Multiple sequence alignment - TraesCS4B01G387900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G387900 chr4B 100.000 5037 0 0 1 5037 665412551 665407515 0.000000e+00 9302.0
1 TraesCS4B01G387900 chr4B 83.064 1175 190 8 2957 4126 650109126 650107956 0.000000e+00 1059.0
2 TraesCS4B01G387900 chr4B 82.935 1172 197 3 2957 4126 650038147 650036977 0.000000e+00 1053.0
3 TraesCS4B01G387900 chr4B 83.059 1092 177 7 2957 4044 650170682 650169595 0.000000e+00 985.0
4 TraesCS4B01G387900 chr4B 81.802 1121 192 10 2931 4045 667569781 667568667 0.000000e+00 929.0
5 TraesCS4B01G387900 chr4B 94.146 615 26 3 1775 2389 59189814 59190418 0.000000e+00 928.0
6 TraesCS4B01G387900 chr4B 94.146 615 26 1 1775 2389 629957895 629957291 0.000000e+00 928.0
7 TraesCS4B01G387900 chr4B 90.705 667 48 8 1015 1680 667572892 667572239 0.000000e+00 876.0
8 TraesCS4B01G387900 chr4B 80.687 1077 184 13 2958 4032 650579363 650580417 0.000000e+00 815.0
9 TraesCS4B01G387900 chr4B 86.992 738 74 12 948 1682 649837100 649836382 0.000000e+00 811.0
10 TraesCS4B01G387900 chr4B 89.759 166 16 1 281 445 60366712 60366877 1.420000e-50 211.0
11 TraesCS4B01G387900 chrUn 93.522 1729 89 12 2795 4505 108498969 108500692 0.000000e+00 2551.0
12 TraesCS4B01G387900 chrUn 93.971 763 34 6 954 1714 108497630 108498382 0.000000e+00 1144.0
13 TraesCS4B01G387900 chrUn 83.242 1092 175 7 2957 4044 350361765 350360678 0.000000e+00 996.0
14 TraesCS4B01G387900 chrUn 81.362 1116 196 10 2938 4045 30088183 30089294 0.000000e+00 898.0
15 TraesCS4B01G387900 chrUn 89.954 657 54 4 1026 1682 30086966 30087610 0.000000e+00 837.0
16 TraesCS4B01G387900 chrUn 88.406 690 65 7 996 1682 350362727 350362050 0.000000e+00 817.0
17 TraesCS4B01G387900 chrUn 85.519 366 31 13 2443 2798 108498407 108498760 3.710000e-96 363.0
18 TraesCS4B01G387900 chrUn 88.487 304 30 2 4494 4792 108525332 108525635 3.710000e-96 363.0
19 TraesCS4B01G387900 chrUn 86.018 329 17 15 656 955 108497269 108497597 4.860000e-85 326.0
20 TraesCS4B01G387900 chrUn 96.316 190 4 1 92 281 108496797 108496983 4.900000e-80 309.0
21 TraesCS4B01G387900 chrUn 93.529 170 7 1 423 592 108496990 108497155 3.010000e-62 250.0
22 TraesCS4B01G387900 chrUn 89.764 127 9 2 4822 4948 108526629 108526751 5.220000e-35 159.0
23 TraesCS4B01G387900 chrUn 91.463 82 7 0 1 82 108496527 108496608 4.120000e-21 113.0
24 TraesCS4B01G387900 chr6D 85.046 1090 151 7 2959 4045 433111398 433112478 0.000000e+00 1099.0
25 TraesCS4B01G387900 chr6D 88.872 656 61 6 1026 1681 433110593 433111236 0.000000e+00 797.0
26 TraesCS4B01G387900 chr4D 83.036 1179 194 5 2943 4119 503919933 503918759 0.000000e+00 1064.0
27 TraesCS4B01G387900 chr4D 89.420 690 58 8 996 1682 503920983 503920306 0.000000e+00 856.0
28 TraesCS4B01G387900 chr4D 87.412 707 69 10 982 1682 504043286 504043978 0.000000e+00 795.0
29 TraesCS4B01G387900 chr4D 84.615 234 26 7 2435 2667 428481823 428482047 1.820000e-54 224.0
30 TraesCS4B01G387900 chr4D 88.235 51 6 0 4414 4464 503968243 503968293 1.510000e-05 62.1
31 TraesCS4B01G387900 chr6B 94.507 619 24 1 1775 2393 21064010 21063402 0.000000e+00 946.0
32 TraesCS4B01G387900 chr6B 88.006 617 63 7 1775 2387 194423526 194422917 0.000000e+00 719.0
33 TraesCS4B01G387900 chr6B 95.238 147 7 0 281 427 227035762 227035908 3.030000e-57 233.0
34 TraesCS4B01G387900 chr6B 91.139 158 12 2 281 437 693948893 693949049 3.950000e-51 213.0
35 TraesCS4B01G387900 chr6B 84.615 78 10 2 4459 4534 135314657 135314580 5.410000e-10 76.8
36 TraesCS4B01G387900 chr1B 94.507 619 24 1 1775 2393 269218298 269218906 0.000000e+00 946.0
37 TraesCS4B01G387900 chr1B 95.238 147 7 0 281 427 308509659 308509805 3.030000e-57 233.0
38 TraesCS4B01G387900 chr1B 92.617 149 11 0 279 427 144729962 144729814 1.100000e-51 215.0
39 TraesCS4B01G387900 chr1B 81.897 232 29 9 2439 2667 319139234 319139455 3.100000e-42 183.0
40 TraesCS4B01G387900 chr7B 94.444 612 24 2 1775 2386 380710740 380711341 0.000000e+00 933.0
41 TraesCS4B01G387900 chr7B 93.197 147 10 0 281 427 90473067 90473213 3.050000e-52 217.0
42 TraesCS4B01G387900 chr1A 94.300 614 25 3 1775 2388 40891126 40891729 0.000000e+00 931.0
43 TraesCS4B01G387900 chr4A 94.300 614 24 2 1775 2388 21229723 21229121 0.000000e+00 929.0
44 TraesCS4B01G387900 chr5B 93.821 615 28 1 1775 2389 699778402 699779006 0.000000e+00 917.0
45 TraesCS4B01G387900 chr5B 93.878 147 9 0 281 427 160591193 160591047 6.560000e-54 222.0
46 TraesCS4B01G387900 chr3D 93.821 615 28 1 1775 2389 559109446 559108842 0.000000e+00 917.0
47 TraesCS4B01G387900 chr3D 91.042 614 48 3 1775 2388 610424043 610423437 0.000000e+00 822.0
48 TraesCS4B01G387900 chr2B 94.613 594 22 1 1784 2377 156589405 156588822 0.000000e+00 911.0
49 TraesCS4B01G387900 chr2B 93.914 608 26 2 1775 2382 659017681 659018277 0.000000e+00 907.0
50 TraesCS4B01G387900 chr2B 93.878 147 9 0 281 427 616594653 616594799 6.560000e-54 222.0
51 TraesCS4B01G387900 chr2B 92.715 151 10 1 281 430 258196151 258196001 3.050000e-52 217.0
52 TraesCS4B01G387900 chr7A 90.894 615 49 3 1775 2389 497864294 497863687 0.000000e+00 819.0
53 TraesCS4B01G387900 chr5A 90.941 574 52 0 1109 1682 706572691 706573264 0.000000e+00 773.0
54 TraesCS4B01G387900 chr7D 84.810 237 26 7 2432 2667 552186338 552186565 3.920000e-56 230.0
55 TraesCS4B01G387900 chr7D 82.278 237 30 9 2435 2667 564668672 564668444 1.430000e-45 195.0
56 TraesCS4B01G387900 chr1D 85.106 235 24 8 2435 2667 100461850 100462075 3.920000e-56 230.0
57 TraesCS4B01G387900 chr2A 83.556 225 24 9 2439 2660 535290859 535291073 1.110000e-46 198.0
58 TraesCS4B01G387900 chr2D 82.759 232 28 9 2435 2664 627516451 627516672 3.980000e-46 196.0
59 TraesCS4B01G387900 chr2D 82.819 227 25 7 2443 2666 398096245 398096460 1.850000e-44 191.0
60 TraesCS4B01G387900 chr3A 81.818 242 31 11 2428 2667 526862777 526862547 1.850000e-44 191.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G387900 chr4B 665407515 665412551 5036 True 9302.000000 9302 100.000000 1 5037 1 chr4B.!!$R6 5036
1 TraesCS4B01G387900 chr4B 650107956 650109126 1170 True 1059.000000 1059 83.064000 2957 4126 1 chr4B.!!$R4 1169
2 TraesCS4B01G387900 chr4B 650036977 650038147 1170 True 1053.000000 1053 82.935000 2957 4126 1 chr4B.!!$R3 1169
3 TraesCS4B01G387900 chr4B 650169595 650170682 1087 True 985.000000 985 83.059000 2957 4044 1 chr4B.!!$R5 1087
4 TraesCS4B01G387900 chr4B 59189814 59190418 604 False 928.000000 928 94.146000 1775 2389 1 chr4B.!!$F1 614
5 TraesCS4B01G387900 chr4B 629957291 629957895 604 True 928.000000 928 94.146000 1775 2389 1 chr4B.!!$R1 614
6 TraesCS4B01G387900 chr4B 667568667 667572892 4225 True 902.500000 929 86.253500 1015 4045 2 chr4B.!!$R7 3030
7 TraesCS4B01G387900 chr4B 650579363 650580417 1054 False 815.000000 815 80.687000 2958 4032 1 chr4B.!!$F3 1074
8 TraesCS4B01G387900 chr4B 649836382 649837100 718 True 811.000000 811 86.992000 948 1682 1 chr4B.!!$R2 734
9 TraesCS4B01G387900 chrUn 350360678 350362727 2049 True 906.500000 996 85.824000 996 4044 2 chrUn.!!$R1 3048
10 TraesCS4B01G387900 chrUn 30086966 30089294 2328 False 867.500000 898 85.658000 1026 4045 2 chrUn.!!$F1 3019
11 TraesCS4B01G387900 chrUn 108496527 108500692 4165 False 722.285714 2551 91.476857 1 4505 7 chrUn.!!$F2 4504
12 TraesCS4B01G387900 chrUn 108525332 108526751 1419 False 261.000000 363 89.125500 4494 4948 2 chrUn.!!$F3 454
13 TraesCS4B01G387900 chr6D 433110593 433112478 1885 False 948.000000 1099 86.959000 1026 4045 2 chr6D.!!$F1 3019
14 TraesCS4B01G387900 chr4D 503918759 503920983 2224 True 960.000000 1064 86.228000 996 4119 2 chr4D.!!$R1 3123
15 TraesCS4B01G387900 chr4D 504043286 504043978 692 False 795.000000 795 87.412000 982 1682 1 chr4D.!!$F3 700
16 TraesCS4B01G387900 chr6B 21063402 21064010 608 True 946.000000 946 94.507000 1775 2393 1 chr6B.!!$R1 618
17 TraesCS4B01G387900 chr6B 194422917 194423526 609 True 719.000000 719 88.006000 1775 2387 1 chr6B.!!$R3 612
18 TraesCS4B01G387900 chr1B 269218298 269218906 608 False 946.000000 946 94.507000 1775 2393 1 chr1B.!!$F1 618
19 TraesCS4B01G387900 chr7B 380710740 380711341 601 False 933.000000 933 94.444000 1775 2386 1 chr7B.!!$F2 611
20 TraesCS4B01G387900 chr1A 40891126 40891729 603 False 931.000000 931 94.300000 1775 2388 1 chr1A.!!$F1 613
21 TraesCS4B01G387900 chr4A 21229121 21229723 602 True 929.000000 929 94.300000 1775 2388 1 chr4A.!!$R1 613
22 TraesCS4B01G387900 chr5B 699778402 699779006 604 False 917.000000 917 93.821000 1775 2389 1 chr5B.!!$F1 614
23 TraesCS4B01G387900 chr3D 559108842 559109446 604 True 917.000000 917 93.821000 1775 2389 1 chr3D.!!$R1 614
24 TraesCS4B01G387900 chr3D 610423437 610424043 606 True 822.000000 822 91.042000 1775 2388 1 chr3D.!!$R2 613
25 TraesCS4B01G387900 chr2B 156588822 156589405 583 True 911.000000 911 94.613000 1784 2377 1 chr2B.!!$R1 593
26 TraesCS4B01G387900 chr2B 659017681 659018277 596 False 907.000000 907 93.914000 1775 2382 1 chr2B.!!$F2 607
27 TraesCS4B01G387900 chr7A 497863687 497864294 607 True 819.000000 819 90.894000 1775 2389 1 chr7A.!!$R1 614
28 TraesCS4B01G387900 chr5A 706572691 706573264 573 False 773.000000 773 90.941000 1109 1682 1 chr5A.!!$F1 573

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
325 505 0.033503 TATGCACGACTCTGGGAGGA 60.034 55.0 0.00 0.00 33.35 3.71 F
746 1013 0.093535 CAACATCTACGCGTGCAGTG 59.906 55.0 24.59 16.95 0.00 3.66 F
2075 4405 0.527565 CCGAGCAAATCCACCAAAGG 59.472 55.0 0.00 0.00 0.00 3.11 F
2427 4768 0.107703 CCTAGCAATCCCTTGTGCGA 60.108 55.0 0.00 0.00 45.62 5.10 F
3880 6447 0.898789 GGAGTGACCAGGTTCTCGGA 60.899 60.0 15.26 0.00 38.79 4.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1685 2004 0.324923 TGGGCCACGTAGACATAGGT 60.325 55.0 0.00 0.0 0.00 3.08 R
2395 4736 0.114168 TGCTAGGCAATTGGGTTGGT 59.886 50.0 7.72 0.0 38.29 3.67 R
3392 5959 0.403271 AGCATGTCTTCTGGGCTGTT 59.597 50.0 0.00 0.0 32.76 3.16 R
3919 6486 0.678048 AGACGCAAAGCCCCTCAATC 60.678 55.0 0.00 0.0 0.00 2.67 R
4967 8524 0.331954 AGCTGAACGGTAGAGAGGGA 59.668 55.0 0.00 0.0 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.994392 TCTGCATCTACGGTTGAAAGTTC 59.006 43.478 0.00 0.00 0.00 3.01
26 27 4.020928 TGCATCTACGGTTGAAAGTTCCTA 60.021 41.667 0.00 0.00 0.00 2.94
32 33 5.900865 ACGGTTGAAAGTTCCTAACAAAA 57.099 34.783 0.00 0.00 0.00 2.44
33 34 5.886992 ACGGTTGAAAGTTCCTAACAAAAG 58.113 37.500 0.00 0.00 0.00 2.27
64 65 1.459592 GTGAATCGACACTTTGGGACG 59.540 52.381 0.00 0.00 37.73 4.79
66 67 2.028476 TGAATCGACACTTTGGGACGAT 60.028 45.455 1.85 1.85 43.73 3.73
68 69 0.109458 TCGACACTTTGGGACGATCG 60.109 55.000 14.88 14.88 0.00 3.69
82 83 0.861837 CGATCGCCCAAGTAAGATGC 59.138 55.000 0.26 0.00 0.00 3.91
83 84 1.806247 CGATCGCCCAAGTAAGATGCA 60.806 52.381 0.26 0.00 0.00 3.96
85 86 1.667236 TCGCCCAAGTAAGATGCATG 58.333 50.000 2.46 0.00 0.00 4.06
86 87 1.209261 TCGCCCAAGTAAGATGCATGA 59.791 47.619 2.46 0.00 0.00 3.07
87 88 1.600957 CGCCCAAGTAAGATGCATGAG 59.399 52.381 2.46 0.00 0.00 2.90
89 90 3.019564 GCCCAAGTAAGATGCATGAGTT 58.980 45.455 2.46 0.00 0.00 3.01
90 91 3.181493 GCCCAAGTAAGATGCATGAGTTG 60.181 47.826 2.46 8.53 0.00 3.16
171 351 9.214957 TCTTGCTCGTGATTCTTTTCTTAATTA 57.785 29.630 0.00 0.00 0.00 1.40
172 352 9.267096 CTTGCTCGTGATTCTTTTCTTAATTAC 57.733 33.333 0.00 0.00 0.00 1.89
173 353 8.547967 TGCTCGTGATTCTTTTCTTAATTACT 57.452 30.769 0.00 0.00 0.00 2.24
242 422 1.153168 GGGAGCATAAGCAAGCGGA 60.153 57.895 0.00 0.00 45.49 5.54
260 440 7.702348 GCAAGCGGAGAATTAATAAATGTCTTT 59.298 33.333 0.00 0.00 0.00 2.52
281 461 6.584942 TCTTTGCCACTATTATTATACTCGCG 59.415 38.462 0.00 0.00 0.00 5.87
282 462 5.632244 TGCCACTATTATTATACTCGCGA 57.368 39.130 9.26 9.26 0.00 5.87
283 463 6.016213 TGCCACTATTATTATACTCGCGAA 57.984 37.500 11.33 0.00 0.00 4.70
284 464 6.448852 TGCCACTATTATTATACTCGCGAAA 58.551 36.000 11.33 0.88 0.00 3.46
286 466 6.585322 GCCACTATTATTATACTCGCGAAAGT 59.415 38.462 11.33 8.41 0.00 2.66
290 470 8.509690 ACTATTATTATACTCGCGAAAGTGCTA 58.490 33.333 11.33 0.00 42.50 3.49
291 471 6.981379 TTATTATACTCGCGAAAGTGCTAC 57.019 37.500 11.33 0.00 42.50 3.58
292 472 1.823828 ATACTCGCGAAAGTGCTACG 58.176 50.000 11.33 0.00 42.50 3.51
293 473 0.518636 TACTCGCGAAAGTGCTACGT 59.481 50.000 11.33 3.44 42.50 3.57
294 474 0.518636 ACTCGCGAAAGTGCTACGTA 59.481 50.000 11.33 0.00 42.50 3.57
295 475 1.181001 CTCGCGAAAGTGCTACGTAG 58.819 55.000 18.47 18.47 42.50 3.51
296 476 0.179181 TCGCGAAAGTGCTACGTAGG 60.179 55.000 23.47 6.56 42.50 3.18
297 477 1.740043 CGCGAAAGTGCTACGTAGGC 61.740 60.000 23.47 15.70 33.37 3.93
298 478 1.740043 GCGAAAGTGCTACGTAGGCG 61.740 60.000 23.47 0.01 44.93 5.52
299 479 0.179181 CGAAAGTGCTACGTAGGCGA 60.179 55.000 23.47 5.24 42.00 5.54
300 480 1.533338 CGAAAGTGCTACGTAGGCGAT 60.533 52.381 23.47 6.39 42.00 4.58
301 481 1.852895 GAAAGTGCTACGTAGGCGATG 59.147 52.381 23.47 0.00 42.00 3.84
302 482 0.102481 AAGTGCTACGTAGGCGATGG 59.898 55.000 23.47 0.00 42.00 3.51
303 483 0.750546 AGTGCTACGTAGGCGATGGA 60.751 55.000 23.47 0.00 42.00 3.41
304 484 0.314302 GTGCTACGTAGGCGATGGAT 59.686 55.000 23.47 0.00 42.00 3.41
305 485 0.313987 TGCTACGTAGGCGATGGATG 59.686 55.000 23.47 0.00 42.00 3.51
306 486 0.314302 GCTACGTAGGCGATGGATGT 59.686 55.000 23.47 0.00 42.00 3.06
307 487 1.538512 GCTACGTAGGCGATGGATGTA 59.461 52.381 23.47 0.00 42.00 2.29
308 488 2.163815 GCTACGTAGGCGATGGATGTAT 59.836 50.000 23.47 0.00 42.00 2.29
309 489 2.724977 ACGTAGGCGATGGATGTATG 57.275 50.000 0.00 0.00 42.00 2.39
310 490 1.336887 ACGTAGGCGATGGATGTATGC 60.337 52.381 0.00 0.00 42.00 3.14
311 491 1.336795 CGTAGGCGATGGATGTATGCA 60.337 52.381 0.00 0.00 41.33 3.96
312 492 2.069273 GTAGGCGATGGATGTATGCAC 58.931 52.381 0.00 0.00 0.00 4.57
313 493 0.601046 AGGCGATGGATGTATGCACG 60.601 55.000 0.00 0.00 0.00 5.34
314 494 0.599991 GGCGATGGATGTATGCACGA 60.600 55.000 0.00 0.00 0.00 4.35
315 495 0.508641 GCGATGGATGTATGCACGAC 59.491 55.000 0.00 0.00 0.00 4.34
316 496 1.869754 GCGATGGATGTATGCACGACT 60.870 52.381 0.00 0.00 0.00 4.18
317 497 2.054363 CGATGGATGTATGCACGACTC 58.946 52.381 0.00 0.00 0.00 3.36
318 498 2.287849 CGATGGATGTATGCACGACTCT 60.288 50.000 0.00 0.00 0.00 3.24
319 499 2.584492 TGGATGTATGCACGACTCTG 57.416 50.000 0.00 0.00 0.00 3.35
320 500 1.136891 TGGATGTATGCACGACTCTGG 59.863 52.381 0.00 0.00 0.00 3.86
321 501 1.539065 GGATGTATGCACGACTCTGGG 60.539 57.143 0.00 0.00 0.00 4.45
322 502 1.409064 GATGTATGCACGACTCTGGGA 59.591 52.381 0.00 0.00 0.00 4.37
323 503 0.817654 TGTATGCACGACTCTGGGAG 59.182 55.000 0.00 0.00 35.52 4.30
324 504 0.103208 GTATGCACGACTCTGGGAGG 59.897 60.000 0.00 0.00 33.35 4.30
325 505 0.033503 TATGCACGACTCTGGGAGGA 60.034 55.000 0.00 0.00 33.35 3.71
326 506 0.689080 ATGCACGACTCTGGGAGGAT 60.689 55.000 0.00 0.00 33.35 3.24
327 507 1.142748 GCACGACTCTGGGAGGATG 59.857 63.158 0.00 0.00 33.35 3.51
328 508 1.819229 CACGACTCTGGGAGGATGG 59.181 63.158 0.00 0.00 33.35 3.51
329 509 1.381872 ACGACTCTGGGAGGATGGG 60.382 63.158 0.00 0.00 33.35 4.00
330 510 2.801631 CGACTCTGGGAGGATGGGC 61.802 68.421 0.00 0.00 33.35 5.36
331 511 1.690633 GACTCTGGGAGGATGGGCA 60.691 63.158 0.00 0.00 33.35 5.36
332 512 1.692042 ACTCTGGGAGGATGGGCAG 60.692 63.158 0.00 0.00 33.35 4.85
333 513 1.692042 CTCTGGGAGGATGGGCAGT 60.692 63.158 0.00 0.00 0.00 4.40
334 514 1.690633 TCTGGGAGGATGGGCAGTC 60.691 63.158 0.00 0.00 0.00 3.51
335 515 2.692368 TGGGAGGATGGGCAGTCC 60.692 66.667 0.00 0.00 35.94 3.85
345 525 4.479993 GGCAGTCCAGCCGCTGAT 62.480 66.667 22.35 4.46 46.12 2.90
346 526 2.501128 GCAGTCCAGCCGCTGATA 59.499 61.111 22.35 6.62 34.87 2.15
347 527 1.070445 GCAGTCCAGCCGCTGATAT 59.930 57.895 22.35 3.72 34.87 1.63
348 528 1.226686 GCAGTCCAGCCGCTGATATG 61.227 60.000 22.35 16.13 34.87 1.78
349 529 1.070445 AGTCCAGCCGCTGATATGC 59.930 57.895 22.35 6.71 32.44 3.14
359 539 2.376808 GCTGATATGCGCTGGATAGT 57.623 50.000 9.73 0.00 0.00 2.12
360 540 3.510388 GCTGATATGCGCTGGATAGTA 57.490 47.619 9.73 0.00 0.00 1.82
361 541 4.052159 GCTGATATGCGCTGGATAGTAT 57.948 45.455 9.73 0.00 0.00 2.12
362 542 3.801050 GCTGATATGCGCTGGATAGTATG 59.199 47.826 9.73 0.00 0.00 2.39
363 543 3.785486 TGATATGCGCTGGATAGTATGC 58.215 45.455 9.73 0.00 0.00 3.14
364 544 3.195396 TGATATGCGCTGGATAGTATGCA 59.805 43.478 9.73 4.13 34.75 3.96
365 545 2.775911 ATGCGCTGGATAGTATGCAT 57.224 45.000 9.73 3.79 35.81 3.96
366 546 1.799544 TGCGCTGGATAGTATGCATG 58.200 50.000 10.16 2.65 0.00 4.06
367 547 1.344114 TGCGCTGGATAGTATGCATGA 59.656 47.619 10.16 0.00 0.00 3.07
368 548 2.224257 TGCGCTGGATAGTATGCATGAA 60.224 45.455 10.16 0.00 0.00 2.57
369 549 2.158449 GCGCTGGATAGTATGCATGAAC 59.842 50.000 10.16 0.00 0.00 3.18
370 550 2.409715 CGCTGGATAGTATGCATGAACG 59.590 50.000 10.16 3.93 0.00 3.95
371 551 2.738846 GCTGGATAGTATGCATGAACGG 59.261 50.000 10.16 0.11 0.00 4.44
372 552 2.738846 CTGGATAGTATGCATGAACGGC 59.261 50.000 10.16 0.00 0.00 5.68
373 553 2.368548 TGGATAGTATGCATGAACGGCT 59.631 45.455 10.16 0.66 0.00 5.52
374 554 3.181455 TGGATAGTATGCATGAACGGCTT 60.181 43.478 10.16 0.00 0.00 4.35
375 555 3.187227 GGATAGTATGCATGAACGGCTTG 59.813 47.826 10.16 0.00 0.00 4.01
376 556 2.401583 AGTATGCATGAACGGCTTGA 57.598 45.000 10.16 0.00 0.00 3.02
377 557 2.923121 AGTATGCATGAACGGCTTGAT 58.077 42.857 10.16 0.00 0.00 2.57
378 558 4.071961 AGTATGCATGAACGGCTTGATA 57.928 40.909 10.16 0.00 0.00 2.15
379 559 4.645535 AGTATGCATGAACGGCTTGATAT 58.354 39.130 10.16 0.00 0.00 1.63
380 560 3.909776 ATGCATGAACGGCTTGATATG 57.090 42.857 0.00 0.00 0.00 1.78
381 561 2.642427 TGCATGAACGGCTTGATATGT 58.358 42.857 0.00 0.00 0.00 2.29
382 562 2.355444 TGCATGAACGGCTTGATATGTG 59.645 45.455 0.00 0.00 0.00 3.21
383 563 2.855953 GCATGAACGGCTTGATATGTGC 60.856 50.000 0.00 0.00 0.00 4.57
384 564 2.401583 TGAACGGCTTGATATGTGCT 57.598 45.000 0.00 0.00 0.00 4.40
385 565 2.009051 TGAACGGCTTGATATGTGCTG 58.991 47.619 0.00 0.00 38.86 4.41
386 566 2.009774 GAACGGCTTGATATGTGCTGT 58.990 47.619 0.00 0.00 46.74 4.40
387 567 1.656652 ACGGCTTGATATGTGCTGTC 58.343 50.000 0.00 0.00 41.84 3.51
388 568 0.578683 CGGCTTGATATGTGCTGTCG 59.421 55.000 0.00 0.00 0.00 4.35
389 569 1.656652 GGCTTGATATGTGCTGTCGT 58.343 50.000 0.00 0.00 0.00 4.34
390 570 1.328680 GGCTTGATATGTGCTGTCGTG 59.671 52.381 0.00 0.00 0.00 4.35
391 571 1.267732 GCTTGATATGTGCTGTCGTGC 60.268 52.381 0.00 0.00 0.00 5.34
392 572 2.001872 CTTGATATGTGCTGTCGTGCA 58.998 47.619 0.00 0.00 41.05 4.57
398 578 3.717899 TGCTGTCGTGCACAAGTC 58.282 55.556 18.64 7.88 38.12 3.01
399 579 2.237066 TGCTGTCGTGCACAAGTCG 61.237 57.895 18.64 1.94 38.12 4.18
400 580 2.237751 GCTGTCGTGCACAAGTCGT 61.238 57.895 18.64 0.00 33.31 4.34
401 581 1.846648 CTGTCGTGCACAAGTCGTC 59.153 57.895 18.64 0.62 33.31 4.20
402 582 1.548973 CTGTCGTGCACAAGTCGTCC 61.549 60.000 18.64 0.00 33.31 4.79
403 583 1.590525 GTCGTGCACAAGTCGTCCA 60.591 57.895 18.64 0.00 0.00 4.02
404 584 1.590525 TCGTGCACAAGTCGTCCAC 60.591 57.895 18.64 0.00 0.00 4.02
405 585 1.880796 CGTGCACAAGTCGTCCACA 60.881 57.895 18.64 0.00 0.00 4.17
406 586 1.641677 GTGCACAAGTCGTCCACAC 59.358 57.895 13.17 0.00 0.00 3.82
408 588 2.594962 GCACAAGTCGTCCACACGG 61.595 63.158 0.00 0.00 46.70 4.94
423 603 3.597162 CGGCGTCGTGTGTATAGC 58.403 61.111 0.00 0.00 0.00 2.97
424 604 1.226463 CGGCGTCGTGTGTATAGCA 60.226 57.895 0.00 0.00 0.00 3.49
520 700 5.700832 TGTAGGAGAGCAATAATTAATGCGG 59.299 40.000 17.60 0.00 46.98 5.69
523 703 3.221771 AGAGCAATAATTAATGCGGGCA 58.778 40.909 17.60 0.00 46.98 5.36
594 774 2.872858 CCTCTAAAGGAAAGTATGGCGC 59.127 50.000 0.00 0.00 46.67 6.53
595 775 2.540101 CTCTAAAGGAAAGTATGGCGCG 59.460 50.000 0.00 0.00 0.00 6.86
596 776 1.597663 CTAAAGGAAAGTATGGCGCGG 59.402 52.381 8.83 0.00 0.00 6.46
597 777 1.654023 AAAGGAAAGTATGGCGCGGC 61.654 55.000 27.61 27.61 0.00 6.53
598 778 2.813226 AAGGAAAGTATGGCGCGGCA 62.813 55.000 37.91 37.91 0.00 5.69
599 779 2.709475 GAAAGTATGGCGCGGCAG 59.291 61.111 38.11 0.00 0.00 4.85
600 780 3.454960 GAAAGTATGGCGCGGCAGC 62.455 63.158 38.11 30.97 40.74 5.25
601 781 3.976701 AAAGTATGGCGCGGCAGCT 62.977 57.895 38.11 32.49 42.32 4.24
602 782 3.976701 AAGTATGGCGCGGCAGCTT 62.977 57.895 38.11 35.34 42.32 3.74
603 783 3.508840 GTATGGCGCGGCAGCTTT 61.509 61.111 38.11 24.92 42.32 3.51
604 784 2.749839 TATGGCGCGGCAGCTTTT 60.750 55.556 38.11 24.53 42.32 2.27
605 785 2.339556 TATGGCGCGGCAGCTTTTT 61.340 52.632 38.11 23.80 42.32 1.94
645 825 1.971695 GTTGGGCCTGGTGTGCTAC 60.972 63.158 4.53 0.00 0.00 3.58
646 826 3.545124 TTGGGCCTGGTGTGCTACG 62.545 63.158 4.53 0.00 0.00 3.51
647 827 3.702048 GGGCCTGGTGTGCTACGA 61.702 66.667 0.84 0.00 0.00 3.43
648 828 2.584608 GGCCTGGTGTGCTACGAT 59.415 61.111 0.00 0.00 0.00 3.73
649 829 1.682451 GGGCCTGGTGTGCTACGATA 61.682 60.000 0.84 0.00 0.00 2.92
650 830 0.393077 GGCCTGGTGTGCTACGATAT 59.607 55.000 0.00 0.00 0.00 1.63
651 831 1.202651 GGCCTGGTGTGCTACGATATT 60.203 52.381 0.00 0.00 0.00 1.28
652 832 1.867233 GCCTGGTGTGCTACGATATTG 59.133 52.381 0.00 0.00 0.00 1.90
717 984 9.543783 TTTATGATGCATAGCTCATCTCATATC 57.456 33.333 13.33 0.44 40.59 1.63
718 985 6.540438 TGATGCATAGCTCATCTCATATCA 57.460 37.500 13.33 2.61 40.59 2.15
719 986 7.125792 TGATGCATAGCTCATCTCATATCAT 57.874 36.000 13.33 0.00 40.59 2.45
720 987 8.246430 TGATGCATAGCTCATCTCATATCATA 57.754 34.615 13.33 0.00 40.59 2.15
721 988 8.871125 TGATGCATAGCTCATCTCATATCATAT 58.129 33.333 13.33 0.00 40.59 1.78
733 1000 7.662604 TCTCATATCATATGCACACAACATC 57.337 36.000 0.00 0.00 0.00 3.06
746 1013 0.093535 CAACATCTACGCGTGCAGTG 59.906 55.000 24.59 16.95 0.00 3.66
799 1070 4.184629 ACAGCAAATCTTGGTCGATCTAC 58.815 43.478 0.00 0.00 39.79 2.59
811 1082 3.289911 GTCGATCTACTCATGTGCGTAC 58.710 50.000 0.00 0.00 0.00 3.67
827 1098 2.171567 CGTACGTACGTTGGTGATCAG 58.828 52.381 33.95 7.14 44.13 2.90
838 1109 1.065199 TGGTGATCAGCCCATTGACTC 60.065 52.381 21.58 0.00 0.00 3.36
908 1183 7.387122 GCCTAGCTACTGTAGTTTAACAAGTTT 59.613 37.037 15.71 0.00 0.00 2.66
922 1201 4.568152 ACAAGTTTGGAATGTGCTGTAC 57.432 40.909 0.00 0.00 0.00 2.90
931 1210 4.395519 GTGCTGTACACCATGCCA 57.604 55.556 0.00 0.00 44.02 4.92
932 1211 2.872408 GTGCTGTACACCATGCCAT 58.128 52.632 0.00 0.00 44.02 4.40
948 1227 3.041211 TGCCATGAGCTTGACCTACTAT 58.959 45.455 0.00 0.00 44.23 2.12
1029 1345 0.679960 GCCGGGTGCTTATGGTTCTT 60.680 55.000 2.18 0.00 36.87 2.52
1102 1421 3.386078 AGTGGTCTGTGACTATGCCTATG 59.614 47.826 0.00 0.00 32.47 2.23
1103 1422 2.700371 TGGTCTGTGACTATGCCTATGG 59.300 50.000 0.00 0.00 32.47 2.74
1104 1423 2.548920 GGTCTGTGACTATGCCTATGGC 60.549 54.545 1.01 1.01 39.90 4.40
1105 1424 5.070022 GGTCTGTGACTATGCCTATGGCA 62.070 52.174 13.93 13.93 46.82 4.92
1106 1425 6.830179 GGTCTGTGACTATGCCTATGGCAG 62.830 54.167 16.58 6.83 46.38 4.85
1612 1931 4.189188 CGGTGGTACGGGAGCTCG 62.189 72.222 7.83 0.00 0.00 5.03
1682 2001 1.291272 GCGTCGTTTCCCAGGTACT 59.709 57.895 0.00 0.00 43.88 2.73
1683 2002 0.735287 GCGTCGTTTCCCAGGTACTC 60.735 60.000 0.00 0.00 34.60 2.59
1684 2003 0.886563 CGTCGTTTCCCAGGTACTCT 59.113 55.000 0.00 0.00 34.60 3.24
1685 2004 2.086869 CGTCGTTTCCCAGGTACTCTA 58.913 52.381 0.00 0.00 34.60 2.43
1686 2005 2.159462 CGTCGTTTCCCAGGTACTCTAC 60.159 54.545 0.00 0.00 34.60 2.59
1710 2046 1.154197 GTCTACGTGGCCCAAGAAAC 58.846 55.000 2.90 0.00 0.00 2.78
1714 2050 1.971695 CGTGGCCCAAGAAACTCCC 60.972 63.158 0.00 0.00 0.00 4.30
1715 2051 1.152830 GTGGCCCAAGAAACTCCCA 59.847 57.895 0.00 0.00 0.00 4.37
1724 2060 0.919710 AGAAACTCCCATGCCCTACC 59.080 55.000 0.00 0.00 0.00 3.18
1725 2061 0.919710 GAAACTCCCATGCCCTACCT 59.080 55.000 0.00 0.00 0.00 3.08
1727 2063 2.280308 AACTCCCATGCCCTACCTAA 57.720 50.000 0.00 0.00 0.00 2.69
1728 2064 1.807814 ACTCCCATGCCCTACCTAAG 58.192 55.000 0.00 0.00 0.00 2.18
1729 2065 1.009675 ACTCCCATGCCCTACCTAAGT 59.990 52.381 0.00 0.00 0.00 2.24
1731 2067 2.633481 CTCCCATGCCCTACCTAAGTAC 59.367 54.545 0.00 0.00 0.00 2.73
1733 2069 3.046374 CCCATGCCCTACCTAAGTACTT 58.954 50.000 13.68 13.68 0.00 2.24
1734 2070 3.071167 CCCATGCCCTACCTAAGTACTTC 59.929 52.174 12.39 0.00 0.00 3.01
1736 2072 4.409247 CCATGCCCTACCTAAGTACTTCTT 59.591 45.833 12.39 0.00 39.89 2.52
1737 2073 5.453480 CCATGCCCTACCTAAGTACTTCTTC 60.453 48.000 12.39 0.00 37.56 2.87
1738 2074 4.028825 TGCCCTACCTAAGTACTTCTTCC 58.971 47.826 12.39 0.00 37.56 3.46
1739 2075 3.067883 GCCCTACCTAAGTACTTCTTCCG 59.932 52.174 12.39 0.00 37.56 4.30
1740 2076 3.635836 CCCTACCTAAGTACTTCTTCCGG 59.364 52.174 12.39 8.56 37.56 5.14
1742 2078 4.708909 CCTACCTAAGTACTTCTTCCGGTT 59.291 45.833 12.39 1.27 39.30 4.44
1744 2080 4.414677 ACCTAAGTACTTCTTCCGGTTCT 58.585 43.478 12.39 0.00 37.01 3.01
1745 2081 4.837298 ACCTAAGTACTTCTTCCGGTTCTT 59.163 41.667 12.39 0.00 37.01 2.52
1778 4102 9.577110 TTTCAGAAAACATGCAATCTATTCATC 57.423 29.630 0.00 0.00 0.00 2.92
1782 4106 4.478843 ACATGCAATCTATTCATCGCAC 57.521 40.909 0.00 0.00 31.22 5.34
1861 4191 4.314440 AAGCACCGAAGCGAGCCA 62.314 61.111 0.00 0.00 40.15 4.75
2075 4405 0.527565 CCGAGCAAATCCACCAAAGG 59.472 55.000 0.00 0.00 0.00 3.11
2389 4730 1.719378 TCTTGGAGAAGGAGGAGGAGT 59.281 52.381 0.00 0.00 0.00 3.85
2393 4734 3.442076 TGGAGAAGGAGGAGGAGTTTAC 58.558 50.000 0.00 0.00 0.00 2.01
2394 4735 3.077695 TGGAGAAGGAGGAGGAGTTTACT 59.922 47.826 0.00 0.00 0.00 2.24
2395 4736 4.294168 TGGAGAAGGAGGAGGAGTTTACTA 59.706 45.833 0.00 0.00 0.00 1.82
2396 4737 4.646040 GGAGAAGGAGGAGGAGTTTACTAC 59.354 50.000 0.00 0.00 0.00 2.73
2397 4738 4.612401 AGAAGGAGGAGGAGTTTACTACC 58.388 47.826 0.00 0.00 0.00 3.18
2398 4739 4.045590 AGAAGGAGGAGGAGTTTACTACCA 59.954 45.833 0.00 0.00 0.00 3.25
2399 4740 4.415224 AGGAGGAGGAGTTTACTACCAA 57.585 45.455 0.00 0.00 0.00 3.67
2402 4743 3.179685 AGGAGGAGTTTACTACCAACCC 58.820 50.000 0.00 0.00 0.00 4.11
2404 4745 3.328637 GGAGGAGTTTACTACCAACCCAA 59.671 47.826 0.00 0.00 0.00 4.12
2406 4747 5.516062 GGAGGAGTTTACTACCAACCCAATT 60.516 44.000 0.00 0.00 0.00 2.32
2412 4753 3.366052 ACTACCAACCCAATTGCCTAG 57.634 47.619 0.00 0.00 36.93 3.02
2413 4754 2.024414 CTACCAACCCAATTGCCTAGC 58.976 52.381 0.00 0.00 36.93 3.42
2414 4755 0.114168 ACCAACCCAATTGCCTAGCA 59.886 50.000 0.00 0.00 36.93 3.49
2424 4765 1.838112 TTGCCTAGCAATCCCTTGTG 58.162 50.000 0.00 0.00 43.99 3.33
2425 4766 0.680921 TGCCTAGCAATCCCTTGTGC 60.681 55.000 0.00 0.00 41.22 4.57
2426 4767 1.718757 GCCTAGCAATCCCTTGTGCG 61.719 60.000 0.00 0.00 45.62 5.34
2427 4768 0.107703 CCTAGCAATCCCTTGTGCGA 60.108 55.000 0.00 0.00 45.62 5.10
2428 4769 1.475751 CCTAGCAATCCCTTGTGCGAT 60.476 52.381 0.00 0.00 45.62 4.58
2429 4770 2.292267 CTAGCAATCCCTTGTGCGATT 58.708 47.619 0.00 0.00 45.62 3.34
2431 4772 1.895131 AGCAATCCCTTGTGCGATTTT 59.105 42.857 0.00 0.00 45.62 1.82
2432 4773 2.094545 AGCAATCCCTTGTGCGATTTTC 60.095 45.455 0.00 0.00 45.62 2.29
2433 4774 2.094545 GCAATCCCTTGTGCGATTTTCT 60.095 45.455 0.00 0.00 34.69 2.52
2434 4775 3.614870 GCAATCCCTTGTGCGATTTTCTT 60.615 43.478 0.00 0.00 34.69 2.52
2435 4776 4.168760 CAATCCCTTGTGCGATTTTCTTC 58.831 43.478 0.00 0.00 0.00 2.87
2437 4778 1.885887 CCCTTGTGCGATTTTCTTCCA 59.114 47.619 0.00 0.00 0.00 3.53
2438 4779 2.095059 CCCTTGTGCGATTTTCTTCCAG 60.095 50.000 0.00 0.00 0.00 3.86
2439 4780 2.554032 CCTTGTGCGATTTTCTTCCAGT 59.446 45.455 0.00 0.00 0.00 4.00
2440 4781 3.004734 CCTTGTGCGATTTTCTTCCAGTT 59.995 43.478 0.00 0.00 0.00 3.16
2441 4782 3.896648 TGTGCGATTTTCTTCCAGTTC 57.103 42.857 0.00 0.00 0.00 3.01
2448 4789 7.434013 GTGCGATTTTCTTCCAGTTCTTTTTAA 59.566 33.333 0.00 0.00 0.00 1.52
2457 4798 9.295825 TCTTCCAGTTCTTTTTAATCTGCATAA 57.704 29.630 0.00 0.00 0.00 1.90
2562 4903 8.861033 AAAATTGTCGGATTCATTATGACATG 57.139 30.769 0.00 0.00 39.13 3.21
2564 4905 8.675705 AATTGTCGGATTCATTATGACATGTA 57.324 30.769 0.00 0.00 39.13 2.29
2565 4906 7.477144 TTGTCGGATTCATTATGACATGTAC 57.523 36.000 0.00 0.00 39.13 2.90
2566 4907 6.816136 TGTCGGATTCATTATGACATGTACT 58.184 36.000 0.00 0.00 34.85 2.73
2567 4908 7.947282 TGTCGGATTCATTATGACATGTACTA 58.053 34.615 0.00 0.00 34.85 1.82
2652 4993 9.311916 TGGTCAAATTTTGTAAATCTTGACTTG 57.688 29.630 21.96 10.17 38.53 3.16
2659 5000 9.868277 ATTTTGTAAATCTTGACTTGACACAAA 57.132 25.926 0.00 0.00 33.07 2.83
2661 5002 9.515020 TTTGTAAATCTTGACTTGACACAAATC 57.485 29.630 0.00 0.00 30.74 2.17
2683 5034 6.540438 TCTAATAAAATGACACGAGGGAGT 57.460 37.500 0.00 0.00 0.00 3.85
2688 5039 4.715527 AAATGACACGAGGGAGTACTAC 57.284 45.455 0.00 0.00 0.00 2.73
2772 5123 1.444119 GCCCACACGTCTTGAGCAAA 61.444 55.000 0.00 0.00 0.00 3.68
2776 5127 2.805671 CCACACGTCTTGAGCAAATACA 59.194 45.455 0.00 0.00 0.00 2.29
2783 5134 3.076621 TCTTGAGCAAATACACAGCCAG 58.923 45.455 0.00 0.00 0.00 4.85
2831 5394 4.053295 GAGCTGGTACGTTGTACAAAAGA 58.947 43.478 10.51 0.00 0.00 2.52
3134 5700 2.870372 GCAAGGATGACCGTGTGC 59.130 61.111 0.00 0.00 45.10 4.57
3137 5703 3.605749 AAGGATGACCGTGTGCCCG 62.606 63.158 0.00 0.00 41.83 6.13
3226 5792 2.418910 CGCCAGAGTCACGGAGGAT 61.419 63.158 2.88 0.00 0.00 3.24
3283 5849 2.562912 GCCGCACACAAGATGGTG 59.437 61.111 0.00 0.00 44.35 4.17
3320 5886 3.007070 GCGTACGGCTTCACCAACG 62.007 63.158 18.39 0.00 45.68 4.10
3392 5959 2.738139 CGTCTGGCGCATGTGTCA 60.738 61.111 13.78 13.78 0.00 3.58
3824 6391 3.006537 CGACAAGTTCCTGGAGGTAAAGA 59.993 47.826 0.00 0.00 36.34 2.52
3836 6403 1.471684 AGGTAAAGAGCAGGTACGACG 59.528 52.381 0.00 0.00 0.00 5.12
3880 6447 0.898789 GGAGTGACCAGGTTCTCGGA 60.899 60.000 15.26 0.00 38.79 4.55
3919 6486 3.479269 GTCGAGAAGGGTTGCGCG 61.479 66.667 0.00 0.00 0.00 6.86
4121 6695 2.154854 GCTTTTGCTTTTCAGGTCCC 57.845 50.000 0.00 0.00 43.35 4.46
4131 6705 0.692756 TTCAGGTCCCTGTGGTGACA 60.693 55.000 12.88 0.00 43.96 3.58
4165 6739 6.183360 TGTGTCCTATGCAATGTTGTTTCTTT 60.183 34.615 0.00 0.00 0.00 2.52
4167 6741 7.326063 GTGTCCTATGCAATGTTGTTTCTTTAC 59.674 37.037 0.00 0.00 0.00 2.01
4168 6742 7.230510 TGTCCTATGCAATGTTGTTTCTTTACT 59.769 33.333 0.00 0.00 0.00 2.24
4173 6747 6.728200 TGCAATGTTGTTTCTTTACTGAGAG 58.272 36.000 0.00 0.00 0.00 3.20
4174 6748 6.542005 TGCAATGTTGTTTCTTTACTGAGAGA 59.458 34.615 0.00 0.00 0.00 3.10
4175 6749 6.853362 GCAATGTTGTTTCTTTACTGAGAGAC 59.147 38.462 0.00 0.00 32.88 3.36
4208 6794 9.679661 AATGTTTTTCCTTCTGGTTTATGTTTT 57.320 25.926 0.00 0.00 34.23 2.43
4231 6817 4.756502 ACTCTACGGGTTTGCTAATTCTC 58.243 43.478 0.00 0.00 0.00 2.87
4237 6823 4.636206 ACGGGTTTGCTAATTCTCATTCTC 59.364 41.667 0.00 0.00 0.00 2.87
4263 6849 8.177663 CGTCTGCATGAGAATTAACAAAGTTAT 58.822 33.333 0.00 0.00 30.26 1.89
4293 6879 6.233434 ACTTCTGCATGAGTTGATTAGTGAA 58.767 36.000 0.00 0.00 0.00 3.18
4295 6881 7.229306 ACTTCTGCATGAGTTGATTAGTGAAAA 59.771 33.333 0.00 0.00 0.00 2.29
4338 6926 1.207593 GTGCATGTGAGTCCAACGC 59.792 57.895 0.00 0.00 0.00 4.84
4349 6937 3.003897 TGAGTCCAACGCAAATGGTTAAC 59.996 43.478 0.00 0.00 39.09 2.01
4350 6938 2.295070 AGTCCAACGCAAATGGTTAACC 59.705 45.455 18.27 18.27 39.09 2.85
4415 7003 3.536570 TCATCGTTTCAACAACCTCACA 58.463 40.909 0.00 0.00 0.00 3.58
4445 7033 5.217978 TCTTGATTTGGAGCAGCAAATTT 57.782 34.783 0.00 0.00 31.91 1.82
4474 7062 7.118723 TCAATGGAAACTTAGAGCATGGTTAT 58.881 34.615 0.00 0.00 0.00 1.89
4479 7067 8.421784 TGGAAACTTAGAGCATGGTTATAGTAG 58.578 37.037 0.00 0.00 0.00 2.57
4483 7071 8.770010 ACTTAGAGCATGGTTATAGTAGAGTT 57.230 34.615 0.00 0.00 0.00 3.01
4499 7087 6.793349 AGTAGAGTTAGTTGTTGGCTATACG 58.207 40.000 0.00 0.00 31.55 3.06
4506 7094 3.058501 AGTTGTTGGCTATACGTTGTTGC 60.059 43.478 0.00 0.00 0.00 4.17
4572 7164 2.481441 TGGCCCACTTCATACTCTCAT 58.519 47.619 0.00 0.00 0.00 2.90
4598 7190 4.697352 AGTTTCAAGGAGCACATGATACAC 59.303 41.667 0.00 0.00 30.50 2.90
4601 7193 3.118629 TCAAGGAGCACATGATACACCTC 60.119 47.826 0.00 0.00 0.00 3.85
4603 7195 1.212616 GAGCACATGATACACCTCGC 58.787 55.000 0.00 0.00 0.00 5.03
4620 7212 3.309388 CTCGCTATTCATCTACAACCCG 58.691 50.000 0.00 0.00 0.00 5.28
4621 7213 2.691526 TCGCTATTCATCTACAACCCGT 59.308 45.455 0.00 0.00 0.00 5.28
4639 7231 4.403113 ACCCGTTTATCTTCTCTCTCCTTC 59.597 45.833 0.00 0.00 0.00 3.46
4647 7239 1.840737 TCTCTCTCCTTCAACTCGGG 58.159 55.000 0.00 0.00 0.00 5.14
4652 7244 3.006967 TCTCTCCTTCAACTCGGGAAAAG 59.993 47.826 0.00 0.00 0.00 2.27
4660 7252 8.711170 TCCTTCAACTCGGGAAAAGTATATTAT 58.289 33.333 0.00 0.00 0.00 1.28
4695 7287 3.941483 AGTCCGCTTCAATCACCTTATTG 59.059 43.478 0.00 0.00 38.05 1.90
4698 7290 4.873827 TCCGCTTCAATCACCTTATTGTAC 59.126 41.667 0.00 0.00 37.94 2.90
4700 7292 5.354234 CCGCTTCAATCACCTTATTGTACTT 59.646 40.000 0.00 0.00 37.94 2.24
4706 7298 7.168219 TCAATCACCTTATTGTACTTGCTCTT 58.832 34.615 0.00 0.00 37.94 2.85
4723 7315 4.010349 GCTCTTGGCAAGTTACATAACCT 58.990 43.478 25.39 0.00 41.35 3.50
4724 7316 5.183228 GCTCTTGGCAAGTTACATAACCTA 58.817 41.667 25.39 2.13 41.35 3.08
4732 7325 5.465390 GCAAGTTACATAACCTATCGCATCA 59.535 40.000 0.00 0.00 36.88 3.07
4743 7336 4.578928 ACCTATCGCATCAATAAACCAACC 59.421 41.667 0.00 0.00 0.00 3.77
4746 7339 1.202245 CGCATCAATAAACCAACCGGG 60.202 52.381 6.32 0.00 44.81 5.73
4796 7389 4.895224 TCGAATTCGATGCAGTAGTACT 57.105 40.909 25.96 0.00 44.22 2.73
4797 7390 4.845387 TCGAATTCGATGCAGTAGTACTC 58.155 43.478 25.96 0.00 44.22 2.59
4798 7391 3.975670 CGAATTCGATGCAGTAGTACTCC 59.024 47.826 23.29 0.00 43.02 3.85
4799 7392 4.299978 GAATTCGATGCAGTAGTACTCCC 58.700 47.826 0.00 0.00 0.00 4.30
4801 7394 2.573369 TCGATGCAGTAGTACTCCCTC 58.427 52.381 0.00 0.00 0.00 4.30
4802 7395 1.609555 CGATGCAGTAGTACTCCCTCC 59.390 57.143 0.00 0.00 0.00 4.30
4803 7396 1.609555 GATGCAGTAGTACTCCCTCCG 59.390 57.143 0.00 0.00 0.00 4.63
4804 7397 1.035932 TGCAGTAGTACTCCCTCCGC 61.036 60.000 0.00 0.40 0.00 5.54
4805 7398 0.752376 GCAGTAGTACTCCCTCCGCT 60.752 60.000 0.00 0.00 0.00 5.52
4806 7399 1.310904 CAGTAGTACTCCCTCCGCTC 58.689 60.000 0.00 0.00 0.00 5.03
4807 7400 0.183252 AGTAGTACTCCCTCCGCTCC 59.817 60.000 0.00 0.00 0.00 4.70
4808 7401 0.106819 GTAGTACTCCCTCCGCTCCA 60.107 60.000 0.00 0.00 0.00 3.86
4809 7402 0.627451 TAGTACTCCCTCCGCTCCAA 59.373 55.000 0.00 0.00 0.00 3.53
4810 7403 0.252103 AGTACTCCCTCCGCTCCAAA 60.252 55.000 0.00 0.00 0.00 3.28
4811 7404 0.611714 GTACTCCCTCCGCTCCAAAA 59.388 55.000 0.00 0.00 0.00 2.44
4812 7405 1.209747 GTACTCCCTCCGCTCCAAAAT 59.790 52.381 0.00 0.00 0.00 1.82
4813 7406 1.580059 ACTCCCTCCGCTCCAAAATA 58.420 50.000 0.00 0.00 0.00 1.40
4814 7407 1.209747 ACTCCCTCCGCTCCAAAATAC 59.790 52.381 0.00 0.00 0.00 1.89
4815 7408 1.209504 CTCCCTCCGCTCCAAAATACA 59.790 52.381 0.00 0.00 0.00 2.29
4818 8375 2.823154 CCCTCCGCTCCAAAATACAAAA 59.177 45.455 0.00 0.00 0.00 2.44
4820 8377 4.081697 CCCTCCGCTCCAAAATACAAAAAT 60.082 41.667 0.00 0.00 0.00 1.82
4825 8382 9.450807 CTCCGCTCCAAAATACAAAAATAATAG 57.549 33.333 0.00 0.00 0.00 1.73
4921 8478 5.702065 TTATGTGGGTGAAGGTTAGCATA 57.298 39.130 0.00 0.00 0.00 3.14
4925 8482 3.055385 GTGGGTGAAGGTTAGCATACTGA 60.055 47.826 0.00 0.00 0.00 3.41
4935 8492 8.644374 AAGGTTAGCATACTGAACCATAAAAA 57.356 30.769 5.86 0.00 44.29 1.94
4936 8493 8.281212 AGGTTAGCATACTGAACCATAAAAAG 57.719 34.615 5.86 0.00 44.29 2.27
4938 8495 8.520351 GGTTAGCATACTGAACCATAAAAAGTT 58.480 33.333 0.00 0.00 41.93 2.66
4939 8496 9.908152 GTTAGCATACTGAACCATAAAAAGTTT 57.092 29.630 0.00 0.00 0.00 2.66
4967 8524 9.623000 AAAGAACTTACCAAACAGTATTGTACT 57.377 29.630 0.00 0.00 40.28 2.73
4968 8525 8.828688 AGAACTTACCAAACAGTATTGTACTC 57.171 34.615 0.00 0.00 36.76 2.59
4969 8526 7.876582 AGAACTTACCAAACAGTATTGTACTCC 59.123 37.037 0.00 0.00 36.76 3.85
4970 8527 6.470278 ACTTACCAAACAGTATTGTACTCCC 58.530 40.000 0.00 0.00 36.76 4.30
4971 8528 6.271624 ACTTACCAAACAGTATTGTACTCCCT 59.728 38.462 0.00 0.00 36.76 4.20
4972 8529 5.161943 ACCAAACAGTATTGTACTCCCTC 57.838 43.478 0.00 0.00 36.76 4.30
4973 8530 4.844655 ACCAAACAGTATTGTACTCCCTCT 59.155 41.667 0.00 0.00 36.76 3.69
4974 8531 5.046520 ACCAAACAGTATTGTACTCCCTCTC 60.047 44.000 0.00 0.00 36.76 3.20
4975 8532 5.187967 CCAAACAGTATTGTACTCCCTCTCT 59.812 44.000 0.00 0.00 36.76 3.10
4976 8533 6.380274 CCAAACAGTATTGTACTCCCTCTCTA 59.620 42.308 0.00 0.00 36.76 2.43
4977 8534 7.259161 CAAACAGTATTGTACTCCCTCTCTAC 58.741 42.308 0.00 0.00 36.76 2.59
4978 8535 5.447757 ACAGTATTGTACTCCCTCTCTACC 58.552 45.833 0.00 0.00 36.76 3.18
4979 8536 4.515944 CAGTATTGTACTCCCTCTCTACCG 59.484 50.000 0.00 0.00 36.76 4.02
4980 8537 3.666345 ATTGTACTCCCTCTCTACCGT 57.334 47.619 0.00 0.00 0.00 4.83
4981 8538 3.446442 TTGTACTCCCTCTCTACCGTT 57.554 47.619 0.00 0.00 0.00 4.44
4982 8539 2.996631 TGTACTCCCTCTCTACCGTTC 58.003 52.381 0.00 0.00 0.00 3.95
4983 8540 2.306805 TGTACTCCCTCTCTACCGTTCA 59.693 50.000 0.00 0.00 0.00 3.18
4984 8541 2.131776 ACTCCCTCTCTACCGTTCAG 57.868 55.000 0.00 0.00 0.00 3.02
4985 8542 0.741915 CTCCCTCTCTACCGTTCAGC 59.258 60.000 0.00 0.00 0.00 4.26
4986 8543 0.331954 TCCCTCTCTACCGTTCAGCT 59.668 55.000 0.00 0.00 0.00 4.24
4987 8544 1.562942 TCCCTCTCTACCGTTCAGCTA 59.437 52.381 0.00 0.00 0.00 3.32
4988 8545 1.677052 CCCTCTCTACCGTTCAGCTAC 59.323 57.143 0.00 0.00 0.00 3.58
4989 8546 2.645802 CCTCTCTACCGTTCAGCTACT 58.354 52.381 0.00 0.00 0.00 2.57
4990 8547 2.614983 CCTCTCTACCGTTCAGCTACTC 59.385 54.545 0.00 0.00 0.00 2.59
4991 8548 2.614983 CTCTCTACCGTTCAGCTACTCC 59.385 54.545 0.00 0.00 0.00 3.85
4992 8549 2.026542 TCTCTACCGTTCAGCTACTCCA 60.027 50.000 0.00 0.00 0.00 3.86
4993 8550 2.753452 CTCTACCGTTCAGCTACTCCAA 59.247 50.000 0.00 0.00 0.00 3.53
4994 8551 2.490903 TCTACCGTTCAGCTACTCCAAC 59.509 50.000 0.00 0.00 0.00 3.77
4995 8552 1.045407 ACCGTTCAGCTACTCCAACA 58.955 50.000 0.00 0.00 0.00 3.33
4996 8553 1.414919 ACCGTTCAGCTACTCCAACAA 59.585 47.619 0.00 0.00 0.00 2.83
4997 8554 1.798813 CCGTTCAGCTACTCCAACAAC 59.201 52.381 0.00 0.00 0.00 3.32
4998 8555 2.479837 CGTTCAGCTACTCCAACAACA 58.520 47.619 0.00 0.00 0.00 3.33
4999 8556 2.221055 CGTTCAGCTACTCCAACAACAC 59.779 50.000 0.00 0.00 0.00 3.32
5000 8557 3.202906 GTTCAGCTACTCCAACAACACA 58.797 45.455 0.00 0.00 0.00 3.72
5001 8558 3.769739 TCAGCTACTCCAACAACACAT 57.230 42.857 0.00 0.00 0.00 3.21
5002 8559 4.882842 TCAGCTACTCCAACAACACATA 57.117 40.909 0.00 0.00 0.00 2.29
5003 8560 5.420725 TCAGCTACTCCAACAACACATAT 57.579 39.130 0.00 0.00 0.00 1.78
5004 8561 5.804639 TCAGCTACTCCAACAACACATATT 58.195 37.500 0.00 0.00 0.00 1.28
5005 8562 6.237901 TCAGCTACTCCAACAACACATATTT 58.762 36.000 0.00 0.00 0.00 1.40
5006 8563 6.371548 TCAGCTACTCCAACAACACATATTTC 59.628 38.462 0.00 0.00 0.00 2.17
5007 8564 5.351465 AGCTACTCCAACAACACATATTTCG 59.649 40.000 0.00 0.00 0.00 3.46
5008 8565 5.447279 GCTACTCCAACAACACATATTTCGG 60.447 44.000 0.00 0.00 0.00 4.30
5009 8566 4.394729 ACTCCAACAACACATATTTCGGT 58.605 39.130 0.00 0.00 0.00 4.69
5010 8567 5.553123 ACTCCAACAACACATATTTCGGTA 58.447 37.500 0.00 0.00 0.00 4.02
5011 8568 5.410439 ACTCCAACAACACATATTTCGGTAC 59.590 40.000 0.00 0.00 0.00 3.34
5012 8569 5.306394 TCCAACAACACATATTTCGGTACA 58.694 37.500 0.00 0.00 0.00 2.90
5013 8570 5.410132 TCCAACAACACATATTTCGGTACAG 59.590 40.000 0.00 0.00 0.00 2.74
5014 8571 5.410132 CCAACAACACATATTTCGGTACAGA 59.590 40.000 0.00 0.00 0.00 3.41
5015 8572 6.402118 CCAACAACACATATTTCGGTACAGAG 60.402 42.308 0.00 0.00 0.00 3.35
5016 8573 5.175859 ACAACACATATTTCGGTACAGAGG 58.824 41.667 0.00 0.00 0.00 3.69
5017 8574 4.402056 ACACATATTTCGGTACAGAGGG 57.598 45.455 0.00 0.00 0.00 4.30
5018 8575 4.028131 ACACATATTTCGGTACAGAGGGA 58.972 43.478 0.00 0.00 0.00 4.20
5019 8576 4.099573 ACACATATTTCGGTACAGAGGGAG 59.900 45.833 0.00 0.00 0.00 4.30
5020 8577 4.099573 CACATATTTCGGTACAGAGGGAGT 59.900 45.833 0.00 0.00 0.00 3.85
5021 8578 5.301045 CACATATTTCGGTACAGAGGGAGTA 59.699 44.000 0.00 0.00 0.00 2.59
5022 8579 6.015350 CACATATTTCGGTACAGAGGGAGTAT 60.015 42.308 0.00 0.00 0.00 2.12
5023 8580 7.176165 CACATATTTCGGTACAGAGGGAGTATA 59.824 40.741 0.00 0.00 0.00 1.47
5024 8581 7.727186 ACATATTTCGGTACAGAGGGAGTATAA 59.273 37.037 0.00 0.00 0.00 0.98
5025 8582 8.582437 CATATTTCGGTACAGAGGGAGTATAAA 58.418 37.037 0.00 0.00 0.00 1.40
5026 8583 6.855763 TTTCGGTACAGAGGGAGTATAAAA 57.144 37.500 0.00 0.00 0.00 1.52
5027 8584 6.855763 TTCGGTACAGAGGGAGTATAAAAA 57.144 37.500 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 7.504924 TCACATTCAACTACCTTTTGTTAGG 57.495 36.000 0.00 0.00 41.31 2.69
26 27 7.012894 TCGATTCACATTCAACTACCTTTTGTT 59.987 33.333 0.00 0.00 0.00 2.83
32 33 4.929808 GTGTCGATTCACATTCAACTACCT 59.070 41.667 1.54 0.00 38.12 3.08
33 34 4.929808 AGTGTCGATTCACATTCAACTACC 59.070 41.667 8.66 0.00 40.37 3.18
64 65 1.953559 TGCATCTTACTTGGGCGATC 58.046 50.000 0.00 0.00 0.00 3.69
66 67 1.209261 TCATGCATCTTACTTGGGCGA 59.791 47.619 0.00 0.00 0.00 5.54
68 69 2.648059 ACTCATGCATCTTACTTGGGC 58.352 47.619 0.00 0.00 0.00 5.36
82 83 6.173339 ACTCATAGGTGGTTAACAACTCATG 58.827 40.000 12.85 14.59 46.59 3.07
83 84 6.374417 ACTCATAGGTGGTTAACAACTCAT 57.626 37.500 12.85 4.01 46.59 2.90
85 86 6.147328 GTCAACTCATAGGTGGTTAACAACTC 59.853 42.308 12.85 3.62 46.59 3.01
87 88 5.995897 AGTCAACTCATAGGTGGTTAACAAC 59.004 40.000 8.10 6.22 32.64 3.32
89 90 5.818678 AGTCAACTCATAGGTGGTTAACA 57.181 39.130 8.10 0.00 32.64 2.41
90 91 5.106673 GCAAGTCAACTCATAGGTGGTTAAC 60.107 44.000 0.00 0.00 32.64 2.01
171 351 3.181475 CGGATATTGCGATGGCCTATAGT 60.181 47.826 3.32 0.00 38.85 2.12
172 352 3.181475 ACGGATATTGCGATGGCCTATAG 60.181 47.826 3.32 0.00 38.85 1.31
173 353 2.764010 ACGGATATTGCGATGGCCTATA 59.236 45.455 3.32 0.00 38.85 1.31
229 409 9.121517 CATTTATTAATTCTCCGCTTGCTTATG 57.878 33.333 0.00 0.00 0.00 1.90
260 440 5.632244 TCGCGAGTATAATAATAGTGGCA 57.368 39.130 3.71 0.00 40.74 4.92
267 447 6.304922 CGTAGCACTTTCGCGAGTATAATAAT 59.695 38.462 9.59 0.00 36.85 1.28
281 461 1.852895 CATCGCCTACGTAGCACTTTC 59.147 52.381 17.41 0.96 41.18 2.62
282 462 1.470979 CCATCGCCTACGTAGCACTTT 60.471 52.381 17.41 0.00 41.18 2.66
283 463 0.102481 CCATCGCCTACGTAGCACTT 59.898 55.000 17.41 0.00 41.18 3.16
284 464 0.750546 TCCATCGCCTACGTAGCACT 60.751 55.000 17.41 0.00 41.18 4.40
286 466 0.313987 CATCCATCGCCTACGTAGCA 59.686 55.000 17.41 3.41 41.18 3.49
290 470 1.336887 GCATACATCCATCGCCTACGT 60.337 52.381 0.00 0.00 41.18 3.57
291 471 1.336795 TGCATACATCCATCGCCTACG 60.337 52.381 0.00 0.00 42.01 3.51
292 472 2.069273 GTGCATACATCCATCGCCTAC 58.931 52.381 0.00 0.00 0.00 3.18
293 473 1.336795 CGTGCATACATCCATCGCCTA 60.337 52.381 0.00 0.00 0.00 3.93
294 474 0.601046 CGTGCATACATCCATCGCCT 60.601 55.000 0.00 0.00 0.00 5.52
295 475 0.599991 TCGTGCATACATCCATCGCC 60.600 55.000 0.00 0.00 0.00 5.54
296 476 0.508641 GTCGTGCATACATCCATCGC 59.491 55.000 0.00 0.00 0.00 4.58
297 477 2.054363 GAGTCGTGCATACATCCATCG 58.946 52.381 0.00 0.00 0.00 3.84
298 478 3.055591 CAGAGTCGTGCATACATCCATC 58.944 50.000 0.00 0.00 0.00 3.51
299 479 2.224137 CCAGAGTCGTGCATACATCCAT 60.224 50.000 0.00 0.00 0.00 3.41
300 480 1.136891 CCAGAGTCGTGCATACATCCA 59.863 52.381 0.00 0.00 0.00 3.41
301 481 1.539065 CCCAGAGTCGTGCATACATCC 60.539 57.143 0.00 0.00 0.00 3.51
302 482 1.409064 TCCCAGAGTCGTGCATACATC 59.591 52.381 0.00 0.00 0.00 3.06
303 483 1.410517 CTCCCAGAGTCGTGCATACAT 59.589 52.381 0.00 0.00 0.00 2.29
304 484 0.817654 CTCCCAGAGTCGTGCATACA 59.182 55.000 0.00 0.00 0.00 2.29
305 485 0.103208 CCTCCCAGAGTCGTGCATAC 59.897 60.000 0.00 0.00 0.00 2.39
306 486 0.033503 TCCTCCCAGAGTCGTGCATA 60.034 55.000 0.00 0.00 0.00 3.14
307 487 0.689080 ATCCTCCCAGAGTCGTGCAT 60.689 55.000 0.00 0.00 0.00 3.96
308 488 1.305297 ATCCTCCCAGAGTCGTGCA 60.305 57.895 0.00 0.00 0.00 4.57
309 489 1.142748 CATCCTCCCAGAGTCGTGC 59.857 63.158 0.00 0.00 0.00 5.34
310 490 1.680522 CCCATCCTCCCAGAGTCGTG 61.681 65.000 0.00 0.00 0.00 4.35
311 491 1.381872 CCCATCCTCCCAGAGTCGT 60.382 63.158 0.00 0.00 0.00 4.34
312 492 2.801631 GCCCATCCTCCCAGAGTCG 61.802 68.421 0.00 0.00 0.00 4.18
313 493 1.690633 TGCCCATCCTCCCAGAGTC 60.691 63.158 0.00 0.00 0.00 3.36
314 494 1.692042 CTGCCCATCCTCCCAGAGT 60.692 63.158 0.00 0.00 0.00 3.24
315 495 1.692042 ACTGCCCATCCTCCCAGAG 60.692 63.158 0.00 0.00 0.00 3.35
316 496 1.690633 GACTGCCCATCCTCCCAGA 60.691 63.158 0.00 0.00 0.00 3.86
317 497 2.750657 GGACTGCCCATCCTCCCAG 61.751 68.421 0.00 0.00 33.03 4.45
318 498 2.692368 GGACTGCCCATCCTCCCA 60.692 66.667 0.00 0.00 33.03 4.37
319 499 2.692368 TGGACTGCCCATCCTCCC 60.692 66.667 0.30 0.00 40.82 4.30
320 500 2.914289 CTGGACTGCCCATCCTCC 59.086 66.667 0.00 0.00 45.57 4.30
321 501 2.191641 GCTGGACTGCCCATCCTC 59.808 66.667 0.00 0.00 45.57 3.71
322 502 3.415087 GGCTGGACTGCCCATCCT 61.415 66.667 8.85 0.00 45.63 3.24
330 510 1.226686 GCATATCAGCGGCTGGACTG 61.227 60.000 28.18 21.52 35.15 3.51
331 511 1.070445 GCATATCAGCGGCTGGACT 59.930 57.895 28.18 16.05 31.51 3.85
332 512 3.647824 GCATATCAGCGGCTGGAC 58.352 61.111 28.18 10.79 31.51 4.02
340 520 2.376808 ACTATCCAGCGCATATCAGC 57.623 50.000 11.47 0.00 0.00 4.26
341 521 3.801050 GCATACTATCCAGCGCATATCAG 59.199 47.826 11.47 3.23 0.00 2.90
342 522 3.195396 TGCATACTATCCAGCGCATATCA 59.805 43.478 11.47 0.00 0.00 2.15
343 523 3.785486 TGCATACTATCCAGCGCATATC 58.215 45.455 11.47 0.00 0.00 1.63
344 524 3.893326 TGCATACTATCCAGCGCATAT 57.107 42.857 11.47 1.79 0.00 1.78
345 525 3.195396 TCATGCATACTATCCAGCGCATA 59.805 43.478 11.47 0.00 35.09 3.14
346 526 2.027837 TCATGCATACTATCCAGCGCAT 60.028 45.455 11.47 0.00 36.45 4.73
347 527 1.344114 TCATGCATACTATCCAGCGCA 59.656 47.619 11.47 0.00 31.62 6.09
348 528 2.084610 TCATGCATACTATCCAGCGC 57.915 50.000 0.00 0.00 0.00 5.92
349 529 2.409715 CGTTCATGCATACTATCCAGCG 59.590 50.000 0.00 0.00 0.00 5.18
350 530 2.738846 CCGTTCATGCATACTATCCAGC 59.261 50.000 0.00 0.00 0.00 4.85
351 531 2.738846 GCCGTTCATGCATACTATCCAG 59.261 50.000 0.00 0.00 0.00 3.86
352 532 2.368548 AGCCGTTCATGCATACTATCCA 59.631 45.455 0.00 0.00 0.00 3.41
353 533 3.045601 AGCCGTTCATGCATACTATCC 57.954 47.619 0.00 0.00 0.00 2.59
354 534 4.058124 TCAAGCCGTTCATGCATACTATC 58.942 43.478 0.00 0.00 0.00 2.08
355 535 4.071961 TCAAGCCGTTCATGCATACTAT 57.928 40.909 0.00 0.00 0.00 2.12
356 536 3.535280 TCAAGCCGTTCATGCATACTA 57.465 42.857 0.00 0.00 0.00 1.82
357 537 2.401583 TCAAGCCGTTCATGCATACT 57.598 45.000 0.00 0.00 0.00 2.12
358 538 4.214119 ACATATCAAGCCGTTCATGCATAC 59.786 41.667 0.00 0.00 0.00 2.39
359 539 4.213906 CACATATCAAGCCGTTCATGCATA 59.786 41.667 0.00 0.00 0.00 3.14
360 540 3.004002 CACATATCAAGCCGTTCATGCAT 59.996 43.478 0.00 0.00 0.00 3.96
361 541 2.355444 CACATATCAAGCCGTTCATGCA 59.645 45.455 0.00 0.00 0.00 3.96
362 542 2.855953 GCACATATCAAGCCGTTCATGC 60.856 50.000 0.00 0.00 0.00 4.06
363 543 2.615447 AGCACATATCAAGCCGTTCATG 59.385 45.455 0.00 0.00 0.00 3.07
364 544 2.615447 CAGCACATATCAAGCCGTTCAT 59.385 45.455 0.00 0.00 0.00 2.57
365 545 2.009051 CAGCACATATCAAGCCGTTCA 58.991 47.619 0.00 0.00 0.00 3.18
366 546 2.009774 ACAGCACATATCAAGCCGTTC 58.990 47.619 0.00 0.00 0.00 3.95
367 547 2.009774 GACAGCACATATCAAGCCGTT 58.990 47.619 0.00 0.00 0.00 4.44
368 548 1.656652 GACAGCACATATCAAGCCGT 58.343 50.000 0.00 0.00 0.00 5.68
369 549 0.578683 CGACAGCACATATCAAGCCG 59.421 55.000 0.00 0.00 0.00 5.52
370 550 1.328680 CACGACAGCACATATCAAGCC 59.671 52.381 0.00 0.00 0.00 4.35
371 551 1.267732 GCACGACAGCACATATCAAGC 60.268 52.381 0.00 0.00 0.00 4.01
372 552 2.001872 TGCACGACAGCACATATCAAG 58.998 47.619 0.00 0.00 40.11 3.02
373 553 2.091852 TGCACGACAGCACATATCAA 57.908 45.000 0.00 0.00 40.11 2.57
374 554 3.830679 TGCACGACAGCACATATCA 57.169 47.368 0.00 0.00 40.11 2.15
381 561 2.237066 CGACTTGTGCACGACAGCA 61.237 57.895 13.13 0.00 43.35 4.41
382 562 2.147204 GACGACTTGTGCACGACAGC 62.147 60.000 13.13 0.00 35.44 4.40
383 563 1.548973 GGACGACTTGTGCACGACAG 61.549 60.000 13.13 10.48 39.04 3.51
384 564 1.590525 GGACGACTTGTGCACGACA 60.591 57.895 13.13 0.00 39.04 4.35
385 565 1.590525 TGGACGACTTGTGCACGAC 60.591 57.895 13.13 0.00 44.74 4.34
386 566 2.809010 TGGACGACTTGTGCACGA 59.191 55.556 13.13 9.87 44.74 4.35
406 586 1.200474 CTGCTATACACACGACGCCG 61.200 60.000 0.00 0.00 42.50 6.46
407 587 1.480219 GCTGCTATACACACGACGCC 61.480 60.000 0.00 0.00 0.00 5.68
408 588 0.525668 AGCTGCTATACACACGACGC 60.526 55.000 0.00 0.00 0.00 5.19
409 589 1.583856 CAAGCTGCTATACACACGACG 59.416 52.381 0.90 0.00 0.00 5.12
410 590 1.324736 GCAAGCTGCTATACACACGAC 59.675 52.381 0.90 0.00 40.96 4.34
411 591 1.640428 GCAAGCTGCTATACACACGA 58.360 50.000 0.90 0.00 40.96 4.35
422 602 1.504359 TGAATGCAAAAGCAAGCTGC 58.496 45.000 0.00 0.00 45.46 5.25
423 603 4.539509 TTTTGAATGCAAAAGCAAGCTG 57.460 36.364 7.56 0.00 46.09 4.24
509 689 8.172352 AGTGTAAAATATGCCCGCATTAATTA 57.828 30.769 7.61 2.71 37.82 1.40
510 690 7.014230 AGAGTGTAAAATATGCCCGCATTAATT 59.986 33.333 7.61 0.00 37.82 1.40
511 691 6.490040 AGAGTGTAAAATATGCCCGCATTAAT 59.510 34.615 7.61 0.00 37.82 1.40
512 692 5.825679 AGAGTGTAAAATATGCCCGCATTAA 59.174 36.000 7.61 0.00 37.82 1.40
520 700 3.954258 AGGCCAAGAGTGTAAAATATGCC 59.046 43.478 5.01 0.00 35.42 4.40
523 703 9.255029 ACATTTTAGGCCAAGAGTGTAAAATAT 57.745 29.630 5.01 0.00 33.56 1.28
573 753 2.872858 GCGCCATACTTTCCTTTAGAGG 59.127 50.000 0.00 0.00 45.02 3.69
581 761 2.822255 TGCCGCGCCATACTTTCC 60.822 61.111 0.00 0.00 0.00 3.13
605 785 8.934825 CCAACAACATCTTTCAAAGAAAAAGAA 58.065 29.630 3.35 0.00 43.76 2.52
606 786 7.548780 CCCAACAACATCTTTCAAAGAAAAAGA 59.451 33.333 3.35 1.22 44.43 2.52
607 787 7.677041 GCCCAACAACATCTTTCAAAGAAAAAG 60.677 37.037 3.35 0.00 41.63 2.27
613 793 3.070015 AGGCCCAACAACATCTTTCAAAG 59.930 43.478 0.00 0.00 0.00 2.77
625 805 2.000825 TAGCACACCAGGCCCAACAA 62.001 55.000 0.00 0.00 0.00 2.83
645 825 6.215477 ACAAGTCGCATGTTATCAATATCG 57.785 37.500 0.00 0.00 0.00 2.92
646 826 9.533983 CATTACAAGTCGCATGTTATCAATATC 57.466 33.333 0.00 0.00 32.27 1.63
647 827 9.056005 ACATTACAAGTCGCATGTTATCAATAT 57.944 29.630 0.00 0.00 32.27 1.28
648 828 8.334632 CACATTACAAGTCGCATGTTATCAATA 58.665 33.333 0.00 0.00 32.27 1.90
649 829 7.188834 CACATTACAAGTCGCATGTTATCAAT 58.811 34.615 0.00 0.00 32.27 2.57
650 830 6.403092 CCACATTACAAGTCGCATGTTATCAA 60.403 38.462 0.00 0.00 32.27 2.57
651 831 5.064579 CCACATTACAAGTCGCATGTTATCA 59.935 40.000 0.00 0.00 32.27 2.15
652 832 5.501715 CCACATTACAAGTCGCATGTTATC 58.498 41.667 0.00 0.00 32.27 1.75
695 940 6.540438 TGATATGAGATGAGCTATGCATCA 57.460 37.500 0.19 0.00 43.50 3.07
717 984 3.602265 CGCGTAGATGTTGTGTGCATATG 60.602 47.826 0.00 0.00 0.00 1.78
718 985 2.539688 CGCGTAGATGTTGTGTGCATAT 59.460 45.455 0.00 0.00 0.00 1.78
719 986 1.923864 CGCGTAGATGTTGTGTGCATA 59.076 47.619 0.00 0.00 0.00 3.14
720 987 0.721154 CGCGTAGATGTTGTGTGCAT 59.279 50.000 0.00 0.00 0.00 3.96
721 988 0.598942 ACGCGTAGATGTTGTGTGCA 60.599 50.000 11.67 0.00 0.00 4.57
733 1000 2.471607 CTTGCACTGCACGCGTAG 59.528 61.111 13.44 9.93 38.71 3.51
752 1019 2.046604 GGGTACGTGGGTGCTTCC 60.047 66.667 0.00 0.00 0.00 3.46
760 1027 1.201647 CTGTCTACAGTGGGTACGTGG 59.798 57.143 0.00 0.00 39.09 4.94
765 1036 3.838317 AGATTTGCTGTCTACAGTGGGTA 59.162 43.478 11.54 0.00 45.45 3.69
811 1082 1.082117 GGGCTGATCACCAACGTACG 61.082 60.000 15.01 15.01 0.00 3.67
819 1090 1.211457 AGAGTCAATGGGCTGATCACC 59.789 52.381 0.00 0.00 0.00 4.02
827 1098 0.391130 TACGTGCAGAGTCAATGGGC 60.391 55.000 0.00 0.00 0.00 5.36
838 1109 0.033504 AACACCACCTCTACGTGCAG 59.966 55.000 0.00 0.00 32.10 4.41
864 1135 1.209275 GCATGTTCTCGATCGTCCCG 61.209 60.000 15.94 2.76 0.00 5.14
866 1137 0.103208 AGGCATGTTCTCGATCGTCC 59.897 55.000 15.94 2.29 0.00 4.79
922 1201 0.454600 GTCAAGCTCATGGCATGGTG 59.545 55.000 26.15 19.38 44.79 4.17
948 1227 6.940298 GCCCTTGCAACCACTAATAATATAGA 59.060 38.462 0.00 0.00 37.47 1.98
962 1275 1.098129 GCTAGCTAGCCCTTGCAACC 61.098 60.000 31.67 3.32 43.39 3.77
1029 1345 1.536073 CGACCAAGAGCCACAGGAGA 61.536 60.000 0.00 0.00 0.00 3.71
1071 1390 3.314331 CAGACCACTGGCTCCGGT 61.314 66.667 0.00 0.00 40.14 5.28
1137 1456 2.441532 TCCGGGAAGGAGCCGTAG 60.442 66.667 0.00 0.00 45.98 3.51
1619 1938 2.105128 CGTCCAGGTCAGGATCGC 59.895 66.667 0.00 0.00 40.42 4.58
1682 2001 2.579873 GGCCACGTAGACATAGGTAGA 58.420 52.381 0.00 0.00 0.00 2.59
1683 2002 1.612463 GGGCCACGTAGACATAGGTAG 59.388 57.143 4.39 0.00 0.00 3.18
1684 2003 1.063792 TGGGCCACGTAGACATAGGTA 60.064 52.381 0.00 0.00 0.00 3.08
1685 2004 0.324923 TGGGCCACGTAGACATAGGT 60.325 55.000 0.00 0.00 0.00 3.08
1686 2005 0.828022 TTGGGCCACGTAGACATAGG 59.172 55.000 5.23 0.00 0.00 2.57
1693 2012 1.439679 GAGTTTCTTGGGCCACGTAG 58.560 55.000 5.23 0.19 0.00 3.51
1710 2046 1.807814 ACTTAGGTAGGGCATGGGAG 58.192 55.000 0.00 0.00 0.00 4.30
1714 2050 5.453480 GGAAGAAGTACTTAGGTAGGGCATG 60.453 48.000 8.42 0.00 39.13 4.06
1715 2051 4.654724 GGAAGAAGTACTTAGGTAGGGCAT 59.345 45.833 8.42 0.00 39.13 4.40
1724 2060 7.725818 AAAAAGAACCGGAAGAAGTACTTAG 57.274 36.000 9.46 0.00 39.13 2.18
1754 3562 7.412063 CGATGAATAGATTGCATGTTTTCTGA 58.588 34.615 0.00 0.00 0.00 3.27
1757 3565 5.972973 TGCGATGAATAGATTGCATGTTTTC 59.027 36.000 0.00 0.00 37.74 2.29
1762 3570 4.744136 AGTGCGATGAATAGATTGCATG 57.256 40.909 0.00 0.00 43.23 4.06
1765 3573 5.657470 TTGTAGTGCGATGAATAGATTGC 57.343 39.130 0.00 0.00 33.81 3.56
1766 3574 7.412137 TCATTGTAGTGCGATGAATAGATTG 57.588 36.000 8.57 0.00 43.18 2.67
1778 4102 5.794687 TTTCTGGTATTCATTGTAGTGCG 57.205 39.130 0.00 0.00 0.00 5.34
2075 4405 1.103803 TGTGTCTCCGGCAGATCTAC 58.896 55.000 0.00 0.00 32.08 2.59
2238 4576 3.243168 GGGCTCCGTTTTTAGTCGTTTTT 60.243 43.478 0.00 0.00 0.00 1.94
2239 4577 2.291465 GGGCTCCGTTTTTAGTCGTTTT 59.709 45.455 0.00 0.00 0.00 2.43
2240 4578 1.875514 GGGCTCCGTTTTTAGTCGTTT 59.124 47.619 0.00 0.00 0.00 3.60
2241 4579 1.071228 AGGGCTCCGTTTTTAGTCGTT 59.929 47.619 0.00 0.00 0.00 3.85
2270 4611 2.971598 CGGTGGATCCTGGCAAGGT 61.972 63.158 14.23 0.00 44.82 3.50
2389 4730 4.120946 AGGCAATTGGGTTGGTAGTAAA 57.879 40.909 7.72 0.00 38.29 2.01
2393 4734 2.024414 GCTAGGCAATTGGGTTGGTAG 58.976 52.381 7.72 0.00 38.29 3.18
2394 4735 1.356059 TGCTAGGCAATTGGGTTGGTA 59.644 47.619 7.72 0.00 38.29 3.25
2395 4736 0.114168 TGCTAGGCAATTGGGTTGGT 59.886 50.000 7.72 0.00 38.29 3.67
2396 4737 1.265236 TTGCTAGGCAATTGGGTTGG 58.735 50.000 7.72 0.00 43.99 3.77
2406 4747 0.680921 GCACAAGGGATTGCTAGGCA 60.681 55.000 0.00 0.00 35.74 4.75
2413 4754 8.976197 CTGGAAGAAAATCGCACAAGGGATTG 62.976 46.154 8.27 0.00 45.97 2.67
2415 4756 5.642117 CTGGAAGAAAATCGCACAAGGGAT 61.642 45.833 0.00 0.00 42.67 3.85
2416 4757 2.159382 GGAAGAAAATCGCACAAGGGA 58.841 47.619 0.00 0.00 41.28 4.20
2417 4758 1.885887 TGGAAGAAAATCGCACAAGGG 59.114 47.619 0.00 0.00 0.00 3.95
2418 4759 2.554032 ACTGGAAGAAAATCGCACAAGG 59.446 45.455 0.00 0.00 37.43 3.61
2419 4760 3.904136 ACTGGAAGAAAATCGCACAAG 57.096 42.857 0.00 0.00 37.43 3.16
2420 4761 3.882888 AGAACTGGAAGAAAATCGCACAA 59.117 39.130 0.00 0.00 37.43 3.33
2422 4763 4.489679 AAGAACTGGAAGAAAATCGCAC 57.510 40.909 0.00 0.00 37.43 5.34
2423 4764 5.514274 AAAAGAACTGGAAGAAAATCGCA 57.486 34.783 0.00 0.00 37.43 5.10
2424 4765 7.924103 TTAAAAAGAACTGGAAGAAAATCGC 57.076 32.000 0.00 0.00 37.43 4.58
2425 4766 9.899226 AGATTAAAAAGAACTGGAAGAAAATCG 57.101 29.630 0.00 0.00 37.43 3.34
2427 4768 9.481340 GCAGATTAAAAAGAACTGGAAGAAAAT 57.519 29.630 0.00 0.00 37.43 1.82
2428 4769 8.474025 TGCAGATTAAAAAGAACTGGAAGAAAA 58.526 29.630 0.00 0.00 37.43 2.29
2429 4770 8.006298 TGCAGATTAAAAAGAACTGGAAGAAA 57.994 30.769 0.00 0.00 37.43 2.52
2431 4772 7.765695 ATGCAGATTAAAAAGAACTGGAAGA 57.234 32.000 0.00 0.00 37.43 2.87
2536 4877 9.949174 CATGTCATAATGAATCCGACAATTTTA 57.051 29.630 0.00 0.00 39.80 1.52
2545 4886 8.818141 AACTAGTACATGTCATAATGAATCCG 57.182 34.615 0.00 0.00 0.00 4.18
2634 4975 9.868277 ATTTGTGTCAAGTCAAGATTTACAAAA 57.132 25.926 0.00 0.00 38.49 2.44
2652 4993 9.478019 CTCGTGTCATTTTATTAGATTTGTGTC 57.522 33.333 0.00 0.00 0.00 3.67
2659 5000 7.125792 ACTCCCTCGTGTCATTTTATTAGAT 57.874 36.000 0.00 0.00 0.00 1.98
2661 5002 7.490000 AGTACTCCCTCGTGTCATTTTATTAG 58.510 38.462 0.00 0.00 0.00 1.73
2683 5034 7.109501 TCCCTACGTATTGTACTTGTGTAGTA 58.890 38.462 0.00 0.00 38.33 1.82
2688 5039 7.605410 AAAATCCCTACGTATTGTACTTGTG 57.395 36.000 0.00 0.00 0.00 3.33
2741 5092 3.365265 GTGGGCTTGCACGGGAAG 61.365 66.667 0.00 0.00 0.00 3.46
2772 5123 1.135094 CATCCTCCCTGGCTGTGTAT 58.865 55.000 0.00 0.00 35.26 2.29
2776 5127 2.976490 GCACATCCTCCCTGGCTGT 61.976 63.158 0.00 0.00 45.16 4.40
2783 5134 2.103263 AGACGATTTAGCACATCCTCCC 59.897 50.000 0.00 0.00 0.00 4.30
2831 5394 1.807886 GGCGTCGTCTCACCAGTAT 59.192 57.895 0.00 0.00 0.00 2.12
2864 5427 3.614092 AGGCACTGTATGTGGAAAGATG 58.386 45.455 0.00 0.00 46.27 2.90
3148 5714 1.003839 GTCATTGAGGCCGTCACCA 60.004 57.895 0.00 0.00 33.71 4.17
3320 5886 1.219522 CCCGTGAACAAGTGACCGTC 61.220 60.000 0.00 0.00 0.00 4.79
3392 5959 0.403271 AGCATGTCTTCTGGGCTGTT 59.597 50.000 0.00 0.00 32.76 3.16
3631 6198 8.467963 TCCGGTAGTATGTTATATCAAAGTCA 57.532 34.615 0.00 0.00 0.00 3.41
3784 6351 1.376812 GGCCTTGGGGTACTTGTCG 60.377 63.158 0.00 0.00 34.45 4.35
3824 6391 3.138798 ATCGGCGTCGTACCTGCT 61.139 61.111 10.18 0.00 37.69 4.24
3836 6403 2.147150 GCTAGAGAAAATCCCATCGGC 58.853 52.381 0.00 0.00 0.00 5.54
3919 6486 0.678048 AGACGCAAAGCCCCTCAATC 60.678 55.000 0.00 0.00 0.00 2.67
4139 6713 5.301551 AGAAACAACATTGCATAGGACACAA 59.698 36.000 0.00 0.00 0.00 3.33
4152 6726 7.054124 TGGTCTCTCAGTAAAGAAACAACATT 58.946 34.615 0.00 0.00 0.00 2.71
4190 6776 7.816031 CGTAGAGTAAAACATAAACCAGAAGGA 59.184 37.037 0.00 0.00 38.69 3.36
4198 6784 6.798476 GCAAACCCGTAGAGTAAAACATAAAC 59.202 38.462 0.00 0.00 0.00 2.01
4208 6794 5.419788 TGAGAATTAGCAAACCCGTAGAGTA 59.580 40.000 0.00 0.00 0.00 2.59
4237 6823 5.931532 ACTTTGTTAATTCTCATGCAGACG 58.068 37.500 0.00 0.00 0.00 4.18
4263 6849 9.755804 CTAATCAACTCATGCAGAAGTTAGATA 57.244 33.333 14.21 8.14 0.00 1.98
4318 6906 1.229428 CGTTGGACTCACATGCACTT 58.771 50.000 0.00 0.00 0.00 3.16
4327 6915 1.686355 AACCATTTGCGTTGGACTCA 58.314 45.000 6.41 0.00 37.69 3.41
4393 6981 4.133820 TGTGAGGTTGTTGAAACGATGAT 58.866 39.130 0.00 0.00 0.00 2.45
4415 7003 4.863548 TGCTCCAAATCAAGATCCTTGAT 58.136 39.130 14.44 14.44 40.57 2.57
4445 7033 6.294675 CCATGCTCTAAGTTTCCATTGAACAA 60.295 38.462 0.00 0.00 0.00 2.83
4474 7062 7.554118 ACGTATAGCCAACAACTAACTCTACTA 59.446 37.037 0.00 0.00 0.00 1.82
4479 7067 5.636543 ACAACGTATAGCCAACAACTAACTC 59.363 40.000 0.00 0.00 0.00 3.01
4483 7071 4.152759 GCAACAACGTATAGCCAACAACTA 59.847 41.667 0.00 0.00 0.00 2.24
4542 7130 4.955811 TGAAGTGGGCCATAGTAGTATG 57.044 45.455 10.70 10.21 36.52 2.39
4572 7164 6.939730 TGTATCATGTGCTCCTTGAAACTTTA 59.060 34.615 0.00 0.00 31.69 1.85
4598 7190 3.654414 GGGTTGTAGATGAATAGCGAGG 58.346 50.000 0.00 0.00 0.00 4.63
4601 7193 3.093717 ACGGGTTGTAGATGAATAGCG 57.906 47.619 0.00 0.00 0.00 4.26
4603 7195 8.888579 AAGATAAACGGGTTGTAGATGAATAG 57.111 34.615 0.00 0.00 0.00 1.73
4620 7212 6.750039 CGAGTTGAAGGAGAGAGAAGATAAAC 59.250 42.308 0.00 0.00 0.00 2.01
4621 7213 6.127591 CCGAGTTGAAGGAGAGAGAAGATAAA 60.128 42.308 0.00 0.00 0.00 1.40
4660 7252 9.871238 GATTGAAGCGGACTATAAGGATATAAA 57.129 33.333 0.00 0.00 0.00 1.40
4666 7258 4.202223 GGTGATTGAAGCGGACTATAAGGA 60.202 45.833 0.00 0.00 0.00 3.36
4677 7269 6.250819 CAAGTACAATAAGGTGATTGAAGCG 58.749 40.000 3.27 0.00 38.83 4.68
4682 7274 6.992063 AGAGCAAGTACAATAAGGTGATTG 57.008 37.500 0.00 0.00 41.69 2.67
4683 7275 6.375455 CCAAGAGCAAGTACAATAAGGTGATT 59.625 38.462 0.00 0.00 0.00 2.57
4700 7292 3.756434 GGTTATGTAACTTGCCAAGAGCA 59.244 43.478 12.25 7.09 41.79 4.26
4706 7298 4.124238 GCGATAGGTTATGTAACTTGCCA 58.876 43.478 3.22 0.00 36.47 4.92
4717 7309 7.040686 GGTTGGTTTATTGATGCGATAGGTTAT 60.041 37.037 0.00 0.00 0.00 1.89
4723 7315 3.562141 CCGGTTGGTTTATTGATGCGATA 59.438 43.478 0.00 0.00 0.00 2.92
4724 7316 2.357637 CCGGTTGGTTTATTGATGCGAT 59.642 45.455 0.00 0.00 0.00 4.58
4792 7385 0.611714 TTTTGGAGCGGAGGGAGTAC 59.388 55.000 0.00 0.00 0.00 2.73
4793 7386 1.580059 ATTTTGGAGCGGAGGGAGTA 58.420 50.000 0.00 0.00 0.00 2.59
4794 7387 1.209747 GTATTTTGGAGCGGAGGGAGT 59.790 52.381 0.00 0.00 0.00 3.85
4795 7388 1.209504 TGTATTTTGGAGCGGAGGGAG 59.790 52.381 0.00 0.00 0.00 4.30
4796 7389 1.281419 TGTATTTTGGAGCGGAGGGA 58.719 50.000 0.00 0.00 0.00 4.20
4797 7390 2.122783 TTGTATTTTGGAGCGGAGGG 57.877 50.000 0.00 0.00 0.00 4.30
4798 7391 4.513198 TTTTTGTATTTTGGAGCGGAGG 57.487 40.909 0.00 0.00 0.00 4.30
4799 7392 9.450807 CTATTATTTTTGTATTTTGGAGCGGAG 57.549 33.333 0.00 0.00 0.00 4.63
4801 7394 9.796120 TTCTATTATTTTTGTATTTTGGAGCGG 57.204 29.630 0.00 0.00 0.00 5.52
4818 8375 9.050601 GCTACTGCAGTGAATTCTTCTATTATT 57.949 33.333 29.57 0.00 39.41 1.40
4820 8377 7.555965 TGCTACTGCAGTGAATTCTTCTATTA 58.444 34.615 29.57 2.68 45.31 0.98
4850 8407 5.427481 AGCAAATTTACCTAGCCCAGTAGTA 59.573 40.000 0.00 0.00 0.00 1.82
4851 8408 4.227527 AGCAAATTTACCTAGCCCAGTAGT 59.772 41.667 0.00 0.00 0.00 2.73
4852 8409 4.781934 AGCAAATTTACCTAGCCCAGTAG 58.218 43.478 0.00 0.00 0.00 2.57
4887 8444 0.659427 CCACATAATGCCAGCAGTCG 59.341 55.000 0.00 0.00 0.00 4.18
4893 8450 2.026641 CCTTCACCCACATAATGCCAG 58.973 52.381 0.00 0.00 0.00 4.85
4943 8500 7.876582 GGAGTACAATACTGTTTGGTAAGTTCT 59.123 37.037 0.00 0.00 39.59 3.01
4944 8501 7.118825 GGGAGTACAATACTGTTTGGTAAGTTC 59.881 40.741 0.00 0.00 39.59 3.01
4946 8503 6.271624 AGGGAGTACAATACTGTTTGGTAAGT 59.728 38.462 0.00 0.00 39.59 2.24
4947 8504 6.708285 AGGGAGTACAATACTGTTTGGTAAG 58.292 40.000 0.00 0.00 39.59 2.34
4948 8505 6.499350 AGAGGGAGTACAATACTGTTTGGTAA 59.501 38.462 0.00 0.00 39.59 2.85
4949 8506 6.021030 AGAGGGAGTACAATACTGTTTGGTA 58.979 40.000 0.00 0.00 39.59 3.25
4950 8507 4.844655 AGAGGGAGTACAATACTGTTTGGT 59.155 41.667 0.00 0.00 39.59 3.67
4951 8508 5.187967 AGAGAGGGAGTACAATACTGTTTGG 59.812 44.000 0.00 0.00 39.59 3.28
4952 8509 6.287589 AGAGAGGGAGTACAATACTGTTTG 57.712 41.667 0.00 0.00 39.59 2.93
4953 8510 6.380560 GGTAGAGAGGGAGTACAATACTGTTT 59.619 42.308 0.00 0.00 39.59 2.83
4954 8511 5.892686 GGTAGAGAGGGAGTACAATACTGTT 59.107 44.000 0.00 0.00 39.59 3.16
4955 8512 5.447757 GGTAGAGAGGGAGTACAATACTGT 58.552 45.833 0.00 0.00 39.59 3.55
4956 8513 4.515944 CGGTAGAGAGGGAGTACAATACTG 59.484 50.000 0.00 0.00 39.59 2.74
4957 8514 4.165758 ACGGTAGAGAGGGAGTACAATACT 59.834 45.833 0.00 0.00 42.86 2.12
4958 8515 4.459330 ACGGTAGAGAGGGAGTACAATAC 58.541 47.826 0.00 0.00 0.00 1.89
4959 8516 4.785346 ACGGTAGAGAGGGAGTACAATA 57.215 45.455 0.00 0.00 0.00 1.90
4960 8517 3.666345 ACGGTAGAGAGGGAGTACAAT 57.334 47.619 0.00 0.00 0.00 2.71
4961 8518 3.245016 TGAACGGTAGAGAGGGAGTACAA 60.245 47.826 0.00 0.00 0.00 2.41
4962 8519 2.306805 TGAACGGTAGAGAGGGAGTACA 59.693 50.000 0.00 0.00 0.00 2.90
4963 8520 2.944349 CTGAACGGTAGAGAGGGAGTAC 59.056 54.545 0.00 0.00 0.00 2.73
4964 8521 2.683152 GCTGAACGGTAGAGAGGGAGTA 60.683 54.545 0.00 0.00 0.00 2.59
4965 8522 1.956159 GCTGAACGGTAGAGAGGGAGT 60.956 57.143 0.00 0.00 0.00 3.85
4966 8523 0.741915 GCTGAACGGTAGAGAGGGAG 59.258 60.000 0.00 0.00 0.00 4.30
4967 8524 0.331954 AGCTGAACGGTAGAGAGGGA 59.668 55.000 0.00 0.00 0.00 4.20
4968 8525 1.677052 GTAGCTGAACGGTAGAGAGGG 59.323 57.143 0.00 0.00 0.00 4.30
4969 8526 2.614983 GAGTAGCTGAACGGTAGAGAGG 59.385 54.545 0.00 0.00 0.00 3.69
4970 8527 2.614983 GGAGTAGCTGAACGGTAGAGAG 59.385 54.545 0.00 0.00 0.00 3.20
4971 8528 2.026542 TGGAGTAGCTGAACGGTAGAGA 60.027 50.000 0.00 0.00 0.00 3.10
4972 8529 2.366533 TGGAGTAGCTGAACGGTAGAG 58.633 52.381 0.00 0.00 0.00 2.43
4973 8530 2.490903 GTTGGAGTAGCTGAACGGTAGA 59.509 50.000 0.00 0.00 0.00 2.59
4974 8531 2.230508 TGTTGGAGTAGCTGAACGGTAG 59.769 50.000 0.00 0.00 0.00 3.18
4975 8532 2.241160 TGTTGGAGTAGCTGAACGGTA 58.759 47.619 0.00 0.00 0.00 4.02
4976 8533 1.045407 TGTTGGAGTAGCTGAACGGT 58.955 50.000 0.00 0.00 0.00 4.83
4977 8534 1.798813 GTTGTTGGAGTAGCTGAACGG 59.201 52.381 0.00 0.00 0.00 4.44
4978 8535 2.221055 GTGTTGTTGGAGTAGCTGAACG 59.779 50.000 0.00 0.00 0.00 3.95
4979 8536 3.202906 TGTGTTGTTGGAGTAGCTGAAC 58.797 45.455 0.00 0.00 0.00 3.18
4980 8537 3.552132 TGTGTTGTTGGAGTAGCTGAA 57.448 42.857 0.00 0.00 0.00 3.02
4981 8538 3.769739 ATGTGTTGTTGGAGTAGCTGA 57.230 42.857 0.00 0.00 0.00 4.26
4982 8539 6.500684 AAATATGTGTTGTTGGAGTAGCTG 57.499 37.500 0.00 0.00 0.00 4.24
4983 8540 5.351465 CGAAATATGTGTTGTTGGAGTAGCT 59.649 40.000 0.00 0.00 0.00 3.32
4984 8541 5.447279 CCGAAATATGTGTTGTTGGAGTAGC 60.447 44.000 0.00 0.00 0.00 3.58
4985 8542 5.642063 ACCGAAATATGTGTTGTTGGAGTAG 59.358 40.000 0.00 0.00 0.00 2.57
4986 8543 5.553123 ACCGAAATATGTGTTGTTGGAGTA 58.447 37.500 0.00 0.00 0.00 2.59
4987 8544 4.394729 ACCGAAATATGTGTTGTTGGAGT 58.605 39.130 0.00 0.00 0.00 3.85
4988 8545 5.410132 TGTACCGAAATATGTGTTGTTGGAG 59.590 40.000 0.00 0.00 0.00 3.86
4989 8546 5.306394 TGTACCGAAATATGTGTTGTTGGA 58.694 37.500 0.00 0.00 0.00 3.53
4990 8547 5.410132 TCTGTACCGAAATATGTGTTGTTGG 59.590 40.000 0.00 0.00 0.00 3.77
4991 8548 6.402118 CCTCTGTACCGAAATATGTGTTGTTG 60.402 42.308 0.00 0.00 0.00 3.33
4992 8549 5.642063 CCTCTGTACCGAAATATGTGTTGTT 59.358 40.000 0.00 0.00 0.00 2.83
4993 8550 5.175859 CCTCTGTACCGAAATATGTGTTGT 58.824 41.667 0.00 0.00 0.00 3.32
4994 8551 4.570772 CCCTCTGTACCGAAATATGTGTTG 59.429 45.833 0.00 0.00 0.00 3.33
4995 8552 4.468510 TCCCTCTGTACCGAAATATGTGTT 59.531 41.667 0.00 0.00 0.00 3.32
4996 8553 4.028131 TCCCTCTGTACCGAAATATGTGT 58.972 43.478 0.00 0.00 0.00 3.72
4997 8554 4.099573 ACTCCCTCTGTACCGAAATATGTG 59.900 45.833 0.00 0.00 0.00 3.21
4998 8555 4.287552 ACTCCCTCTGTACCGAAATATGT 58.712 43.478 0.00 0.00 0.00 2.29
4999 8556 4.939052 ACTCCCTCTGTACCGAAATATG 57.061 45.455 0.00 0.00 0.00 1.78
5000 8557 8.716674 TTTATACTCCCTCTGTACCGAAATAT 57.283 34.615 0.00 0.00 0.00 1.28
5001 8558 8.537728 TTTTATACTCCCTCTGTACCGAAATA 57.462 34.615 0.00 0.00 0.00 1.40
5002 8559 7.427989 TTTTATACTCCCTCTGTACCGAAAT 57.572 36.000 0.00 0.00 0.00 2.17
5003 8560 6.855763 TTTTATACTCCCTCTGTACCGAAA 57.144 37.500 0.00 0.00 0.00 3.46
5004 8561 6.855763 TTTTTATACTCCCTCTGTACCGAA 57.144 37.500 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.