Multiple sequence alignment - TraesCS4B01G384700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G384700 chr4B 100.000 2782 0 0 1 2782 663943158 663940377 0.000000e+00 5138.0
1 TraesCS4B01G384700 chr4B 100.000 294 0 0 3027 3320 663940132 663939839 8.100000e-151 544.0
2 TraesCS4B01G384700 chr4B 86.250 80 9 2 1 78 119327108 119327029 5.900000e-13 86.1
3 TraesCS4B01G384700 chr5D 85.239 691 72 16 989 1674 481183680 481184345 0.000000e+00 684.0
4 TraesCS4B01G384700 chr5D 83.880 701 85 16 989 1676 481302948 481303633 0.000000e+00 643.0
5 TraesCS4B01G384700 chr5D 84.783 552 66 4 1770 2318 481426365 481426901 3.770000e-149 538.0
6 TraesCS4B01G384700 chr5D 83.919 541 76 5 1784 2318 481303659 481304194 1.060000e-139 507.0
7 TraesCS4B01G384700 chr5D 83.393 560 65 11 1784 2318 481184398 481184954 8.270000e-136 494.0
8 TraesCS4B01G384700 chr5D 83.614 415 52 9 1265 1676 481425933 481426334 3.130000e-100 375.0
9 TraesCS4B01G384700 chr5D 89.286 252 24 1 989 1240 481425516 481425764 2.490000e-81 313.0
10 TraesCS4B01G384700 chr5B 83.754 714 81 17 989 1673 589894279 589894986 0.000000e+00 643.0
11 TraesCS4B01G384700 chr5B 83.006 712 82 23 989 1676 589998360 589999056 2.830000e-170 608.0
12 TraesCS4B01G384700 chr5B 85.000 560 59 12 1770 2318 589999087 589999632 2.250000e-151 545.0
13 TraesCS4B01G384700 chr5B 90.503 358 33 1 1320 1676 589677262 589677619 3.880000e-129 472.0
14 TraesCS4B01G384700 chr5B 82.122 509 67 9 1834 2318 589677697 589678205 6.630000e-112 414.0
15 TraesCS4B01G384700 chr5B 74.176 364 64 14 2419 2777 491973441 491973779 1.250000e-24 124.0
16 TraesCS4B01G384700 chr5A 83.803 710 80 24 989 1676 600361481 600362177 2.790000e-180 641.0
17 TraesCS4B01G384700 chr5A 83.476 702 81 19 988 1676 600438339 600439018 3.640000e-174 621.0
18 TraesCS4B01G384700 chr5A 86.345 498 58 6 1829 2318 600362253 600362748 4.880000e-148 534.0
19 TraesCS4B01G384700 chr5A 85.020 494 51 15 1829 2318 600439072 600439546 6.440000e-132 481.0
20 TraesCS4B01G384700 chr5A 82.296 514 64 10 1829 2318 600237655 600238165 1.420000e-113 420.0
21 TraesCS4B01G384700 chr4D 90.249 482 37 5 1883 2355 506482766 506483246 3.640000e-174 621.0
22 TraesCS4B01G384700 chr4D 84.418 584 42 14 308 843 506470112 506470694 2.270000e-146 529.0
23 TraesCS4B01G384700 chr4D 90.432 324 30 1 960 1283 506470727 506471049 3.060000e-115 425.0
24 TraesCS4B01G384700 chr4D 83.650 263 30 7 3 264 506469854 506470104 5.540000e-58 235.0
25 TraesCS4B01G384700 chr4D 91.339 127 8 1 1762 1885 506471106 506471232 1.580000e-38 171.0
26 TraesCS4B01G384700 chr7B 85.782 422 46 8 2355 2774 610648361 610648770 5.090000e-118 435.0
27 TraesCS4B01G384700 chr7B 84.651 430 46 12 2356 2777 610649818 610650235 8.570000e-111 411.0
28 TraesCS4B01G384700 chr7B 80.548 365 59 11 2422 2780 747192492 747192134 1.520000e-68 270.0
29 TraesCS4B01G384700 chr1B 84.346 428 51 15 2356 2780 463819801 463819387 3.990000e-109 405.0
30 TraesCS4B01G384700 chr1B 83.962 424 44 16 2356 2777 463818352 463817951 5.200000e-103 385.0
31 TraesCS4B01G384700 chr1B 89.686 223 20 3 2502 2724 13026824 13026605 7.010000e-72 281.0
32 TraesCS4B01G384700 chr4A 85.827 381 42 4 2395 2775 718269074 718268706 8.630000e-106 394.0
33 TraesCS4B01G384700 chr4A 100.000 29 0 0 3048 3076 698864028 698864000 2.000000e-03 54.7
34 TraesCS4B01G384700 chrUn 87.582 306 32 5 2470 2774 43370318 43370618 1.900000e-92 350.0
35 TraesCS4B01G384700 chrUn 86.774 310 35 5 2469 2777 43368873 43369177 1.140000e-89 340.0
36 TraesCS4B01G384700 chr6D 80.155 388 52 16 2397 2780 5664725 5664359 1.960000e-67 267.0
37 TraesCS4B01G384700 chr2B 96.154 52 2 0 1692 1743 423172 423121 5.900000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G384700 chr4B 663939839 663943158 3319 True 2841.000000 5138 100.000000 1 3320 2 chr4B.!!$R2 3319
1 TraesCS4B01G384700 chr5D 481183680 481184954 1274 False 589.000000 684 84.316000 989 2318 2 chr5D.!!$F1 1329
2 TraesCS4B01G384700 chr5D 481302948 481304194 1246 False 575.000000 643 83.899500 989 2318 2 chr5D.!!$F2 1329
3 TraesCS4B01G384700 chr5D 481425516 481426901 1385 False 408.666667 538 85.894333 989 2318 3 chr5D.!!$F3 1329
4 TraesCS4B01G384700 chr5B 589894279 589894986 707 False 643.000000 643 83.754000 989 1673 1 chr5B.!!$F2 684
5 TraesCS4B01G384700 chr5B 589998360 589999632 1272 False 576.500000 608 84.003000 989 2318 2 chr5B.!!$F4 1329
6 TraesCS4B01G384700 chr5B 589677262 589678205 943 False 443.000000 472 86.312500 1320 2318 2 chr5B.!!$F3 998
7 TraesCS4B01G384700 chr5A 600361481 600362748 1267 False 587.500000 641 85.074000 989 2318 2 chr5A.!!$F2 1329
8 TraesCS4B01G384700 chr5A 600438339 600439546 1207 False 551.000000 621 84.248000 988 2318 2 chr5A.!!$F3 1330
9 TraesCS4B01G384700 chr5A 600237655 600238165 510 False 420.000000 420 82.296000 1829 2318 1 chr5A.!!$F1 489
10 TraesCS4B01G384700 chr4D 506469854 506471232 1378 False 340.000000 529 87.459750 3 1885 4 chr4D.!!$F2 1882
11 TraesCS4B01G384700 chr7B 610648361 610650235 1874 False 423.000000 435 85.216500 2355 2777 2 chr7B.!!$F1 422
12 TraesCS4B01G384700 chr1B 463817951 463819801 1850 True 395.000000 405 84.154000 2356 2780 2 chr1B.!!$R2 424
13 TraesCS4B01G384700 chrUn 43368873 43370618 1745 False 345.000000 350 87.178000 2469 2777 2 chrUn.!!$F1 308

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
78 80 0.107508 CGAGCTGACATGGGAATGGT 60.108 55.0 0.00 0.0 0.00 3.55 F
1089 1159 0.037303 AGGAAGAGGACGACGTGGTA 59.963 55.0 4.58 0.0 0.00 3.25 F
1860 2150 0.178891 AGGAGGTGTGGACCATCTGT 60.179 55.0 0.00 0.0 45.98 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1700 1972 0.038159 GGTCGATCCTATGGGCGAAG 60.038 60.0 0.0 0.0 33.52 3.79 R
1973 2290 0.108992 GTTCATGTACTCGTGGCCGA 60.109 55.0 0.0 0.0 41.73 5.54 R
3097 4749 0.034896 ACCGTTCATCCAGGTGTGTC 59.965 55.0 0.0 0.0 36.81 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 60 3.353836 CACGTGGCAAACCCCTCG 61.354 66.667 7.95 1.65 44.81 4.63
65 67 3.121030 CAAACCCCTCGCGAGCTG 61.121 66.667 30.49 23.49 0.00 4.24
69 71 3.842923 CCCCTCGCGAGCTGACAT 61.843 66.667 30.49 0.00 0.00 3.06
74 76 2.125552 CGCGAGCTGACATGGGAA 60.126 61.111 0.00 0.00 0.00 3.97
75 77 1.522355 CGCGAGCTGACATGGGAAT 60.522 57.895 0.00 0.00 0.00 3.01
77 79 1.442526 GCGAGCTGACATGGGAATGG 61.443 60.000 0.00 0.00 0.00 3.16
78 80 0.107508 CGAGCTGACATGGGAATGGT 60.108 55.000 0.00 0.00 0.00 3.55
79 81 1.386533 GAGCTGACATGGGAATGGTG 58.613 55.000 0.00 0.00 0.00 4.17
80 82 0.700564 AGCTGACATGGGAATGGTGT 59.299 50.000 0.00 0.00 0.00 4.16
101 103 3.105514 CGTTAACGGCCGTTGACTA 57.894 52.632 43.36 29.26 40.83 2.59
104 106 1.988467 GTTAACGGCCGTTGACTACTC 59.012 52.381 42.02 25.46 40.16 2.59
112 114 1.300971 CGTTGACTACTCGGTCGGGA 61.301 60.000 0.00 0.00 38.91 5.14
132 134 2.668632 GTCCTGGTCGGAATGGCA 59.331 61.111 0.00 0.00 45.32 4.92
134 136 2.819595 CCTGGTCGGAATGGCACG 60.820 66.667 0.00 0.00 33.16 5.34
141 143 2.677003 CGGAATGGCACGTTCGCTT 61.677 57.895 0.00 0.00 0.00 4.68
142 144 1.579429 GGAATGGCACGTTCGCTTT 59.421 52.632 0.00 0.00 0.00 3.51
156 158 2.066262 TCGCTTTTTAGTGAAGGAGCG 58.934 47.619 16.30 16.30 45.30 5.03
176 178 1.071299 TTCCTTCAAGCGCTGCTGA 59.929 52.632 12.58 9.69 39.62 4.26
177 179 1.230635 TTCCTTCAAGCGCTGCTGAC 61.231 55.000 12.58 0.00 39.62 3.51
178 180 2.684843 CCTTCAAGCGCTGCTGACC 61.685 63.158 12.58 0.00 39.62 4.02
191 193 1.153449 CTGACCGCCATTCGCCTTA 60.153 57.895 0.00 0.00 36.73 2.69
192 194 1.429148 CTGACCGCCATTCGCCTTAC 61.429 60.000 0.00 0.00 36.73 2.34
193 195 1.448893 GACCGCCATTCGCCTTACA 60.449 57.895 0.00 0.00 36.73 2.41
194 196 1.429148 GACCGCCATTCGCCTTACAG 61.429 60.000 0.00 0.00 36.73 2.74
195 197 2.709475 CGCCATTCGCCTTACAGC 59.291 61.111 0.00 0.00 0.00 4.40
220 222 4.996758 GCTGCAAAGTTTATGGGAAAACAT 59.003 37.500 0.00 0.00 40.97 2.71
226 228 9.135843 GCAAAGTTTATGGGAAAACATAAGTAC 57.864 33.333 2.68 0.00 42.40 2.73
289 291 7.503549 GCTTTTTAGAGCATTGAACTTCATC 57.496 36.000 0.00 0.00 42.25 2.92
290 292 7.311408 GCTTTTTAGAGCATTGAACTTCATCT 58.689 34.615 0.00 0.00 42.25 2.90
291 293 7.484324 GCTTTTTAGAGCATTGAACTTCATCTC 59.516 37.037 0.00 1.17 42.25 2.75
292 294 8.627208 TTTTTAGAGCATTGAACTTCATCTCT 57.373 30.769 16.44 16.44 34.60 3.10
293 295 8.627208 TTTTAGAGCATTGAACTTCATCTCTT 57.373 30.769 17.01 7.80 33.35 2.85
294 296 8.627208 TTTAGAGCATTGAACTTCATCTCTTT 57.373 30.769 17.01 4.61 33.35 2.52
295 297 8.627208 TTAGAGCATTGAACTTCATCTCTTTT 57.373 30.769 17.01 4.33 33.35 2.27
296 298 7.143514 AGAGCATTGAACTTCATCTCTTTTC 57.856 36.000 10.56 0.00 29.75 2.29
297 299 6.941436 AGAGCATTGAACTTCATCTCTTTTCT 59.059 34.615 10.56 0.47 29.75 2.52
298 300 7.447853 AGAGCATTGAACTTCATCTCTTTTCTT 59.552 33.333 10.56 0.00 29.75 2.52
299 301 7.949434 AGCATTGAACTTCATCTCTTTTCTTT 58.051 30.769 0.00 0.00 0.00 2.52
300 302 9.071276 AGCATTGAACTTCATCTCTTTTCTTTA 57.929 29.630 0.00 0.00 0.00 1.85
301 303 9.122613 GCATTGAACTTCATCTCTTTTCTTTAC 57.877 33.333 0.00 0.00 0.00 2.01
358 363 7.397892 TTCAGGAACAAATCAAACACTAACA 57.602 32.000 0.00 0.00 0.00 2.41
365 370 7.346751 ACAAATCAAACACTAACAGGAACAT 57.653 32.000 0.00 0.00 0.00 2.71
371 376 3.550820 ACACTAACAGGAACATGCACAA 58.449 40.909 0.00 0.00 0.00 3.33
379 384 7.856145 AACAGGAACATGCACAAAATAAAAA 57.144 28.000 0.00 0.00 0.00 1.94
382 387 7.335422 ACAGGAACATGCACAAAATAAAAACAA 59.665 29.630 0.00 0.00 0.00 2.83
386 391 9.553418 GAACATGCACAAAATAAAAACAAACTT 57.447 25.926 0.00 0.00 0.00 2.66
389 394 9.552114 CATGCACAAAATAAAAACAAACTTTCA 57.448 25.926 0.00 0.00 0.00 2.69
391 396 9.950680 TGCACAAAATAAAAACAAACTTTCAAA 57.049 22.222 0.00 0.00 0.00 2.69
501 514 6.037940 CACATGACTGATGGGATTAAACAGAG 59.962 42.308 0.00 0.00 37.74 3.35
509 522 1.410224 GGATTAAACAGAGGCCTGGGG 60.410 57.143 12.00 0.59 44.60 4.96
562 579 7.177041 TGTTACACACACACCTCATACTATGTA 59.823 37.037 0.00 0.00 0.00 2.29
564 581 6.806751 ACACACACACCTCATACTATGTATC 58.193 40.000 0.00 0.00 0.00 2.24
570 587 8.486210 ACACACCTCATACTATGTATCACAAAT 58.514 33.333 0.00 0.00 0.00 2.32
571 588 9.981114 CACACCTCATACTATGTATCACAAATA 57.019 33.333 0.00 0.00 0.00 1.40
581 598 9.177608 ACTATGTATCACAAATACACATGCTTT 57.822 29.630 0.00 0.00 37.33 3.51
621 638 7.814642 TCAGATTCAAGAGAAATCAAAAGAGC 58.185 34.615 0.00 0.00 37.29 4.09
632 649 8.429493 AGAAATCAAAAGAGCAAAAAGAAAGG 57.571 30.769 0.00 0.00 0.00 3.11
638 655 3.560105 AGAGCAAAAAGAAAGGTCTGCT 58.440 40.909 0.00 0.00 38.55 4.24
639 656 3.317430 AGAGCAAAAAGAAAGGTCTGCTG 59.683 43.478 0.00 0.00 38.55 4.41
640 657 3.290710 AGCAAAAAGAAAGGTCTGCTGA 58.709 40.909 0.00 0.00 33.05 4.26
641 658 3.317430 AGCAAAAAGAAAGGTCTGCTGAG 59.683 43.478 0.00 0.00 33.05 3.35
642 659 3.067320 GCAAAAAGAAAGGTCTGCTGAGT 59.933 43.478 0.00 0.00 33.05 3.41
644 661 5.561725 GCAAAAAGAAAGGTCTGCTGAGTAG 60.562 44.000 0.00 0.00 33.05 2.57
664 696 2.145865 CCTCAGTTCCCTGTGGTGT 58.854 57.895 3.28 0.00 44.03 4.16
687 719 0.247460 TCCTGCATGTCAGTTCCTCG 59.753 55.000 13.67 1.39 41.25 4.63
704 736 3.006430 TCCTCGTTTGACAGCATCAGTTA 59.994 43.478 0.00 0.00 38.99 2.24
771 821 3.681593 TGTTTATCCAAGTGCACCTACC 58.318 45.455 14.63 0.00 0.00 3.18
774 824 0.844661 ATCCAAGTGCACCTACCCCA 60.845 55.000 14.63 0.00 0.00 4.96
786 836 2.367202 TACCCCAGGTAGCAGCAGC 61.367 63.158 0.00 0.00 37.09 5.25
795 845 1.003355 TAGCAGCAGCCACACCTTC 60.003 57.895 0.00 0.00 43.56 3.46
808 858 6.483640 CAGCCACACCTTCCTCTTATAAATAC 59.516 42.308 0.00 0.00 0.00 1.89
830 880 5.376625 ACTTGTACTTTTCTCCTGCAATCA 58.623 37.500 0.00 0.00 0.00 2.57
833 883 6.899393 TGTACTTTTCTCCTGCAATCAATT 57.101 33.333 0.00 0.00 0.00 2.32
843 893 8.162878 TCTCCTGCAATCAATTAAATCAGATC 57.837 34.615 0.00 0.00 0.00 2.75
844 894 7.776500 TCTCCTGCAATCAATTAAATCAGATCA 59.224 33.333 0.00 0.00 0.00 2.92
845 895 8.296211 TCCTGCAATCAATTAAATCAGATCAA 57.704 30.769 0.00 0.00 0.00 2.57
849 899 8.035984 TGCAATCAATTAAATCAGATCAAAGCA 58.964 29.630 0.00 0.00 0.00 3.91
850 900 8.875803 GCAATCAATTAAATCAGATCAAAGCAA 58.124 29.630 0.00 0.00 0.00 3.91
863 913 9.412460 TCAGATCAAAGCAATAAAATCATAGGT 57.588 29.630 0.00 0.00 0.00 3.08
864 914 9.459640 CAGATCAAAGCAATAAAATCATAGGTG 57.540 33.333 0.00 0.00 0.00 4.00
865 915 8.139989 AGATCAAAGCAATAAAATCATAGGTGC 58.860 33.333 0.00 0.00 0.00 5.01
866 916 6.264832 TCAAAGCAATAAAATCATAGGTGCG 58.735 36.000 0.00 0.00 35.70 5.34
867 917 6.094742 TCAAAGCAATAAAATCATAGGTGCGA 59.905 34.615 0.00 0.00 35.70 5.10
868 918 5.424121 AGCAATAAAATCATAGGTGCGAC 57.576 39.130 0.00 0.00 35.70 5.19
869 919 5.126067 AGCAATAAAATCATAGGTGCGACT 58.874 37.500 0.00 0.00 35.70 4.18
870 920 5.008019 AGCAATAAAATCATAGGTGCGACTG 59.992 40.000 0.00 0.00 35.70 3.51
871 921 5.751680 CAATAAAATCATAGGTGCGACTGG 58.248 41.667 0.00 0.00 0.00 4.00
872 922 1.668419 AAATCATAGGTGCGACTGGC 58.332 50.000 0.00 0.00 43.96 4.85
873 923 0.179045 AATCATAGGTGCGACTGGCC 60.179 55.000 0.00 0.00 42.61 5.36
874 924 2.369257 ATCATAGGTGCGACTGGCCG 62.369 60.000 0.00 0.00 42.61 6.13
875 925 3.849951 ATAGGTGCGACTGGCCGG 61.850 66.667 11.02 11.02 42.61 6.13
877 927 3.942377 TAGGTGCGACTGGCCGGTA 62.942 63.158 19.73 0.00 42.61 4.02
878 928 4.814294 GGTGCGACTGGCCGGTAG 62.814 72.222 19.73 19.73 42.61 3.18
879 929 3.755628 GTGCGACTGGCCGGTAGA 61.756 66.667 27.18 10.42 42.61 2.59
880 930 2.758327 TGCGACTGGCCGGTAGAT 60.758 61.111 27.18 0.00 42.61 1.98
881 931 2.355986 TGCGACTGGCCGGTAGATT 61.356 57.895 27.18 0.00 42.61 2.40
882 932 1.883084 GCGACTGGCCGGTAGATTG 60.883 63.158 27.18 11.72 34.80 2.67
883 933 1.883084 CGACTGGCCGGTAGATTGC 60.883 63.158 19.73 2.52 0.00 3.56
884 934 1.522569 GACTGGCCGGTAGATTGCT 59.477 57.895 19.73 0.00 0.00 3.91
885 935 0.750850 GACTGGCCGGTAGATTGCTA 59.249 55.000 19.73 0.00 0.00 3.49
886 936 1.344763 GACTGGCCGGTAGATTGCTAT 59.655 52.381 19.73 0.00 0.00 2.97
887 937 2.561419 GACTGGCCGGTAGATTGCTATA 59.439 50.000 19.73 0.00 0.00 1.31
888 938 2.299297 ACTGGCCGGTAGATTGCTATAC 59.701 50.000 18.00 0.00 0.00 1.47
889 939 1.271379 TGGCCGGTAGATTGCTATACG 59.729 52.381 1.90 0.00 32.87 3.06
890 940 1.271656 GGCCGGTAGATTGCTATACGT 59.728 52.381 1.90 0.00 31.86 3.57
891 941 2.325761 GCCGGTAGATTGCTATACGTG 58.674 52.381 1.90 0.00 31.86 4.49
892 942 2.030540 GCCGGTAGATTGCTATACGTGA 60.031 50.000 1.90 0.00 31.86 4.35
893 943 3.551454 GCCGGTAGATTGCTATACGTGAA 60.551 47.826 1.90 0.00 31.86 3.18
894 944 4.613944 CCGGTAGATTGCTATACGTGAAA 58.386 43.478 0.00 0.00 31.86 2.69
895 945 5.045215 CCGGTAGATTGCTATACGTGAAAA 58.955 41.667 0.00 0.00 31.86 2.29
896 946 5.175126 CCGGTAGATTGCTATACGTGAAAAG 59.825 44.000 0.00 0.00 31.86 2.27
897 947 5.332355 CGGTAGATTGCTATACGTGAAAAGC 60.332 44.000 0.00 2.14 35.51 3.51
898 948 5.522460 GGTAGATTGCTATACGTGAAAAGCA 59.478 40.000 0.00 5.04 42.91 3.91
899 949 6.202954 GGTAGATTGCTATACGTGAAAAGCAT 59.797 38.462 14.06 7.10 43.94 3.79
900 950 6.683974 AGATTGCTATACGTGAAAAGCATT 57.316 33.333 14.06 11.45 43.94 3.56
901 951 6.719365 AGATTGCTATACGTGAAAAGCATTC 58.281 36.000 19.37 19.37 43.94 2.67
902 952 5.871465 TTGCTATACGTGAAAAGCATTCA 57.129 34.783 14.06 1.23 43.94 2.57
903 953 5.216566 TGCTATACGTGAAAAGCATTCAC 57.783 39.130 19.76 19.76 43.85 3.18
904 954 4.094294 TGCTATACGTGAAAAGCATTCACC 59.906 41.667 22.23 12.14 44.29 4.02
905 955 4.094294 GCTATACGTGAAAAGCATTCACCA 59.906 41.667 22.23 14.39 44.29 4.17
906 956 4.685169 ATACGTGAAAAGCATTCACCAG 57.315 40.909 22.23 14.95 44.29 4.00
907 957 1.001378 ACGTGAAAAGCATTCACCAGC 60.001 47.619 22.23 5.56 44.29 4.85
908 958 1.267806 CGTGAAAAGCATTCACCAGCT 59.732 47.619 22.23 0.00 44.29 4.24
925 975 5.046910 CCAGCTTGGTTGTGTATAGTTTG 57.953 43.478 0.00 0.00 31.35 2.93
926 976 4.475944 CAGCTTGGTTGTGTATAGTTTGC 58.524 43.478 0.00 0.00 0.00 3.68
927 977 3.506067 AGCTTGGTTGTGTATAGTTTGCC 59.494 43.478 0.00 0.00 0.00 4.52
928 978 3.506067 GCTTGGTTGTGTATAGTTTGCCT 59.494 43.478 0.00 0.00 0.00 4.75
929 979 4.379499 GCTTGGTTGTGTATAGTTTGCCTC 60.379 45.833 0.00 0.00 0.00 4.70
930 980 3.331150 TGGTTGTGTATAGTTTGCCTCG 58.669 45.455 0.00 0.00 0.00 4.63
931 981 2.676342 GGTTGTGTATAGTTTGCCTCGG 59.324 50.000 0.00 0.00 0.00 4.63
932 982 3.592059 GTTGTGTATAGTTTGCCTCGGA 58.408 45.455 0.00 0.00 0.00 4.55
933 983 3.241067 TGTGTATAGTTTGCCTCGGAC 57.759 47.619 0.00 0.00 0.00 4.79
934 984 2.563620 TGTGTATAGTTTGCCTCGGACA 59.436 45.455 0.00 0.00 0.00 4.02
935 985 3.187700 GTGTATAGTTTGCCTCGGACAG 58.812 50.000 0.00 0.00 0.00 3.51
936 986 2.829720 TGTATAGTTTGCCTCGGACAGT 59.170 45.455 0.00 0.00 0.00 3.55
937 987 3.259876 TGTATAGTTTGCCTCGGACAGTT 59.740 43.478 0.00 0.00 0.00 3.16
938 988 4.463539 TGTATAGTTTGCCTCGGACAGTTA 59.536 41.667 0.00 0.00 0.00 2.24
940 990 0.796927 GTTTGCCTCGGACAGTTAGC 59.203 55.000 0.00 0.00 0.00 3.09
944 994 0.525029 GCCTCGGACAGTTAGCGTAC 60.525 60.000 0.00 0.00 0.00 3.67
950 1000 2.180017 CAGTTAGCGTACGGCCGT 59.820 61.111 36.01 36.01 45.17 5.68
951 1001 1.305219 ACAGTTAGCGTACGGCCGTA 61.305 55.000 33.45 33.45 45.17 4.02
957 1007 0.179163 AGCGTACGGCCGTAAAGTAC 60.179 55.000 37.88 26.63 45.17 2.73
958 1008 0.455972 GCGTACGGCCGTAAAGTACA 60.456 55.000 37.88 15.63 40.32 2.90
960 1010 1.400888 CGTACGGCCGTAAAGTACACA 60.401 52.381 37.88 13.96 40.32 3.72
962 1012 0.961019 ACGGCCGTAAAGTACACAGA 59.039 50.000 33.34 0.00 0.00 3.41
969 1024 3.486584 CGTAAAGTACACAGACGAGTCC 58.513 50.000 0.00 0.00 35.59 3.85
971 1026 1.888215 AAGTACACAGACGAGTCCGA 58.112 50.000 0.00 0.00 39.50 4.55
973 1028 1.805345 AGTACACAGACGAGTCCGAAG 59.195 52.381 0.00 0.00 39.50 3.79
980 1035 2.648102 CGAGTCCGAAGCTACGCG 60.648 66.667 3.53 3.53 38.22 6.01
986 1041 2.689766 CGAAGCTACGCGAACAGC 59.310 61.111 15.93 18.22 43.95 4.40
1008 1063 3.774528 AAGGCGGAGATGAGCGCA 61.775 61.111 11.47 0.00 0.00 6.09
1035 1096 3.196469 AGATGGAGAAGTTGATCAGCGAA 59.804 43.478 3.72 0.00 0.00 4.70
1050 1111 0.603975 GCGAAGAGAAGGTGGTGCTT 60.604 55.000 0.00 0.00 0.00 3.91
1089 1159 0.037303 AGGAAGAGGACGACGTGGTA 59.963 55.000 4.58 0.00 0.00 3.25
1179 1249 1.811266 GAAGCCGCTCAGCATCGAA 60.811 57.895 0.00 0.00 34.23 3.71
1242 1313 1.074566 CTCCCCAGCAAGTTCCTTCTT 59.925 52.381 0.00 0.00 0.00 2.52
1243 1314 1.073923 TCCCCAGCAAGTTCCTTCTTC 59.926 52.381 0.00 0.00 0.00 2.87
1244 1315 1.202927 CCCCAGCAAGTTCCTTCTTCA 60.203 52.381 0.00 0.00 0.00 3.02
1247 1318 3.192212 CCCAGCAAGTTCCTTCTTCATTC 59.808 47.826 0.00 0.00 0.00 2.67
1256 1352 6.171921 AGTTCCTTCTTCATTCTGTGATCAG 58.828 40.000 0.00 0.00 42.54 2.90
1261 1482 2.014335 TCATTCTGTGATCAGGTGCG 57.986 50.000 0.00 0.00 41.59 5.34
1285 1508 7.059945 GCGATTTCTTTACATGAACAAGACTTG 59.940 37.037 13.77 13.77 0.00 3.16
1299 1526 7.985184 TGAACAAGACTTGTAATCTTACAGTGT 59.015 33.333 20.85 0.00 44.59 3.55
1311 1555 1.623163 TACAGTGTCATCGTCCACCA 58.377 50.000 0.00 0.00 31.88 4.17
1313 1557 0.318441 CAGTGTCATCGTCCACCAGT 59.682 55.000 0.00 0.00 31.88 4.00
1323 1567 2.231964 TCGTCCACCAGTAAATTACGCT 59.768 45.455 0.00 0.00 0.00 5.07
1328 1572 2.936498 CACCAGTAAATTACGCTGAGGG 59.064 50.000 0.00 0.00 32.39 4.30
1502 1761 3.912907 CTCGGGCTCGGGCGTATT 61.913 66.667 5.94 0.00 39.81 1.89
1506 1765 1.227853 GGGCTCGGGCGTATTGATT 60.228 57.895 0.00 0.00 39.81 2.57
1518 1777 3.128589 GCGTATTGATTGGGCTGAAGAAA 59.871 43.478 0.00 0.00 0.00 2.52
1521 1780 5.297776 CGTATTGATTGGGCTGAAGAAATCT 59.702 40.000 0.00 0.00 31.66 2.40
1535 1794 6.416415 TGAAGAAATCTCTCGTCTACTACCT 58.584 40.000 0.00 0.00 0.00 3.08
1541 1800 2.753452 CTCTCGTCTACTACCTTGGCAA 59.247 50.000 0.00 0.00 0.00 4.52
1542 1801 3.159472 TCTCGTCTACTACCTTGGCAAA 58.841 45.455 0.00 0.00 0.00 3.68
1543 1802 3.767673 TCTCGTCTACTACCTTGGCAAAT 59.232 43.478 0.00 0.00 0.00 2.32
1544 1803 4.222145 TCTCGTCTACTACCTTGGCAAATT 59.778 41.667 0.00 0.00 0.00 1.82
1548 1807 2.579410 ACTACCTTGGCAAATTCGGT 57.421 45.000 12.76 12.76 0.00 4.69
1551 1810 4.400120 ACTACCTTGGCAAATTCGGTAAA 58.600 39.130 14.67 0.00 30.51 2.01
1552 1811 5.014202 ACTACCTTGGCAAATTCGGTAAAT 58.986 37.500 14.67 6.01 30.51 1.40
1592 1851 4.070552 GCACGAGTTCCGCCTCCT 62.071 66.667 0.00 0.00 43.32 3.69
1665 1937 3.047280 GGTCCACGCGTGCATTCA 61.047 61.111 33.17 11.05 0.00 2.57
1676 1948 2.671914 GCGTGCATTCAATTCCACACAT 60.672 45.455 0.00 0.00 0.00 3.21
1691 1963 3.189921 CATGGTCCATGTGGTGCG 58.810 61.111 21.98 0.00 37.12 5.34
1692 1964 1.675310 CATGGTCCATGTGGTGCGT 60.675 57.895 21.98 0.00 37.12 5.24
1693 1965 1.675310 ATGGTCCATGTGGTGCGTG 60.675 57.895 2.68 0.00 36.34 5.34
1694 1966 2.281484 GGTCCATGTGGTGCGTGT 60.281 61.111 0.00 0.00 36.34 4.49
1695 1967 1.896660 GGTCCATGTGGTGCGTGTT 60.897 57.895 0.00 0.00 36.34 3.32
1696 1968 1.452145 GGTCCATGTGGTGCGTGTTT 61.452 55.000 0.00 0.00 36.34 2.83
1697 1969 0.317770 GTCCATGTGGTGCGTGTTTG 60.318 55.000 0.00 0.00 36.34 2.93
1698 1970 0.464554 TCCATGTGGTGCGTGTTTGA 60.465 50.000 0.00 0.00 36.34 2.69
1699 1971 0.383590 CCATGTGGTGCGTGTTTGAA 59.616 50.000 0.00 0.00 32.30 2.69
1700 1972 1.476074 CATGTGGTGCGTGTTTGAAC 58.524 50.000 0.00 0.00 0.00 3.18
1701 1973 1.065401 CATGTGGTGCGTGTTTGAACT 59.935 47.619 0.00 0.00 0.00 3.01
1702 1974 1.169577 TGTGGTGCGTGTTTGAACTT 58.830 45.000 0.00 0.00 0.00 2.66
1703 1975 1.131504 TGTGGTGCGTGTTTGAACTTC 59.868 47.619 0.00 0.00 0.00 3.01
1704 1976 0.375454 TGGTGCGTGTTTGAACTTCG 59.625 50.000 0.00 2.44 0.00 3.79
1705 1977 0.928451 GGTGCGTGTTTGAACTTCGC 60.928 55.000 20.48 20.48 45.23 4.70
1706 1978 0.928451 GTGCGTGTTTGAACTTCGCC 60.928 55.000 22.55 15.22 44.82 5.54
1707 1979 1.370051 GCGTGTTTGAACTTCGCCC 60.370 57.895 18.30 2.21 42.23 6.13
1708 1980 2.018544 CGTGTTTGAACTTCGCCCA 58.981 52.632 0.00 0.00 0.00 5.36
1709 1981 0.591170 CGTGTTTGAACTTCGCCCAT 59.409 50.000 0.00 0.00 0.00 4.00
1710 1982 1.801771 CGTGTTTGAACTTCGCCCATA 59.198 47.619 0.00 0.00 0.00 2.74
1711 1983 2.159707 CGTGTTTGAACTTCGCCCATAG 60.160 50.000 0.00 0.00 0.00 2.23
1712 1984 2.161609 GTGTTTGAACTTCGCCCATAGG 59.838 50.000 0.00 0.00 0.00 2.57
1713 1985 2.039216 TGTTTGAACTTCGCCCATAGGA 59.961 45.455 0.00 0.00 33.47 2.94
1714 1986 3.279434 GTTTGAACTTCGCCCATAGGAT 58.721 45.455 0.00 0.00 33.47 3.24
1715 1987 2.910688 TGAACTTCGCCCATAGGATC 57.089 50.000 0.00 0.00 33.47 3.36
1716 1988 1.068588 TGAACTTCGCCCATAGGATCG 59.931 52.381 0.00 0.00 33.47 3.69
1717 1989 1.340248 GAACTTCGCCCATAGGATCGA 59.660 52.381 0.00 0.00 33.47 3.59
1723 1995 0.687354 GCCCATAGGATCGACCACAT 59.313 55.000 6.78 0.00 42.04 3.21
1724 1996 1.338200 GCCCATAGGATCGACCACATC 60.338 57.143 6.78 0.00 42.04 3.06
1733 2005 2.734276 TCGACCACATCAAATCACGA 57.266 45.000 0.00 0.00 0.00 4.35
1736 2008 2.929398 CGACCACATCAAATCACGATGA 59.071 45.455 7.12 0.00 42.39 2.92
1737 2009 3.370672 CGACCACATCAAATCACGATGAA 59.629 43.478 7.12 0.00 42.39 2.57
1739 2012 4.071423 ACCACATCAAATCACGATGAACA 58.929 39.130 7.12 0.00 42.39 3.18
1740 2013 4.083324 ACCACATCAAATCACGATGAACAC 60.083 41.667 7.12 0.00 42.39 3.32
1741 2014 4.083820 CACATCAAATCACGATGAACACG 58.916 43.478 7.12 0.00 42.39 4.49
1743 2016 1.125930 TCAAATCACGATGAACACGCG 59.874 47.619 3.53 3.53 0.00 6.01
1748 2022 1.061262 CACGATGAACACGCGTACGA 61.061 55.000 21.65 0.00 43.93 3.43
1749 2023 0.385849 ACGATGAACACGCGTACGAA 60.386 50.000 21.65 0.00 43.93 3.85
1750 2024 0.704008 CGATGAACACGCGTACGAAA 59.296 50.000 21.65 0.00 43.93 3.46
1751 2025 1.122859 CGATGAACACGCGTACGAAAA 59.877 47.619 21.65 0.00 43.93 2.29
1752 2026 2.222420 CGATGAACACGCGTACGAAAAT 60.222 45.455 21.65 0.67 43.93 1.82
1753 2027 3.719763 CGATGAACACGCGTACGAAAATT 60.720 43.478 21.65 7.22 43.93 1.82
1756 2030 4.341099 TGAACACGCGTACGAAAATTTTT 58.659 34.783 21.65 1.46 43.93 1.94
1775 2049 2.047179 GAGCAAGGTCACGGTCCC 60.047 66.667 0.00 0.00 0.00 4.46
1860 2150 0.178891 AGGAGGTGTGGACCATCTGT 60.179 55.000 0.00 0.00 45.98 3.41
1861 2151 0.250513 GGAGGTGTGGACCATCTGTC 59.749 60.000 0.00 0.00 45.98 3.51
1909 2202 2.159819 GAAGCAGCAGACGTGGAGGA 62.160 60.000 0.00 0.00 0.00 3.71
1965 2282 3.069318 ACGGGGAGCTTCGAGTCC 61.069 66.667 11.08 2.64 0.00 3.85
1994 2311 1.133598 CGGCCACGAGTACATGAACTA 59.866 52.381 2.24 0.00 44.60 2.24
2058 2393 2.383527 GCACCAGCAGTACGTCAGC 61.384 63.158 0.00 0.00 41.58 4.26
2066 2401 0.817654 CAGTACGTCAGCCAGATGGA 59.182 55.000 2.18 0.00 37.58 3.41
2070 2405 2.265739 GTCAGCCAGATGGACGCA 59.734 61.111 2.18 0.00 37.39 5.24
2169 2513 3.087666 GCCGGAGCCAGAGGAGAAG 62.088 68.421 5.05 0.00 0.00 2.85
2179 2523 2.768527 CCAGAGGAGAAGCCACAGAATA 59.231 50.000 0.00 0.00 40.02 1.75
2182 2526 3.196685 AGAGGAGAAGCCACAGAATACAC 59.803 47.826 0.00 0.00 40.02 2.90
2183 2527 2.237392 AGGAGAAGCCACAGAATACACC 59.763 50.000 0.00 0.00 40.02 4.16
2210 2554 1.592223 CCGTCTCCTTCCACCAGAC 59.408 63.158 0.00 0.00 34.36 3.51
2248 2592 3.646303 GTCGCAGAGAACGATTTTTACG 58.354 45.455 0.00 0.00 42.26 3.18
2299 2652 2.158310 AGGATGATGGAGGTCACCGATA 60.158 50.000 0.00 0.00 0.00 2.92
2318 2671 0.601841 ACGGCAGGGTTTTACGACTG 60.602 55.000 0.00 0.00 0.00 3.51
2319 2672 0.320073 CGGCAGGGTTTTACGACTGA 60.320 55.000 0.00 0.00 32.86 3.41
2320 2673 1.439679 GGCAGGGTTTTACGACTGAG 58.560 55.000 0.00 0.00 32.86 3.35
2321 2674 1.001633 GGCAGGGTTTTACGACTGAGA 59.998 52.381 0.00 0.00 32.86 3.27
2322 2675 2.549349 GGCAGGGTTTTACGACTGAGAA 60.549 50.000 0.00 0.00 32.86 2.87
2323 2676 3.135994 GCAGGGTTTTACGACTGAGAAA 58.864 45.455 0.00 0.00 32.86 2.52
2324 2677 3.186613 GCAGGGTTTTACGACTGAGAAAG 59.813 47.826 0.00 0.00 32.86 2.62
2325 2678 3.186613 CAGGGTTTTACGACTGAGAAAGC 59.813 47.826 0.00 0.00 32.86 3.51
2326 2679 3.071167 AGGGTTTTACGACTGAGAAAGCT 59.929 43.478 0.00 0.00 32.00 3.74
2327 2680 3.186613 GGGTTTTACGACTGAGAAAGCTG 59.813 47.826 0.00 0.00 32.00 4.24
2328 2681 3.364068 GGTTTTACGACTGAGAAAGCTGC 60.364 47.826 0.00 0.00 0.00 5.25
2329 2682 3.386768 TTTACGACTGAGAAAGCTGCT 57.613 42.857 0.00 0.00 0.00 4.24
2330 2683 2.354109 TACGACTGAGAAAGCTGCTG 57.646 50.000 1.35 0.00 0.00 4.41
2331 2684 0.948141 ACGACTGAGAAAGCTGCTGC 60.948 55.000 1.35 7.62 40.05 5.25
2345 2698 3.390521 CTGCTGCTCCCGGGTGTA 61.391 66.667 22.86 17.44 0.00 2.90
2346 2699 3.376935 CTGCTGCTCCCGGGTGTAG 62.377 68.421 29.78 29.78 0.00 2.74
2347 2700 4.162690 GCTGCTCCCGGGTGTAGG 62.163 72.222 32.90 19.37 0.00 3.18
2348 2701 2.683933 CTGCTCCCGGGTGTAGGT 60.684 66.667 27.40 0.00 0.00 3.08
2349 2702 3.000819 TGCTCCCGGGTGTAGGTG 61.001 66.667 22.86 4.42 0.00 4.00
2350 2703 4.468689 GCTCCCGGGTGTAGGTGC 62.469 72.222 22.86 10.65 35.69 5.01
2351 2704 3.000819 CTCCCGGGTGTAGGTGCA 61.001 66.667 22.86 0.00 0.00 4.57
2352 2705 3.310860 CTCCCGGGTGTAGGTGCAC 62.311 68.421 22.86 8.80 38.56 4.57
2370 2723 3.245087 TGCACCTTGTAGGGCAAATAAGA 60.245 43.478 6.46 0.00 40.58 2.10
2372 2725 3.694566 CACCTTGTAGGGCAAATAAGACC 59.305 47.826 0.00 0.00 40.58 3.85
2391 2744 2.814913 CCGTCTAGGGTTTGGGCACC 62.815 65.000 0.00 0.00 43.60 5.01
2509 2862 2.324477 GTCAGCGTGTGTGTGTGC 59.676 61.111 0.00 0.00 0.00 4.57
2510 2863 3.261216 TCAGCGTGTGTGTGTGCG 61.261 61.111 0.00 0.00 0.00 5.34
2540 2893 1.298157 GCCGCATGAGTGTGTTAGCA 61.298 55.000 0.00 0.00 33.99 3.49
2703 3056 2.403378 GCTCGCGGGCATAAAACCA 61.403 57.895 29.34 0.00 0.00 3.67
2712 3065 1.548719 GGCATAAAACCAACTCCACCC 59.451 52.381 0.00 0.00 0.00 4.61
2763 3117 3.701241 GAGCTCGAGGTGAAATACAGAG 58.299 50.000 23.97 0.00 33.14 3.35
2767 3121 5.105146 AGCTCGAGGTGAAATACAGAGAAAT 60.105 40.000 17.85 0.00 32.30 2.17
2777 3131 2.814280 ACAGAGAAATCCGTTCGTGT 57.186 45.000 0.00 0.00 41.52 4.49
2780 3134 1.343465 AGAGAAATCCGTTCGTGTGGT 59.657 47.619 0.00 0.00 41.52 4.16
2781 3135 1.459592 GAGAAATCCGTTCGTGTGGTG 59.540 52.381 0.00 0.00 41.52 4.17
3049 3403 2.368875 TGTGTTCTTTCTCCTCCACTCC 59.631 50.000 0.00 0.00 0.00 3.85
3050 3404 2.368875 GTGTTCTTTCTCCTCCACTCCA 59.631 50.000 0.00 0.00 0.00 3.86
3052 3406 3.071602 TGTTCTTTCTCCTCCACTCCAAG 59.928 47.826 0.00 0.00 0.00 3.61
3053 3407 2.977808 TCTTTCTCCTCCACTCCAAGT 58.022 47.619 0.00 0.00 0.00 3.16
3107 4759 2.203139 TGGCAACGACACACCTGG 60.203 61.111 0.00 0.00 42.51 4.45
3108 4760 2.110213 GGCAACGACACACCTGGA 59.890 61.111 0.00 0.00 0.00 3.86
3110 4762 1.577328 GGCAACGACACACCTGGATG 61.577 60.000 0.00 0.38 0.00 3.51
3112 4764 1.877637 CAACGACACACCTGGATGAA 58.122 50.000 0.00 0.00 0.00 2.57
3115 4767 1.014044 CGACACACCTGGATGAACGG 61.014 60.000 0.00 0.00 0.00 4.44
3121 4773 2.879103 ACCTGGATGAACGGTGAATT 57.121 45.000 0.00 0.00 0.00 2.17
3122 4774 2.711542 ACCTGGATGAACGGTGAATTC 58.288 47.619 0.00 0.00 0.00 2.17
3186 4854 9.883142 TTTTTGACATCAAACAAGACCTAAAAT 57.117 25.926 6.55 0.00 44.56 1.82
3187 4855 9.883142 TTTTGACATCAAACAAGACCTAAAATT 57.117 25.926 6.55 0.00 44.56 1.82
3188 4856 9.883142 TTTGACATCAAACAAGACCTAAAATTT 57.117 25.926 2.89 0.00 40.55 1.82
3189 4857 9.883142 TTGACATCAAACAAGACCTAAAATTTT 57.117 25.926 8.75 8.75 32.11 1.82
3192 4860 9.476202 ACATCAAACAAGACCTAAAATTTTAGC 57.524 29.630 26.10 16.45 38.99 3.09
3193 4861 9.696917 CATCAAACAAGACCTAAAATTTTAGCT 57.303 29.630 26.10 16.62 38.99 3.32
3195 4863 9.744468 TCAAACAAGACCTAAAATTTTAGCTTC 57.256 29.630 26.10 22.77 38.99 3.86
3196 4864 9.750125 CAAACAAGACCTAAAATTTTAGCTTCT 57.250 29.630 26.10 24.12 38.99 2.85
3199 4867 7.867909 ACAAGACCTAAAATTTTAGCTTCTTGC 59.132 33.333 38.20 23.09 46.93 4.01
3200 4868 7.524717 AGACCTAAAATTTTAGCTTCTTGCA 57.475 32.000 26.10 0.00 45.94 4.08
3201 4869 7.951591 AGACCTAAAATTTTAGCTTCTTGCAA 58.048 30.769 26.10 0.00 45.94 4.08
3202 4870 8.421002 AGACCTAAAATTTTAGCTTCTTGCAAA 58.579 29.630 26.10 0.00 45.94 3.68
3203 4871 8.365399 ACCTAAAATTTTAGCTTCTTGCAAAC 57.635 30.769 26.10 0.00 45.94 2.93
3204 4872 8.204160 ACCTAAAATTTTAGCTTCTTGCAAACT 58.796 29.630 26.10 0.00 45.94 2.66
3205 4873 9.045223 CCTAAAATTTTAGCTTCTTGCAAACTT 57.955 29.630 26.10 0.00 45.94 2.66
3208 4876 9.558648 AAAATTTTAGCTTCTTGCAAACTTTTG 57.441 25.926 0.37 0.00 45.94 2.44
3209 4877 7.848223 ATTTTAGCTTCTTGCAAACTTTTGT 57.152 28.000 0.00 0.00 45.94 2.83
3210 4878 6.645700 TTTAGCTTCTTGCAAACTTTTGTG 57.354 33.333 0.00 0.00 45.94 3.33
3211 4879 4.454728 AGCTTCTTGCAAACTTTTGTGA 57.545 36.364 0.00 0.00 45.94 3.58
3212 4880 4.427312 AGCTTCTTGCAAACTTTTGTGAG 58.573 39.130 0.00 2.78 45.94 3.51
3213 4881 3.000623 GCTTCTTGCAAACTTTTGTGAGC 59.999 43.478 0.00 0.00 42.31 4.26
3214 4882 3.865011 TCTTGCAAACTTTTGTGAGCA 57.135 38.095 0.00 0.00 39.92 4.26
3215 4883 4.185467 TCTTGCAAACTTTTGTGAGCAA 57.815 36.364 0.00 0.00 44.78 3.91
3216 4884 4.564041 TCTTGCAAACTTTTGTGAGCAAA 58.436 34.783 0.00 0.00 45.57 3.68
3217 4885 5.177326 TCTTGCAAACTTTTGTGAGCAAAT 58.823 33.333 0.00 0.00 45.57 2.32
3218 4886 6.336566 TCTTGCAAACTTTTGTGAGCAAATA 58.663 32.000 0.00 0.00 45.57 1.40
3219 4887 6.815641 TCTTGCAAACTTTTGTGAGCAAATAA 59.184 30.769 0.00 0.00 45.57 1.40
3220 4888 6.343226 TGCAAACTTTTGTGAGCAAATAAC 57.657 33.333 3.74 0.00 43.26 1.89
3221 4889 5.871524 TGCAAACTTTTGTGAGCAAATAACA 59.128 32.000 3.74 0.00 43.26 2.41
3222 4890 6.538021 TGCAAACTTTTGTGAGCAAATAACAT 59.462 30.769 3.74 0.00 43.26 2.71
3223 4891 7.065563 TGCAAACTTTTGTGAGCAAATAACATT 59.934 29.630 3.74 0.00 43.26 2.71
3224 4892 7.583762 GCAAACTTTTGTGAGCAAATAACATTC 59.416 33.333 3.74 0.00 43.26 2.67
3225 4893 8.819974 CAAACTTTTGTGAGCAAATAACATTCT 58.180 29.630 0.00 0.00 43.26 2.40
3227 4895 9.683069 AACTTTTGTGAGCAAATAACATTCTAG 57.317 29.630 0.00 0.00 43.26 2.43
3228 4896 8.850156 ACTTTTGTGAGCAAATAACATTCTAGT 58.150 29.630 0.00 0.00 43.26 2.57
3231 4899 7.539712 TGTGAGCAAATAACATTCTAGTAGC 57.460 36.000 0.00 0.00 0.00 3.58
3232 4900 6.538742 TGTGAGCAAATAACATTCTAGTAGCC 59.461 38.462 0.00 0.00 0.00 3.93
3233 4901 6.763610 GTGAGCAAATAACATTCTAGTAGCCT 59.236 38.462 0.00 0.00 0.00 4.58
3234 4902 7.281100 GTGAGCAAATAACATTCTAGTAGCCTT 59.719 37.037 0.00 0.00 0.00 4.35
3235 4903 7.495934 TGAGCAAATAACATTCTAGTAGCCTTC 59.504 37.037 0.00 0.00 0.00 3.46
3236 4904 7.338710 AGCAAATAACATTCTAGTAGCCTTCA 58.661 34.615 0.00 0.00 0.00 3.02
3237 4905 7.281100 AGCAAATAACATTCTAGTAGCCTTCAC 59.719 37.037 0.00 0.00 0.00 3.18
3238 4906 7.065803 GCAAATAACATTCTAGTAGCCTTCACA 59.934 37.037 0.00 0.00 0.00 3.58
3239 4907 8.946085 CAAATAACATTCTAGTAGCCTTCACAA 58.054 33.333 0.00 0.00 0.00 3.33
3240 4908 9.515226 AAATAACATTCTAGTAGCCTTCACAAA 57.485 29.630 0.00 0.00 0.00 2.83
3241 4909 9.515226 AATAACATTCTAGTAGCCTTCACAAAA 57.485 29.630 0.00 0.00 0.00 2.44
3242 4910 7.817418 AACATTCTAGTAGCCTTCACAAAAA 57.183 32.000 0.00 0.00 0.00 1.94
3263 4931 7.755582 AAAAACAATCTACTCAAAAGTGCAC 57.244 32.000 9.40 9.40 36.92 4.57
3264 4932 6.449635 AAACAATCTACTCAAAAGTGCACA 57.550 33.333 21.04 0.00 36.92 4.57
3265 4933 6.449635 AACAATCTACTCAAAAGTGCACAA 57.550 33.333 21.04 0.00 36.92 3.33
3266 4934 6.449635 ACAATCTACTCAAAAGTGCACAAA 57.550 33.333 21.04 0.00 36.92 2.83
3267 4935 6.862209 ACAATCTACTCAAAAGTGCACAAAA 58.138 32.000 21.04 0.00 36.92 2.44
3268 4936 7.491682 ACAATCTACTCAAAAGTGCACAAAAT 58.508 30.769 21.04 0.00 36.92 1.82
3269 4937 8.629158 ACAATCTACTCAAAAGTGCACAAAATA 58.371 29.630 21.04 0.04 36.92 1.40
3270 4938 9.630098 CAATCTACTCAAAAGTGCACAAAATAT 57.370 29.630 21.04 1.05 36.92 1.28
3272 4940 9.630098 ATCTACTCAAAAGTGCACAAAATATTG 57.370 29.630 21.04 13.45 38.48 1.90
3273 4941 8.845227 TCTACTCAAAAGTGCACAAAATATTGA 58.155 29.630 21.04 16.52 37.17 2.57
3274 4942 9.462174 CTACTCAAAAGTGCACAAAATATTGAA 57.538 29.630 21.04 5.37 37.17 2.69
3275 4943 8.130307 ACTCAAAAGTGCACAAAATATTGAAC 57.870 30.769 21.04 0.00 35.70 3.18
3276 4944 7.763528 ACTCAAAAGTGCACAAAATATTGAACA 59.236 29.630 21.04 0.00 35.70 3.18
3277 4945 7.904094 TCAAAAGTGCACAAAATATTGAACAC 58.096 30.769 21.04 9.21 41.68 3.32
3278 4946 6.843069 AAAGTGCACAAAATATTGAACACC 57.157 33.333 21.04 0.00 42.00 4.16
3279 4947 5.528043 AGTGCACAAAATATTGAACACCA 57.472 34.783 21.04 0.00 42.00 4.17
3280 4948 5.911752 AGTGCACAAAATATTGAACACCAA 58.088 33.333 21.04 0.00 42.00 3.67
3281 4949 6.523840 AGTGCACAAAATATTGAACACCAAT 58.476 32.000 21.04 0.00 46.52 3.16
3282 4950 6.991531 AGTGCACAAAATATTGAACACCAATT 59.008 30.769 21.04 0.00 42.55 2.32
3283 4951 7.498570 AGTGCACAAAATATTGAACACCAATTT 59.501 29.630 21.04 0.00 42.55 1.82
3284 4952 8.127954 GTGCACAAAATATTGAACACCAATTTT 58.872 29.630 13.17 0.00 42.55 1.82
3285 4953 8.127327 TGCACAAAATATTGAACACCAATTTTG 58.873 29.630 14.13 14.13 42.55 2.44
3315 4983 3.863407 GAGGGCTCCTCGAATGTTT 57.137 52.632 5.60 0.00 41.08 2.83
3316 4984 2.115343 GAGGGCTCCTCGAATGTTTT 57.885 50.000 5.60 0.00 41.08 2.43
3317 4985 2.010497 GAGGGCTCCTCGAATGTTTTC 58.990 52.381 5.60 0.00 41.08 2.29
3318 4986 1.630878 AGGGCTCCTCGAATGTTTTCT 59.369 47.619 0.00 0.00 0.00 2.52
3319 4987 1.740025 GGGCTCCTCGAATGTTTTCTG 59.260 52.381 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 60 1.442526 CCATTCCCATGTCAGCTCGC 61.443 60.000 0.00 0.00 0.00 5.03
64 66 0.611618 GGCACACCATTCCCATGTCA 60.612 55.000 0.00 0.00 35.26 3.58
65 67 1.656818 CGGCACACCATTCCCATGTC 61.657 60.000 0.00 0.00 34.57 3.06
68 70 0.329931 TAACGGCACACCATTCCCAT 59.670 50.000 0.00 0.00 34.57 4.00
69 71 0.110678 TTAACGGCACACCATTCCCA 59.889 50.000 0.00 0.00 34.57 4.37
118 120 1.635663 GAACGTGCCATTCCGACCAG 61.636 60.000 0.00 0.00 0.00 4.00
119 121 1.669760 GAACGTGCCATTCCGACCA 60.670 57.895 0.00 0.00 0.00 4.02
125 127 1.766069 AAAAAGCGAACGTGCCATTC 58.234 45.000 0.00 0.00 34.65 2.67
127 129 1.877443 ACTAAAAAGCGAACGTGCCAT 59.123 42.857 0.00 0.00 34.65 4.40
132 134 3.460103 TCCTTCACTAAAAAGCGAACGT 58.540 40.909 0.00 0.00 0.00 3.99
134 136 3.664537 CGCTCCTTCACTAAAAAGCGAAC 60.665 47.826 8.74 0.00 45.28 3.95
141 143 2.774687 GGAACCGCTCCTTCACTAAAA 58.225 47.619 0.00 0.00 41.61 1.52
142 144 2.467566 GGAACCGCTCCTTCACTAAA 57.532 50.000 0.00 0.00 41.61 1.85
156 158 1.968540 AGCAGCGCTTGAAGGAACC 60.969 57.895 7.50 0.00 33.89 3.62
191 193 1.068333 CATAAACTTTGCAGCCGCTGT 60.068 47.619 21.29 2.56 39.64 4.40
192 194 1.621107 CATAAACTTTGCAGCCGCTG 58.379 50.000 16.47 16.47 39.64 5.18
193 195 0.527565 CCATAAACTTTGCAGCCGCT 59.472 50.000 0.00 0.00 39.64 5.52
194 196 0.458370 CCCATAAACTTTGCAGCCGC 60.458 55.000 0.00 0.00 39.24 6.53
195 197 1.173043 TCCCATAAACTTTGCAGCCG 58.827 50.000 0.00 0.00 0.00 5.52
196 198 3.676291 TTTCCCATAAACTTTGCAGCC 57.324 42.857 0.00 0.00 0.00 4.85
197 199 4.376146 TGTTTTCCCATAAACTTTGCAGC 58.624 39.130 0.00 0.00 38.52 5.25
198 200 7.872483 ACTTATGTTTTCCCATAAACTTTGCAG 59.128 33.333 0.00 0.00 36.98 4.41
199 201 7.731054 ACTTATGTTTTCCCATAAACTTTGCA 58.269 30.769 0.00 0.00 36.98 4.08
200 202 9.135843 GTACTTATGTTTTCCCATAAACTTTGC 57.864 33.333 0.00 0.00 36.98 3.68
220 222 5.694231 TTTAGCACACGTCTCAGTACTTA 57.306 39.130 0.00 0.00 0.00 2.24
226 228 4.318831 GGTTCTTTTTAGCACACGTCTCAG 60.319 45.833 0.00 0.00 0.00 3.35
266 268 8.728833 AGAGATGAAGTTCAATGCTCTAAAAAG 58.271 33.333 23.65 0.00 34.20 2.27
267 269 8.627208 AGAGATGAAGTTCAATGCTCTAAAAA 57.373 30.769 23.65 0.00 34.20 1.94
270 272 8.627208 AAAAGAGATGAAGTTCAATGCTCTAA 57.373 30.769 24.50 0.00 34.58 2.10
271 273 8.099537 AGAAAAGAGATGAAGTTCAATGCTCTA 58.900 33.333 24.50 0.00 34.58 2.43
272 274 6.941436 AGAAAAGAGATGAAGTTCAATGCTCT 59.059 34.615 21.25 21.25 36.04 4.09
273 275 7.143514 AGAAAAGAGATGAAGTTCAATGCTC 57.856 36.000 10.14 15.62 0.00 4.26
274 276 7.521871 AAGAAAAGAGATGAAGTTCAATGCT 57.478 32.000 10.14 7.74 0.00 3.79
275 277 9.122613 GTAAAGAAAAGAGATGAAGTTCAATGC 57.877 33.333 10.14 2.79 0.00 3.56
284 286 9.220767 GCTTCCTTAGTAAAGAAAAGAGATGAA 57.779 33.333 0.00 0.00 34.37 2.57
285 287 8.375506 TGCTTCCTTAGTAAAGAAAAGAGATGA 58.624 33.333 0.00 0.00 34.37 2.92
286 288 8.553459 TGCTTCCTTAGTAAAGAAAAGAGATG 57.447 34.615 0.00 0.00 34.37 2.90
344 349 5.301551 TGCATGTTCCTGTTAGTGTTTGATT 59.698 36.000 0.00 0.00 0.00 2.57
358 363 7.856145 TTGTTTTTATTTTGTGCATGTTCCT 57.144 28.000 0.00 0.00 0.00 3.36
365 370 9.950680 TTTGAAAGTTTGTTTTTATTTTGTGCA 57.049 22.222 0.00 0.00 0.00 4.57
490 503 2.024306 GCCCCAGGCCTCTGTTTAATC 61.024 57.143 0.00 0.00 44.06 1.75
562 579 7.213216 TGTGTAAAGCATGTGTATTTGTGAT 57.787 32.000 0.00 0.00 0.00 3.06
564 581 7.872163 AATGTGTAAAGCATGTGTATTTGTG 57.128 32.000 0.00 0.00 0.00 3.33
570 587 9.884636 ATCTACTTAATGTGTAAAGCATGTGTA 57.115 29.630 0.00 0.00 0.00 2.90
571 588 8.792830 ATCTACTTAATGTGTAAAGCATGTGT 57.207 30.769 0.00 0.00 0.00 3.72
621 638 4.907879 ACTCAGCAGACCTTTCTTTTTG 57.092 40.909 0.00 0.00 0.00 2.44
639 656 3.308626 AGGGAACTGAGGCCTACTC 57.691 57.895 4.42 0.00 46.78 2.59
687 719 9.846248 AAAAATCTATAACTGATGCTGTCAAAC 57.154 29.630 0.00 0.00 36.14 2.93
737 787 9.831737 CACTTGGATAAACAGTAAATTCAGAAG 57.168 33.333 0.00 0.00 0.00 2.85
771 821 3.720601 TGGCTGCTGCTACCTGGG 61.721 66.667 15.64 0.00 39.59 4.45
777 827 1.003355 GAAGGTGTGGCTGCTGCTA 60.003 57.895 15.64 6.53 39.59 3.49
786 836 8.047310 ACAAGTATTTATAAGAGGAAGGTGTGG 58.953 37.037 0.00 0.00 0.00 4.17
808 858 5.947228 TGATTGCAGGAGAAAAGTACAAG 57.053 39.130 0.00 0.00 0.00 3.16
818 868 7.776500 TGATCTGATTTAATTGATTGCAGGAGA 59.224 33.333 0.00 0.00 0.00 3.71
843 893 6.197096 GTCGCACCTATGATTTTATTGCTTTG 59.803 38.462 0.00 0.00 0.00 2.77
844 894 6.095440 AGTCGCACCTATGATTTTATTGCTTT 59.905 34.615 0.00 0.00 0.00 3.51
845 895 5.590259 AGTCGCACCTATGATTTTATTGCTT 59.410 36.000 0.00 0.00 0.00 3.91
849 899 4.275936 GCCAGTCGCACCTATGATTTTATT 59.724 41.667 0.00 0.00 37.47 1.40
850 900 3.815401 GCCAGTCGCACCTATGATTTTAT 59.185 43.478 0.00 0.00 37.47 1.40
851 901 3.202906 GCCAGTCGCACCTATGATTTTA 58.797 45.455 0.00 0.00 37.47 1.52
852 902 2.017049 GCCAGTCGCACCTATGATTTT 58.983 47.619 0.00 0.00 37.47 1.82
853 903 1.668419 GCCAGTCGCACCTATGATTT 58.332 50.000 0.00 0.00 37.47 2.17
854 904 0.179045 GGCCAGTCGCACCTATGATT 60.179 55.000 0.00 0.00 40.31 2.57
855 905 1.447643 GGCCAGTCGCACCTATGAT 59.552 57.895 0.00 0.00 40.31 2.45
856 906 2.900273 GGCCAGTCGCACCTATGA 59.100 61.111 0.00 0.00 40.31 2.15
857 907 2.586079 CGGCCAGTCGCACCTATG 60.586 66.667 2.24 0.00 40.31 2.23
858 908 3.849951 CCGGCCAGTCGCACCTAT 61.850 66.667 2.24 0.00 40.31 2.57
859 909 3.942377 TACCGGCCAGTCGCACCTA 62.942 63.158 0.00 0.00 40.31 3.08
861 911 4.814294 CTACCGGCCAGTCGCACC 62.814 72.222 0.00 0.00 40.31 5.01
862 912 2.573609 AATCTACCGGCCAGTCGCAC 62.574 60.000 0.00 0.00 40.31 5.34
863 913 2.355986 AATCTACCGGCCAGTCGCA 61.356 57.895 0.00 0.00 40.31 5.10
864 914 1.883084 CAATCTACCGGCCAGTCGC 60.883 63.158 0.00 0.00 0.00 5.19
865 915 1.883084 GCAATCTACCGGCCAGTCG 60.883 63.158 0.00 0.00 0.00 4.18
866 916 0.750850 TAGCAATCTACCGGCCAGTC 59.249 55.000 0.00 0.00 0.00 3.51
867 917 1.424638 ATAGCAATCTACCGGCCAGT 58.575 50.000 0.00 0.00 0.00 4.00
868 918 2.671351 CGTATAGCAATCTACCGGCCAG 60.671 54.545 0.00 0.00 0.00 4.85
869 919 1.271379 CGTATAGCAATCTACCGGCCA 59.729 52.381 0.00 0.00 0.00 5.36
870 920 1.271656 ACGTATAGCAATCTACCGGCC 59.728 52.381 0.00 0.00 30.92 6.13
871 921 2.030540 TCACGTATAGCAATCTACCGGC 60.031 50.000 0.00 0.00 30.92 6.13
872 922 3.909776 TCACGTATAGCAATCTACCGG 57.090 47.619 0.00 0.00 30.92 5.28
873 923 5.332355 GCTTTTCACGTATAGCAATCTACCG 60.332 44.000 0.00 0.00 33.88 4.02
874 924 5.522460 TGCTTTTCACGTATAGCAATCTACC 59.478 40.000 9.67 0.00 40.39 3.18
875 925 6.583912 TGCTTTTCACGTATAGCAATCTAC 57.416 37.500 9.67 0.00 40.39 2.59
876 926 7.494298 TGAATGCTTTTCACGTATAGCAATCTA 59.506 33.333 19.84 10.35 45.66 1.98
877 927 6.316140 TGAATGCTTTTCACGTATAGCAATCT 59.684 34.615 19.84 9.48 45.66 2.40
878 928 6.412072 GTGAATGCTTTTCACGTATAGCAATC 59.588 38.462 14.48 15.06 45.66 2.67
879 929 6.258160 GTGAATGCTTTTCACGTATAGCAAT 58.742 36.000 14.48 8.34 45.66 3.56
880 930 5.627172 GTGAATGCTTTTCACGTATAGCAA 58.373 37.500 14.48 0.19 45.66 3.91
881 931 5.216566 GTGAATGCTTTTCACGTATAGCA 57.783 39.130 14.48 13.18 46.47 3.49
883 933 9.215771 AAGCTGGTGAATGCTTTTCACGTATAG 62.216 40.741 19.82 16.48 45.91 1.31
884 934 7.516027 AAGCTGGTGAATGCTTTTCACGTATA 61.516 38.462 19.82 10.16 45.91 1.47
885 935 6.777398 AAGCTGGTGAATGCTTTTCACGTAT 61.777 40.000 19.82 8.76 45.91 3.06
886 936 5.518036 AAGCTGGTGAATGCTTTTCACGTA 61.518 41.667 19.82 13.51 45.91 3.57
887 937 4.800500 AAGCTGGTGAATGCTTTTCACGT 61.800 43.478 19.82 7.86 45.91 4.49
888 938 2.287788 AAGCTGGTGAATGCTTTTCACG 60.288 45.455 19.82 12.21 45.91 4.35
889 939 3.054878 CAAGCTGGTGAATGCTTTTCAC 58.945 45.455 18.93 18.93 45.91 3.18
890 940 2.036217 CCAAGCTGGTGAATGCTTTTCA 59.964 45.455 0.00 0.00 45.91 2.69
891 941 2.680577 CCAAGCTGGTGAATGCTTTTC 58.319 47.619 0.00 0.00 45.91 2.29
892 942 2.825861 CCAAGCTGGTGAATGCTTTT 57.174 45.000 0.00 0.00 45.91 2.27
903 953 4.615912 GCAAACTATACACAACCAAGCTGG 60.616 45.833 0.00 0.00 45.02 4.85
904 954 4.475944 GCAAACTATACACAACCAAGCTG 58.524 43.478 0.00 0.00 0.00 4.24
905 955 3.506067 GGCAAACTATACACAACCAAGCT 59.494 43.478 0.00 0.00 0.00 3.74
906 956 3.506067 AGGCAAACTATACACAACCAAGC 59.494 43.478 0.00 0.00 0.00 4.01
907 957 4.142902 CGAGGCAAACTATACACAACCAAG 60.143 45.833 0.00 0.00 0.00 3.61
908 958 3.749088 CGAGGCAAACTATACACAACCAA 59.251 43.478 0.00 0.00 0.00 3.67
909 959 3.331150 CGAGGCAAACTATACACAACCA 58.669 45.455 0.00 0.00 0.00 3.67
910 960 2.676342 CCGAGGCAAACTATACACAACC 59.324 50.000 0.00 0.00 0.00 3.77
911 961 3.370061 GTCCGAGGCAAACTATACACAAC 59.630 47.826 0.00 0.00 0.00 3.32
912 962 3.007074 TGTCCGAGGCAAACTATACACAA 59.993 43.478 0.00 0.00 0.00 3.33
913 963 2.563620 TGTCCGAGGCAAACTATACACA 59.436 45.455 0.00 0.00 0.00 3.72
914 964 3.187700 CTGTCCGAGGCAAACTATACAC 58.812 50.000 0.00 0.00 0.00 2.90
915 965 2.829720 ACTGTCCGAGGCAAACTATACA 59.170 45.455 0.00 0.00 0.00 2.29
916 966 3.521947 ACTGTCCGAGGCAAACTATAC 57.478 47.619 0.00 0.00 0.00 1.47
917 967 4.441079 GCTAACTGTCCGAGGCAAACTATA 60.441 45.833 0.00 0.00 0.00 1.31
918 968 3.679083 GCTAACTGTCCGAGGCAAACTAT 60.679 47.826 0.00 0.00 0.00 2.12
919 969 2.353406 GCTAACTGTCCGAGGCAAACTA 60.353 50.000 0.00 0.00 0.00 2.24
920 970 1.608283 GCTAACTGTCCGAGGCAAACT 60.608 52.381 0.00 0.00 0.00 2.66
921 971 0.796927 GCTAACTGTCCGAGGCAAAC 59.203 55.000 0.00 0.00 0.00 2.93
922 972 0.669318 CGCTAACTGTCCGAGGCAAA 60.669 55.000 0.00 0.00 0.00 3.68
923 973 1.080093 CGCTAACTGTCCGAGGCAA 60.080 57.895 0.00 0.00 0.00 4.52
924 974 0.961857 TACGCTAACTGTCCGAGGCA 60.962 55.000 3.14 0.00 0.00 4.75
925 975 0.525029 GTACGCTAACTGTCCGAGGC 60.525 60.000 3.14 0.00 0.00 4.70
926 976 0.247974 CGTACGCTAACTGTCCGAGG 60.248 60.000 0.52 0.00 0.00 4.63
927 977 0.247974 CCGTACGCTAACTGTCCGAG 60.248 60.000 10.49 0.00 0.00 4.63
928 978 1.796151 CCGTACGCTAACTGTCCGA 59.204 57.895 10.49 0.00 0.00 4.55
929 979 1.870901 GCCGTACGCTAACTGTCCG 60.871 63.158 10.49 0.00 0.00 4.79
930 980 1.517913 GGCCGTACGCTAACTGTCC 60.518 63.158 10.49 0.00 37.74 4.02
931 981 1.870901 CGGCCGTACGCTAACTGTC 60.871 63.158 19.50 0.00 37.74 3.51
932 982 1.305219 TACGGCCGTACGCTAACTGT 61.305 55.000 33.45 7.88 37.74 3.55
933 983 0.179166 TTACGGCCGTACGCTAACTG 60.179 55.000 36.56 6.43 37.74 3.16
934 984 0.525761 TTTACGGCCGTACGCTAACT 59.474 50.000 36.56 11.16 37.74 2.24
935 985 0.916581 CTTTACGGCCGTACGCTAAC 59.083 55.000 36.56 0.00 37.74 2.34
936 986 0.525761 ACTTTACGGCCGTACGCTAA 59.474 50.000 36.56 25.62 37.74 3.09
937 987 1.063469 GTACTTTACGGCCGTACGCTA 59.937 52.381 36.56 20.24 37.74 4.26
938 988 0.179163 GTACTTTACGGCCGTACGCT 60.179 55.000 36.56 22.40 37.74 5.07
940 990 1.259316 GTGTACTTTACGGCCGTACG 58.741 55.000 36.56 29.61 37.04 3.67
944 994 1.343506 GTCTGTGTACTTTACGGCCG 58.656 55.000 26.86 26.86 0.00 6.13
950 1000 3.402110 TCGGACTCGTCTGTGTACTTTA 58.598 45.455 5.84 0.00 37.27 1.85
951 1001 2.224606 TCGGACTCGTCTGTGTACTTT 58.775 47.619 5.84 0.00 37.27 2.66
957 1007 0.803117 TAGCTTCGGACTCGTCTGTG 59.197 55.000 0.00 2.56 37.27 3.66
958 1008 0.803740 GTAGCTTCGGACTCGTCTGT 59.196 55.000 0.00 0.00 37.27 3.41
960 1010 2.088180 CGTAGCTTCGGACTCGTCT 58.912 57.895 4.63 0.00 37.69 4.18
980 1035 3.741476 CCGCCTTGGCTGCTGTTC 61.741 66.667 10.12 0.00 0.00 3.18
986 1041 1.523258 CTCATCTCCGCCTTGGCTG 60.523 63.158 10.12 3.29 37.80 4.85
1008 1063 5.682659 CTGATCAACTTCTCCATCTCCATT 58.317 41.667 0.00 0.00 0.00 3.16
1035 1096 1.073897 GCCAAGCACCACCTTCTCT 59.926 57.895 0.00 0.00 0.00 3.10
1158 1228 3.687321 GATGCTGAGCGGCTTCCCA 62.687 63.158 2.97 1.76 32.49 4.37
1230 1300 6.429078 TGATCACAGAATGAAGAAGGAACTTG 59.571 38.462 0.00 0.00 46.15 3.16
1242 1313 1.550072 TCGCACCTGATCACAGAATGA 59.450 47.619 0.00 0.00 46.03 2.57
1243 1314 2.014335 TCGCACCTGATCACAGAATG 57.986 50.000 0.00 0.00 46.03 2.67
1244 1315 2.996249 ATCGCACCTGATCACAGAAT 57.004 45.000 0.00 0.00 46.03 2.40
1247 1318 2.625737 AGAAATCGCACCTGATCACAG 58.374 47.619 0.00 0.00 43.12 3.66
1256 1352 5.041951 TGTTCATGTAAAGAAATCGCACC 57.958 39.130 0.00 0.00 0.00 5.01
1285 1508 5.515626 GTGGACGATGACACTGTAAGATTAC 59.484 44.000 0.00 0.00 37.43 1.89
1292 1519 1.544246 CTGGTGGACGATGACACTGTA 59.456 52.381 0.00 0.00 37.72 2.74
1299 1526 4.426416 CGTAATTTACTGGTGGACGATGA 58.574 43.478 5.11 0.00 0.00 2.92
1311 1555 2.158943 GCTCCCCTCAGCGTAATTTACT 60.159 50.000 5.11 0.00 0.00 2.24
1313 1557 1.834896 TGCTCCCCTCAGCGTAATTTA 59.165 47.619 0.00 0.00 42.92 1.40
1323 1567 3.636231 CCAACCGTGCTCCCCTCA 61.636 66.667 0.00 0.00 0.00 3.86
1347 1591 4.103311 AGGCAGAAGAAGTACCACTCTTTT 59.897 41.667 4.49 0.00 0.00 2.27
1485 1744 3.912907 AATACGCCCGAGCCCGAG 61.913 66.667 0.00 0.00 38.22 4.63
1486 1745 4.215742 CAATACGCCCGAGCCCGA 62.216 66.667 0.00 0.00 38.22 5.14
1487 1746 2.989055 AATCAATACGCCCGAGCCCG 62.989 60.000 0.00 0.00 34.57 6.13
1488 1747 1.227853 AATCAATACGCCCGAGCCC 60.228 57.895 0.00 0.00 34.57 5.19
1489 1748 1.507141 CCAATCAATACGCCCGAGCC 61.507 60.000 0.00 0.00 34.57 4.70
1490 1749 1.507141 CCCAATCAATACGCCCGAGC 61.507 60.000 0.00 0.00 0.00 5.03
1491 1750 1.507141 GCCCAATCAATACGCCCGAG 61.507 60.000 0.00 0.00 0.00 4.63
1492 1751 1.525077 GCCCAATCAATACGCCCGA 60.525 57.895 0.00 0.00 0.00 5.14
1493 1752 1.525995 AGCCCAATCAATACGCCCG 60.526 57.895 0.00 0.00 0.00 6.13
1494 1753 0.465460 TCAGCCCAATCAATACGCCC 60.465 55.000 0.00 0.00 0.00 6.13
1500 1759 5.516984 AGAGATTTCTTCAGCCCAATCAAT 58.483 37.500 0.00 0.00 0.00 2.57
1502 1761 4.521146 GAGAGATTTCTTCAGCCCAATCA 58.479 43.478 0.00 0.00 32.53 2.57
1506 1765 1.902508 ACGAGAGATTTCTTCAGCCCA 59.097 47.619 0.00 0.00 32.53 5.36
1518 1777 3.215975 GCCAAGGTAGTAGACGAGAGAT 58.784 50.000 0.00 0.00 0.00 2.75
1521 1780 2.502142 TGCCAAGGTAGTAGACGAGA 57.498 50.000 0.00 0.00 0.00 4.04
1535 1794 3.321497 GTGCATTTACCGAATTTGCCAA 58.679 40.909 0.00 0.00 0.00 4.52
1541 1800 3.192633 GGTCTTGGTGCATTTACCGAATT 59.807 43.478 0.00 0.00 43.87 2.17
1542 1801 2.752903 GGTCTTGGTGCATTTACCGAAT 59.247 45.455 0.00 0.00 43.87 3.34
1543 1802 2.156098 GGTCTTGGTGCATTTACCGAA 58.844 47.619 0.00 0.00 43.87 4.30
1544 1803 1.816074 GGTCTTGGTGCATTTACCGA 58.184 50.000 0.00 0.00 43.87 4.69
1548 1807 2.422597 CAGTCGGTCTTGGTGCATTTA 58.577 47.619 0.00 0.00 0.00 1.40
1551 1810 1.003355 CCAGTCGGTCTTGGTGCAT 60.003 57.895 0.00 0.00 0.00 3.96
1552 1811 1.480212 ATCCAGTCGGTCTTGGTGCA 61.480 55.000 0.00 0.00 0.00 4.57
1644 1912 4.961511 TGCACGCGTGGACCACTC 62.962 66.667 37.47 20.74 31.34 3.51
1676 1948 2.281414 CACGCACCACATGGACCA 60.281 61.111 4.53 0.00 38.94 4.02
1681 1953 1.065401 AGTTCAAACACGCACCACATG 59.935 47.619 0.00 0.00 0.00 3.21
1682 1954 1.388547 AGTTCAAACACGCACCACAT 58.611 45.000 0.00 0.00 0.00 3.21
1683 1955 1.131504 GAAGTTCAAACACGCACCACA 59.868 47.619 0.00 0.00 0.00 4.17
1684 1956 1.822581 GAAGTTCAAACACGCACCAC 58.177 50.000 0.00 0.00 0.00 4.16
1685 1957 0.375454 CGAAGTTCAAACACGCACCA 59.625 50.000 3.32 0.00 0.00 4.17
1686 1958 3.142796 CGAAGTTCAAACACGCACC 57.857 52.632 3.32 0.00 0.00 5.01
1690 1962 0.591170 ATGGGCGAAGTTCAAACACG 59.409 50.000 3.32 7.68 35.37 4.49
1691 1963 2.161609 CCTATGGGCGAAGTTCAAACAC 59.838 50.000 3.32 0.00 0.00 3.32
1692 1964 2.039216 TCCTATGGGCGAAGTTCAAACA 59.961 45.455 3.32 0.00 0.00 2.83
1693 1965 2.706890 TCCTATGGGCGAAGTTCAAAC 58.293 47.619 3.32 0.00 0.00 2.93
1694 1966 3.541632 GATCCTATGGGCGAAGTTCAAA 58.458 45.455 3.32 0.00 0.00 2.69
1695 1967 2.483013 CGATCCTATGGGCGAAGTTCAA 60.483 50.000 3.32 0.00 0.00 2.69
1696 1968 1.068588 CGATCCTATGGGCGAAGTTCA 59.931 52.381 3.32 0.00 0.00 3.18
1697 1969 1.340248 TCGATCCTATGGGCGAAGTTC 59.660 52.381 0.00 0.00 30.17 3.01
1698 1970 1.068741 GTCGATCCTATGGGCGAAGTT 59.931 52.381 0.00 0.00 33.52 2.66
1699 1971 0.674534 GTCGATCCTATGGGCGAAGT 59.325 55.000 0.00 0.00 33.52 3.01
1700 1972 0.038159 GGTCGATCCTATGGGCGAAG 60.038 60.000 0.00 0.00 33.52 3.79
1701 1973 0.757561 TGGTCGATCCTATGGGCGAA 60.758 55.000 0.00 0.00 33.52 4.70
1702 1974 1.152631 TGGTCGATCCTATGGGCGA 60.153 57.895 0.00 0.00 37.07 5.54
1703 1975 1.006102 GTGGTCGATCCTATGGGCG 60.006 63.158 0.00 0.00 37.07 6.13
1704 1976 0.687354 ATGTGGTCGATCCTATGGGC 59.313 55.000 0.00 0.00 37.07 5.36
1705 1977 1.970640 TGATGTGGTCGATCCTATGGG 59.029 52.381 0.00 0.00 37.07 4.00
1706 1978 3.751479 TTGATGTGGTCGATCCTATGG 57.249 47.619 0.00 0.00 37.07 2.74
1707 1979 5.178252 GTGATTTGATGTGGTCGATCCTATG 59.822 44.000 0.00 0.00 37.07 2.23
1708 1980 5.300752 GTGATTTGATGTGGTCGATCCTAT 58.699 41.667 0.00 0.00 37.07 2.57
1709 1981 4.693283 GTGATTTGATGTGGTCGATCCTA 58.307 43.478 0.00 0.00 37.07 2.94
1710 1982 3.535561 GTGATTTGATGTGGTCGATCCT 58.464 45.455 0.00 0.00 37.07 3.24
1711 1983 2.285220 CGTGATTTGATGTGGTCGATCC 59.715 50.000 0.00 0.00 0.00 3.36
1712 1984 3.186909 TCGTGATTTGATGTGGTCGATC 58.813 45.455 0.00 0.00 0.00 3.69
1713 1985 3.245518 TCGTGATTTGATGTGGTCGAT 57.754 42.857 0.00 0.00 0.00 3.59
1714 1986 2.734276 TCGTGATTTGATGTGGTCGA 57.266 45.000 0.00 0.00 0.00 4.20
1715 1987 2.929398 TCATCGTGATTTGATGTGGTCG 59.071 45.455 3.21 0.00 42.96 4.79
1716 1988 4.154015 TGTTCATCGTGATTTGATGTGGTC 59.846 41.667 3.21 0.00 42.96 4.02
1717 1989 4.071423 TGTTCATCGTGATTTGATGTGGT 58.929 39.130 3.21 0.00 42.96 4.16
1723 1995 1.125930 CGCGTGTTCATCGTGATTTGA 59.874 47.619 0.00 0.00 40.55 2.69
1724 1996 1.136363 ACGCGTGTTCATCGTGATTTG 60.136 47.619 12.93 0.00 40.55 2.32
1733 2005 3.799137 AATTTTCGTACGCGTGTTCAT 57.201 38.095 24.59 3.24 39.49 2.57
1753 2027 1.673920 GACCGTGACCTTGCTCAAAAA 59.326 47.619 0.00 0.00 0.00 1.94
1756 2030 1.070786 GGACCGTGACCTTGCTCAA 59.929 57.895 0.00 0.00 0.00 3.02
1831 2121 1.962807 CCACACCTCCTGCATTTTCAA 59.037 47.619 0.00 0.00 0.00 2.69
1860 2150 0.335019 TGGTCCTCCTGAAGATCCGA 59.665 55.000 0.00 0.00 34.23 4.55
1861 2151 1.342819 GATGGTCCTCCTGAAGATCCG 59.657 57.143 0.00 0.00 34.23 4.18
1936 2253 2.046892 CCCCGTGTTGGAGCTCTG 60.047 66.667 14.64 0.00 42.00 3.35
1937 2254 2.203788 TCCCCGTGTTGGAGCTCT 60.204 61.111 14.64 0.00 42.00 4.09
1973 2290 0.108992 GTTCATGTACTCGTGGCCGA 60.109 55.000 0.00 0.00 41.73 5.54
1978 2295 3.179830 GCAGGTAGTTCATGTACTCGTG 58.820 50.000 8.41 12.30 0.00 4.35
2047 2382 0.817654 TCCATCTGGCTGACGTACTG 59.182 55.000 0.00 0.00 34.44 2.74
2048 2383 0.818296 GTCCATCTGGCTGACGTACT 59.182 55.000 0.00 0.00 34.44 2.73
2049 2384 0.525668 CGTCCATCTGGCTGACGTAC 60.526 60.000 0.00 0.00 44.96 3.67
2058 2393 2.002586 CTGTTTACTGCGTCCATCTGG 58.997 52.381 0.00 0.00 0.00 3.86
2066 2401 2.014128 AGTTGTTGCTGTTTACTGCGT 58.986 42.857 7.16 0.00 42.71 5.24
2068 2403 4.292977 AGAAGTTGTTGCTGTTTACTGC 57.707 40.909 4.97 4.97 40.61 4.40
2070 2405 6.018994 CGTAGAAGAAGTTGTTGCTGTTTACT 60.019 38.462 0.00 0.00 0.00 2.24
2073 2408 4.873827 TCGTAGAAGAAGTTGTTGCTGTTT 59.126 37.500 0.00 0.00 0.00 2.83
2081 2416 3.005578 GGTGTCCTCGTAGAAGAAGTTGT 59.994 47.826 0.00 0.00 34.09 3.32
2160 2504 3.196685 GTGTATTCTGTGGCTTCTCCTCT 59.803 47.826 0.00 0.00 35.26 3.69
2164 2508 2.271800 CGGTGTATTCTGTGGCTTCTC 58.728 52.381 0.00 0.00 0.00 2.87
2169 2513 0.108992 TCGACGGTGTATTCTGTGGC 60.109 55.000 0.00 0.00 0.00 5.01
2210 2554 2.586079 CGGCGTGGCTATGGTCAG 60.586 66.667 0.00 0.00 0.00 3.51
2232 2576 4.083110 TCGACCTCGTAAAAATCGTTCTCT 60.083 41.667 0.00 0.00 40.80 3.10
2234 2578 4.164294 CTCGACCTCGTAAAAATCGTTCT 58.836 43.478 0.00 0.00 40.80 3.01
2248 2592 1.413077 CTCCAAATACCCCTCGACCTC 59.587 57.143 0.00 0.00 0.00 3.85
2299 2652 0.601841 CAGTCGTAAAACCCTGCCGT 60.602 55.000 0.00 0.00 0.00 5.68
2328 2681 3.376935 CTACACCCGGGAGCAGCAG 62.377 68.421 32.02 11.21 0.00 4.24
2329 2682 3.390521 CTACACCCGGGAGCAGCA 61.391 66.667 32.02 4.61 0.00 4.41
2330 2683 4.162690 CCTACACCCGGGAGCAGC 62.163 72.222 32.02 0.00 0.00 5.25
2331 2684 2.683933 ACCTACACCCGGGAGCAG 60.684 66.667 32.02 20.37 0.00 4.24
2332 2685 3.000819 CACCTACACCCGGGAGCA 61.001 66.667 32.02 9.68 0.00 4.26
2333 2686 4.468689 GCACCTACACCCGGGAGC 62.469 72.222 32.02 14.77 32.74 4.70
2334 2687 3.000819 TGCACCTACACCCGGGAG 61.001 66.667 32.02 24.28 0.00 4.30
2335 2688 3.315949 GTGCACCTACACCCGGGA 61.316 66.667 32.02 3.04 34.35 5.14
2346 2699 0.825840 TTTGCCCTACAAGGTGCACC 60.826 55.000 29.22 29.22 39.91 5.01
2347 2700 1.256812 ATTTGCCCTACAAGGTGCAC 58.743 50.000 8.80 8.80 39.91 4.57
2348 2701 2.889170 TATTTGCCCTACAAGGTGCA 57.111 45.000 5.37 5.37 40.06 4.57
2349 2702 3.128764 GTCTTATTTGCCCTACAAGGTGC 59.871 47.826 0.00 0.00 40.06 5.01
2350 2703 3.694566 GGTCTTATTTGCCCTACAAGGTG 59.305 47.826 0.00 0.00 40.06 4.00
2351 2704 3.308904 GGGTCTTATTTGCCCTACAAGGT 60.309 47.826 0.00 0.00 40.06 3.50
2352 2705 3.288092 GGGTCTTATTTGCCCTACAAGG 58.712 50.000 0.00 0.00 40.06 3.61
2353 2706 2.943033 CGGGTCTTATTTGCCCTACAAG 59.057 50.000 0.00 0.00 40.06 3.16
2372 2725 1.376812 GTGCCCAAACCCTAGACGG 60.377 63.158 0.00 0.00 0.00 4.79
2375 2728 3.074281 CGGTGCCCAAACCCTAGA 58.926 61.111 0.00 0.00 36.84 2.43
2540 2893 1.369403 GTCCACTCCCCCTAAACCTT 58.631 55.000 0.00 0.00 0.00 3.50
2582 2935 4.840288 CCGTACACGATCGCCGCA 62.840 66.667 16.60 0.00 43.32 5.69
2646 2999 2.972505 CGAACGTGCCCACTTGCT 60.973 61.111 0.00 0.00 0.00 3.91
2682 3035 2.171079 TTTTATGCCCGCGAGCTCG 61.171 57.895 31.37 31.37 43.27 5.03
2712 3065 0.824109 TCCTCAGCGATTACACAGGG 59.176 55.000 0.00 0.00 0.00 4.45
2752 3105 5.347635 CACGAACGGATTTCTCTGTATTTCA 59.652 40.000 0.00 0.00 40.20 2.69
3045 3399 0.759436 ACCGGAGACACACTTGGAGT 60.759 55.000 9.46 0.00 0.00 3.85
3049 3403 1.000843 TGATCACCGGAGACACACTTG 59.999 52.381 9.46 0.00 0.00 3.16
3050 3404 1.000955 GTGATCACCGGAGACACACTT 59.999 52.381 23.27 2.67 35.65 3.16
3052 3406 0.389948 GGTGATCACCGGAGACACAC 60.390 60.000 28.52 23.57 42.29 3.82
3053 3407 1.972198 GGTGATCACCGGAGACACA 59.028 57.895 28.52 16.79 42.29 3.72
3091 3445 1.302511 ATCCAGGTGTGTCGTTGCC 60.303 57.895 0.00 0.00 0.00 4.52
3094 4746 1.872237 CGTTCATCCAGGTGTGTCGTT 60.872 52.381 0.00 0.00 0.00 3.85
3097 4749 0.034896 ACCGTTCATCCAGGTGTGTC 59.965 55.000 0.00 0.00 36.81 3.67
3098 4750 2.142220 ACCGTTCATCCAGGTGTGT 58.858 52.632 0.00 0.00 36.81 3.72
3102 4754 2.039746 TGAATTCACCGTTCATCCAGGT 59.960 45.455 3.38 0.00 39.12 4.00
3160 4828 9.883142 ATTTTAGGTCTTGTTTGATGTCAAAAA 57.117 25.926 9.55 2.14 46.08 1.94
3161 4829 9.883142 AATTTTAGGTCTTGTTTGATGTCAAAA 57.117 25.926 9.55 0.00 46.08 2.44
3162 4830 9.883142 AAATTTTAGGTCTTGTTTGATGTCAAA 57.117 25.926 4.16 4.16 42.90 2.69
3163 4831 9.883142 AAAATTTTAGGTCTTGTTTGATGTCAA 57.117 25.926 0.37 0.00 0.00 3.18
3166 4834 9.476202 GCTAAAATTTTAGGTCTTGTTTGATGT 57.524 29.630 30.00 0.00 40.31 3.06
3167 4835 9.696917 AGCTAAAATTTTAGGTCTTGTTTGATG 57.303 29.630 28.53 7.88 45.37 3.07
3179 4847 8.593492 AGTTTGCAAGAAGCTAAAATTTTAGG 57.407 30.769 30.00 17.81 45.94 2.69
3182 4850 9.558648 CAAAAGTTTGCAAGAAGCTAAAATTTT 57.441 25.926 8.75 8.75 43.48 1.82
3183 4851 8.729756 ACAAAAGTTTGCAAGAAGCTAAAATTT 58.270 25.926 0.00 0.00 45.94 1.82
3184 4852 8.177013 CACAAAAGTTTGCAAGAAGCTAAAATT 58.823 29.630 0.00 0.00 45.94 1.82
3185 4853 7.548780 TCACAAAAGTTTGCAAGAAGCTAAAAT 59.451 29.630 0.00 0.00 45.94 1.82
3186 4854 6.870965 TCACAAAAGTTTGCAAGAAGCTAAAA 59.129 30.769 0.00 0.00 45.94 1.52
3187 4855 6.393990 TCACAAAAGTTTGCAAGAAGCTAAA 58.606 32.000 0.00 0.00 45.94 1.85
3188 4856 5.960113 TCACAAAAGTTTGCAAGAAGCTAA 58.040 33.333 0.00 0.00 45.94 3.09
3189 4857 5.574891 TCACAAAAGTTTGCAAGAAGCTA 57.425 34.783 0.00 0.00 45.94 3.32
3190 4858 4.427312 CTCACAAAAGTTTGCAAGAAGCT 58.573 39.130 0.00 0.00 45.94 3.74
3191 4859 3.000623 GCTCACAAAAGTTTGCAAGAAGC 59.999 43.478 0.00 0.00 41.79 3.86
3192 4860 4.175516 TGCTCACAAAAGTTTGCAAGAAG 58.824 39.130 0.00 0.00 41.79 2.85
3193 4861 4.185467 TGCTCACAAAAGTTTGCAAGAA 57.815 36.364 0.00 0.00 41.79 2.52
3194 4862 3.865011 TGCTCACAAAAGTTTGCAAGA 57.135 38.095 0.00 0.05 41.79 3.02
3195 4863 4.925061 TTTGCTCACAAAAGTTTGCAAG 57.075 36.364 0.00 3.29 42.73 4.01
3206 4874 7.065803 GGCTACTAGAATGTTATTTGCTCACAA 59.934 37.037 0.00 0.00 0.00 3.33
3207 4875 6.538742 GGCTACTAGAATGTTATTTGCTCACA 59.461 38.462 0.00 0.00 0.00 3.58
3208 4876 6.763610 AGGCTACTAGAATGTTATTTGCTCAC 59.236 38.462 0.00 0.00 0.00 3.51
3209 4877 6.889198 AGGCTACTAGAATGTTATTTGCTCA 58.111 36.000 0.00 0.00 0.00 4.26
3210 4878 7.495934 TGAAGGCTACTAGAATGTTATTTGCTC 59.504 37.037 0.00 0.00 0.00 4.26
3211 4879 7.281100 GTGAAGGCTACTAGAATGTTATTTGCT 59.719 37.037 0.00 0.00 0.00 3.91
3212 4880 7.065803 TGTGAAGGCTACTAGAATGTTATTTGC 59.934 37.037 0.00 0.00 0.00 3.68
3213 4881 8.492673 TGTGAAGGCTACTAGAATGTTATTTG 57.507 34.615 0.00 0.00 0.00 2.32
3214 4882 9.515226 TTTGTGAAGGCTACTAGAATGTTATTT 57.485 29.630 0.00 0.00 0.00 1.40
3215 4883 9.515226 TTTTGTGAAGGCTACTAGAATGTTATT 57.485 29.630 0.00 0.00 0.00 1.40
3216 4884 9.515226 TTTTTGTGAAGGCTACTAGAATGTTAT 57.485 29.630 0.00 0.00 0.00 1.89
3217 4885 8.911918 TTTTTGTGAAGGCTACTAGAATGTTA 57.088 30.769 0.00 0.00 0.00 2.41
3218 4886 7.817418 TTTTTGTGAAGGCTACTAGAATGTT 57.183 32.000 0.00 0.00 0.00 2.71
3239 4907 7.319646 TGTGCACTTTTGAGTAGATTGTTTTT 58.680 30.769 19.41 0.00 0.00 1.94
3240 4908 6.862209 TGTGCACTTTTGAGTAGATTGTTTT 58.138 32.000 19.41 0.00 0.00 2.43
3241 4909 6.449635 TGTGCACTTTTGAGTAGATTGTTT 57.550 33.333 19.41 0.00 0.00 2.83
3242 4910 6.449635 TTGTGCACTTTTGAGTAGATTGTT 57.550 33.333 19.41 0.00 0.00 2.83
3243 4911 6.449635 TTTGTGCACTTTTGAGTAGATTGT 57.550 33.333 19.41 0.00 0.00 2.71
3244 4912 7.935338 ATTTTGTGCACTTTTGAGTAGATTG 57.065 32.000 19.41 0.00 0.00 2.67
3246 4914 9.630098 CAATATTTTGTGCACTTTTGAGTAGAT 57.370 29.630 19.41 0.89 0.00 1.98
3247 4915 8.845227 TCAATATTTTGTGCACTTTTGAGTAGA 58.155 29.630 19.41 4.09 34.32 2.59
3248 4916 9.462174 TTCAATATTTTGTGCACTTTTGAGTAG 57.538 29.630 19.41 1.68 34.32 2.57
3249 4917 9.243637 GTTCAATATTTTGTGCACTTTTGAGTA 57.756 29.630 19.41 2.70 34.32 2.59
3250 4918 7.763528 TGTTCAATATTTTGTGCACTTTTGAGT 59.236 29.630 19.41 0.00 34.32 3.41
3251 4919 8.057742 GTGTTCAATATTTTGTGCACTTTTGAG 58.942 33.333 19.41 1.64 36.55 3.02
3252 4920 7.010923 GGTGTTCAATATTTTGTGCACTTTTGA 59.989 33.333 19.41 11.36 37.97 2.69
3253 4921 7.125113 GGTGTTCAATATTTTGTGCACTTTTG 58.875 34.615 19.41 9.23 37.97 2.44
3254 4922 6.820656 TGGTGTTCAATATTTTGTGCACTTTT 59.179 30.769 19.41 2.98 37.97 2.27
3255 4923 6.344500 TGGTGTTCAATATTTTGTGCACTTT 58.656 32.000 19.41 2.62 37.97 2.66
3256 4924 5.911752 TGGTGTTCAATATTTTGTGCACTT 58.088 33.333 19.41 0.00 37.97 3.16
3257 4925 5.528043 TGGTGTTCAATATTTTGTGCACT 57.472 34.783 19.41 0.00 37.97 4.40
3258 4926 6.783892 ATTGGTGTTCAATATTTTGTGCAC 57.216 33.333 10.75 10.75 43.71 4.57
3259 4927 7.798596 AAATTGGTGTTCAATATTTTGTGCA 57.201 28.000 0.00 0.00 44.68 4.57
3260 4928 8.127954 ACAAAATTGGTGTTCAATATTTTGTGC 58.872 29.630 18.11 0.00 46.14 4.57
3297 4965 2.010497 GAAAACATTCGAGGAGCCCTC 58.990 52.381 10.35 10.35 46.44 4.30
3298 4966 1.630878 AGAAAACATTCGAGGAGCCCT 59.369 47.619 0.00 0.00 36.03 5.19
3299 4967 1.740025 CAGAAAACATTCGAGGAGCCC 59.260 52.381 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.