCCATTCCTAAATATA 57.370 33.333 0.00 0.00 0.00 0.86
2887 8884 8.666129 TGTACTCCCTCCATTCCTAAATATAG 57.334 38.462 0.00 0.00 0.00 1.31
2888 8885 8.239478 TGTACTCCCTCCATTCCTAAATATAGT 58.761 37.037 0.00 0.00 0.00 2.12
2889 8886 7.560796 ACTCCCTCCATTCCTAAATATAGTG 57.439 40.000 0.00 0.00 0.00 2.74
2890 8887 6.013293 ACTCCCTCCATTCCTAAATATAGTGC 60.013 42.308 0.00 0.00 0.00 4.40
2891 8888 5.046591 TCCCTCCATTCCTAAATATAGTGCG 60.047 44.000 0.00 0.00 0.00 5.34
2892 8889 5.280011 CCCTCCATTCCTAAATATAGTGCGT 60.280 44.000 0.00 0.00 0.00 5.24
2893 8890 6.070995 CCCTCCATTCCTAAATATAGTGCGTA 60.071 42.308 0.00 0.00 0.00 4.42
2894 8891 7.364762 CCCTCCATTCCTAAATATAGTGCGTAT 60.365 40.741 0.00 0.00 0.00 3.06
2895 8892 8.692710 CCTCCATTCCTAAATATAGTGCGTATA 58.307 37.037 0.00 0.00 0.00 1.47
2898 8895 8.818057 CCATTCCTAAATATAGTGCGTATAAGC 58.182 37.037 3.45 3.45 37.71 3.09
2899 8896 9.587772 CATTCCTAAATATAGTGCGTATAAGCT 57.412 33.333 11.96 0.00 38.13 3.74
2901 8898 9.991906 TTCCTAAATATAGTGCGTATAAGCTTT 57.008 29.630 3.20 5.57 38.13 3.51
2902 8899 9.991906 TCCTAAATATAGTGCGTATAAGCTTTT 57.008 29.630 3.20 0.00 38.13 2.27
2912 8909 9.765795 AGTGCGTATAAGCTTTTTAGAGATATT 57.234 29.630 3.20 0.00 38.13 1.28
2914 8911 9.204570 TGCGTATAAGCTTTTTAGAGATATTCC 57.795 33.333 3.20 0.00 38.13 3.01
2915 8912 8.373992 GCGTATAAGCTTTTTAGAGATATTCCG 58.626 37.037 3.20 0.00 0.00 4.30
2916 8913 8.373992 CGTATAAGCTTTTTAGAGATATTCCGC 58.626 37.037 3.20 0.00 0.00 5.54
2917 8914 9.204570 GTATAAGCTTTTTAGAGATATTCCGCA 57.795 33.333 3.20 0.00 0.00 5.69
2918 8915 8.677148 ATAAGCTTTTTAGAGATATTCCGCAA 57.323 30.769 3.20 0.00 0.00 4.85
2919 8916 7.573968 AAGCTTTTTAGAGATATTCCGCAAT 57.426 32.000 0.00 0.00 0.00 3.56
2920 8917 6.963796 AGCTTTTTAGAGATATTCCGCAATG 58.036 36.000 0.00 0.00 0.00 2.82
2921 8918 6.543831 AGCTTTTTAGAGATATTCCGCAATGT 59.456 34.615 0.00 0.00 0.00 2.71
2922 8919 7.715249 AGCTTTTTAGAGATATTCCGCAATGTA 59.285 33.333 0.00 0.00 0.00 2.29
2923 8920 8.012241 GCTTTTTAGAGATATTCCGCAATGTAG 58.988 37.037 0.00 0.00 0.00 2.74
2924 8921 8.958119 TTTTTAGAGATATTCCGCAATGTAGT 57.042 30.769 0.00 0.00 0.00 2.73
2925 8922 7.946655 TTTAGAGATATTCCGCAATGTAGTG 57.053 36.000 0.00 0.00 0.00 2.74
2926 8923 5.537300 AGAGATATTCCGCAATGTAGTGT 57.463 39.130 0.00 0.00 0.00 3.55
2927 8924 5.292765 AGAGATATTCCGCAATGTAGTGTG 58.707 41.667 0.00 0.00 0.00 3.82
2928 8925 5.023533 AGATATTCCGCAATGTAGTGTGT 57.976 39.130 0.00 0.00 0.00 3.72
2929 8926 6.040504 AGAGATATTCCGCAATGTAGTGTGTA 59.959 38.462 0.00 0.00 0.00 2.90
2930 8927 6.759272 AGATATTCCGCAATGTAGTGTGTAT 58.241 36.000 0.00 0.00 0.00 2.29
2931 8928 6.868864 AGATATTCCGCAATGTAGTGTGTATC 59.131 38.462 0.00 0.00 0.00 2.24
2932 8929 4.465632 TTCCGCAATGTAGTGTGTATCT 57.534 40.909 0.00 0.00 0.00 1.98
2933 8930 4.041740 TCCGCAATGTAGTGTGTATCTC 57.958 45.455 0.00 0.00 0.00 2.75
2934 8931 3.123804 CCGCAATGTAGTGTGTATCTCC 58.876 50.000 0.00 0.00 0.00 3.71
2935 8932 3.123804 CGCAATGTAGTGTGTATCTCCC 58.876 50.000 0.00 0.00 0.00 4.30
2936 8933 3.181475 CGCAATGTAGTGTGTATCTCCCT 60.181 47.826 0.00 0.00 0.00 4.20
2937 8934 4.372656 GCAATGTAGTGTGTATCTCCCTC 58.627 47.826 0.00 0.00 0.00 4.30
2938 8935 4.740934 GCAATGTAGTGTGTATCTCCCTCC 60.741 50.000 0.00 0.00 0.00 4.30
2939 8936 3.028094 TGTAGTGTGTATCTCCCTCCC 57.972 52.381 0.00 0.00 0.00 4.30
2940 8937 2.317973 GTAGTGTGTATCTCCCTCCCC 58.682 57.143 0.00 0.00 0.00 4.81
2941 8938 0.716591 AGTGTGTATCTCCCTCCCCA 59.283 55.000 0.00 0.00 0.00 4.96
2942 8939 1.080498 AGTGTGTATCTCCCTCCCCAA 59.920 52.381 0.00 0.00 0.00 4.12
2943 8940 1.486726 GTGTGTATCTCCCTCCCCAAG 59.513 57.143 0.00 0.00 0.00 3.61
2944 8941 0.470341 GTGTATCTCCCTCCCCAAGC 59.530 60.000 0.00 0.00 0.00 4.01
2945 8942 1.048724 TGTATCTCCCTCCCCAAGCG 61.049 60.000 0.00 0.00 0.00 4.68
2946 8943 0.759436 GTATCTCCCTCCCCAAGCGA 60.759 60.000 0.00 0.00 0.00 4.93
2947 8944 0.191064 TATCTCCCTCCCCAAGCGAT 59.809 55.000 0.00 0.00 0.00 4.58
2948 8945 0.695803 ATCTCCCTCCCCAAGCGATT 60.696 55.000 0.00 0.00 0.00 3.34
2949 8946 0.914417 TCTCCCTCCCCAAGCGATTT 60.914 55.000 0.00 0.00 0.00 2.17
2950 8947 0.034089 CTCCCTCCCCAAGCGATTTT 60.034 55.000 0.00 0.00 0.00 1.82
2951 8948 0.407918 TCCCTCCCCAAGCGATTTTT 59.592 50.000 0.00 0.00 0.00 1.94
2952 8949 0.532115 CCCTCCCCAAGCGATTTTTG 59.468 55.000 0.00 0.00 0.00 2.44
2953 8950 0.532115 CCTCCCCAAGCGATTTTTGG 59.468 55.000 0.00 0.00 43.77 3.28
2954 8951 1.544724 CTCCCCAAGCGATTTTTGGA 58.455 50.000 5.62 3.31 46.42 3.53
2955 8952 1.202348 CTCCCCAAGCGATTTTTGGAC 59.798 52.381 5.62 0.00 46.42 4.02
2956 8953 0.109319 CCCCAAGCGATTTTTGGACG 60.109 55.000 5.62 0.00 46.42 4.79
2957 8954 0.878416 CCCAAGCGATTTTTGGACGA 59.122 50.000 5.62 0.00 46.42 4.20
2958 8955 1.268352 CCCAAGCGATTTTTGGACGAA 59.732 47.619 5.62 0.00 46.42 3.85
2959 8956 2.287909 CCCAAGCGATTTTTGGACGAAA 60.288 45.455 5.62 0.00 46.42 3.46
2960 8957 2.724174 CCAAGCGATTTTTGGACGAAAC 59.276 45.455 0.00 0.00 46.42 2.78
2961 8958 3.550030 CCAAGCGATTTTTGGACGAAACT 60.550 43.478 0.00 0.00 46.42 2.66
2962 8959 4.319911 CCAAGCGATTTTTGGACGAAACTA 60.320 41.667 0.00 0.00 46.42 2.24
2963 8960 4.400036 AGCGATTTTTGGACGAAACTAC 57.600 40.909 0.00 0.00 0.00 2.73
2964 8961 3.187842 AGCGATTTTTGGACGAAACTACC 59.812 43.478 0.00 0.00 0.00 3.18
2965 8962 3.668757 GCGATTTTTGGACGAAACTACCC 60.669 47.826 0.00 0.00 0.00 3.69
2966 8963 3.749609 CGATTTTTGGACGAAACTACCCT 59.250 43.478 0.00 0.00 0.00 4.34
2967 8964 4.142966 CGATTTTTGGACGAAACTACCCTC 60.143 45.833 0.00 0.00 0.00 4.30
2968 8965 2.845363 TTTGGACGAAACTACCCTCC 57.155 50.000 0.00 0.00 0.00 4.30
2969 8966 0.978907 TTGGACGAAACTACCCTCCC 59.021 55.000 0.00 0.00 0.00 4.30
2970 8967 0.178926 TGGACGAAACTACCCTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
2971 8968 0.248565 GGACGAAACTACCCTCCCAC 59.751 60.000 0.00 0.00 0.00 4.61
2972 8969 0.248565 GACGAAACTACCCTCCCACC 59.751 60.000 0.00 0.00 0.00 4.61
2973 8970 0.472352 ACGAAACTACCCTCCCACCA 60.472 55.000 0.00 0.00 0.00 4.17
2974 8971 0.688487 CGAAACTACCCTCCCACCAA 59.312 55.000 0.00 0.00 0.00 3.67
2975 8972 1.072648 CGAAACTACCCTCCCACCAAA 59.927 52.381 0.00 0.00 0.00 3.28
2976 8973 2.511659 GAAACTACCCTCCCACCAAAC 58.488 52.381 0.00 0.00 0.00 2.93
2977 8974 0.775542 AACTACCCTCCCACCAAACC 59.224 55.000 0.00 0.00 0.00 3.27
2978 8975 0.402272 ACTACCCTCCCACCAAACCA 60.402 55.000 0.00 0.00 0.00 3.67
2979 8976 0.774908 CTACCCTCCCACCAAACCAA 59.225 55.000 0.00 0.00 0.00 3.67
2980 8977 1.146152 CTACCCTCCCACCAAACCAAA 59.854 52.381 0.00 0.00 0.00 3.28
2981 8978 0.397957 ACCCTCCCACCAAACCAAAC 60.398 55.000 0.00 0.00 0.00 2.93
2982 8979 0.397816 CCCTCCCACCAAACCAAACA 60.398 55.000 0.00 0.00 0.00 2.83
2983 8980 1.039856 CCTCCCACCAAACCAAACAG 58.960 55.000 0.00 0.00 0.00 3.16
2984 8981 0.389025 CTCCCACCAAACCAAACAGC 59.611 55.000 0.00 0.00 0.00 4.40
2985 8982 1.045911 TCCCACCAAACCAAACAGCC 61.046 55.000 0.00 0.00 0.00 4.85
2986 8983 1.333636 CCCACCAAACCAAACAGCCA 61.334 55.000 0.00 0.00 0.00 4.75
2987 8984 0.104671 CCACCAAACCAAACAGCCAG 59.895 55.000 0.00 0.00 0.00 4.85
2988 8985 0.530431 CACCAAACCAAACAGCCAGC 60.530 55.000 0.00 0.00 0.00 4.85
2989 8986 1.300080 CCAAACCAAACAGCCAGCG 60.300 57.895 0.00 0.00 0.00 5.18
2990 8987 1.950630 CAAACCAAACAGCCAGCGC 60.951 57.895 0.00 0.00 0.00 5.92
2991 8988 3.150647 AAACCAAACAGCCAGCGCC 62.151 57.895 2.29 0.00 34.57 6.53
3019 9016 4.186433 CGCTTCGCTCGCCTCTCT 62.186 66.667 0.00 0.00 0.00 3.10
3020 9017 2.278531 GCTTCGCTCGCCTCTCTC 60.279 66.667 0.00 0.00 0.00 3.20
3021 9018 2.770589 GCTTCGCTCGCCTCTCTCT 61.771 63.158 0.00 0.00 0.00 3.10
3022 9019 1.355210 CTTCGCTCGCCTCTCTCTC 59.645 63.158 0.00 0.00 0.00 3.20
3023 9020 1.078072 TTCGCTCGCCTCTCTCTCT 60.078 57.895 0.00 0.00 0.00 3.10
3024 9021 0.678366 TTCGCTCGCCTCTCTCTCTT 60.678 55.000 0.00 0.00 0.00 2.85
3025 9022 1.092921 TCGCTCGCCTCTCTCTCTTC 61.093 60.000 0.00 0.00 0.00 2.87
3026 9023 1.733526 GCTCGCCTCTCTCTCTTCC 59.266 63.158 0.00 0.00 0.00 3.46
3027 9024 0.751643 GCTCGCCTCTCTCTCTTCCT 60.752 60.000 0.00 0.00 0.00 3.36
3028 9025 1.762708 CTCGCCTCTCTCTCTTCCTT 58.237 55.000 0.00 0.00 0.00 3.36
3029 9026 2.925724 CTCGCCTCTCTCTCTTCCTTA 58.074 52.381 0.00 0.00 0.00 2.69
3030 9027 3.486383 CTCGCCTCTCTCTCTTCCTTAT 58.514 50.000 0.00 0.00 0.00 1.73
3031 9028 3.482436 TCGCCTCTCTCTCTTCCTTATC 58.518 50.000 0.00 0.00 0.00 1.75
3032 9029 2.556622 CGCCTCTCTCTCTTCCTTATCC 59.443 54.545 0.00 0.00 0.00 2.59
3033 9030 2.897326 GCCTCTCTCTCTTCCTTATCCC 59.103 54.545 0.00 0.00 0.00 3.85
3034 9031 3.437931 GCCTCTCTCTCTTCCTTATCCCT 60.438 52.174 0.00 0.00 0.00 4.20
3035 9032 4.814967 CCTCTCTCTCTTCCTTATCCCTT 58.185 47.826 0.00 0.00 0.00 3.95
3036 9033 4.832823 CCTCTCTCTCTTCCTTATCCCTTC 59.167 50.000 0.00 0.00 0.00 3.46
3037 9034 4.465886 TCTCTCTCTTCCTTATCCCTTCG 58.534 47.826 0.00 0.00 0.00 3.79
3038 9035 4.079672 TCTCTCTCTTCCTTATCCCTTCGT 60.080 45.833 0.00 0.00 0.00 3.85
3039 9036 4.208746 TCTCTCTTCCTTATCCCTTCGTC 58.791 47.826 0.00 0.00 0.00 4.20
3040 9037 4.079672 TCTCTCTTCCTTATCCCTTCGTCT 60.080 45.833 0.00 0.00 0.00 4.18
3041 9038 4.208746 TCTCTTCCTTATCCCTTCGTCTC 58.791 47.826 0.00 0.00 0.00 3.36
3042 9039 2.950309 TCTTCCTTATCCCTTCGTCTCG 59.050 50.000 0.00 0.00 0.00 4.04
3043 9040 1.030457 TCCTTATCCCTTCGTCTCGC 58.970 55.000 0.00 0.00 0.00 5.03
3044 9041 0.317938 CCTTATCCCTTCGTCTCGCG 60.318 60.000 0.00 0.00 43.01 5.87
3045 9042 0.317938 CTTATCCCTTCGTCTCGCGG 60.318 60.000 6.13 0.00 41.72 6.46
3046 9043 2.345880 TTATCCCTTCGTCTCGCGGC 62.346 60.000 6.13 0.00 41.72 6.53
3048 9045 4.436998 CCCTTCGTCTCGCGGCTT 62.437 66.667 6.13 0.00 41.72 4.35
3049 9046 2.432628 CCTTCGTCTCGCGGCTTT 60.433 61.111 6.13 0.00 41.72 3.51
3050 9047 2.027625 CCTTCGTCTCGCGGCTTTT 61.028 57.895 6.13 0.00 41.72 2.27
3051 9048 1.416434 CTTCGTCTCGCGGCTTTTC 59.584 57.895 6.13 0.00 41.72 2.29
3052 9049 1.956620 CTTCGTCTCGCGGCTTTTCC 61.957 60.000 6.13 0.00 41.72 3.13
3053 9050 3.488090 CGTCTCGCGGCTTTTCCC 61.488 66.667 6.13 0.00 36.85 3.97
3054 9051 2.358247 GTCTCGCGGCTTTTCCCA 60.358 61.111 6.13 0.00 0.00 4.37
3055 9052 2.358247 TCTCGCGGCTTTTCCCAC 60.358 61.111 6.13 0.00 0.00 4.61
3056 9053 3.431725 CTCGCGGCTTTTCCCACC 61.432 66.667 6.13 0.00 0.00 4.61
3057 9054 3.901797 CTCGCGGCTTTTCCCACCT 62.902 63.158 6.13 0.00 0.00 4.00
3058 9055 3.737172 CGCGGCTTTTCCCACCTG 61.737 66.667 0.00 0.00 0.00 4.00
3059 9056 4.056125 GCGGCTTTTCCCACCTGC 62.056 66.667 0.00 0.00 0.00 4.85
3060 9057 3.373565 CGGCTTTTCCCACCTGCC 61.374 66.667 0.00 0.00 40.14 4.85
3061 9058 2.118294 GGCTTTTCCCACCTGCCT 59.882 61.111 0.00 0.00 40.36 4.75
3062 9059 1.979155 GGCTTTTCCCACCTGCCTC 60.979 63.158 0.00 0.00 40.36 4.70
3063 9060 2.335712 GCTTTTCCCACCTGCCTCG 61.336 63.158 0.00 0.00 0.00 4.63
3064 9061 2.282180 TTTTCCCACCTGCCTCGC 60.282 61.111 0.00 0.00 0.00 5.03
3065 9062 3.860930 TTTTCCCACCTGCCTCGCC 62.861 63.158 0.00 0.00 0.00 5.54
3072 9069 4.899239 CCTGCCTCGCCACCGATC 62.899 72.222 0.00 0.00 43.47 3.69
3073 9070 3.842923 CTGCCTCGCCACCGATCT 61.843 66.667 0.00 0.00 43.47 2.75
3074 9071 4.147449 TGCCTCGCCACCGATCTG 62.147 66.667 0.00 0.00 43.47 2.90
3076 9073 4.899239 CCTCGCCACCGATCTGCC 62.899 72.222 0.00 0.00 43.47 4.85
3077 9074 4.147449 CTCGCCACCGATCTGCCA 62.147 66.667 0.00 0.00 43.47 4.92
3078 9075 4.451150 TCGCCACCGATCTGCCAC 62.451 66.667 0.00 0.00 38.82 5.01
3080 9077 4.101448 GCCACCGATCTGCCACCT 62.101 66.667 0.00 0.00 0.00 4.00
3081 9078 2.187946 CCACCGATCTGCCACCTC 59.812 66.667 0.00 0.00 0.00 3.85
3082 9079 2.362369 CCACCGATCTGCCACCTCT 61.362 63.158 0.00 0.00 0.00 3.69
3083 9080 1.153489 CACCGATCTGCCACCTCTG 60.153 63.158 0.00 0.00 0.00 3.35
3084 9081 1.610673 ACCGATCTGCCACCTCTGT 60.611 57.895 0.00 0.00 0.00 3.41
3085 9082 1.194781 ACCGATCTGCCACCTCTGTT 61.195 55.000 0.00 0.00 0.00 3.16
3086 9083 0.742281 CCGATCTGCCACCTCTGTTG 60.742 60.000 0.00 0.00 0.00 3.33
3087 9084 1.364626 CGATCTGCCACCTCTGTTGC 61.365 60.000 0.00 0.00 33.87 4.17
3088 9085 0.035630 GATCTGCCACCTCTGTTGCT 60.036 55.000 0.00 0.00 34.36 3.91
3089 9086 0.322277 ATCTGCCACCTCTGTTGCTG 60.322 55.000 0.00 0.00 34.36 4.41
3090 9087 1.071987 CTGCCACCTCTGTTGCTGA 59.928 57.895 0.00 0.00 35.06 4.26
3091 9088 0.322277 CTGCCACCTCTGTTGCTGAT 60.322 55.000 0.00 0.00 35.06 2.90
3092 9089 0.321919 TGCCACCTCTGTTGCTGATC 60.322 55.000 0.00 0.00 34.36 2.92
3093 9090 1.028868 GCCACCTCTGTTGCTGATCC 61.029 60.000 0.00 0.00 30.73 3.36
3094 9091 0.393537 CCACCTCTGTTGCTGATCCC 60.394 60.000 0.00 0.00 0.00 3.85
3095 9092 0.617413 CACCTCTGTTGCTGATCCCT 59.383 55.000 0.00 0.00 0.00 4.20
3096 9093 1.833630 CACCTCTGTTGCTGATCCCTA 59.166 52.381 0.00 0.00 0.00 3.53
3097 9094 1.834263 ACCTCTGTTGCTGATCCCTAC 59.166 52.381 0.00 0.00 0.00 3.18
3098 9095 1.139853 CCTCTGTTGCTGATCCCTACC 59.860 57.143 0.00 0.00 0.00 3.18
3099 9096 2.114616 CTCTGTTGCTGATCCCTACCT 58.885 52.381 0.00 0.00 0.00 3.08
3100 9097 2.102252 CTCTGTTGCTGATCCCTACCTC 59.898 54.545 0.00 0.00 0.00 3.85
3101 9098 1.139853 CTGTTGCTGATCCCTACCTCC 59.860 57.143 0.00 0.00 0.00 4.30
3102 9099 1.204146 GTTGCTGATCCCTACCTCCA 58.796 55.000 0.00 0.00 0.00 3.86
3103 9100 1.771255 GTTGCTGATCCCTACCTCCAT 59.229 52.381 0.00 0.00 0.00 3.41
3104 9101 2.173569 GTTGCTGATCCCTACCTCCATT 59.826 50.000 0.00 0.00 0.00 3.16
3105 9102 1.770658 TGCTGATCCCTACCTCCATTG 59.229 52.381 0.00 0.00 0.00 2.82
3106 9103 1.544314 GCTGATCCCTACCTCCATTGC 60.544 57.143 0.00 0.00 0.00 3.56
3107 9104 0.758734 TGATCCCTACCTCCATTGCG 59.241 55.000 0.00 0.00 0.00 4.85
3108 9105 1.048601 GATCCCTACCTCCATTGCGA 58.951 55.000 0.00 0.00 0.00 5.10
3109 9106 0.759346 ATCCCTACCTCCATTGCGAC 59.241 55.000 0.00 0.00 0.00 5.19
3110 9107 0.616395 TCCCTACCTCCATTGCGACA 60.616 55.000 0.00 0.00 0.00 4.35
3111 9108 0.251916 CCCTACCTCCATTGCGACAA 59.748 55.000 0.00 0.00 0.00 3.18
3112 9109 1.369625 CCTACCTCCATTGCGACAAC 58.630 55.000 0.00 0.00 0.00 3.32
3113 9110 1.338674 CCTACCTCCATTGCGACAACA 60.339 52.381 0.00 0.00 0.00 3.33
3114 9111 1.732259 CTACCTCCATTGCGACAACAC 59.268 52.381 0.00 0.00 0.00 3.32
3115 9112 0.179032 ACCTCCATTGCGACAACACA 60.179 50.000 0.00 0.00 0.00 3.72
3116 9113 0.518636 CCTCCATTGCGACAACACAG 59.481 55.000 0.00 0.00 0.00 3.66
3117 9114 1.229428 CTCCATTGCGACAACACAGT 58.771 50.000 0.00 0.00 0.00 3.55
3118 9115 2.412870 CTCCATTGCGACAACACAGTA 58.587 47.619 0.00 0.00 0.00 2.74
3119 9116 2.412870 TCCATTGCGACAACACAGTAG 58.587 47.619 0.00 0.00 0.00 2.57
3120 9117 2.036604 TCCATTGCGACAACACAGTAGA 59.963 45.455 0.00 0.00 0.00 2.59
3121 9118 3.002791 CCATTGCGACAACACAGTAGAT 58.997 45.455 0.00 0.00 0.00 1.98
3122 9119 3.062639 CCATTGCGACAACACAGTAGATC 59.937 47.826 0.00 0.00 0.00 2.75
3123 9120 1.977188 TGCGACAACACAGTAGATCG 58.023 50.000 0.00 0.00 0.00 3.69
3124 9121 1.538075 TGCGACAACACAGTAGATCGA 59.462 47.619 0.00 0.00 0.00 3.59
3125 9122 2.177977 GCGACAACACAGTAGATCGAG 58.822 52.381 0.00 0.00 0.00 4.04
3126 9123 2.414293 GCGACAACACAGTAGATCGAGT 60.414 50.000 0.00 0.00 0.00 4.18
3127 9124 3.822996 CGACAACACAGTAGATCGAGTT 58.177 45.455 0.00 0.00 0.00 3.01
3128 9125 3.604198 CGACAACACAGTAGATCGAGTTG 59.396 47.826 7.98 7.98 41.37 3.16
3129 9126 3.318017 ACAACACAGTAGATCGAGTTGC 58.682 45.455 9.13 0.00 39.78 4.17
3130 9127 3.005897 ACAACACAGTAGATCGAGTTGCT 59.994 43.478 9.13 0.00 39.78 3.91
3131 9128 3.944055 ACACAGTAGATCGAGTTGCTT 57.056 42.857 0.00 0.00 0.00 3.91
3132 9129 3.839293 ACACAGTAGATCGAGTTGCTTC 58.161 45.455 0.00 0.00 0.00 3.86
3133 9130 3.508012 ACACAGTAGATCGAGTTGCTTCT 59.492 43.478 0.00 0.00 0.00 2.85
3134 9131 4.700692 ACACAGTAGATCGAGTTGCTTCTA 59.299 41.667 0.00 0.00 0.00 2.10
3135 9132 5.163703 ACACAGTAGATCGAGTTGCTTCTAG 60.164 44.000 0.00 0.00 0.00 2.43
3136 9133 4.336993 ACAGTAGATCGAGTTGCTTCTAGG 59.663 45.833 0.00 0.00 0.00 3.02
3137 9134 2.880963 AGATCGAGTTGCTTCTAGGC 57.119 50.000 0.00 0.00 0.00 3.93
3138 9135 2.103373 AGATCGAGTTGCTTCTAGGCA 58.897 47.619 0.00 0.00 40.74 4.75
3145 9142 0.035056 TTGCTTCTAGGCAAGAGGGC 60.035 55.000 2.65 4.69 45.64 5.19
3152 9149 4.785453 GGCAAGAGGGCCGAGGTG 62.785 72.222 0.00 0.00 45.40 4.00
3153 9150 4.785453 GCAAGAGGGCCGAGGTGG 62.785 72.222 0.00 0.00 42.50 4.61
3154 9151 3.003173 CAAGAGGGCCGAGGTGGA 61.003 66.667 0.00 0.00 42.00 4.02
3163 9160 3.812019 CGAGGTGGACGGACGAGG 61.812 72.222 0.00 0.00 0.00 4.63
3164 9161 2.675772 GAGGTGGACGGACGAGGT 60.676 66.667 0.00 0.00 0.00 3.85
3165 9162 2.989824 AGGTGGACGGACGAGGTG 60.990 66.667 0.00 0.00 0.00 4.00
3166 9163 4.736896 GGTGGACGGACGAGGTGC 62.737 72.222 0.00 0.00 0.00 5.01
3167 9164 3.681835 GTGGACGGACGAGGTGCT 61.682 66.667 0.00 0.00 0.00 4.40
3168 9165 3.680786 TGGACGGACGAGGTGCTG 61.681 66.667 0.00 0.00 0.00 4.41
3170 9167 4.357947 GACGGACGAGGTGCTGCA 62.358 66.667 0.00 0.00 0.00 4.41
3171 9168 4.664677 ACGGACGAGGTGCTGCAC 62.665 66.667 24.02 24.02 0.00 4.57
3172 9169 4.662961 CGGACGAGGTGCTGCACA 62.663 66.667 31.35 0.00 35.86 4.57
3173 9170 2.280797 GGACGAGGTGCTGCACAA 60.281 61.111 31.35 0.00 35.86 3.33
3174 9171 1.891919 GGACGAGGTGCTGCACAAA 60.892 57.895 31.35 0.00 35.86 2.83
3175 9172 1.237285 GGACGAGGTGCTGCACAAAT 61.237 55.000 31.35 18.01 35.86 2.32
3176 9173 0.166814 GACGAGGTGCTGCACAAATC 59.833 55.000 31.35 23.30 35.86 2.17
3177 9174 1.133253 CGAGGTGCTGCACAAATCG 59.867 57.895 31.35 29.05 35.86 3.34
3178 9175 1.503542 GAGGTGCTGCACAAATCGG 59.496 57.895 31.35 0.00 35.86 4.18
3179 9176 2.126346 GGTGCTGCACAAATCGGC 60.126 61.111 31.35 10.78 35.86 5.54
3180 9177 2.644418 GTGCTGCACAAATCGGCA 59.356 55.556 26.70 0.00 42.92 5.69
3181 9178 1.007502 GTGCTGCACAAATCGGCAA 60.008 52.632 26.70 0.00 46.12 4.52
3182 9179 1.005294 GTGCTGCACAAATCGGCAAG 61.005 55.000 26.70 0.00 46.12 4.01
3183 9180 2.090524 GCTGCACAAATCGGCAAGC 61.091 57.895 0.00 0.00 39.93 4.01
3184 9181 1.798725 CTGCACAAATCGGCAAGCG 60.799 57.895 0.00 0.00 39.93 4.68
3185 9182 2.504681 GCACAAATCGGCAAGCGG 60.505 61.111 0.00 0.00 0.00 5.52
3186 9183 2.179018 CACAAATCGGCAAGCGGG 59.821 61.111 0.00 0.00 0.00 6.13
3187 9184 2.033448 ACAAATCGGCAAGCGGGA 59.967 55.556 0.00 0.00 0.00 5.14
3188 9185 2.040544 ACAAATCGGCAAGCGGGAG 61.041 57.895 0.00 0.00 0.00 4.30
3235 9232 4.821589 CGGAGGGCGAGCTCCAAC 62.822 72.222 8.47 0.00 39.62 3.77
3236 9233 3.706373 GGAGGGCGAGCTCCAACA 61.706 66.667 8.47 0.00 39.45 3.33
3237 9234 2.435059 GAGGGCGAGCTCCAACAC 60.435 66.667 8.47 0.00 0.00 3.32
3238 9235 4.379243 AGGGCGAGCTCCAACACG 62.379 66.667 8.47 0.00 0.00 4.49
3239 9236 4.681978 GGGCGAGCTCCAACACGT 62.682 66.667 8.47 0.00 0.00 4.49
3240 9237 3.414700 GGCGAGCTCCAACACGTG 61.415 66.667 15.48 15.48 0.00 4.49
3241 9238 2.355837 GCGAGCTCCAACACGTGA 60.356 61.111 25.01 0.00 0.00 4.35
3242 9239 1.954146 GCGAGCTCCAACACGTGAA 60.954 57.895 25.01 3.53 0.00 3.18
3243 9240 1.891060 GCGAGCTCCAACACGTGAAG 61.891 60.000 25.01 13.62 0.00 3.02
3244 9241 1.862806 GAGCTCCAACACGTGAAGC 59.137 57.895 25.01 22.37 0.00 3.86
3245 9242 0.601311 GAGCTCCAACACGTGAAGCT 60.601 55.000 26.82 26.82 0.00 3.74
3246 9243 0.601311 AGCTCCAACACGTGAAGCTC 60.601 55.000 25.01 6.46 0.00 4.09
3247 9244 0.880278 GCTCCAACACGTGAAGCTCA 60.880 55.000 25.01 0.00 0.00 4.26
3248 9245 1.143305 CTCCAACACGTGAAGCTCAG 58.857 55.000 25.01 6.10 0.00 3.35
3249 9246 0.464036 TCCAACACGTGAAGCTCAGT 59.536 50.000 25.01 0.00 0.00 3.41
3250 9247 0.583438 CCAACACGTGAAGCTCAGTG 59.417 55.000 25.01 6.44 40.17 3.66
3251 9248 0.583438 CAACACGTGAAGCTCAGTGG 59.417 55.000 25.01 0.00 38.78 4.00
3252 9249 1.160329 AACACGTGAAGCTCAGTGGC 61.160 55.000 25.01 0.00 38.78 5.01
3253 9250 1.595109 CACGTGAAGCTCAGTGGCA 60.595 57.895 10.90 0.00 34.17 4.92
3254 9251 1.595382 ACGTGAAGCTCAGTGGCAC 60.595 57.895 10.29 10.29 34.17 5.01
3255 9252 1.595109 CGTGAAGCTCAGTGGCACA 60.595 57.895 21.41 0.00 34.17 4.57
3256 9253 1.563435 CGTGAAGCTCAGTGGCACAG 61.563 60.000 21.41 12.62 41.80 3.66
3257 9254 0.250038 GTGAAGCTCAGTGGCACAGA 60.250 55.000 21.41 16.67 41.80 3.41
3258 9255 0.034476 TGAAGCTCAGTGGCACAGAG 59.966 55.000 29.31 29.31 41.80 3.35
3268 9265 3.660621 GCACAGAGCAGGTTCACC 58.339 61.111 0.00 0.00 44.79 4.02
3269 9266 1.227943 GCACAGAGCAGGTTCACCA 60.228 57.895 0.00 0.00 44.79 4.17
3270 9267 1.233285 GCACAGAGCAGGTTCACCAG 61.233 60.000 0.00 0.00 44.79 4.00
3275 9272 2.203337 GCAGGTTCACCAGCCACA 60.203 61.111 1.92 0.00 42.01 4.17
3276 9273 2.263741 GCAGGTTCACCAGCCACAG 61.264 63.158 1.92 0.00 42.01 3.66
3277 9274 1.601759 CAGGTTCACCAGCCACAGG 60.602 63.158 0.00 0.00 38.89 4.00
3278 9275 1.770110 AGGTTCACCAGCCACAGGA 60.770 57.895 0.00 0.00 38.89 3.86
3279 9276 1.302832 GGTTCACCAGCCACAGGAG 60.303 63.158 0.00 0.00 35.64 3.69
3280 9277 1.968540 GTTCACCAGCCACAGGAGC 60.969 63.158 0.00 0.00 0.00 4.70
3281 9278 2.149383 TTCACCAGCCACAGGAGCT 61.149 57.895 0.00 0.00 42.70 4.09
3282 9279 2.046507 CACCAGCCACAGGAGCTC 60.047 66.667 4.71 4.71 38.95 4.09
3283 9280 3.325753 ACCAGCCACAGGAGCTCC 61.326 66.667 26.22 26.22 38.95 4.70
3284 9281 3.324930 CCAGCCACAGGAGCTCCA 61.325 66.667 33.90 0.00 38.95 3.86
3285 9282 2.268280 CAGCCACAGGAGCTCCAG 59.732 66.667 33.90 28.31 38.95 3.86
3286 9283 2.203907 AGCCACAGGAGCTCCAGT 60.204 61.111 33.90 29.04 34.91 4.00
3289 9286 4.689484 CACAGGAGCTCCAGTGTG 57.311 61.111 37.33 33.67 45.19 3.82
3290 9287 2.052779 CACAGGAGCTCCAGTGTGA 58.947 57.895 37.33 0.00 45.19 3.58
3291 9288 0.037512 CACAGGAGCTCCAGTGTGAG 60.038 60.000 37.33 21.82 45.19 3.51
3313 9310 4.833561 CGCACGCGAGCATCAACG 62.834 66.667 27.33 6.89 42.83 4.10
3314 9311 4.505217 GCACGCGAGCATCAACGG 62.505 66.667 23.72 0.00 38.48 4.44
3315 9312 3.853330 CACGCGAGCATCAACGGG 61.853 66.667 15.93 0.00 45.28 5.28
3319 9316 3.197790 CGAGCATCAACGGGGCAG 61.198 66.667 0.00 0.00 33.17 4.85
3320 9317 2.268920 GAGCATCAACGGGGCAGA 59.731 61.111 0.00 0.00 33.17 4.26
3321 9318 1.817099 GAGCATCAACGGGGCAGAG 60.817 63.158 0.00 0.00 33.17 3.35
3322 9319 3.512516 GCATCAACGGGGCAGAGC 61.513 66.667 0.00 0.00 0.00 4.09
3323 9320 2.046023 CATCAACGGGGCAGAGCA 60.046 61.111 0.00 0.00 0.00 4.26
3324 9321 1.452651 CATCAACGGGGCAGAGCAT 60.453 57.895 0.00 0.00 0.00 3.79
3325 9322 1.452651 ATCAACGGGGCAGAGCATG 60.453 57.895 0.00 0.00 0.00 4.06
3326 9323 2.202236 ATCAACGGGGCAGAGCATGT 62.202 55.000 0.00 0.00 0.00 3.21
3327 9324 1.973281 CAACGGGGCAGAGCATGTT 60.973 57.895 0.00 0.00 0.00 2.71
3328 9325 1.675641 AACGGGGCAGAGCATGTTC 60.676 57.895 0.50 0.50 0.00 3.18
3329 9326 2.129555 AACGGGGCAGAGCATGTTCT 62.130 55.000 6.20 6.20 0.00 3.01
3330 9327 1.817099 CGGGGCAGAGCATGTTCTC 60.817 63.158 9.39 4.98 0.00 2.87
3331 9328 1.452833 GGGGCAGAGCATGTTCTCC 60.453 63.158 9.39 12.99 33.66 3.71
3332 9329 1.300963 GGGCAGAGCATGTTCTCCA 59.699 57.895 20.99 0.00 33.66 3.86
3333 9330 1.028868 GGGCAGAGCATGTTCTCCAC 61.029 60.000 20.99 8.35 33.66 4.02
3334 9331 1.028868 GGCAGAGCATGTTCTCCACC 61.029 60.000 9.39 7.94 33.66 4.61
3335 9332 1.364626 GCAGAGCATGTTCTCCACCG 61.365 60.000 9.39 0.00 33.66 4.94
3336 9333 0.247460 CAGAGCATGTTCTCCACCGA 59.753 55.000 9.39 0.00 33.66 4.69
3337 9334 0.247736 AGAGCATGTTCTCCACCGAC 59.752 55.000 6.20 0.00 33.66 4.79
3338 9335 1.078759 GAGCATGTTCTCCACCGACG 61.079 60.000 1.76 0.00 0.00 5.12
3339 9336 2.100631 GCATGTTCTCCACCGACGG 61.101 63.158 13.61 13.61 0.00 4.79
3340 9337 1.447838 CATGTTCTCCACCGACGGG 60.448 63.158 20.00 7.12 40.11 5.28
3341 9338 2.656069 ATGTTCTCCACCGACGGGG 61.656 63.158 20.00 15.35 43.62 5.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 2.112380 TGCACACGATTCCATCATGT 57.888 45.000 0.00 0.00 35.90 3.21
16 17 3.065648 TCATTGCACACGATTCCATCATG 59.934 43.478 0.00 0.00 0.00 3.07
28 30 4.097714 CCGTAATGTGAATCATTGCACAC 58.902 43.478 0.00 0.00 46.52 3.82
42 44 9.296400 GAATAAATAAAATGTGTGCCGTAATGT 57.704 29.630 0.00 0.00 0.00 2.71
45 47 9.862371 ATTGAATAAATAAAATGTGTGCCGTAA 57.138 25.926 0.00 0.00 0.00 3.18
55 57 9.852481 CGGACATGCAATTGAATAAATAAAATG 57.148 29.630 10.34 0.00 0.00 2.32
60 63 9.500785 TCTATCGGACATGCAATTGAATAAATA 57.499 29.630 10.34 0.00 0.00 1.40
61 64 8.394971 TCTATCGGACATGCAATTGAATAAAT 57.605 30.769 10.34 0.00 0.00 1.40
64 67 5.409520 GCTCTATCGGACATGCAATTGAATA 59.590 40.000 10.34 0.00 0.00 1.75
80 83 3.182572 GGTAAGAATTGTGCGCTCTATCG 59.817 47.826 9.73 0.00 0.00 2.92
89 92 5.119931 TCATTGTGTGGTAAGAATTGTGC 57.880 39.130 0.00 0.00 0.00 4.57
208 252 0.874607 AAAGACGCGCTCGAAACACT 60.875 50.000 5.73 0.00 39.41 3.55
243 287 9.750125 GAGATGTAAACTGTGTATGATACATGA 57.250 33.333 8.72 0.00 41.34 3.07
280 927 2.752354 CGTGTGATGGCCAATCCTTTTA 59.248 45.455 10.96 0.00 34.00 1.52
300 947 0.570272 GCCAGAAAACAAAACGTGCG 59.430 50.000 0.00 0.00 0.00 5.34
301 948 1.852280 GAGCCAGAAAACAAAACGTGC 59.148 47.619 0.00 0.00 0.00 5.34
330 977 7.611467 TGCAGGTATCACAGACATTAGAAAAAT 59.389 33.333 0.00 0.00 0.00 1.82
331 978 6.939730 TGCAGGTATCACAGACATTAGAAAAA 59.060 34.615 0.00 0.00 0.00 1.94
354 1001 1.339711 GACCAAATTGTGTGCGATGC 58.660 50.000 0.00 0.00 0.00 3.91
372 1019 2.224670 ACACTTATCGCAAACCCTTGGA 60.225 45.455 0.00 0.00 32.76 3.53
396 1043 7.774625 TCACTGGTGCATAATGATTCTATGAAA 59.225 33.333 0.00 0.00 0.00 2.69
411 1058 1.171308 GAAGCATGTCACTGGTGCAT 58.829 50.000 0.00 1.20 41.19 3.96
477 1124 5.589855 TGGATGCTGTAATATTTGGACACAG 59.410 40.000 9.90 9.90 39.65 3.66
484 1131 7.773864 TTGCAAATGGATGCTGTAATATTTG 57.226 32.000 0.00 0.00 46.54 2.32
488 1135 8.462589 TCTATTTGCAAATGGATGCTGTAATA 57.537 30.769 28.27 7.87 46.54 0.98
630 1284 4.926238 GGTGTGTCATTTTCAAACAACACA 59.074 37.500 13.70 13.70 40.94 3.72
739 1398 6.270000 TCTCTACCATCTTGACCTTTTCTCAA 59.730 38.462 0.00 0.00 0.00 3.02
757 1416 0.468648 CCCCCGGTGAAATCTCTACC 59.531 60.000 0.00 0.00 0.00 3.18
770 1429 3.218470 TATACGCACGACCCCCGG 61.218 66.667 0.00 0.00 43.93 5.73
779 1438 2.519377 TAGCCCATGTGTATACGCAC 57.481 50.000 20.85 8.74 39.39 5.34
836 3013 2.183046 GTCAGAGGAGCTGCGTCC 59.817 66.667 0.00 9.30 44.52 4.79
837 3014 1.645704 TACGTCAGAGGAGCTGCGTC 61.646 60.000 14.59 0.00 46.59 5.19
838 3015 2.986413 ACGTCAGAGGAGCTGCGT 60.986 61.111 0.00 0.00 45.57 5.24
839 3016 1.226435 GTACGTCAGAGGAGCTGCG 60.226 63.158 0.00 0.00 44.52 5.18
840 3017 1.226435 CGTACGTCAGAGGAGCTGC 60.226 63.158 7.22 0.00 44.52 5.25
841 3018 1.429825 CCGTACGTCAGAGGAGCTG 59.570 63.158 15.21 0.00 46.31 4.24
842 3019 2.408241 GCCGTACGTCAGAGGAGCT 61.408 63.158 15.21 0.00 0.00 4.09
843 3020 2.102553 GCCGTACGTCAGAGGAGC 59.897 66.667 15.21 3.74 0.00 4.70
844 3021 2.403987 CGCCGTACGTCAGAGGAG 59.596 66.667 15.21 0.00 36.87 3.69
845 3022 3.807538 GCGCCGTACGTCAGAGGA 61.808 66.667 15.21 0.00 46.11 3.71
846 3023 4.111016 TGCGCCGTACGTCAGAGG 62.111 66.667 15.21 0.00 46.11 3.69
847 3024 2.874780 GTGCGCCGTACGTCAGAG 60.875 66.667 15.21 1.85 46.11 3.35
848 3025 3.318539 GAGTGCGCCGTACGTCAGA 62.319 63.158 15.21 0.00 46.11 3.27
849 3026 2.874780 GAGTGCGCCGTACGTCAG 60.875 66.667 15.21 6.03 46.11 3.51
850 3027 4.746951 CGAGTGCGCCGTACGTCA 62.747 66.667 15.21 6.28 46.11 4.35
863 3040 1.213013 GATCCACACGTCAGCGAGT 59.787 57.895 0.00 0.00 42.28 4.18
864 3041 1.517257 GGATCCACACGTCAGCGAG 60.517 63.158 6.95 0.00 42.00 5.03
865 3042 2.571757 GGATCCACACGTCAGCGA 59.428 61.111 6.95 0.00 42.00 4.93
866 3043 2.880879 CGGATCCACACGTCAGCG 60.881 66.667 13.41 0.00 44.93 5.18
867 3044 2.509336 CCGGATCCACACGTCAGC 60.509 66.667 13.41 0.00 0.00 4.26
868 3045 1.153823 GTCCGGATCCACACGTCAG 60.154 63.158 7.81 0.00 0.00 3.51
869 3046 2.642254 GGTCCGGATCCACACGTCA 61.642 63.158 7.81 0.00 0.00 4.35
870 3047 2.183555 GGTCCGGATCCACACGTC 59.816 66.667 7.81 0.00 0.00 4.34
871 3048 3.387947 GGGTCCGGATCCACACGT 61.388 66.667 29.68 0.00 0.00 4.49
872 3049 3.387091 TGGGTCCGGATCCACACG 61.387 66.667 33.28 0.00 36.49 4.49
878 3055 4.867599 GACGCGTGGGTCCGGATC 62.868 72.222 20.70 6.88 0.00 3.36
892 3069 3.041940 GACGTTGGGCCACTGACG 61.042 66.667 23.66 23.66 41.00 4.35
893 3070 1.961277 CTGACGTTGGGCCACTGAC 60.961 63.158 5.23 0.00 0.00 3.51
894 3071 2.425592 CTGACGTTGGGCCACTGA 59.574 61.111 5.23 0.00 0.00 3.41
895 3072 2.669569 CCTGACGTTGGGCCACTG 60.670 66.667 5.23 3.70 0.00 3.66
896 3073 3.168528 ACCTGACGTTGGGCCACT 61.169 61.111 5.23 0.00 0.00 4.00
897 3074 2.978010 CACCTGACGTTGGGCCAC 60.978 66.667 5.23 0.00 0.00 5.01
898 3075 4.263572 CCACCTGACGTTGGGCCA 62.264 66.667 0.00 0.00 0.00 5.36
902 3079 3.229156 TACGGCCACCTGACGTTGG 62.229 63.158 2.24 6.95 41.53 3.77
903 3080 2.025418 GTACGGCCACCTGACGTTG 61.025 63.158 2.24 0.00 41.53 4.10
904 3081 2.341176 GTACGGCCACCTGACGTT 59.659 61.111 2.24 0.00 41.53 3.99
905 3082 4.047059 CGTACGGCCACCTGACGT 62.047 66.667 7.57 0.00 43.88 4.34
906 3083 3.958822 GACGTACGGCCACCTGACG 62.959 68.421 21.06 6.95 36.05 4.35
907 3084 2.126189 GACGTACGGCCACCTGAC 60.126 66.667 21.06 0.00 0.00 3.51
908 3085 2.598099 TGACGTACGGCCACCTGA 60.598 61.111 20.48 0.00 0.00 3.86
909 3086 2.126071 CTGACGTACGGCCACCTG 60.126 66.667 20.48 0.00 0.00 4.00
910 3087 3.379445 CCTGACGTACGGCCACCT 61.379 66.667 20.48 0.00 0.00 4.00
911 3088 4.446413 CCCTGACGTACGGCCACC 62.446 72.222 20.48 2.90 0.00 4.61
912 3089 4.446413 CCCCTGACGTACGGCCAC 62.446 72.222 20.48 7.80 0.00 5.01
913 3090 3.968837 ATCCCCTGACGTACGGCCA 62.969 63.158 20.48 14.99 0.00 5.36
914 3091 3.148031 GATCCCCTGACGTACGGCC 62.148 68.421 20.48 10.81 0.00 6.13
915 3092 2.416260 GATCCCCTGACGTACGGC 59.584 66.667 21.06 18.72 0.00 5.68
916 3093 2.842256 CGGATCCCCTGACGTACGG 61.842 68.421 21.06 1.19 0.00 4.02
917 3094 2.719979 CGGATCCCCTGACGTACG 59.280 66.667 15.01 15.01 0.00 3.67
918 3095 3.126528 CCGGATCCCCTGACGTAC 58.873 66.667 6.06 0.00 0.00 3.67
919 3096 2.836360 GCCGGATCCCCTGACGTA 60.836 66.667 5.05 0.00 0.00 3.57
920 3097 4.779733 AGCCGGATCCCCTGACGT 62.780 66.667 5.05 0.00 0.00 4.34
921 3098 3.917760 GAGCCGGATCCCCTGACG 61.918 72.222 9.02 0.00 0.00 4.35
922 3099 3.551407 GGAGCCGGATCCCCTGAC 61.551 72.222 28.96 0.78 32.79 3.51
928 3105 4.996434 CGCATGGGAGCCGGATCC 62.996 72.222 31.09 31.09 38.76 3.36
929 3106 4.241555 ACGCATGGGAGCCGGATC 62.242 66.667 17.76 12.38 0.00 3.36
930 3107 4.241555 GACGCATGGGAGCCGGAT 62.242 66.667 17.76 0.00 0.00 4.18
932 3109 4.776322 TTGACGCATGGGAGCCGG 62.776 66.667 17.76 0.00 0.00 6.13
933 3110 3.499737 GTTGACGCATGGGAGCCG 61.500 66.667 17.76 2.12 0.00 5.52
934 3111 3.134127 GGTTGACGCATGGGAGCC 61.134 66.667 17.76 8.56 0.00 4.70
935 3112 3.134127 GGGTTGACGCATGGGAGC 61.134 66.667 17.76 8.47 0.00 4.70
936 3113 1.303236 TTGGGTTGACGCATGGGAG 60.303 57.895 17.76 0.00 38.62 4.30
937 3114 1.602323 GTTGGGTTGACGCATGGGA 60.602 57.895 17.76 0.00 38.62 4.37
938 3115 2.961768 GTTGGGTTGACGCATGGG 59.038 61.111 8.44 8.44 38.62 4.00
957 3134 0.105039 GGATTCTAGGTCAGGCCACG 59.895 60.000 5.01 0.00 40.61 4.94
1087 3313 1.915614 GCGGCAGAGATGGTGTTGTG 61.916 60.000 0.00 0.00 0.00 3.33
1088 3314 1.672356 GCGGCAGAGATGGTGTTGT 60.672 57.895 0.00 0.00 0.00 3.32
1375 6499 1.515954 GATCTGAACGGCGAAGGGA 59.484 57.895 16.62 6.88 0.00 4.20
1445 6569 3.309410 TGTATACGCGTCGTCATTCACTA 59.691 43.478 18.63 0.00 41.54 2.74
1559 6707 3.704231 ATGATGTCCACGGCCCAGC 62.704 63.158 0.00 0.00 0.00 4.85
1651 6805 3.814577 GCTTCTCAGCGGTAGACAA 57.185 52.632 0.00 0.00 35.91 3.18
1726 6880 1.673337 TCGTCTCCGGCGAGAAGAA 60.673 57.895 9.30 0.35 46.49 2.52
2007 7171 2.159043 AGCATTCACACTACGGATCCAG 60.159 50.000 13.41 4.94 0.00 3.86
2050 7217 6.712095 ACACTCAAAGAGATTATGTTCTGCAA 59.288 34.615 0.31 0.00 33.32 4.08
2222 7401 2.178521 CAAGGTCCGTCGTCTCCG 59.821 66.667 0.00 0.00 0.00 4.63
2330 7512 6.547141 TCAATGAGAACCTTCAACTTCATGTT 59.453 34.615 0.00 0.00 39.92 2.71
2450 7635 7.775053 AGGCATCTAAAGGTTACATTTTTGA 57.225 32.000 0.00 0.85 0.00 2.69
2451 7636 9.573133 CTAAGGCATCTAAAGGTTACATTTTTG 57.427 33.333 0.00 0.00 0.00 2.44
2452 7637 9.528489 TCTAAGGCATCTAAAGGTTACATTTTT 57.472 29.630 0.00 0.00 0.00 1.94
2453 7638 9.528489 TTCTAAGGCATCTAAAGGTTACATTTT 57.472 29.630 0.00 0.00 0.00 1.82
2477 7662 4.338400 GGCCCAGAATTGTACCAATAGTTC 59.662 45.833 0.00 0.00 0.00 3.01
2510 7695 6.239008 GCGGATGAAAATCCAATCTTCCATTA 60.239 38.462 5.64 0.00 40.75 1.90
2533 7718 7.063426 TCAGTGATTCATAGAAAGTTTGTAGCG 59.937 37.037 0.00 0.00 0.00 4.26
2712 8708 1.401552 GCATATTGAAGGCTGAACGCA 59.598 47.619 0.00 0.00 41.67 5.24
2745 8742 5.123186 TCCTTAATCACTACAAAATGCCACG 59.877 40.000 0.00 0.00 0.00 4.94
2774 8771 5.011431 TCACATCTCTGTCAGTGAAATCACT 59.989 40.000 10.22 10.22 45.35 3.41
2786 8783 4.836825 TCCCTCAAATTCACATCTCTGTC 58.163 43.478 0.00 0.00 31.62 3.51
2840 8837 0.249784 TTTACGGCTGGTAACACGCA 60.250 50.000 0.00 0.00 46.17 5.24
2843 8840 4.492791 ACATTTTTACGGCTGGTAACAC 57.507 40.909 0.00 0.00 46.17 3.32
2854 8851 5.296035 GGAATGGAGGGAGTACATTTTTACG 59.704 44.000 0.00 0.00 35.17 3.18
2866 8863 6.410540 GCACTATATTTAGGAATGGAGGGAG 58.589 44.000 0.00 0.00 0.00 4.30
2867 8864 5.046591 CGCACTATATTTAGGAATGGAGGGA 60.047 44.000 0.00 0.00 0.00 4.20
2868 8865 5.178797 CGCACTATATTTAGGAATGGAGGG 58.821 45.833 0.00 0.00 0.00 4.30
2869 8866 5.794894 ACGCACTATATTTAGGAATGGAGG 58.205 41.667 0.00 0.00 0.00 4.30
2872 8869 8.818057 GCTTATACGCACTATATTTAGGAATGG 58.182 37.037 0.00 0.00 0.00 3.16
2873 8870 9.587772 AGCTTATACGCACTATATTTAGGAATG 57.412 33.333 3.83 0.00 0.00 2.67
2875 8872 9.991906 AAAGCTTATACGCACTATATTTAGGAA 57.008 29.630 0.00 0.00 0.00 3.36
2876 8873 9.991906 AAAAGCTTATACGCACTATATTTAGGA 57.008 29.630 0.00 0.00 0.00 2.94
2886 8883 9.765795 AATATCTCTAAAAAGCTTATACGCACT 57.234 29.630 0.00 0.00 0.00 4.40
2888 8885 9.204570 GGAATATCTCTAAAAAGCTTATACGCA 57.795 33.333 0.00 0.00 0.00 5.24
2889 8886 8.373992 CGGAATATCTCTAAAAAGCTTATACGC 58.626 37.037 0.00 0.00 0.00 4.42
2890 8887 8.373992 GCGGAATATCTCTAAAAAGCTTATACG 58.626 37.037 0.00 0.00 0.00 3.06
2891 8888 9.204570 TGCGGAATATCTCTAAAAAGCTTATAC 57.795 33.333 0.00 0.00 0.00 1.47
2892 8889 9.772973 TTGCGGAATATCTCTAAAAAGCTTATA 57.227 29.630 0.00 0.00 0.00 0.98
2893 8890 8.677148 TTGCGGAATATCTCTAAAAAGCTTAT 57.323 30.769 0.00 0.00 0.00 1.73
2894 8891 8.559536 CATTGCGGAATATCTCTAAAAAGCTTA 58.440 33.333 0.40 0.00 0.00 3.09
2895 8892 7.067494 ACATTGCGGAATATCTCTAAAAAGCTT 59.933 33.333 0.40 0.00 0.00 3.74
2896 8893 6.543831 ACATTGCGGAATATCTCTAAAAAGCT 59.456 34.615 0.40 0.00 0.00 3.74
2897 8894 6.729187 ACATTGCGGAATATCTCTAAAAAGC 58.271 36.000 0.40 0.00 0.00 3.51
2898 8895 9.046296 ACTACATTGCGGAATATCTCTAAAAAG 57.954 33.333 0.40 0.00 0.00 2.27
2899 8896 8.826710 CACTACATTGCGGAATATCTCTAAAAA 58.173 33.333 0.40 0.00 0.00 1.94
2900 8897 7.985184 ACACTACATTGCGGAATATCTCTAAAA 59.015 33.333 0.40 0.00 0.00 1.52
2901 8898 7.438160 CACACTACATTGCGGAATATCTCTAAA 59.562 37.037 0.40 0.00 0.00 1.85
2902 8899 6.923508 CACACTACATTGCGGAATATCTCTAA 59.076 38.462 0.40 0.00 0.00 2.10
2903 8900 6.040504 ACACACTACATTGCGGAATATCTCTA 59.959 38.462 0.40 0.00 0.00 2.43
2904 8901 5.163405 ACACACTACATTGCGGAATATCTCT 60.163 40.000 0.40 0.00 0.00 3.10
2905 8902 5.050490 ACACACTACATTGCGGAATATCTC 58.950 41.667 0.40 0.00 0.00 2.75
2906 8903 5.023533 ACACACTACATTGCGGAATATCT 57.976 39.130 0.40 0.00 0.00 1.98
2907 8904 6.868864 AGATACACACTACATTGCGGAATATC 59.131 38.462 0.40 0.00 0.00 1.63
2908 8905 6.759272 AGATACACACTACATTGCGGAATAT 58.241 36.000 0.40 0.00 0.00 1.28
2909 8906 6.156748 AGATACACACTACATTGCGGAATA 57.843 37.500 0.40 0.00 0.00 1.75
2910 8907 5.023533 AGATACACACTACATTGCGGAAT 57.976 39.130 0.00 0.00 0.00 3.01
2911 8908 4.430007 GAGATACACACTACATTGCGGAA 58.570 43.478 0.00 0.00 0.00 4.30
2912 8909 3.181479 GGAGATACACACTACATTGCGGA 60.181 47.826 0.00 0.00 0.00 5.54
2913 8910 3.123804 GGAGATACACACTACATTGCGG 58.876 50.000 0.00 0.00 0.00 5.69
2914 8911 3.123804 GGGAGATACACACTACATTGCG 58.876 50.000 0.00 0.00 0.00 4.85
2915 8912 4.372656 GAGGGAGATACACACTACATTGC 58.627 47.826 0.00 0.00 0.00 3.56
2916 8913 4.202264 GGGAGGGAGATACACACTACATTG 60.202 50.000 0.00 0.00 0.00 2.82
2917 8914 3.967987 GGGAGGGAGATACACACTACATT 59.032 47.826 0.00 0.00 0.00 2.71
2918 8915 3.577919 GGGAGGGAGATACACACTACAT 58.422 50.000 0.00 0.00 0.00 2.29
2919 8916 2.358932 GGGGAGGGAGATACACACTACA 60.359 54.545 0.00 0.00 0.00 2.74
2920 8917 2.317973 GGGGAGGGAGATACACACTAC 58.682 57.143 0.00 0.00 0.00 2.73
2921 8918 1.934480 TGGGGAGGGAGATACACACTA 59.066 52.381 0.00 0.00 0.00 2.74
2922 8919 0.716591 TGGGGAGGGAGATACACACT 59.283 55.000 0.00 0.00 0.00 3.55
2923 8920 1.486726 CTTGGGGAGGGAGATACACAC 59.513 57.143 0.00 0.00 0.00 3.82
2924 8921 1.879575 CTTGGGGAGGGAGATACACA 58.120 55.000 0.00 0.00 0.00 3.72
2925 8922 0.470341 GCTTGGGGAGGGAGATACAC 59.530 60.000 0.00 0.00 0.00 2.90
2926 8923 1.048724 CGCTTGGGGAGGGAGATACA 61.049 60.000 0.00 0.00 40.59 2.29
2927 8924 0.759436 TCGCTTGGGGAGGGAGATAC 60.759 60.000 0.00 0.00 41.87 2.24
2928 8925 1.624188 TCGCTTGGGGAGGGAGATA 59.376 57.895 0.00 0.00 41.87 1.98
2929 8926 2.368594 TCGCTTGGGGAGGGAGAT 59.631 61.111 0.00 0.00 41.87 2.75
2933 8930 0.532115 CAAAAATCGCTTGGGGAGGG 59.468 55.000 0.00 0.00 39.55 4.30
2934 8931 0.532115 CCAAAAATCGCTTGGGGAGG 59.468 55.000 0.00 0.00 39.82 4.30
2935 8932 1.202348 GTCCAAAAATCGCTTGGGGAG 59.798 52.381 2.16 0.00 43.10 4.30
2936 8933 1.253100 GTCCAAAAATCGCTTGGGGA 58.747 50.000 2.16 0.00 43.10 4.81
2937 8934 0.109319 CGTCCAAAAATCGCTTGGGG 60.109 55.000 2.16 0.00 43.10 4.96
2938 8935 0.878416 TCGTCCAAAAATCGCTTGGG 59.122 50.000 2.16 0.00 43.10 4.12
2939 8936 2.697431 TTCGTCCAAAAATCGCTTGG 57.303 45.000 0.00 0.00 44.07 3.61
2940 8937 3.628017 AGTTTCGTCCAAAAATCGCTTG 58.372 40.909 0.00 0.00 0.00 4.01
2941 8938 3.982576 AGTTTCGTCCAAAAATCGCTT 57.017 38.095 0.00 0.00 0.00 4.68
2942 8939 3.187842 GGTAGTTTCGTCCAAAAATCGCT 59.812 43.478 0.00 0.00 0.00 4.93
2943 8940 3.485633 GGTAGTTTCGTCCAAAAATCGC 58.514 45.455 0.00 0.00 0.00 4.58
2944 8941 3.749609 AGGGTAGTTTCGTCCAAAAATCG 59.250 43.478 0.00 0.00 0.00 3.34
2945 8942 4.155462 GGAGGGTAGTTTCGTCCAAAAATC 59.845 45.833 0.00 0.00 38.60 2.17
2946 8943 4.077108 GGAGGGTAGTTTCGTCCAAAAAT 58.923 43.478 0.00 0.00 38.60 1.82
2947 8944 3.479489 GGAGGGTAGTTTCGTCCAAAAA 58.521 45.455 0.00 0.00 38.60 1.94
2948 8945 2.224597 GGGAGGGTAGTTTCGTCCAAAA 60.225 50.000 0.00 0.00 40.00 2.44
2949 8946 1.348696 GGGAGGGTAGTTTCGTCCAAA 59.651 52.381 0.00 0.00 40.00 3.28
2950 8947 0.978907 GGGAGGGTAGTTTCGTCCAA 59.021 55.000 0.00 0.00 40.00 3.53
2951 8948 0.178926 TGGGAGGGTAGTTTCGTCCA 60.179 55.000 0.00 0.00 40.00 4.02
2952 8949 0.248565 GTGGGAGGGTAGTTTCGTCC 59.751 60.000 0.00 0.00 38.17 4.79
2953 8950 0.248565 GGTGGGAGGGTAGTTTCGTC 59.751 60.000 0.00 0.00 0.00 4.20
2954 8951 0.472352 TGGTGGGAGGGTAGTTTCGT 60.472 55.000 0.00 0.00 0.00 3.85
2955 8952 0.688487 TTGGTGGGAGGGTAGTTTCG 59.312 55.000 0.00 0.00 0.00 3.46
2956 8953 2.511659 GTTTGGTGGGAGGGTAGTTTC 58.488 52.381 0.00 0.00 0.00 2.78
2957 8954 1.146359 GGTTTGGTGGGAGGGTAGTTT 59.854 52.381 0.00 0.00 0.00 2.66
2958 8955 0.775542 GGTTTGGTGGGAGGGTAGTT 59.224 55.000 0.00 0.00 0.00 2.24
2959 8956 0.402272 TGGTTTGGTGGGAGGGTAGT 60.402 55.000 0.00 0.00 0.00 2.73
2960 8957 0.774908 TTGGTTTGGTGGGAGGGTAG 59.225 55.000 0.00 0.00 0.00 3.18
2961 8958 1.133419 GTTTGGTTTGGTGGGAGGGTA 60.133 52.381 0.00 0.00 0.00 3.69
2962 8959 0.397957 GTTTGGTTTGGTGGGAGGGT 60.398 55.000 0.00 0.00 0.00 4.34
2963 8960 0.397816 TGTTTGGTTTGGTGGGAGGG 60.398 55.000 0.00 0.00 0.00 4.30
2964 8961 1.039856 CTGTTTGGTTTGGTGGGAGG 58.960 55.000 0.00 0.00 0.00 4.30
2965 8962 0.389025 GCTGTTTGGTTTGGTGGGAG 59.611 55.000 0.00 0.00 0.00 4.30
2966 8963 1.045911 GGCTGTTTGGTTTGGTGGGA 61.046 55.000 0.00 0.00 0.00 4.37
2967 8964 1.333636 TGGCTGTTTGGTTTGGTGGG 61.334 55.000 0.00 0.00 0.00 4.61
2968 8965 0.104671 CTGGCTGTTTGGTTTGGTGG 59.895 55.000 0.00 0.00 0.00 4.61
2969 8966 0.530431 GCTGGCTGTTTGGTTTGGTG 60.530 55.000 0.00 0.00 0.00 4.17
2970 8967 1.822615 GCTGGCTGTTTGGTTTGGT 59.177 52.632 0.00 0.00 0.00 3.67
2971 8968 1.300080 CGCTGGCTGTTTGGTTTGG 60.300 57.895 0.00 0.00 0.00 3.28
2972 8969 1.950630 GCGCTGGCTGTTTGGTTTG 60.951 57.895 0.00 0.00 35.83 2.93
2973 8970 2.417097 GCGCTGGCTGTTTGGTTT 59.583 55.556 0.00 0.00 35.83 3.27
2974 8971 3.605664 GGCGCTGGCTGTTTGGTT 61.606 61.111 7.64 0.00 39.81 3.67
3004 9001 1.095228 AGAGAGAGAGGCGAGCGAAG 61.095 60.000 0.00 0.00 0.00 3.79
3005 9002 0.678366 AAGAGAGAGAGGCGAGCGAA 60.678 55.000 0.00 0.00 0.00 4.70
3006 9003 1.078072 AAGAGAGAGAGGCGAGCGA 60.078 57.895 0.00 0.00 0.00 4.93
3007 9004 1.355210 GAAGAGAGAGAGGCGAGCG 59.645 63.158 0.00 0.00 0.00 5.03
3008 9005 0.751643 AGGAAGAGAGAGAGGCGAGC 60.752 60.000 0.00 0.00 0.00 5.03
3009 9006 1.762708 AAGGAAGAGAGAGAGGCGAG 58.237 55.000 0.00 0.00 0.00 5.03
3010 9007 3.482436 GATAAGGAAGAGAGAGAGGCGA 58.518 50.000 0.00 0.00 0.00 5.54
3011 9008 2.556622 GGATAAGGAAGAGAGAGAGGCG 59.443 54.545 0.00 0.00 0.00 5.52
3012 9009 2.897326 GGGATAAGGAAGAGAGAGAGGC 59.103 54.545 0.00 0.00 0.00 4.70
3013 9010 4.469469 AGGGATAAGGAAGAGAGAGAGG 57.531 50.000 0.00 0.00 0.00 3.69
3014 9011 4.518970 CGAAGGGATAAGGAAGAGAGAGAG 59.481 50.000 0.00 0.00 0.00 3.20
3015 9012 4.079672 ACGAAGGGATAAGGAAGAGAGAGA 60.080 45.833 0.00 0.00 0.00 3.10
3016 9013 4.211920 ACGAAGGGATAAGGAAGAGAGAG 58.788 47.826 0.00 0.00 0.00 3.20
3017 9014 4.079672 AGACGAAGGGATAAGGAAGAGAGA 60.080 45.833 0.00 0.00 0.00 3.10
3018 9015 4.211920 AGACGAAGGGATAAGGAAGAGAG 58.788 47.826 0.00 0.00 0.00 3.20
3019 9016 4.208746 GAGACGAAGGGATAAGGAAGAGA 58.791 47.826 0.00 0.00 0.00 3.10
3020 9017 3.003897 CGAGACGAAGGGATAAGGAAGAG 59.996 52.174 0.00 0.00 0.00 2.85
3021 9018 2.950309 CGAGACGAAGGGATAAGGAAGA 59.050 50.000 0.00 0.00 0.00 2.87
3022 9019 2.544069 GCGAGACGAAGGGATAAGGAAG 60.544 54.545 0.00 0.00 0.00 3.46
3023 9020 1.407979 GCGAGACGAAGGGATAAGGAA 59.592 52.381 0.00 0.00 0.00 3.36
3024 9021 1.030457 GCGAGACGAAGGGATAAGGA 58.970 55.000 0.00 0.00 0.00 3.36
3025 9022 3.571741 GCGAGACGAAGGGATAAGG 57.428 57.895 0.00 0.00 0.00 2.69
3036 9033 3.488090 GGGAAAAGCCGCGAGACG 61.488 66.667 8.23 0.00 43.15 4.18
3037 9034 2.358247 TGGGAAAAGCCGCGAGAC 60.358 61.111 8.23 0.00 37.63 3.36
3038 9035 2.358247 GTGGGAAAAGCCGCGAGA 60.358 61.111 8.23 0.00 37.63 4.04
3039 9036 3.431725 GGTGGGAAAAGCCGCGAG 61.432 66.667 8.23 0.00 37.63 5.03
3040 9037 3.948719 AGGTGGGAAAAGCCGCGA 61.949 61.111 8.23 0.00 37.63 5.87
3041 9038 3.737172 CAGGTGGGAAAAGCCGCG 61.737 66.667 0.00 0.00 37.63 6.46
3042 9039 4.056125 GCAGGTGGGAAAAGCCGC 62.056 66.667 0.00 0.00 37.63 6.53
3043 9040 3.373565 GGCAGGTGGGAAAAGCCG 61.374 66.667 0.00 0.00 37.63 5.52
3044 9041 1.979155 GAGGCAGGTGGGAAAAGCC 60.979 63.158 0.00 0.00 45.54 4.35
3045 9042 2.335712 CGAGGCAGGTGGGAAAAGC 61.336 63.158 0.00 0.00 0.00 3.51
3046 9043 2.335712 GCGAGGCAGGTGGGAAAAG 61.336 63.158 0.00 0.00 0.00 2.27
3047 9044 2.282180 GCGAGGCAGGTGGGAAAA 60.282 61.111 0.00 0.00 0.00 2.29
3048 9045 4.344865 GGCGAGGCAGGTGGGAAA 62.345 66.667 0.00 0.00 0.00 3.13
3055 9052 4.899239 GATCGGTGGCGAGGCAGG 62.899 72.222 0.00 0.00 0.00 4.85
3056 9053 3.842923 AGATCGGTGGCGAGGCAG 61.843 66.667 0.00 0.00 0.00 4.85
3057 9054 4.147449 CAGATCGGTGGCGAGGCA 62.147 66.667 0.00 0.00 0.00 4.75
3059 9056 4.899239 GGCAGATCGGTGGCGAGG 62.899 72.222 0.00 0.00 32.71 4.63
3060 9057 4.147449 TGGCAGATCGGTGGCGAG 62.147 66.667 4.39 0.00 45.86 5.03
3061 9058 4.451150 GTGGCAGATCGGTGGCGA 62.451 66.667 4.39 0.00 45.86 5.54
3063 9060 4.101448 AGGTGGCAGATCGGTGGC 62.101 66.667 1.92 1.92 43.25 5.01
3064 9061 2.187946 GAGGTGGCAGATCGGTGG 59.812 66.667 0.00 0.00 0.00 4.61
3065 9062 1.153489 CAGAGGTGGCAGATCGGTG 60.153 63.158 0.00 0.00 0.00 4.94
3066 9063 1.194781 AACAGAGGTGGCAGATCGGT 61.195 55.000 0.00 0.00 0.00 4.69
3067 9064 0.742281 CAACAGAGGTGGCAGATCGG 60.742 60.000 0.00 0.00 0.00 4.18
3068 9065 1.364626 GCAACAGAGGTGGCAGATCG 61.365 60.000 0.00 0.00 43.83 3.69
3069 9066 2.475666 GCAACAGAGGTGGCAGATC 58.524 57.895 0.00 0.00 43.83 2.75
3070 9067 4.730487 GCAACAGAGGTGGCAGAT 57.270 55.556 0.00 0.00 43.83 2.90
3074 9071 1.028868 GGATCAGCAACAGAGGTGGC 61.029 60.000 0.00 0.00 44.80 5.01
3075 9072 0.393537 GGGATCAGCAACAGAGGTGG 60.394 60.000 0.00 0.00 37.59 4.61
3076 9073 0.617413 AGGGATCAGCAACAGAGGTG 59.383 55.000 0.00 0.00 38.31 4.00
3077 9074 1.834263 GTAGGGATCAGCAACAGAGGT 59.166 52.381 0.00 0.00 0.00 3.85
3078 9075 1.139853 GGTAGGGATCAGCAACAGAGG 59.860 57.143 0.00 0.00 0.00 3.69
3079 9076 2.102252 GAGGTAGGGATCAGCAACAGAG 59.898 54.545 0.00 0.00 0.00 3.35
3080 9077 2.111384 GAGGTAGGGATCAGCAACAGA 58.889 52.381 0.00 0.00 0.00 3.41
3081 9078 1.139853 GGAGGTAGGGATCAGCAACAG 59.860 57.143 0.00 0.00 0.00 3.16
3082 9079 1.204146 GGAGGTAGGGATCAGCAACA 58.796 55.000 0.00 0.00 0.00 3.33
3083 9080 1.204146 TGGAGGTAGGGATCAGCAAC 58.796 55.000 0.00 0.00 0.00 4.17
3084 9081 2.173356 CAATGGAGGTAGGGATCAGCAA 59.827 50.000 0.00 0.00 0.00 3.91
3085 9082 1.770658 CAATGGAGGTAGGGATCAGCA 59.229 52.381 0.00 0.00 0.00 4.41
3086 9083 1.544314 GCAATGGAGGTAGGGATCAGC 60.544 57.143 0.00 0.00 0.00 4.26
3087 9084 1.270518 CGCAATGGAGGTAGGGATCAG 60.271 57.143 0.00 0.00 0.00 2.90
3088 9085 0.758734 CGCAATGGAGGTAGGGATCA 59.241 55.000 0.00 0.00 0.00 2.92
3089 9086 1.048601 TCGCAATGGAGGTAGGGATC 58.951 55.000 0.00 0.00 0.00 3.36
3090 9087 0.759346 GTCGCAATGGAGGTAGGGAT 59.241 55.000 0.00 0.00 0.00 3.85
3091 9088 0.616395 TGTCGCAATGGAGGTAGGGA 60.616 55.000 0.00 0.00 0.00 4.20
3092 9089 0.251916 TTGTCGCAATGGAGGTAGGG 59.748 55.000 0.00 0.00 0.00 3.53
3093 9090 1.338674 TGTTGTCGCAATGGAGGTAGG 60.339 52.381 0.00 0.00 0.00 3.18
3094 9091 1.732259 GTGTTGTCGCAATGGAGGTAG 59.268 52.381 0.00 0.00 0.00 3.18
3095 9092 1.070914 TGTGTTGTCGCAATGGAGGTA 59.929 47.619 0.00 0.00 0.00 3.08
3096 9093 0.179032 TGTGTTGTCGCAATGGAGGT 60.179 50.000 0.00 0.00 0.00 3.85
3097 9094 0.518636 CTGTGTTGTCGCAATGGAGG 59.481 55.000 0.00 0.00 33.51 4.30
3098 9095 1.229428 ACTGTGTTGTCGCAATGGAG 58.771 50.000 0.00 0.00 33.51 3.86
3099 9096 2.036604 TCTACTGTGTTGTCGCAATGGA 59.963 45.455 0.00 0.00 33.51 3.41
3100 9097 2.412870 TCTACTGTGTTGTCGCAATGG 58.587 47.619 0.00 0.00 33.51 3.16
3101 9098 3.241773 CGATCTACTGTGTTGTCGCAATG 60.242 47.826 0.00 0.00 33.51 2.82
3102 9099 2.923655 CGATCTACTGTGTTGTCGCAAT 59.076 45.455 0.00 0.00 33.51 3.56
3103 9100 2.030628 TCGATCTACTGTGTTGTCGCAA 60.031 45.455 0.00 0.00 33.51 4.85
3104 9101 1.538075 TCGATCTACTGTGTTGTCGCA 59.462 47.619 0.00 0.00 0.00 5.10
3105 9102 2.177977 CTCGATCTACTGTGTTGTCGC 58.822 52.381 0.00 0.00 0.00 5.19
3106 9103 3.473093 ACTCGATCTACTGTGTTGTCG 57.527 47.619 0.00 0.00 0.00 4.35
3107 9104 3.365220 GCAACTCGATCTACTGTGTTGTC 59.635 47.826 10.41 2.03 37.62 3.18
3108 9105 3.005897 AGCAACTCGATCTACTGTGTTGT 59.994 43.478 10.41 0.00 37.62 3.32
3109 9106 3.579709 AGCAACTCGATCTACTGTGTTG 58.420 45.455 5.75 5.75 38.13 3.33
3110 9107 3.944055 AGCAACTCGATCTACTGTGTT 57.056 42.857 0.00 0.00 0.00 3.32
3111 9108 3.508012 AGAAGCAACTCGATCTACTGTGT 59.492 43.478 0.00 0.00 0.00 3.72
3112 9109 4.103365 AGAAGCAACTCGATCTACTGTG 57.897 45.455 0.00 0.00 0.00 3.66
3113 9110 4.336993 CCTAGAAGCAACTCGATCTACTGT 59.663 45.833 0.00 0.00 0.00 3.55
3114 9111 4.791411 GCCTAGAAGCAACTCGATCTACTG 60.791 50.000 0.00 0.00 0.00 2.74
3115 9112 3.316868 GCCTAGAAGCAACTCGATCTACT 59.683 47.826 0.00 0.00 0.00 2.57
3116 9113 3.066900 TGCCTAGAAGCAACTCGATCTAC 59.933 47.826 0.00 0.00 40.56 2.59
3117 9114 3.288092 TGCCTAGAAGCAACTCGATCTA 58.712 45.455 0.00 0.00 40.56 1.98
3118 9115 2.103373 TGCCTAGAAGCAACTCGATCT 58.897 47.619 0.00 0.00 40.56 2.75
3119 9116 2.586258 TGCCTAGAAGCAACTCGATC 57.414 50.000 0.00 0.00 40.56 3.69
3127 9124 1.604378 GCCCTCTTGCCTAGAAGCA 59.396 57.895 0.00 0.00 42.17 3.91
3128 9125 4.549793 GCCCTCTTGCCTAGAAGC 57.450 61.111 0.00 0.00 30.91 3.86
3136 9133 4.785453 CCACCTCGGCCCTCTTGC 62.785 72.222 0.00 0.00 0.00 4.01
3137 9134 3.003173 TCCACCTCGGCCCTCTTG 61.003 66.667 0.00 0.00 33.14 3.02
3138 9135 3.003763 GTCCACCTCGGCCCTCTT 61.004 66.667 0.00 0.00 33.14 2.85
3146 9143 3.812019 CCTCGTCCGTCCACCTCG 61.812 72.222 0.00 0.00 0.00 4.63
3147 9144 2.675772 ACCTCGTCCGTCCACCTC 60.676 66.667 0.00 0.00 0.00 3.85
3148 9145 2.989824 CACCTCGTCCGTCCACCT 60.990 66.667 0.00 0.00 0.00 4.00
3149 9146 4.736896 GCACCTCGTCCGTCCACC 62.737 72.222 0.00 0.00 0.00 4.61
3150 9147 3.681835 AGCACCTCGTCCGTCCAC 61.682 66.667 0.00 0.00 0.00 4.02
3151 9148 3.680786 CAGCACCTCGTCCGTCCA 61.681 66.667 0.00 0.00 0.00 4.02
3153 9150 4.357947 TGCAGCACCTCGTCCGTC 62.358 66.667 0.00 0.00 0.00 4.79
3154 9151 4.664677 GTGCAGCACCTCGTCCGT 62.665 66.667 15.27 0.00 0.00 4.69
3155 9152 4.662961 TGTGCAGCACCTCGTCCG 62.663 66.667 23.06 0.00 32.73 4.79
3156 9153 1.237285 ATTTGTGCAGCACCTCGTCC 61.237 55.000 23.06 0.00 32.73 4.79
3157 9154 0.166814 GATTTGTGCAGCACCTCGTC 59.833 55.000 23.06 11.57 32.73 4.20
3158 9155 1.568612 CGATTTGTGCAGCACCTCGT 61.569 55.000 23.06 6.31 32.73 4.18
3159 9156 1.133253 CGATTTGTGCAGCACCTCG 59.867 57.895 23.06 21.73 32.73 4.63
3160 9157 1.503542 CCGATTTGTGCAGCACCTC 59.496 57.895 23.06 14.94 32.73 3.85
3161 9158 2.629656 GCCGATTTGTGCAGCACCT 61.630 57.895 23.06 7.56 32.73 4.00
3162 9159 2.126346 GCCGATTTGTGCAGCACC 60.126 61.111 23.06 6.26 32.73 5.01
3163 9160 1.005294 CTTGCCGATTTGTGCAGCAC 61.005 55.000 19.37 19.37 38.95 4.40
3164 9161 1.286570 CTTGCCGATTTGTGCAGCA 59.713 52.632 0.00 0.00 38.95 4.41
3165 9162 2.090524 GCTTGCCGATTTGTGCAGC 61.091 57.895 0.00 0.00 38.95 5.25
3166 9163 1.798725 CGCTTGCCGATTTGTGCAG 60.799 57.895 0.00 0.00 38.95 4.41
3167 9164 2.254951 CGCTTGCCGATTTGTGCA 59.745 55.556 0.00 0.00 40.02 4.57
3168 9165 2.504681 CCGCTTGCCGATTTGTGC 60.505 61.111 0.00 0.00 40.02 4.57
3169 9166 2.179018 CCCGCTTGCCGATTTGTG 59.821 61.111 0.00 0.00 40.02 3.33
3170 9167 2.033448 TCCCGCTTGCCGATTTGT 59.967 55.556 0.00 0.00 40.02 2.83
3171 9168 2.793946 CTCCCGCTTGCCGATTTG 59.206 61.111 0.00 0.00 40.02 2.32
3172 9169 3.134127 GCTCCCGCTTGCCGATTT 61.134 61.111 0.00 0.00 40.02 2.17
3173 9170 4.101448 AGCTCCCGCTTGCCGATT 62.101 61.111 0.00 0.00 46.47 3.34
3204 9201 4.164664 TCCGTGCGGCGTACTACG 62.165 66.667 24.78 20.13 45.88 3.51
3205 9202 2.277756 CTCCGTGCGGCGTACTAC 60.278 66.667 24.78 10.51 39.32 2.73
3206 9203 3.511595 CCTCCGTGCGGCGTACTA 61.512 66.667 24.78 12.44 39.32 1.82
3220 9217 2.435059 GTGTTGGAGCTCGCCCTC 60.435 66.667 7.83 0.00 0.00 4.30
3221 9218 4.379243 CGTGTTGGAGCTCGCCCT 62.379 66.667 7.83 0.00 0.00 5.19
3222 9219 4.681978 ACGTGTTGGAGCTCGCCC 62.682 66.667 7.83 0.00 0.00 6.13
3223 9220 3.414700 CACGTGTTGGAGCTCGCC 61.415 66.667 7.58 0.00 0.00 5.54
3224 9221 1.891060 CTTCACGTGTTGGAGCTCGC 61.891 60.000 16.51 1.18 0.00 5.03
3225 9222 2.145225 CTTCACGTGTTGGAGCTCG 58.855 57.895 16.51 0.00 0.00 5.03
3229 9226 1.143305 CTGAGCTTCACGTGTTGGAG 58.857 55.000 16.51 10.48 33.17 3.86
3230 9227 0.464036 ACTGAGCTTCACGTGTTGGA 59.536 50.000 16.51 0.00 0.00 3.53
3231 9228 0.583438 CACTGAGCTTCACGTGTTGG 59.417 55.000 16.51 8.01 0.00 3.77
3232 9229 0.583438 CCACTGAGCTTCACGTGTTG 59.417 55.000 16.51 10.56 0.00 3.33
3233 9230 1.160329 GCCACTGAGCTTCACGTGTT 61.160 55.000 16.51 0.00 0.00 3.32
3234 9231 1.595382 GCCACTGAGCTTCACGTGT 60.595 57.895 16.51 0.00 0.00 4.49
3235 9232 1.595109 TGCCACTGAGCTTCACGTG 60.595 57.895 9.94 9.94 0.00 4.49
3236 9233 1.595382 GTGCCACTGAGCTTCACGT 60.595 57.895 0.00 0.00 0.00 4.49
3237 9234 1.563435 CTGTGCCACTGAGCTTCACG 61.563 60.000 0.00 0.00 0.00 4.35
3238 9235 0.250038 TCTGTGCCACTGAGCTTCAC 60.250 55.000 0.00 0.00 0.00 3.18
3239 9236 0.034476 CTCTGTGCCACTGAGCTTCA 59.966 55.000 17.21 0.00 37.37 3.02
3240 9237 2.838286 CTCTGTGCCACTGAGCTTC 58.162 57.895 17.21 0.00 37.37 3.86
3244 9241 1.375652 CCTGCTCTGTGCCACTGAG 60.376 63.158 22.99 22.99 44.09 3.35
3245 9242 1.699054 AACCTGCTCTGTGCCACTGA 61.699 55.000 4.29 4.29 42.00 3.41
3246 9243 1.228063 AACCTGCTCTGTGCCACTG 60.228 57.895 0.00 0.00 42.00 3.66
3247 9244 1.072159 GAACCTGCTCTGTGCCACT 59.928 57.895 0.00 0.00 42.00 4.00
3248 9245 1.227943 TGAACCTGCTCTGTGCCAC 60.228 57.895 0.00 0.00 42.00 5.01
3249 9246 1.227943 GTGAACCTGCTCTGTGCCA 60.228 57.895 0.00 0.00 42.00 4.92
3250 9247 1.968540 GGTGAACCTGCTCTGTGCC 60.969 63.158 0.00 0.00 42.00 5.01
3251 9248 1.227943 TGGTGAACCTGCTCTGTGC 60.228 57.895 0.37 0.00 43.25 4.57
3252 9249 2.924185 CTGGTGAACCTGCTCTGTG 58.076 57.895 0.37 0.00 36.82 3.66
3259 9256 1.601759 CCTGTGGCTGGTGAACCTG 60.602 63.158 0.37 1.34 37.93 4.00
3260 9257 1.770110 TCCTGTGGCTGGTGAACCT 60.770 57.895 0.37 0.00 36.82 3.50
3261 9258 1.302832 CTCCTGTGGCTGGTGAACC 60.303 63.158 0.00 0.00 0.00 3.62
3262 9259 1.968540 GCTCCTGTGGCTGGTGAAC 60.969 63.158 0.00 0.00 0.00 3.18
3263 9260 2.116983 GAGCTCCTGTGGCTGGTGAA 62.117 60.000 0.87 0.00 40.40 3.18
3264 9261 2.527624 AGCTCCTGTGGCTGGTGA 60.528 61.111 0.00 0.00 38.73 4.02
3265 9262 2.046507 GAGCTCCTGTGGCTGGTG 60.047 66.667 0.87 0.00 40.40 4.17
3266 9263 3.325753 GGAGCTCCTGTGGCTGGT 61.326 66.667 26.25 0.00 40.40 4.00
3267 9264 3.324930 TGGAGCTCCTGTGGCTGG 61.325 66.667 32.28 0.00 40.40 4.85
3268 9265 2.268280 CTGGAGCTCCTGTGGCTG 59.732 66.667 32.28 10.52 40.40 4.85
3269 9266 2.203907 ACTGGAGCTCCTGTGGCT 60.204 61.111 36.29 17.60 44.92 4.75
3280 9277 3.108289 CGCGTGCTCACACTGGAG 61.108 66.667 0.00 0.00 45.10 3.86
3283 9280 4.360027 GTGCGCGTGCTCACACTG 62.360 66.667 23.16 0.00 45.10 3.66
3296 9293 4.833561 CGTTGATGCTCGCGTGCG 62.834 66.667 25.83 8.14 41.35 5.34
3297 9294 4.505217 CCGTTGATGCTCGCGTGC 62.505 66.667 25.10 25.10 0.00 5.34
3298 9295 3.853330 CCCGTTGATGCTCGCGTG 61.853 66.667 5.77 4.44 0.00 5.34
3302 9299 3.197790 CTGCCCCGTTGATGCTCG 61.198 66.667 0.00 0.00 0.00 5.03
3303 9300 1.817099 CTCTGCCCCGTTGATGCTC 60.817 63.158 0.00 0.00 0.00 4.26
3304 9301 2.270205 CTCTGCCCCGTTGATGCT 59.730 61.111 0.00 0.00 0.00 3.79
3305 9302 3.512516 GCTCTGCCCCGTTGATGC 61.513 66.667 0.00 0.00 0.00 3.91
3306 9303 1.452651 ATGCTCTGCCCCGTTGATG 60.453 57.895 0.00 0.00 0.00 3.07
3307 9304 1.452651 CATGCTCTGCCCCGTTGAT 60.453 57.895 0.00 0.00 0.00 2.57
3308 9305 2.046023 CATGCTCTGCCCCGTTGA 60.046 61.111 0.00 0.00 0.00 3.18
3309 9306 1.926511 GAACATGCTCTGCCCCGTTG 61.927 60.000 0.00 0.00 0.00 4.10
3310 9307 1.675641 GAACATGCTCTGCCCCGTT 60.676 57.895 0.00 0.00 0.00 4.44
3311 9308 2.045926 GAACATGCTCTGCCCCGT 60.046 61.111 0.00 0.00 0.00 5.28
3312 9309 1.817099 GAGAACATGCTCTGCCCCG 60.817 63.158 2.67 0.00 32.16 5.73
3313 9310 1.452833 GGAGAACATGCTCTGCCCC 60.453 63.158 2.67 0.00 35.26 5.80
3314 9311 1.028868 GTGGAGAACATGCTCTGCCC 61.029 60.000 14.19 6.11 33.10 5.36
3315 9312 1.028868 GGTGGAGAACATGCTCTGCC 61.029 60.000 14.19 10.36 33.10 4.85
3316 9313 1.364626 CGGTGGAGAACATGCTCTGC 61.365 60.000 10.43 10.43 35.26 4.26
3317 9314 0.247460 TCGGTGGAGAACATGCTCTG 59.753 55.000 2.67 0.00 35.26 3.35
3318 9315 0.247736 GTCGGTGGAGAACATGCTCT 59.752 55.000 0.00 0.00 35.26 4.09
3319 9316 1.078759 CGTCGGTGGAGAACATGCTC 61.079 60.000 0.00 0.00 0.00 4.26
3320 9317 1.079819 CGTCGGTGGAGAACATGCT 60.080 57.895 0.00 0.00 0.00 3.79
3321 9318 2.100631 CCGTCGGTGGAGAACATGC 61.101 63.158 2.08 0.00 0.00 4.06
3322 9319 1.447838 CCCGTCGGTGGAGAACATG 60.448 63.158 11.06 0.00 0.00 3.21
3323 9320 2.656069 CCCCGTCGGTGGAGAACAT 61.656 63.158 11.06 0.00 0.00 2.71
3324 9321 3.307906 CCCCGTCGGTGGAGAACA 61.308 66.667 11.06 0.00 0.00 3.18
3325 9322 4.078516 CCCCCGTCGGTGGAGAAC 62.079 72.222 7.03 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.