Multiple sequence alignment - TraesCS4B01G382000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G382000 chr4B 100.000 6078 0 0 1 6078 661502944 661496867 0.000000e+00 11225.0
1 TraesCS4B01G382000 chr4B 92.864 1093 52 3 4993 6061 661678941 661680031 0.000000e+00 1563.0
2 TraesCS4B01G382000 chr4B 84.133 271 34 5 1828 2097 665875229 665874967 2.810000e-63 254.0
3 TraesCS4B01G382000 chr4B 85.714 112 15 1 555 666 589027432 589027542 3.850000e-22 117.0
4 TraesCS4B01G382000 chr4B 93.478 46 1 2 1286 1331 660717157 660717200 3.930000e-07 67.6
5 TraesCS4B01G382000 chr5A 94.796 2671 98 17 3225 5887 702134826 702137463 0.000000e+00 4124.0
6 TraesCS4B01G382000 chr5A 93.405 1592 84 11 1646 3225 702133210 702134792 0.000000e+00 2338.0
7 TraesCS4B01G382000 chr5A 87.599 758 53 20 906 1649 702132424 702133154 0.000000e+00 841.0
8 TraesCS4B01G382000 chr5A 85.571 499 49 11 2554 3045 101412553 101413035 9.090000e-138 501.0
9 TraesCS4B01G382000 chr5A 84.989 453 47 12 2451 2898 326298048 326298484 2.010000e-119 440.0
10 TraesCS4B01G382000 chr5A 82.857 455 57 13 2451 2901 104014317 104013880 7.390000e-104 388.0
11 TraesCS4B01G382000 chr5A 86.850 327 28 4 3289 3611 101413136 101413451 9.690000e-93 351.0
12 TraesCS4B01G382000 chr5A 97.838 185 4 0 5891 6075 702137502 702137686 2.730000e-83 320.0
13 TraesCS4B01G382000 chr5A 84.133 271 34 5 1828 2097 705842214 705841952 2.810000e-63 254.0
14 TraesCS4B01G382000 chr5A 88.235 136 13 3 4317 4452 101413512 101413644 6.310000e-35 159.0
15 TraesCS4B01G382000 chr4D 96.313 2007 53 7 3225 5223 505985954 505987947 0.000000e+00 3277.0
16 TraesCS4B01G382000 chr4D 95.477 1592 47 12 1651 3226 505984338 505985920 0.000000e+00 2518.0
17 TraesCS4B01G382000 chr4D 93.853 667 28 6 5226 5887 505988105 505988763 0.000000e+00 992.0
18 TraesCS4B01G382000 chr4D 88.227 688 35 15 756 1429 505983618 505984273 0.000000e+00 780.0
19 TraesCS4B01G382000 chr4D 96.216 185 7 0 5891 6075 505988802 505988986 2.750000e-78 303.0
20 TraesCS4B01G382000 chr4D 86.066 122 14 3 550 669 9186008 9185888 1.780000e-25 128.0
21 TraesCS4B01G382000 chr4D 82.143 112 20 0 555 666 320760286 320760175 5.010000e-16 97.1
22 TraesCS4B01G382000 chr2A 88.670 406 42 3 3270 3673 429766461 429766864 5.470000e-135 492.0
23 TraesCS4B01G382000 chr2A 79.596 544 55 26 2688 3222 429765863 429766359 7.550000e-89 339.0
24 TraesCS4B01G382000 chr2A 81.690 213 35 2 347 559 507077484 507077692 2.250000e-39 174.0
25 TraesCS4B01G382000 chr2A 92.174 115 9 0 445 559 154408124 154408010 4.870000e-36 163.0
26 TraesCS4B01G382000 chr3A 83.768 499 45 12 2554 3045 726838846 726839315 2.010000e-119 440.0
27 TraesCS4B01G382000 chr3A 88.685 327 33 1 3289 3611 726839416 726839742 4.410000e-106 396.0
28 TraesCS4B01G382000 chr3A 88.971 136 12 3 4317 4452 726839803 726839935 1.360000e-36 165.0
29 TraesCS4B01G382000 chr3A 75.532 188 39 5 552 733 114766082 114766268 1.090000e-12 86.1
30 TraesCS4B01G382000 chr4A 84.176 455 53 11 2451 2901 300978754 300978315 2.030000e-114 424.0
31 TraesCS4B01G382000 chr4A 84.176 455 53 10 2451 2901 300983625 300983186 2.030000e-114 424.0
32 TraesCS4B01G382000 chr4A 90.769 130 7 3 2921 3045 284690769 284690640 1.050000e-37 169.0
33 TraesCS4B01G382000 chr4A 90.351 114 11 0 446 559 100663468 100663355 3.790000e-32 150.0
34 TraesCS4B01G382000 chr4A 82.000 150 22 3 1836 1985 609565613 609565757 8.270000e-24 122.0
35 TraesCS4B01G382000 chr1A 84.777 381 39 11 2525 2901 348983843 348983478 1.240000e-96 364.0
36 TraesCS4B01G382000 chr7B 91.393 244 19 2 2428 2671 512987429 512987670 3.510000e-87 333.0
37 TraesCS4B01G382000 chr7B 89.401 217 21 2 2438 2654 419829042 419829256 7.760000e-69 272.0
38 TraesCS4B01G382000 chr7B 91.597 119 10 0 439 557 36603384 36603266 1.360000e-36 165.0
39 TraesCS4B01G382000 chr7B 83.761 117 19 0 550 666 706246998 706247114 1.790000e-20 111.0
40 TraesCS4B01G382000 chr1B 86.345 249 31 2 5592 5840 89696091 89696336 1.000000e-67 268.0
41 TraesCS4B01G382000 chr1B 86.364 110 14 1 557 666 161987144 161987036 1.070000e-22 119.0
42 TraesCS4B01G382000 chr5D 78.551 345 52 12 1670 2002 557510370 557510704 2.220000e-49 207.0
43 TraesCS4B01G382000 chr5D 79.051 253 30 14 1828 2079 557510757 557510987 1.060000e-32 152.0
44 TraesCS4B01G382000 chrUn 77.707 314 42 18 2300 2610 371224932 371225220 3.770000e-37 167.0
45 TraesCS4B01G382000 chrUn 87.023 131 17 0 2300 2430 336603669 336603539 1.360000e-31 148.0
46 TraesCS4B01G382000 chr7D 80.172 232 38 6 328 559 98984967 98984744 3.770000e-37 167.0
47 TraesCS4B01G382000 chr3D 77.389 314 43 18 2300 2610 599427418 599427706 1.750000e-35 161.0
48 TraesCS4B01G382000 chr2B 80.169 237 29 11 339 559 762453671 762453437 1.750000e-35 161.0
49 TraesCS4B01G382000 chr5B 84.416 154 19 2 1828 1981 711105077 711105225 4.910000e-31 147.0
50 TraesCS4B01G382000 chr7A 88.430 121 12 1 439 559 642874789 642874671 1.770000e-30 145.0
51 TraesCS4B01G382000 chr7A 84.466 103 16 0 564 666 4596871 4596769 1.080000e-17 102.0
52 TraesCS4B01G382000 chr2D 88.430 121 13 1 439 559 166603285 166603404 1.770000e-30 145.0
53 TraesCS4B01G382000 chr1D 85.088 114 17 0 550 663 32759119 32759006 3.850000e-22 117.0
54 TraesCS4B01G382000 chr1D 87.379 103 12 1 564 666 104576627 104576728 3.850000e-22 117.0
55 TraesCS4B01G382000 chr3B 75.758 231 49 5 330 559 523279089 523278865 6.440000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G382000 chr4B 661496867 661502944 6077 True 11225.000000 11225 100.000000 1 6078 1 chr4B.!!$R1 6077
1 TraesCS4B01G382000 chr4B 661678941 661680031 1090 False 1563.000000 1563 92.864000 4993 6061 1 chr4B.!!$F3 1068
2 TraesCS4B01G382000 chr5A 702132424 702137686 5262 False 1905.750000 4124 93.409500 906 6075 4 chr5A.!!$F3 5169
3 TraesCS4B01G382000 chr5A 101412553 101413644 1091 False 337.000000 501 86.885333 2554 4452 3 chr5A.!!$F2 1898
4 TraesCS4B01G382000 chr4D 505983618 505988986 5368 False 1574.000000 3277 94.017200 756 6075 5 chr4D.!!$F1 5319
5 TraesCS4B01G382000 chr2A 429765863 429766864 1001 False 415.500000 492 84.133000 2688 3673 2 chr2A.!!$F2 985
6 TraesCS4B01G382000 chr3A 726838846 726839935 1089 False 333.666667 440 87.141333 2554 4452 3 chr3A.!!$F2 1898

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
393 394 0.030773 GAGCATATCGTGACGCTCCA 59.969 55.0 0.00 0.00 44.06 3.86 F
1580 1595 0.033796 CCATGGCTGGTTCCTCATGT 60.034 55.0 0.00 0.00 37.79 3.21 F
1621 1636 0.320683 TGCTCTGTGGATTCGGTGTG 60.321 55.0 0.00 0.00 0.00 3.82 F
1628 1643 0.392863 TGGATTCGGTGTGCAGATGG 60.393 55.0 0.00 0.00 0.00 3.51 F
2516 2597 1.081892 CCTTGCAGAATCACAGGTCG 58.918 55.0 0.00 0.00 0.00 4.79 F
3723 3896 0.323302 TCCAGCCATGAAGCACGTAA 59.677 50.0 0.00 0.00 34.23 3.18 F
4506 4680 0.174845 TCGATTGGTGTTCGCCTAGG 59.825 55.0 3.67 3.67 36.56 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1789 1865 0.029035 GCTGATTGCGCAGAAGGATG 59.971 55.000 11.31 0.0 38.14 3.51 R
2516 2597 1.896220 TTGAGACACCAACATCTGCC 58.104 50.000 0.00 0.0 0.00 4.85 R
2866 2947 4.438744 CCAACCCAATTTCTACTTCGATGC 60.439 45.833 0.00 0.0 0.00 3.91 R
3218 3312 5.269991 ACTGGAGTATTCTGTACTAAGCCA 58.730 41.667 0.00 0.0 0.00 4.75 R
4138 4312 0.521242 CAAGCCAGCATAAACGCGAC 60.521 55.000 15.93 0.0 36.85 5.19 R
4608 4785 0.387878 CGCAAGAGAGAAGCAGACGT 60.388 55.000 0.00 0.0 43.02 4.34 R
5395 5752 0.888736 CCCGGAAAGCATGTGTGTCA 60.889 55.000 0.73 0.0 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.500684 TCCTTGCATTGAGTAGATGAAAAC 57.499 37.500 0.00 0.00 0.00 2.43
25 26 6.003326 TCCTTGCATTGAGTAGATGAAAACA 58.997 36.000 0.00 0.00 0.00 2.83
26 27 6.489700 TCCTTGCATTGAGTAGATGAAAACAA 59.510 34.615 0.00 0.00 0.00 2.83
27 28 7.014134 TCCTTGCATTGAGTAGATGAAAACAAA 59.986 33.333 0.00 0.00 0.00 2.83
28 29 7.816031 CCTTGCATTGAGTAGATGAAAACAAAT 59.184 33.333 0.00 0.00 0.00 2.32
29 30 9.199982 CTTGCATTGAGTAGATGAAAACAAATT 57.800 29.630 0.00 0.00 0.00 1.82
35 36 9.677567 TTGAGTAGATGAAAACAAATTAAGCAC 57.322 29.630 0.00 0.00 0.00 4.40
36 37 8.015087 TGAGTAGATGAAAACAAATTAAGCACG 58.985 33.333 0.00 0.00 0.00 5.34
37 38 8.094798 AGTAGATGAAAACAAATTAAGCACGA 57.905 30.769 0.00 0.00 0.00 4.35
38 39 8.564574 AGTAGATGAAAACAAATTAAGCACGAA 58.435 29.630 0.00 0.00 0.00 3.85
39 40 7.858052 AGATGAAAACAAATTAAGCACGAAG 57.142 32.000 0.00 0.00 0.00 3.79
40 41 7.648142 AGATGAAAACAAATTAAGCACGAAGA 58.352 30.769 0.00 0.00 0.00 2.87
41 42 8.134895 AGATGAAAACAAATTAAGCACGAAGAA 58.865 29.630 0.00 0.00 0.00 2.52
42 43 8.641499 ATGAAAACAAATTAAGCACGAAGAAA 57.359 26.923 0.00 0.00 0.00 2.52
43 44 8.114359 TGAAAACAAATTAAGCACGAAGAAAG 57.886 30.769 0.00 0.00 0.00 2.62
44 45 7.757624 TGAAAACAAATTAAGCACGAAGAAAGT 59.242 29.630 0.00 0.00 0.00 2.66
45 46 8.474006 AAAACAAATTAAGCACGAAGAAAGTT 57.526 26.923 0.00 0.00 0.00 2.66
46 47 9.575783 AAAACAAATTAAGCACGAAGAAAGTTA 57.424 25.926 0.00 0.00 0.00 2.24
47 48 9.744468 AAACAAATTAAGCACGAAGAAAGTTAT 57.256 25.926 0.00 0.00 0.00 1.89
52 53 8.788325 ATTAAGCACGAAGAAAGTTATAAGGT 57.212 30.769 0.00 0.00 0.00 3.50
53 54 8.611654 TTAAGCACGAAGAAAGTTATAAGGTT 57.388 30.769 0.00 0.00 0.00 3.50
54 55 6.481954 AGCACGAAGAAAGTTATAAGGTTG 57.518 37.500 0.00 0.00 0.00 3.77
55 56 5.995897 AGCACGAAGAAAGTTATAAGGTTGT 59.004 36.000 0.00 0.00 0.00 3.32
56 57 6.485648 AGCACGAAGAAAGTTATAAGGTTGTT 59.514 34.615 0.00 0.00 0.00 2.83
57 58 6.795593 GCACGAAGAAAGTTATAAGGTTGTTC 59.204 38.462 0.00 7.43 0.00 3.18
58 59 7.519328 GCACGAAGAAAGTTATAAGGTTGTTCA 60.519 37.037 13.83 0.00 0.00 3.18
59 60 8.504005 CACGAAGAAAGTTATAAGGTTGTTCAT 58.496 33.333 13.83 1.89 0.00 2.57
60 61 8.504005 ACGAAGAAAGTTATAAGGTTGTTCATG 58.496 33.333 13.83 0.00 0.00 3.07
61 62 8.504005 CGAAGAAAGTTATAAGGTTGTTCATGT 58.496 33.333 13.83 0.00 0.00 3.21
62 63 9.612620 GAAGAAAGTTATAAGGTTGTTCATGTG 57.387 33.333 10.69 0.00 0.00 3.21
63 64 8.691661 AGAAAGTTATAAGGTTGTTCATGTGT 57.308 30.769 0.00 0.00 0.00 3.72
64 65 9.131791 AGAAAGTTATAAGGTTGTTCATGTGTT 57.868 29.630 0.00 0.00 0.00 3.32
65 66 9.180678 GAAAGTTATAAGGTTGTTCATGTGTTG 57.819 33.333 0.00 0.00 0.00 3.33
66 67 8.458573 AAGTTATAAGGTTGTTCATGTGTTGA 57.541 30.769 0.00 0.00 0.00 3.18
67 68 8.099364 AGTTATAAGGTTGTTCATGTGTTGAG 57.901 34.615 0.00 0.00 35.27 3.02
68 69 3.715628 AAGGTTGTTCATGTGTTGAGC 57.284 42.857 0.00 0.00 35.27 4.26
69 70 1.956477 AGGTTGTTCATGTGTTGAGCC 59.044 47.619 0.00 0.00 34.87 4.70
70 71 1.000274 GGTTGTTCATGTGTTGAGCCC 60.000 52.381 0.00 0.00 34.87 5.19
71 72 1.956477 GTTGTTCATGTGTTGAGCCCT 59.044 47.619 0.00 0.00 34.87 5.19
72 73 1.608055 TGTTCATGTGTTGAGCCCTG 58.392 50.000 0.00 0.00 34.87 4.45
73 74 1.133823 TGTTCATGTGTTGAGCCCTGT 60.134 47.619 0.00 0.00 34.87 4.00
74 75 1.267806 GTTCATGTGTTGAGCCCTGTG 59.732 52.381 0.00 0.00 35.27 3.66
75 76 0.250858 TCATGTGTTGAGCCCTGTGG 60.251 55.000 0.00 0.00 0.00 4.17
85 86 4.394712 CCCTGTGGGCTGACGACC 62.395 72.222 0.00 0.00 39.55 4.79
90 91 2.662596 TGGGCTGACGACCATGTC 59.337 61.111 0.00 0.00 45.79 3.06
91 92 1.913262 TGGGCTGACGACCATGTCT 60.913 57.895 0.00 0.00 45.79 3.41
92 93 1.153549 GGGCTGACGACCATGTCTC 60.154 63.158 0.00 0.00 38.64 3.36
93 94 1.608717 GGGCTGACGACCATGTCTCT 61.609 60.000 0.00 0.00 38.64 3.10
94 95 0.459237 GGCTGACGACCATGTCTCTG 60.459 60.000 0.00 0.00 39.64 3.35
95 96 1.080995 GCTGACGACCATGTCTCTGC 61.081 60.000 0.00 0.00 39.64 4.26
96 97 0.529833 CTGACGACCATGTCTCTGCT 59.470 55.000 0.00 0.00 39.64 4.24
97 98 0.969149 TGACGACCATGTCTCTGCTT 59.031 50.000 0.00 0.00 39.64 3.91
98 99 1.067565 TGACGACCATGTCTCTGCTTC 60.068 52.381 0.00 0.00 39.64 3.86
99 100 0.969149 ACGACCATGTCTCTGCTTCA 59.031 50.000 0.00 0.00 0.00 3.02
100 101 1.344438 ACGACCATGTCTCTGCTTCAA 59.656 47.619 0.00 0.00 0.00 2.69
101 102 1.998315 CGACCATGTCTCTGCTTCAAG 59.002 52.381 0.00 0.00 0.00 3.02
102 103 2.354259 GACCATGTCTCTGCTTCAAGG 58.646 52.381 0.00 0.00 0.00 3.61
103 104 1.004044 ACCATGTCTCTGCTTCAAGGG 59.996 52.381 0.00 0.00 0.00 3.95
104 105 1.004044 CCATGTCTCTGCTTCAAGGGT 59.996 52.381 0.00 0.00 0.00 4.34
105 106 2.082231 CATGTCTCTGCTTCAAGGGTG 58.918 52.381 0.00 0.00 0.00 4.61
106 107 0.397941 TGTCTCTGCTTCAAGGGTGG 59.602 55.000 0.00 0.00 0.00 4.61
107 108 0.322008 GTCTCTGCTTCAAGGGTGGG 60.322 60.000 0.00 0.00 0.00 4.61
108 109 1.676967 CTCTGCTTCAAGGGTGGGC 60.677 63.158 0.00 0.00 0.00 5.36
109 110 2.115910 CTGCTTCAAGGGTGGGCA 59.884 61.111 0.00 0.00 34.48 5.36
110 111 2.203480 TGCTTCAAGGGTGGGCAC 60.203 61.111 0.00 0.00 32.07 5.01
111 112 2.203480 GCTTCAAGGGTGGGCACA 60.203 61.111 0.00 0.00 0.00 4.57
112 113 1.832167 GCTTCAAGGGTGGGCACAA 60.832 57.895 0.00 0.00 0.00 3.33
113 114 1.398958 GCTTCAAGGGTGGGCACAAA 61.399 55.000 0.00 0.00 0.00 2.83
114 115 1.118838 CTTCAAGGGTGGGCACAAAA 58.881 50.000 0.00 0.00 0.00 2.44
115 116 1.693606 CTTCAAGGGTGGGCACAAAAT 59.306 47.619 0.00 0.00 0.00 1.82
116 117 1.337118 TCAAGGGTGGGCACAAAATC 58.663 50.000 0.00 0.00 0.00 2.17
117 118 1.047002 CAAGGGTGGGCACAAAATCA 58.953 50.000 0.00 0.00 0.00 2.57
118 119 1.001181 CAAGGGTGGGCACAAAATCAG 59.999 52.381 0.00 0.00 0.00 2.90
119 120 0.542702 AGGGTGGGCACAAAATCAGG 60.543 55.000 0.00 0.00 0.00 3.86
120 121 0.541764 GGGTGGGCACAAAATCAGGA 60.542 55.000 0.00 0.00 0.00 3.86
121 122 1.337118 GGTGGGCACAAAATCAGGAA 58.663 50.000 0.00 0.00 0.00 3.36
122 123 1.691434 GGTGGGCACAAAATCAGGAAA 59.309 47.619 0.00 0.00 0.00 3.13
123 124 2.103941 GGTGGGCACAAAATCAGGAAAA 59.896 45.455 0.00 0.00 0.00 2.29
124 125 3.432890 GGTGGGCACAAAATCAGGAAAAA 60.433 43.478 0.00 0.00 0.00 1.94
145 146 3.277142 AAAATATGTCCTCCACGACCC 57.723 47.619 0.00 0.00 31.35 4.46
146 147 1.874129 AATATGTCCTCCACGACCCA 58.126 50.000 0.00 0.00 31.35 4.51
147 148 1.120530 ATATGTCCTCCACGACCCAC 58.879 55.000 0.00 0.00 31.35 4.61
148 149 0.040646 TATGTCCTCCACGACCCACT 59.959 55.000 0.00 0.00 31.35 4.00
149 150 0.836400 ATGTCCTCCACGACCCACTT 60.836 55.000 0.00 0.00 31.35 3.16
150 151 1.052124 TGTCCTCCACGACCCACTTT 61.052 55.000 0.00 0.00 31.35 2.66
151 152 0.108019 GTCCTCCACGACCCACTTTT 59.892 55.000 0.00 0.00 0.00 2.27
152 153 0.841289 TCCTCCACGACCCACTTTTT 59.159 50.000 0.00 0.00 0.00 1.94
153 154 1.202722 TCCTCCACGACCCACTTTTTC 60.203 52.381 0.00 0.00 0.00 2.29
154 155 1.235724 CTCCACGACCCACTTTTTCC 58.764 55.000 0.00 0.00 0.00 3.13
155 156 0.841289 TCCACGACCCACTTTTTCCT 59.159 50.000 0.00 0.00 0.00 3.36
156 157 1.202722 TCCACGACCCACTTTTTCCTC 60.203 52.381 0.00 0.00 0.00 3.71
157 158 1.235724 CACGACCCACTTTTTCCTCC 58.764 55.000 0.00 0.00 0.00 4.30
158 159 0.109913 ACGACCCACTTTTTCCTCCC 59.890 55.000 0.00 0.00 0.00 4.30
159 160 0.400594 CGACCCACTTTTTCCTCCCT 59.599 55.000 0.00 0.00 0.00 4.20
160 161 1.626825 CGACCCACTTTTTCCTCCCTA 59.373 52.381 0.00 0.00 0.00 3.53
161 162 2.039348 CGACCCACTTTTTCCTCCCTAA 59.961 50.000 0.00 0.00 0.00 2.69
162 163 3.497227 CGACCCACTTTTTCCTCCCTAAA 60.497 47.826 0.00 0.00 0.00 1.85
163 164 4.079970 GACCCACTTTTTCCTCCCTAAAG 58.920 47.826 0.00 0.00 35.53 1.85
164 165 3.465966 ACCCACTTTTTCCTCCCTAAAGT 59.534 43.478 0.00 0.00 41.42 2.66
165 166 4.078805 ACCCACTTTTTCCTCCCTAAAGTT 60.079 41.667 0.00 0.00 39.40 2.66
166 167 4.899457 CCCACTTTTTCCTCCCTAAAGTTT 59.101 41.667 0.00 0.00 39.40 2.66
167 168 5.365605 CCCACTTTTTCCTCCCTAAAGTTTT 59.634 40.000 0.00 0.00 39.40 2.43
168 169 6.126883 CCCACTTTTTCCTCCCTAAAGTTTTT 60.127 38.462 0.00 0.00 39.40 1.94
169 170 6.761242 CCACTTTTTCCTCCCTAAAGTTTTTG 59.239 38.462 0.00 0.00 39.40 2.44
170 171 7.327975 CACTTTTTCCTCCCTAAAGTTTTTGT 58.672 34.615 0.00 0.00 39.40 2.83
171 172 7.822334 CACTTTTTCCTCCCTAAAGTTTTTGTT 59.178 33.333 0.00 0.00 39.40 2.83
172 173 8.380099 ACTTTTTCCTCCCTAAAGTTTTTGTTT 58.620 29.630 0.00 0.00 38.56 2.83
173 174 8.780846 TTTTTCCTCCCTAAAGTTTTTGTTTC 57.219 30.769 0.00 0.00 0.00 2.78
174 175 7.727578 TTTCCTCCCTAAAGTTTTTGTTTCT 57.272 32.000 0.00 0.00 0.00 2.52
175 176 8.826293 TTTCCTCCCTAAAGTTTTTGTTTCTA 57.174 30.769 0.00 0.00 0.00 2.10
176 177 9.429109 TTTCCTCCCTAAAGTTTTTGTTTCTAT 57.571 29.630 0.00 0.00 0.00 1.98
177 178 8.631480 TCCTCCCTAAAGTTTTTGTTTCTATC 57.369 34.615 0.00 0.00 0.00 2.08
178 179 7.389607 TCCTCCCTAAAGTTTTTGTTTCTATCG 59.610 37.037 0.00 0.00 0.00 2.92
179 180 7.389607 CCTCCCTAAAGTTTTTGTTTCTATCGA 59.610 37.037 0.00 0.00 0.00 3.59
180 181 8.680039 TCCCTAAAGTTTTTGTTTCTATCGAA 57.320 30.769 0.00 0.00 0.00 3.71
181 182 9.292195 TCCCTAAAGTTTTTGTTTCTATCGAAT 57.708 29.630 0.00 0.00 0.00 3.34
182 183 9.908152 CCCTAAAGTTTTTGTTTCTATCGAATT 57.092 29.630 0.00 0.00 0.00 2.17
188 189 9.463443 AGTTTTTGTTTCTATCGAATTTGAAGG 57.537 29.630 0.00 0.00 0.00 3.46
189 190 9.244799 GTTTTTGTTTCTATCGAATTTGAAGGT 57.755 29.630 0.00 0.00 0.00 3.50
190 191 9.458374 TTTTTGTTTCTATCGAATTTGAAGGTC 57.542 29.630 0.00 0.00 0.00 3.85
191 192 7.979444 TTGTTTCTATCGAATTTGAAGGTCT 57.021 32.000 0.00 0.00 0.00 3.85
192 193 7.596749 TGTTTCTATCGAATTTGAAGGTCTC 57.403 36.000 0.00 0.00 0.00 3.36
193 194 7.386851 TGTTTCTATCGAATTTGAAGGTCTCT 58.613 34.615 0.00 0.00 0.00 3.10
194 195 7.878127 TGTTTCTATCGAATTTGAAGGTCTCTT 59.122 33.333 0.00 0.00 35.62 2.85
195 196 8.722394 GTTTCTATCGAATTTGAAGGTCTCTTT 58.278 33.333 0.00 0.00 32.52 2.52
196 197 9.938280 TTTCTATCGAATTTGAAGGTCTCTTTA 57.062 29.630 0.00 0.00 32.52 1.85
202 203 9.884636 TCGAATTTGAAGGTCTCTTTATATTGA 57.115 29.630 0.00 0.00 32.52 2.57
232 233 2.317530 ACCTGGTGTGAACCAACCT 58.682 52.632 0.00 0.00 39.61 3.50
233 234 0.106719 ACCTGGTGTGAACCAACCTG 60.107 55.000 0.00 0.00 39.61 4.00
234 235 0.106719 CCTGGTGTGAACCAACCTGT 60.107 55.000 0.00 0.00 39.61 4.00
235 236 1.024271 CTGGTGTGAACCAACCTGTG 58.976 55.000 0.00 0.00 39.61 3.66
244 245 3.882131 CCAACCTGTGGTATCCCAG 57.118 57.895 0.00 0.00 42.94 4.45
245 246 0.394352 CCAACCTGTGGTATCCCAGC 60.394 60.000 0.00 0.00 42.94 4.85
246 247 0.394352 CAACCTGTGGTATCCCAGCC 60.394 60.000 0.00 0.00 42.94 4.85
247 248 1.571773 AACCTGTGGTATCCCAGCCC 61.572 60.000 0.00 0.00 42.94 5.19
248 249 2.000701 CCTGTGGTATCCCAGCCCA 61.001 63.158 0.00 0.00 42.94 5.36
250 251 2.270874 CTGTGGTATCCCAGCCCACC 62.271 65.000 5.66 0.00 46.49 4.61
251 252 3.087253 TGGTATCCCAGCCCACCG 61.087 66.667 0.00 0.00 35.17 4.94
252 253 3.873812 GGTATCCCAGCCCACCGG 61.874 72.222 0.00 0.00 0.00 5.28
265 266 1.530323 CCACCGGGGTTTAAGTCTTG 58.470 55.000 6.32 0.00 0.00 3.02
266 267 1.072648 CCACCGGGGTTTAAGTCTTGA 59.927 52.381 6.32 0.00 0.00 3.02
267 268 2.290705 CCACCGGGGTTTAAGTCTTGAT 60.291 50.000 6.32 0.00 0.00 2.57
268 269 2.747446 CACCGGGGTTTAAGTCTTGATG 59.253 50.000 6.32 0.00 0.00 3.07
269 270 1.743394 CCGGGGTTTAAGTCTTGATGC 59.257 52.381 0.00 0.00 0.00 3.91
270 271 2.618045 CCGGGGTTTAAGTCTTGATGCT 60.618 50.000 0.00 0.00 0.00 3.79
271 272 2.678336 CGGGGTTTAAGTCTTGATGCTC 59.322 50.000 0.00 0.00 0.00 4.26
272 273 2.678336 GGGGTTTAAGTCTTGATGCTCG 59.322 50.000 0.00 0.00 0.00 5.03
273 274 2.096013 GGGTTTAAGTCTTGATGCTCGC 59.904 50.000 0.00 0.00 0.00 5.03
274 275 2.742053 GGTTTAAGTCTTGATGCTCGCA 59.258 45.455 0.00 0.00 0.00 5.10
275 276 3.188460 GGTTTAAGTCTTGATGCTCGCAA 59.812 43.478 0.00 0.00 0.00 4.85
276 277 4.151798 GTTTAAGTCTTGATGCTCGCAAC 58.848 43.478 0.00 0.00 0.00 4.17
277 278 1.882912 AAGTCTTGATGCTCGCAACA 58.117 45.000 0.00 0.00 0.00 3.33
278 279 2.105006 AGTCTTGATGCTCGCAACAT 57.895 45.000 2.68 0.00 0.00 2.71
279 280 2.430465 AGTCTTGATGCTCGCAACATT 58.570 42.857 2.68 0.00 0.00 2.71
280 281 3.599343 AGTCTTGATGCTCGCAACATTA 58.401 40.909 2.68 0.00 0.00 1.90
281 282 3.372206 AGTCTTGATGCTCGCAACATTAC 59.628 43.478 2.68 4.91 0.00 1.89
282 283 2.677836 TCTTGATGCTCGCAACATTACC 59.322 45.455 2.68 0.00 0.00 2.85
283 284 2.106477 TGATGCTCGCAACATTACCA 57.894 45.000 0.00 0.00 0.00 3.25
284 285 1.737236 TGATGCTCGCAACATTACCAC 59.263 47.619 0.00 0.00 0.00 4.16
285 286 1.064060 GATGCTCGCAACATTACCACC 59.936 52.381 0.00 0.00 0.00 4.61
286 287 0.036164 TGCTCGCAACATTACCACCT 59.964 50.000 0.00 0.00 0.00 4.00
287 288 0.447801 GCTCGCAACATTACCACCTG 59.552 55.000 0.00 0.00 0.00 4.00
288 289 1.943968 GCTCGCAACATTACCACCTGA 60.944 52.381 0.00 0.00 0.00 3.86
289 290 2.632377 CTCGCAACATTACCACCTGAT 58.368 47.619 0.00 0.00 0.00 2.90
290 291 3.009723 CTCGCAACATTACCACCTGATT 58.990 45.455 0.00 0.00 0.00 2.57
291 292 2.746904 TCGCAACATTACCACCTGATTG 59.253 45.455 0.00 0.00 0.00 2.67
292 293 2.159393 CGCAACATTACCACCTGATTGG 60.159 50.000 0.00 0.00 43.04 3.16
312 313 6.896021 TTGGTTTACAATAAATTCCACCGA 57.104 33.333 0.00 0.00 33.18 4.69
313 314 7.469537 TTGGTTTACAATAAATTCCACCGAT 57.530 32.000 0.00 0.00 33.18 4.18
314 315 7.469537 TGGTTTACAATAAATTCCACCGATT 57.530 32.000 0.00 0.00 0.00 3.34
315 316 7.897864 TGGTTTACAATAAATTCCACCGATTT 58.102 30.769 0.00 0.00 0.00 2.17
316 317 9.021807 TGGTTTACAATAAATTCCACCGATTTA 57.978 29.630 0.00 0.00 34.51 1.40
328 329 8.792830 ATTCCACCGATTTATATATTGTCTGG 57.207 34.615 0.00 0.00 0.00 3.86
329 330 7.311092 TCCACCGATTTATATATTGTCTGGT 57.689 36.000 0.00 0.00 0.00 4.00
330 331 7.158697 TCCACCGATTTATATATTGTCTGGTG 58.841 38.462 14.46 14.46 42.05 4.17
331 332 6.934645 CCACCGATTTATATATTGTCTGGTGT 59.065 38.462 17.60 0.00 41.09 4.16
332 333 7.117812 CCACCGATTTATATATTGTCTGGTGTC 59.882 40.741 17.60 0.00 41.09 3.67
333 334 7.117812 CACCGATTTATATATTGTCTGGTGTCC 59.882 40.741 13.70 0.00 38.59 4.02
334 335 6.310467 CCGATTTATATATTGTCTGGTGTCCG 59.690 42.308 0.00 0.00 0.00 4.79
335 336 7.088272 CGATTTATATATTGTCTGGTGTCCGA 58.912 38.462 0.00 0.00 0.00 4.55
336 337 7.597369 CGATTTATATATTGTCTGGTGTCCGAA 59.403 37.037 0.00 0.00 0.00 4.30
337 338 9.436957 GATTTATATATTGTCTGGTGTCCGAAT 57.563 33.333 0.00 0.00 0.00 3.34
338 339 8.601845 TTTATATATTGTCTGGTGTCCGAATG 57.398 34.615 0.00 0.00 0.00 2.67
339 340 1.453155 ATTGTCTGGTGTCCGAATGC 58.547 50.000 0.00 0.00 0.00 3.56
340 341 0.948623 TTGTCTGGTGTCCGAATGCG 60.949 55.000 0.00 0.00 37.24 4.73
341 342 1.080093 GTCTGGTGTCCGAATGCGA 60.080 57.895 0.00 0.00 40.82 5.10
342 343 0.460284 GTCTGGTGTCCGAATGCGAT 60.460 55.000 0.00 0.00 40.82 4.58
343 344 0.460109 TCTGGTGTCCGAATGCGATG 60.460 55.000 0.00 0.00 40.82 3.84
344 345 0.460109 CTGGTGTCCGAATGCGATGA 60.460 55.000 0.00 0.00 40.82 2.92
345 346 0.036858 TGGTGTCCGAATGCGATGAA 60.037 50.000 0.00 0.00 40.82 2.57
346 347 0.652592 GGTGTCCGAATGCGATGAAG 59.347 55.000 0.00 0.00 40.82 3.02
347 348 0.652592 GTGTCCGAATGCGATGAAGG 59.347 55.000 0.00 0.00 40.82 3.46
348 349 0.534873 TGTCCGAATGCGATGAAGGA 59.465 50.000 0.00 0.00 40.82 3.36
349 350 0.931005 GTCCGAATGCGATGAAGGAC 59.069 55.000 0.00 4.52 40.85 3.85
350 351 0.527600 TCCGAATGCGATGAAGGACG 60.528 55.000 0.00 0.00 40.82 4.79
356 357 4.294523 CGATGAAGGACGCCCAAA 57.705 55.556 0.00 0.00 33.88 3.28
357 358 1.794222 CGATGAAGGACGCCCAAAC 59.206 57.895 0.00 0.00 33.88 2.93
358 359 1.644786 CGATGAAGGACGCCCAAACC 61.645 60.000 0.00 0.00 33.88 3.27
359 360 1.304134 ATGAAGGACGCCCAAACCC 60.304 57.895 0.00 0.00 33.88 4.11
360 361 1.789576 ATGAAGGACGCCCAAACCCT 61.790 55.000 0.00 0.00 33.88 4.34
361 362 1.674651 GAAGGACGCCCAAACCCTC 60.675 63.158 0.00 0.00 33.88 4.30
362 363 3.205851 AAGGACGCCCAAACCCTCC 62.206 63.158 0.00 0.00 33.88 4.30
364 365 4.324991 GACGCCCAAACCCTCCGT 62.325 66.667 0.00 0.00 34.52 4.69
365 366 3.837570 GACGCCCAAACCCTCCGTT 62.838 63.158 0.00 0.00 35.70 4.44
366 367 3.361977 CGCCCAAACCCTCCGTTG 61.362 66.667 0.00 0.00 33.93 4.10
367 368 2.989253 GCCCAAACCCTCCGTTGG 60.989 66.667 0.00 0.00 33.93 3.77
368 369 2.989253 CCCAAACCCTCCGTTGGC 60.989 66.667 0.00 0.00 33.93 4.52
369 370 3.361977 CCAAACCCTCCGTTGGCG 61.362 66.667 0.00 0.00 33.93 5.69
370 371 2.593436 CAAACCCTCCGTTGGCGT 60.593 61.111 0.00 0.00 33.93 5.68
371 372 2.593436 AAACCCTCCGTTGGCGTG 60.593 61.111 0.00 0.00 33.93 5.34
380 381 2.817834 GTTGGCGTGCCGAGCATA 60.818 61.111 6.37 0.00 41.91 3.14
381 382 2.180204 GTTGGCGTGCCGAGCATAT 61.180 57.895 6.37 0.00 41.91 1.78
382 383 1.887242 TTGGCGTGCCGAGCATATC 60.887 57.895 6.37 0.00 41.91 1.63
390 391 4.616592 CGAGCATATCGTGACGCT 57.383 55.556 0.00 0.00 46.62 5.07
391 392 2.414950 CGAGCATATCGTGACGCTC 58.585 57.895 0.00 0.00 46.62 5.03
392 393 0.999228 CGAGCATATCGTGACGCTCC 60.999 60.000 0.00 0.00 46.47 4.70
393 394 0.030773 GAGCATATCGTGACGCTCCA 59.969 55.000 0.00 0.00 44.06 3.86
394 395 0.676184 AGCATATCGTGACGCTCCAT 59.324 50.000 0.00 0.00 0.00 3.41
395 396 0.786581 GCATATCGTGACGCTCCATG 59.213 55.000 0.00 2.02 0.00 3.66
396 397 1.422388 CATATCGTGACGCTCCATGG 58.578 55.000 4.97 4.97 0.00 3.66
397 398 1.000274 CATATCGTGACGCTCCATGGA 60.000 52.381 15.27 15.27 0.00 3.41
398 399 0.384309 TATCGTGACGCTCCATGGAC 59.616 55.000 11.44 7.30 0.00 4.02
399 400 2.298158 ATCGTGACGCTCCATGGACC 62.298 60.000 11.44 3.09 0.00 4.46
400 401 2.982130 GTGACGCTCCATGGACCT 59.018 61.111 11.44 0.00 0.00 3.85
401 402 1.153549 GTGACGCTCCATGGACCTC 60.154 63.158 11.44 5.99 0.00 3.85
402 403 2.105128 GACGCTCCATGGACCTCG 59.895 66.667 11.44 16.44 0.00 4.63
403 404 2.680352 ACGCTCCATGGACCTCGT 60.680 61.111 20.12 20.12 0.00 4.18
404 405 2.105128 CGCTCCATGGACCTCGTC 59.895 66.667 11.44 0.00 0.00 4.20
412 413 4.237445 GGACCTCGTCCGATGAGA 57.763 61.111 17.77 0.00 43.14 3.27
413 414 2.490165 GGACCTCGTCCGATGAGAA 58.510 57.895 17.77 0.00 43.14 2.87
414 415 1.033574 GGACCTCGTCCGATGAGAAT 58.966 55.000 17.77 6.62 43.14 2.40
415 416 1.269309 GGACCTCGTCCGATGAGAATG 60.269 57.143 17.77 5.24 43.14 2.67
416 417 1.405821 GACCTCGTCCGATGAGAATGT 59.594 52.381 17.77 8.17 33.07 2.71
417 418 1.135139 ACCTCGTCCGATGAGAATGTG 59.865 52.381 17.77 4.59 33.07 3.21
418 419 1.536922 CCTCGTCCGATGAGAATGTGG 60.537 57.143 17.77 0.00 33.07 4.17
419 420 0.179111 TCGTCCGATGAGAATGTGGC 60.179 55.000 0.00 0.00 0.00 5.01
420 421 0.460109 CGTCCGATGAGAATGTGGCA 60.460 55.000 0.00 0.00 0.00 4.92
421 422 1.009829 GTCCGATGAGAATGTGGCAC 58.990 55.000 11.55 11.55 0.00 5.01
422 423 0.612744 TCCGATGAGAATGTGGCACA 59.387 50.000 24.36 24.36 0.00 4.57
423 424 1.210234 TCCGATGAGAATGTGGCACAT 59.790 47.619 26.78 26.78 44.52 3.21
424 425 1.600957 CCGATGAGAATGTGGCACATC 59.399 52.381 31.47 23.16 44.52 3.06
426 427 2.283298 GATGAGAATGTGGCACATCGT 58.717 47.619 31.47 21.69 44.52 3.73
427 428 1.441738 TGAGAATGTGGCACATCGTG 58.558 50.000 31.47 0.00 44.52 4.35
436 437 3.879682 CACATCGTGCCCGCCATG 61.880 66.667 0.00 0.00 0.00 3.66
503 504 4.664062 CATTCTCCAATGCCCCGT 57.336 55.556 0.00 0.00 33.19 5.28
504 505 3.798794 CATTCTCCAATGCCCCGTA 57.201 52.632 0.00 0.00 33.19 4.02
505 506 2.276732 CATTCTCCAATGCCCCGTAT 57.723 50.000 0.00 0.00 33.19 3.06
506 507 1.881973 CATTCTCCAATGCCCCGTATG 59.118 52.381 0.00 0.00 33.19 2.39
507 508 0.182537 TTCTCCAATGCCCCGTATGG 59.817 55.000 0.00 0.00 0.00 2.74
508 509 0.986019 TCTCCAATGCCCCGTATGGT 60.986 55.000 0.00 0.00 34.50 3.55
509 510 0.819259 CTCCAATGCCCCGTATGGTG 60.819 60.000 0.00 0.00 34.50 4.17
510 511 2.489275 CCAATGCCCCGTATGGTGC 61.489 63.158 0.78 0.78 0.00 5.01
511 512 1.752310 CAATGCCCCGTATGGTGCA 60.752 57.895 13.84 13.84 42.22 4.57
512 513 1.453745 AATGCCCCGTATGGTGCAG 60.454 57.895 16.52 0.00 41.61 4.41
513 514 4.794648 TGCCCCGTATGGTGCAGC 62.795 66.667 7.08 9.47 35.98 5.25
514 515 4.794648 GCCCCGTATGGTGCAGCA 62.795 66.667 22.56 22.56 32.38 4.41
515 516 2.514592 CCCCGTATGGTGCAGCAG 60.515 66.667 24.45 10.59 0.00 4.24
516 517 2.268920 CCCGTATGGTGCAGCAGT 59.731 61.111 24.45 14.21 0.00 4.40
517 518 1.815421 CCCGTATGGTGCAGCAGTC 60.815 63.158 24.45 17.06 0.00 3.51
518 519 1.815421 CCGTATGGTGCAGCAGTCC 60.815 63.158 24.45 12.68 0.00 3.85
519 520 2.167219 CGTATGGTGCAGCAGTCCG 61.167 63.158 24.45 19.89 0.00 4.79
520 521 1.815421 GTATGGTGCAGCAGTCCGG 60.815 63.158 24.45 0.00 0.00 5.14
521 522 1.987306 TATGGTGCAGCAGTCCGGA 60.987 57.895 24.45 0.00 0.00 5.14
522 523 2.238847 TATGGTGCAGCAGTCCGGAC 62.239 60.000 27.67 27.67 0.00 4.79
529 530 4.980805 GCAGTCCGGACGCCACAA 62.981 66.667 29.29 0.00 36.20 3.33
530 531 3.041940 CAGTCCGGACGCCACAAC 61.042 66.667 28.26 2.95 36.20 3.32
531 532 4.309950 AGTCCGGACGCCACAACC 62.310 66.667 28.26 1.46 36.20 3.77
539 540 4.444024 CGCCACAACCGCGTCATG 62.444 66.667 4.92 3.17 44.55 3.07
540 541 4.101790 GCCACAACCGCGTCATGG 62.102 66.667 4.92 8.48 0.00 3.66
541 542 2.668212 CCACAACCGCGTCATGGT 60.668 61.111 4.92 0.00 42.98 3.55
542 543 2.555782 CACAACCGCGTCATGGTG 59.444 61.111 4.92 0.00 40.35 4.17
543 544 2.668212 ACAACCGCGTCATGGTGG 60.668 61.111 4.92 0.00 40.35 4.61
544 545 2.358125 CAACCGCGTCATGGTGGA 60.358 61.111 4.92 0.00 40.35 4.02
545 546 2.358247 AACCGCGTCATGGTGGAC 60.358 61.111 4.92 0.00 40.35 4.02
551 552 2.813908 GTCATGGTGGACGTCGCC 60.814 66.667 17.61 17.61 46.03 5.54
566 567 3.490759 GCCGGCTCGTGTGTCATG 61.491 66.667 22.15 0.00 0.00 3.07
567 568 3.490759 CCGGCTCGTGTGTCATGC 61.491 66.667 0.00 0.00 0.00 4.06
568 569 3.490759 CGGCTCGTGTGTCATGCC 61.491 66.667 0.00 0.00 40.14 4.40
569 570 3.127533 GGCTCGTGTGTCATGCCC 61.128 66.667 0.00 0.00 37.81 5.36
570 571 2.046892 GCTCGTGTGTCATGCCCT 60.047 61.111 0.00 0.00 0.00 5.19
571 572 1.218047 GCTCGTGTGTCATGCCCTA 59.782 57.895 0.00 0.00 0.00 3.53
572 573 1.084370 GCTCGTGTGTCATGCCCTAC 61.084 60.000 0.00 0.00 0.00 3.18
573 574 0.532573 CTCGTGTGTCATGCCCTACT 59.467 55.000 0.00 0.00 0.00 2.57
574 575 0.530744 TCGTGTGTCATGCCCTACTC 59.469 55.000 0.00 0.00 0.00 2.59
575 576 0.532573 CGTGTGTCATGCCCTACTCT 59.467 55.000 0.00 0.00 0.00 3.24
576 577 1.749063 CGTGTGTCATGCCCTACTCTA 59.251 52.381 0.00 0.00 0.00 2.43
577 578 2.479730 CGTGTGTCATGCCCTACTCTAC 60.480 54.545 0.00 0.00 0.00 2.59
578 579 2.108168 TGTGTCATGCCCTACTCTACC 58.892 52.381 0.00 0.00 0.00 3.18
579 580 2.292257 TGTGTCATGCCCTACTCTACCT 60.292 50.000 0.00 0.00 0.00 3.08
580 581 2.766828 GTGTCATGCCCTACTCTACCTT 59.233 50.000 0.00 0.00 0.00 3.50
581 582 2.766263 TGTCATGCCCTACTCTACCTTG 59.234 50.000 0.00 0.00 0.00 3.61
582 583 1.762957 TCATGCCCTACTCTACCTTGC 59.237 52.381 0.00 0.00 0.00 4.01
583 584 1.132500 ATGCCCTACTCTACCTTGCC 58.868 55.000 0.00 0.00 0.00 4.52
584 585 1.327690 TGCCCTACTCTACCTTGCCG 61.328 60.000 0.00 0.00 0.00 5.69
585 586 1.041447 GCCCTACTCTACCTTGCCGA 61.041 60.000 0.00 0.00 0.00 5.54
586 587 0.745468 CCCTACTCTACCTTGCCGAC 59.255 60.000 0.00 0.00 0.00 4.79
587 588 0.381089 CCTACTCTACCTTGCCGACG 59.619 60.000 0.00 0.00 0.00 5.12
588 589 0.248539 CTACTCTACCTTGCCGACGC 60.249 60.000 0.00 0.00 0.00 5.19
589 590 1.660560 TACTCTACCTTGCCGACGCC 61.661 60.000 0.00 0.00 0.00 5.68
590 591 3.718210 CTCTACCTTGCCGACGCCC 62.718 68.421 0.00 0.00 0.00 6.13
591 592 4.077184 CTACCTTGCCGACGCCCA 62.077 66.667 0.00 0.00 0.00 5.36
592 593 3.599285 CTACCTTGCCGACGCCCAA 62.599 63.158 0.00 0.00 0.00 4.12
593 594 3.179888 TACCTTGCCGACGCCCAAA 62.180 57.895 0.00 0.00 0.00 3.28
594 595 4.038080 CCTTGCCGACGCCCAAAC 62.038 66.667 0.00 0.00 0.00 2.93
595 596 4.038080 CTTGCCGACGCCCAAACC 62.038 66.667 0.00 0.00 0.00 3.27
596 597 4.877619 TTGCCGACGCCCAAACCA 62.878 61.111 0.00 0.00 0.00 3.67
597 598 4.877619 TGCCGACGCCCAAACCAA 62.878 61.111 0.00 0.00 0.00 3.67
598 599 4.337060 GCCGACGCCCAAACCAAC 62.337 66.667 0.00 0.00 0.00 3.77
599 600 2.902846 CCGACGCCCAAACCAACA 60.903 61.111 0.00 0.00 0.00 3.33
600 601 2.330041 CGACGCCCAAACCAACAC 59.670 61.111 0.00 0.00 0.00 3.32
601 602 2.184167 CGACGCCCAAACCAACACT 61.184 57.895 0.00 0.00 0.00 3.55
602 603 1.652563 GACGCCCAAACCAACACTC 59.347 57.895 0.00 0.00 0.00 3.51
603 604 1.792118 GACGCCCAAACCAACACTCC 61.792 60.000 0.00 0.00 0.00 3.85
604 605 1.826054 CGCCCAAACCAACACTCCA 60.826 57.895 0.00 0.00 0.00 3.86
605 606 1.388065 CGCCCAAACCAACACTCCAA 61.388 55.000 0.00 0.00 0.00 3.53
606 607 0.389025 GCCCAAACCAACACTCCAAG 59.611 55.000 0.00 0.00 0.00 3.61
607 608 1.039856 CCCAAACCAACACTCCAAGG 58.960 55.000 0.00 0.00 0.00 3.61
608 609 1.039856 CCAAACCAACACTCCAAGGG 58.960 55.000 0.00 0.00 0.00 3.95
609 610 1.039856 CAAACCAACACTCCAAGGGG 58.960 55.000 0.00 0.00 0.00 4.79
610 611 0.759060 AAACCAACACTCCAAGGGGC 60.759 55.000 0.00 0.00 0.00 5.80
611 612 2.672996 CCAACACTCCAAGGGGCG 60.673 66.667 0.00 0.00 0.00 6.13
612 613 3.365265 CAACACTCCAAGGGGCGC 61.365 66.667 0.00 0.00 0.00 6.53
613 614 3.884774 AACACTCCAAGGGGCGCA 61.885 61.111 10.83 0.00 0.00 6.09
614 615 3.429372 AACACTCCAAGGGGCGCAA 62.429 57.895 10.83 0.00 0.00 4.85
615 616 3.365265 CACTCCAAGGGGCGCAAC 61.365 66.667 10.83 0.00 0.00 4.17
616 617 4.660938 ACTCCAAGGGGCGCAACC 62.661 66.667 10.83 11.52 37.93 3.77
617 618 4.659172 CTCCAAGGGGCGCAACCA 62.659 66.667 20.55 1.18 42.05 3.67
618 619 4.659172 TCCAAGGGGCGCAACCAG 62.659 66.667 20.55 12.83 42.05 4.00
628 629 4.947147 GCAACCAGCCACCGGACA 62.947 66.667 9.46 0.00 37.23 4.02
629 630 2.034066 CAACCAGCCACCGGACAT 59.966 61.111 9.46 0.00 0.00 3.06
630 631 2.034066 AACCAGCCACCGGACATG 59.966 61.111 9.46 0.00 0.00 3.21
631 632 3.567579 AACCAGCCACCGGACATGG 62.568 63.158 9.46 13.28 40.50 3.66
632 633 4.802051 CCAGCCACCGGACATGGG 62.802 72.222 9.46 2.12 37.73 4.00
655 656 4.493747 CGGAGCCGGACGAGTTCC 62.494 72.222 5.05 0.24 41.75 3.62
664 665 2.358939 GGACGAGTTCCGCTTAAAGA 57.641 50.000 0.00 0.00 43.32 2.52
665 666 2.889852 GGACGAGTTCCGCTTAAAGAT 58.110 47.619 0.00 0.00 43.32 2.40
666 667 2.603560 GGACGAGTTCCGCTTAAAGATG 59.396 50.000 0.00 0.00 43.32 2.90
667 668 3.508762 GACGAGTTCCGCTTAAAGATGA 58.491 45.455 0.00 0.00 43.32 2.92
668 669 4.113354 GACGAGTTCCGCTTAAAGATGAT 58.887 43.478 0.00 0.00 43.32 2.45
669 670 5.258456 ACGAGTTCCGCTTAAAGATGATA 57.742 39.130 0.00 0.00 43.32 2.15
670 671 5.844004 ACGAGTTCCGCTTAAAGATGATAT 58.156 37.500 0.00 0.00 43.32 1.63
671 672 6.281405 ACGAGTTCCGCTTAAAGATGATATT 58.719 36.000 0.00 0.00 43.32 1.28
672 673 6.201044 ACGAGTTCCGCTTAAAGATGATATTG 59.799 38.462 0.00 0.00 43.32 1.90
673 674 6.420903 CGAGTTCCGCTTAAAGATGATATTGA 59.579 38.462 0.00 0.00 0.00 2.57
674 675 7.116948 CGAGTTCCGCTTAAAGATGATATTGAT 59.883 37.037 0.00 0.00 0.00 2.57
675 676 8.682936 AGTTCCGCTTAAAGATGATATTGATT 57.317 30.769 0.00 0.00 0.00 2.57
676 677 8.778358 AGTTCCGCTTAAAGATGATATTGATTC 58.222 33.333 0.00 0.00 0.00 2.52
677 678 7.351414 TCCGCTTAAAGATGATATTGATTCG 57.649 36.000 0.00 0.00 0.00 3.34
678 679 7.151976 TCCGCTTAAAGATGATATTGATTCGA 58.848 34.615 0.00 0.00 0.00 3.71
679 680 7.655732 TCCGCTTAAAGATGATATTGATTCGAA 59.344 33.333 0.00 0.00 0.00 3.71
680 681 7.954248 CCGCTTAAAGATGATATTGATTCGAAG 59.046 37.037 3.35 0.00 0.00 3.79
681 682 8.491152 CGCTTAAAGATGATATTGATTCGAAGT 58.509 33.333 3.35 0.00 0.00 3.01
695 696 7.979444 TGATTCGAAGTTTCTAATTTGAGGT 57.021 32.000 3.35 0.00 0.00 3.85
696 697 9.496873 TTGATTCGAAGTTTCTAATTTGAGGTA 57.503 29.630 3.35 0.00 0.00 3.08
697 698 9.667107 TGATTCGAAGTTTCTAATTTGAGGTAT 57.333 29.630 3.35 0.00 0.00 2.73
699 700 9.892130 ATTCGAAGTTTCTAATTTGAGGTATCT 57.108 29.630 3.35 0.00 0.00 1.98
700 701 8.703604 TCGAAGTTTCTAATTTGAGGTATCTG 57.296 34.615 0.00 0.00 0.00 2.90
701 702 8.528643 TCGAAGTTTCTAATTTGAGGTATCTGA 58.471 33.333 0.00 0.00 0.00 3.27
702 703 9.151471 CGAAGTTTCTAATTTGAGGTATCTGAA 57.849 33.333 0.00 0.00 0.00 3.02
704 705 8.480643 AGTTTCTAATTTGAGGTATCTGAACG 57.519 34.615 0.00 0.00 0.00 3.95
705 706 8.095169 AGTTTCTAATTTGAGGTATCTGAACGT 58.905 33.333 0.00 0.00 0.00 3.99
706 707 7.827819 TTCTAATTTGAGGTATCTGAACGTG 57.172 36.000 0.00 0.00 0.00 4.49
707 708 6.338146 TCTAATTTGAGGTATCTGAACGTGG 58.662 40.000 0.00 0.00 0.00 4.94
708 709 4.819105 ATTTGAGGTATCTGAACGTGGA 57.181 40.909 0.00 0.00 0.00 4.02
709 710 4.610605 TTTGAGGTATCTGAACGTGGAA 57.389 40.909 0.00 0.00 0.00 3.53
710 711 4.819105 TTGAGGTATCTGAACGTGGAAT 57.181 40.909 0.00 0.00 0.00 3.01
711 712 4.819105 TGAGGTATCTGAACGTGGAATT 57.181 40.909 0.00 0.00 0.00 2.17
712 713 4.755411 TGAGGTATCTGAACGTGGAATTC 58.245 43.478 0.00 0.00 0.00 2.17
713 714 4.221924 TGAGGTATCTGAACGTGGAATTCA 59.778 41.667 7.93 0.00 34.89 2.57
714 715 5.104941 TGAGGTATCTGAACGTGGAATTCAT 60.105 40.000 7.93 0.00 35.57 2.57
715 716 5.745227 AGGTATCTGAACGTGGAATTCATT 58.255 37.500 7.93 0.00 35.57 2.57
716 717 6.180472 AGGTATCTGAACGTGGAATTCATTT 58.820 36.000 7.93 0.00 35.57 2.32
717 718 6.659242 AGGTATCTGAACGTGGAATTCATTTT 59.341 34.615 7.93 0.00 35.57 1.82
718 719 7.176690 AGGTATCTGAACGTGGAATTCATTTTT 59.823 33.333 7.93 0.00 35.57 1.94
735 736 2.459060 TTTTTAGGCGTGATCGGTCA 57.541 45.000 0.00 0.00 37.56 4.02
744 745 3.886044 TGATCGGTCACTGTGTCAC 57.114 52.632 7.79 0.00 0.00 3.67
745 746 0.039527 TGATCGGTCACTGTGTCACG 60.040 55.000 7.79 10.73 0.00 4.35
746 747 0.732880 GATCGGTCACTGTGTCACGG 60.733 60.000 10.40 10.40 0.00 4.94
747 748 1.176619 ATCGGTCACTGTGTCACGGA 61.177 55.000 18.86 9.57 0.00 4.69
748 749 1.660575 CGGTCACTGTGTCACGGAC 60.661 63.158 18.86 14.65 0.00 4.79
749 750 1.440060 GGTCACTGTGTCACGGACA 59.560 57.895 18.86 3.02 40.50 4.02
750 751 0.179094 GGTCACTGTGTCACGGACAA 60.179 55.000 18.86 0.51 44.49 3.18
751 752 1.209128 GTCACTGTGTCACGGACAAG 58.791 55.000 18.86 2.27 44.49 3.16
752 753 1.107945 TCACTGTGTCACGGACAAGA 58.892 50.000 18.86 7.66 44.49 3.02
753 754 1.478916 TCACTGTGTCACGGACAAGAA 59.521 47.619 18.86 0.00 44.49 2.52
754 755 2.093921 TCACTGTGTCACGGACAAGAAA 60.094 45.455 18.86 0.00 44.49 2.52
755 756 2.285220 CACTGTGTCACGGACAAGAAAG 59.715 50.000 18.86 0.00 44.49 2.62
756 757 2.093658 ACTGTGTCACGGACAAGAAAGT 60.094 45.455 18.86 0.00 44.49 2.66
757 758 3.131577 ACTGTGTCACGGACAAGAAAGTA 59.868 43.478 18.86 0.00 44.49 2.24
758 759 3.450578 TGTGTCACGGACAAGAAAGTAC 58.549 45.455 8.09 0.00 44.49 2.73
759 760 3.131577 TGTGTCACGGACAAGAAAGTACT 59.868 43.478 8.09 0.00 44.49 2.73
760 761 4.338964 TGTGTCACGGACAAGAAAGTACTA 59.661 41.667 8.09 0.00 44.49 1.82
761 762 4.916249 GTGTCACGGACAAGAAAGTACTAG 59.084 45.833 8.09 0.00 44.49 2.57
762 763 4.581824 TGTCACGGACAAGAAAGTACTAGT 59.418 41.667 0.00 0.00 39.78 2.57
763 764 4.916249 GTCACGGACAAGAAAGTACTAGTG 59.084 45.833 5.39 0.00 32.09 2.74
783 784 3.927142 GTGGAACTCATACTTCTGTTCGG 59.073 47.826 0.00 0.00 39.50 4.30
784 785 3.056107 TGGAACTCATACTTCTGTTCGGG 60.056 47.826 0.00 0.00 39.50 5.14
788 789 1.829222 TCATACTTCTGTTCGGGGGAC 59.171 52.381 0.00 0.00 0.00 4.46
802 803 5.502089 TCGGGGGACAAGAAAGTAAATAA 57.498 39.130 0.00 0.00 0.00 1.40
806 807 6.208007 CGGGGGACAAGAAAGTAAATAAAAGT 59.792 38.462 0.00 0.00 0.00 2.66
808 809 9.251440 GGGGGACAAGAAAGTAAATAAAAGTAT 57.749 33.333 0.00 0.00 0.00 2.12
846 847 0.659427 GTCCGATGTACGATGGACGA 59.341 55.000 12.62 0.00 45.77 4.20
849 850 1.666023 CCGATGTACGATGGACGATGG 60.666 57.143 0.00 0.00 45.77 3.51
860 861 1.348064 GGACGATGGGATGGATGGTA 58.652 55.000 0.00 0.00 0.00 3.25
861 862 1.697432 GGACGATGGGATGGATGGTAA 59.303 52.381 0.00 0.00 0.00 2.85
862 863 2.105821 GGACGATGGGATGGATGGTAAA 59.894 50.000 0.00 0.00 0.00 2.01
863 864 3.434453 GGACGATGGGATGGATGGTAAAA 60.434 47.826 0.00 0.00 0.00 1.52
901 902 6.607735 TTTTTCCTACTGTTCGTCGAAATT 57.392 33.333 9.70 0.00 0.00 1.82
904 905 4.232221 TCCTACTGTTCGTCGAAATTGAC 58.768 43.478 9.70 0.00 35.49 3.18
911 912 4.806775 TGTTCGTCGAAATTGACAGAAGAA 59.193 37.500 9.70 0.00 38.84 2.52
922 923 6.890979 ATTGACAGAAGAAAGAAAAGGAGG 57.109 37.500 0.00 0.00 0.00 4.30
976 977 4.148825 CCTCGCCCTTCTCCACCG 62.149 72.222 0.00 0.00 0.00 4.94
1107 1111 2.506472 GAGGACGGGGAAGATGGC 59.494 66.667 0.00 0.00 0.00 4.40
1197 1210 1.673928 ATGAGGGGGAGGAGGAGGAG 61.674 65.000 0.00 0.00 0.00 3.69
1198 1211 3.039526 AGGGGGAGGAGGAGGAGG 61.040 72.222 0.00 0.00 0.00 4.30
1199 1212 3.036959 GGGGGAGGAGGAGGAGGA 61.037 72.222 0.00 0.00 0.00 3.71
1200 1213 2.612251 GGGGAGGAGGAGGAGGAG 59.388 72.222 0.00 0.00 0.00 3.69
1201 1214 2.123033 GGGAGGAGGAGGAGGAGC 60.123 72.222 0.00 0.00 0.00 4.70
1202 1215 2.693017 GGAGGAGGAGGAGGAGCA 59.307 66.667 0.00 0.00 0.00 4.26
1203 1216 1.457455 GGAGGAGGAGGAGGAGCAG 60.457 68.421 0.00 0.00 0.00 4.24
1204 1217 1.457455 GAGGAGGAGGAGGAGCAGG 60.457 68.421 0.00 0.00 0.00 4.85
1205 1218 1.938596 AGGAGGAGGAGGAGCAGGA 60.939 63.158 0.00 0.00 0.00 3.86
1206 1219 1.457455 GGAGGAGGAGGAGCAGGAG 60.457 68.421 0.00 0.00 0.00 3.69
1207 1220 1.457455 GAGGAGGAGGAGCAGGAGG 60.457 68.421 0.00 0.00 0.00 4.30
1369 1382 2.892425 GGTGAGGCCGAATCGCTG 60.892 66.667 0.00 0.00 0.00 5.18
1370 1383 3.567797 GTGAGGCCGAATCGCTGC 61.568 66.667 0.00 0.00 0.00 5.25
1405 1418 2.286872 GTCTGCGTCTGCTAGGTAGTA 58.713 52.381 0.00 0.00 43.34 1.82
1406 1419 2.031930 GTCTGCGTCTGCTAGGTAGTAC 59.968 54.545 0.00 0.00 43.34 2.73
1418 1432 5.994887 CTAGGTAGTACTAGCTGTCACAG 57.005 47.826 34.32 23.17 43.03 3.66
1454 1468 4.496840 CGTGGGTGTTTCTTTCCAAGTAAC 60.497 45.833 0.43 0.43 38.71 2.50
1482 1497 1.259609 CTGGGCTGCAAGAAAATGGA 58.740 50.000 0.50 0.00 34.07 3.41
1496 1511 8.275632 GCAAGAAAATGGAAACTTACAATGTTC 58.724 33.333 0.00 0.00 0.00 3.18
1505 1520 7.171337 TGGAAACTTACAATGTTCTAACGGTAC 59.829 37.037 0.00 0.00 0.00 3.34
1509 1524 8.115490 ACTTACAATGTTCTAACGGTACTACT 57.885 34.615 0.00 0.00 0.00 2.57
1510 1525 9.231297 ACTTACAATGTTCTAACGGTACTACTA 57.769 33.333 0.00 0.00 0.00 1.82
1511 1526 9.495754 CTTACAATGTTCTAACGGTACTACTAC 57.504 37.037 0.00 0.00 0.00 2.73
1514 1529 7.972277 ACAATGTTCTAACGGTACTACTACATG 59.028 37.037 0.00 0.00 0.00 3.21
1516 1531 7.870509 TGTTCTAACGGTACTACTACATGAT 57.129 36.000 0.00 0.00 0.00 2.45
1518 1533 8.186163 TGTTCTAACGGTACTACTACATGATTG 58.814 37.037 0.00 0.00 0.00 2.67
1528 1543 4.801147 ACTACATGATTGCACATTAGCG 57.199 40.909 0.00 0.00 37.31 4.26
1530 1545 1.066002 ACATGATTGCACATTAGCGCC 59.934 47.619 2.29 0.00 37.31 6.53
1539 1554 0.810031 ACATTAGCGCCATGGTCGAC 60.810 55.000 26.00 7.13 0.00 4.20
1542 1557 2.877360 TTAGCGCCATGGTCGACGTC 62.877 60.000 26.00 5.18 0.00 4.34
1554 1569 1.193874 GTCGACGTCGCCTTGAATTTT 59.806 47.619 32.19 0.00 39.60 1.82
1555 1570 1.193650 TCGACGTCGCCTTGAATTTTG 59.806 47.619 32.19 2.37 39.60 2.44
1556 1571 1.193650 CGACGTCGCCTTGAATTTTGA 59.806 47.619 26.59 0.00 0.00 2.69
1557 1572 2.571206 GACGTCGCCTTGAATTTTGAC 58.429 47.619 0.00 0.00 0.00 3.18
1560 1575 1.533731 GTCGCCTTGAATTTTGACGGA 59.466 47.619 0.00 0.00 0.00 4.69
1580 1595 0.033796 CCATGGCTGGTTCCTCATGT 60.034 55.000 0.00 0.00 37.79 3.21
1587 1602 3.209410 GCTGGTTCCTCATGTAATCCTG 58.791 50.000 0.00 0.00 0.00 3.86
1603 1618 6.989169 TGTAATCCTGGTTTTTGTTTCCAATG 59.011 34.615 0.00 0.00 0.00 2.82
1607 1622 4.443315 CCTGGTTTTTGTTTCCAATGCTCT 60.443 41.667 0.00 0.00 0.00 4.09
1608 1623 4.440880 TGGTTTTTGTTTCCAATGCTCTG 58.559 39.130 0.00 0.00 0.00 3.35
1614 1629 3.499338 TGTTTCCAATGCTCTGTGGATT 58.501 40.909 0.00 0.00 43.42 3.01
1615 1630 3.507233 TGTTTCCAATGCTCTGTGGATTC 59.493 43.478 0.00 0.00 43.42 2.52
1617 1632 1.019673 CCAATGCTCTGTGGATTCGG 58.980 55.000 0.00 0.00 37.03 4.30
1621 1636 0.320683 TGCTCTGTGGATTCGGTGTG 60.321 55.000 0.00 0.00 0.00 3.82
1622 1637 1.639298 GCTCTGTGGATTCGGTGTGC 61.639 60.000 0.00 0.00 0.00 4.57
1628 1643 0.392863 TGGATTCGGTGTGCAGATGG 60.393 55.000 0.00 0.00 0.00 3.51
1831 1909 4.202141 CCAATCACTGTCCAATGTGTTGTT 60.202 41.667 0.00 0.00 35.82 2.83
1915 1993 3.365969 CGGAGGTTGCTGTTCCAAATAAC 60.366 47.826 0.00 0.00 0.00 1.89
1953 2032 3.488553 GGGTTTGTTTCTCCACTTTGTCG 60.489 47.826 0.00 0.00 0.00 4.35
2267 2348 1.824230 TGCATGCCCCACATTCTAAAC 59.176 47.619 16.68 0.00 36.64 2.01
2271 2352 3.080300 TGCCCCACATTCTAAACGATT 57.920 42.857 0.00 0.00 0.00 3.34
2291 2372 7.589395 ACGATTAAAATTGTGTCAAGTGCATA 58.411 30.769 0.00 0.00 31.86 3.14
2430 2511 6.374053 TCGATTGTTCCTGCATCAGAAAATTA 59.626 34.615 0.00 0.00 32.44 1.40
2435 2516 7.315142 TGTTCCTGCATCAGAAAATTAATGTC 58.685 34.615 0.00 0.00 32.44 3.06
2456 2537 5.163864 TGTCGCAATGATCAATAGTTGTCAC 60.164 40.000 0.00 2.00 0.00 3.67
2476 2557 3.931578 ACACTTGTGAGAGACTTATGCC 58.068 45.455 7.83 0.00 0.00 4.40
2516 2597 1.081892 CCTTGCAGAATCACAGGTCG 58.918 55.000 0.00 0.00 0.00 4.79
2538 2619 3.550842 GGCAGATGTTGGTGTCTCAAAAC 60.551 47.826 0.00 0.00 0.00 2.43
2808 2889 9.607988 TGTACTACATGTTTTACTGATAATGGG 57.392 33.333 2.30 0.00 0.00 4.00
2814 2895 7.669722 ACATGTTTTACTGATAATGGGTGTCTT 59.330 33.333 0.00 0.00 0.00 3.01
2866 2947 9.959749 TGGTCATTTTAGTTTTAGTAAAAGCAG 57.040 29.630 8.33 0.00 36.69 4.24
2930 3014 4.231273 TGGCCCAGCTTCTGTTAGATATA 58.769 43.478 0.00 0.00 0.00 0.86
2936 3020 9.103861 GCCCAGCTTCTGTTAGATATATAAATC 57.896 37.037 0.00 0.00 0.00 2.17
3059 3153 9.543783 AGACTCGTAATACCCATCTTATTTTTC 57.456 33.333 0.00 0.00 0.00 2.29
3081 3175 5.305585 TCGTGATTAAGGAAGCTGAAACTT 58.694 37.500 0.00 0.00 0.00 2.66
3723 3896 0.323302 TCCAGCCATGAAGCACGTAA 59.677 50.000 0.00 0.00 34.23 3.18
3880 4053 3.362693 GGTTCTTCTGTTTTACTGTCGCG 60.363 47.826 0.00 0.00 0.00 5.87
3896 4069 5.626955 ACTGTCGCGTCTAAGTTAGTTTTAC 59.373 40.000 5.77 0.18 0.00 2.01
4008 4182 3.138304 TGACCTTCCAATCTTCAACACG 58.862 45.455 0.00 0.00 0.00 4.49
4037 4211 7.791949 TGTTTTGTATTTTGAATCGGCAAATC 58.208 30.769 0.00 0.00 37.57 2.17
4055 4229 5.509501 GCAAATCAGGTGAACCAATTTCAGA 60.510 40.000 1.62 0.00 45.23 3.27
4065 4239 8.253113 GGTGAACCAATTTCAGATAATGACATT 58.747 33.333 5.87 5.87 45.23 2.71
4138 4312 2.347755 CAGCACATGACTCTGATTCACG 59.652 50.000 0.00 0.00 0.00 4.35
4216 4390 7.910441 ATTTTGATACCCTTTGCAAGATTTG 57.090 32.000 0.00 0.00 0.00 2.32
4387 4561 8.178124 AGAAAGGTTCTTTCAGCTTCTGCTATT 61.178 37.037 18.75 0.00 42.06 1.73
4452 4626 3.383185 GTGACACAGGGATGGTTCAAAAA 59.617 43.478 0.00 0.00 0.00 1.94
4506 4680 0.174845 TCGATTGGTGTTCGCCTAGG 59.825 55.000 3.67 3.67 36.56 3.02
4509 4683 0.252197 ATTGGTGTTCGCCTAGGACC 59.748 55.000 14.75 11.46 0.00 4.46
4608 4785 7.230913 GCTACTACTAGAGGATGATAACCAACA 59.769 40.741 0.00 0.00 0.00 3.33
4609 4786 7.349412 ACTACTAGAGGATGATAACCAACAC 57.651 40.000 0.00 0.00 0.00 3.32
4733 4910 1.747709 AGCGTACCTATCACAGACGT 58.252 50.000 0.00 0.00 35.97 4.34
4741 4918 2.476352 CCTATCACAGACGTCGACACAG 60.476 54.545 17.16 8.33 0.00 3.66
4753 4930 1.302033 GACACAGTCTGGTGCAGGG 60.302 63.158 4.53 0.00 42.55 4.45
5013 5190 0.683504 AGGTATGCGGGAAGTCGAGT 60.684 55.000 0.00 0.00 0.00 4.18
5158 5335 5.279506 CCTCCTAATTATGCGGTATGACTGT 60.280 44.000 0.00 0.00 0.00 3.55
5271 5603 9.753674 TTTATTTCTTACCATGGAAGTGAGAAT 57.246 29.630 21.47 16.00 38.95 2.40
5387 5744 2.046285 GGCATAGTGGTGGGCACAC 61.046 63.158 11.74 11.74 46.97 3.82
5391 5748 1.831106 CATAGTGGTGGGCACACTCTA 59.169 52.381 20.52 20.39 45.50 2.43
5392 5749 2.018355 TAGTGGTGGGCACACTCTAA 57.982 50.000 20.52 0.00 45.50 2.10
5393 5750 0.687354 AGTGGTGGGCACACTCTAAG 59.313 55.000 20.52 0.00 45.50 2.18
5394 5751 0.685097 GTGGTGGGCACACTCTAAGA 59.315 55.000 20.52 0.00 46.85 2.10
5395 5752 1.279271 GTGGTGGGCACACTCTAAGAT 59.721 52.381 20.52 0.00 46.85 2.40
5396 5753 1.278985 TGGTGGGCACACTCTAAGATG 59.721 52.381 20.52 0.00 46.85 2.90
5397 5754 1.555075 GGTGGGCACACTCTAAGATGA 59.445 52.381 20.52 0.00 46.85 2.92
5398 5755 2.622436 GTGGGCACACTCTAAGATGAC 58.378 52.381 13.14 0.00 44.29 3.06
5399 5756 2.028112 GTGGGCACACTCTAAGATGACA 60.028 50.000 13.14 0.00 44.29 3.58
5400 5757 2.028112 TGGGCACACTCTAAGATGACAC 60.028 50.000 0.00 0.00 0.00 3.67
5401 5758 2.028112 GGGCACACTCTAAGATGACACA 60.028 50.000 0.00 0.00 0.00 3.72
5402 5759 2.996621 GGCACACTCTAAGATGACACAC 59.003 50.000 0.00 0.00 0.00 3.82
5403 5760 3.554960 GGCACACTCTAAGATGACACACA 60.555 47.826 0.00 0.00 0.00 3.72
5404 5761 4.248859 GCACACTCTAAGATGACACACAT 58.751 43.478 0.00 0.00 42.47 3.21
5405 5762 4.092529 GCACACTCTAAGATGACACACATG 59.907 45.833 0.00 0.00 39.56 3.21
5406 5763 4.092529 CACACTCTAAGATGACACACATGC 59.907 45.833 0.00 0.00 39.56 4.06
5407 5764 4.020751 ACACTCTAAGATGACACACATGCT 60.021 41.667 0.00 0.00 39.56 3.79
5408 5765 4.934001 CACTCTAAGATGACACACATGCTT 59.066 41.667 0.00 0.00 39.56 3.91
5409 5766 5.410746 CACTCTAAGATGACACACATGCTTT 59.589 40.000 0.00 0.00 39.56 3.51
5410 5767 5.641209 ACTCTAAGATGACACACATGCTTTC 59.359 40.000 0.00 0.00 39.56 2.62
5411 5768 4.937620 TCTAAGATGACACACATGCTTTCC 59.062 41.667 0.00 0.00 39.56 3.13
5502 5859 7.701539 TTGCCTCTTTTTATTAAGATGCTGA 57.298 32.000 12.53 2.56 42.60 4.26
5505 5862 9.578576 TGCCTCTTTTTATTAAGATGCTGATAT 57.421 29.630 12.53 0.00 42.60 1.63
5609 5976 1.616994 GGTAAGCCTGGCAATTCCACT 60.617 52.381 22.65 0.00 40.72 4.00
5619 5986 3.255642 TGGCAATTCCACTCTTAGTTTGC 59.744 43.478 5.89 5.89 40.72 3.68
5671 6038 1.745232 AAATTTGCCATCCTCGCGTA 58.255 45.000 5.77 0.00 0.00 4.42
5730 6097 4.789012 TTCCGTTCTGTTATTACGTCCT 57.211 40.909 0.00 0.00 33.68 3.85
5810 6177 9.077885 TCTTGTTTCCTTTTATTCTACAAGCAT 57.922 29.630 0.00 0.00 40.26 3.79
5840 6207 8.803235 TCTCTGCATTTATACATCGTAATAGGT 58.197 33.333 0.00 0.00 0.00 3.08
5948 6350 7.761249 AGCTTATTAAAAATGTCTGGTTGATGC 59.239 33.333 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.489700 TGTTTTCATCTACTCAATGCAAGGAA 59.510 34.615 0.00 0.00 0.00 3.36
2 3 6.258230 TGTTTTCATCTACTCAATGCAAGG 57.742 37.500 0.00 0.00 0.00 3.61
9 10 9.677567 GTGCTTAATTTGTTTTCATCTACTCAA 57.322 29.630 0.00 0.00 0.00 3.02
10 11 8.015087 CGTGCTTAATTTGTTTTCATCTACTCA 58.985 33.333 0.00 0.00 0.00 3.41
11 12 8.227791 TCGTGCTTAATTTGTTTTCATCTACTC 58.772 33.333 0.00 0.00 0.00 2.59
12 13 8.094798 TCGTGCTTAATTTGTTTTCATCTACT 57.905 30.769 0.00 0.00 0.00 2.57
13 14 8.722342 TTCGTGCTTAATTTGTTTTCATCTAC 57.278 30.769 0.00 0.00 0.00 2.59
14 15 8.779303 TCTTCGTGCTTAATTTGTTTTCATCTA 58.221 29.630 0.00 0.00 0.00 1.98
15 16 7.648142 TCTTCGTGCTTAATTTGTTTTCATCT 58.352 30.769 0.00 0.00 0.00 2.90
16 17 7.851822 TCTTCGTGCTTAATTTGTTTTCATC 57.148 32.000 0.00 0.00 0.00 2.92
17 18 8.641499 TTTCTTCGTGCTTAATTTGTTTTCAT 57.359 26.923 0.00 0.00 0.00 2.57
18 19 7.757624 ACTTTCTTCGTGCTTAATTTGTTTTCA 59.242 29.630 0.00 0.00 0.00 2.69
19 20 8.115491 ACTTTCTTCGTGCTTAATTTGTTTTC 57.885 30.769 0.00 0.00 0.00 2.29
20 21 8.474006 AACTTTCTTCGTGCTTAATTTGTTTT 57.526 26.923 0.00 0.00 0.00 2.43
21 22 9.744468 ATAACTTTCTTCGTGCTTAATTTGTTT 57.256 25.926 0.00 0.00 0.00 2.83
26 27 9.227777 ACCTTATAACTTTCTTCGTGCTTAATT 57.772 29.630 0.00 0.00 0.00 1.40
27 28 8.788325 ACCTTATAACTTTCTTCGTGCTTAAT 57.212 30.769 0.00 0.00 0.00 1.40
28 29 8.500773 CAACCTTATAACTTTCTTCGTGCTTAA 58.499 33.333 0.00 0.00 0.00 1.85
29 30 7.658575 ACAACCTTATAACTTTCTTCGTGCTTA 59.341 33.333 0.00 0.00 0.00 3.09
30 31 6.485648 ACAACCTTATAACTTTCTTCGTGCTT 59.514 34.615 0.00 0.00 0.00 3.91
31 32 5.995897 ACAACCTTATAACTTTCTTCGTGCT 59.004 36.000 0.00 0.00 0.00 4.40
32 33 6.237313 ACAACCTTATAACTTTCTTCGTGC 57.763 37.500 0.00 0.00 0.00 5.34
33 34 7.857569 TGAACAACCTTATAACTTTCTTCGTG 58.142 34.615 0.00 0.00 0.00 4.35
34 35 8.504005 CATGAACAACCTTATAACTTTCTTCGT 58.496 33.333 0.00 0.00 0.00 3.85
35 36 8.504005 ACATGAACAACCTTATAACTTTCTTCG 58.496 33.333 0.00 0.00 0.00 3.79
36 37 9.612620 CACATGAACAACCTTATAACTTTCTTC 57.387 33.333 0.00 0.00 0.00 2.87
37 38 9.131791 ACACATGAACAACCTTATAACTTTCTT 57.868 29.630 0.00 0.00 0.00 2.52
38 39 8.691661 ACACATGAACAACCTTATAACTTTCT 57.308 30.769 0.00 0.00 0.00 2.52
39 40 9.180678 CAACACATGAACAACCTTATAACTTTC 57.819 33.333 0.00 0.00 0.00 2.62
40 41 8.908903 TCAACACATGAACAACCTTATAACTTT 58.091 29.630 0.00 0.00 34.30 2.66
41 42 8.458573 TCAACACATGAACAACCTTATAACTT 57.541 30.769 0.00 0.00 34.30 2.66
42 43 7.308589 GCTCAACACATGAACAACCTTATAACT 60.309 37.037 0.00 0.00 37.67 2.24
43 44 6.801862 GCTCAACACATGAACAACCTTATAAC 59.198 38.462 0.00 0.00 37.67 1.89
44 45 6.072175 GGCTCAACACATGAACAACCTTATAA 60.072 38.462 0.00 0.00 37.67 0.98
45 46 5.414454 GGCTCAACACATGAACAACCTTATA 59.586 40.000 0.00 0.00 37.67 0.98
46 47 4.218417 GGCTCAACACATGAACAACCTTAT 59.782 41.667 0.00 0.00 37.67 1.73
47 48 3.568007 GGCTCAACACATGAACAACCTTA 59.432 43.478 0.00 0.00 37.67 2.69
48 49 2.362077 GGCTCAACACATGAACAACCTT 59.638 45.455 0.00 0.00 37.67 3.50
49 50 1.956477 GGCTCAACACATGAACAACCT 59.044 47.619 0.00 0.00 37.67 3.50
50 51 1.000274 GGGCTCAACACATGAACAACC 60.000 52.381 0.00 0.00 37.67 3.77
51 52 1.956477 AGGGCTCAACACATGAACAAC 59.044 47.619 0.00 0.00 37.67 3.32
52 53 1.955778 CAGGGCTCAACACATGAACAA 59.044 47.619 0.00 0.00 37.67 2.83
53 54 1.133823 ACAGGGCTCAACACATGAACA 60.134 47.619 0.00 0.00 37.67 3.18
54 55 1.267806 CACAGGGCTCAACACATGAAC 59.732 52.381 0.00 0.00 37.67 3.18
55 56 1.608055 CACAGGGCTCAACACATGAA 58.392 50.000 0.00 0.00 37.67 2.57
56 57 0.250858 CCACAGGGCTCAACACATGA 60.251 55.000 0.00 0.00 36.38 3.07
57 58 1.246056 CCCACAGGGCTCAACACATG 61.246 60.000 0.00 0.00 35.35 3.21
58 59 1.075482 CCCACAGGGCTCAACACAT 59.925 57.895 0.00 0.00 35.35 3.21
59 60 2.515398 CCCACAGGGCTCAACACA 59.485 61.111 0.00 0.00 35.35 3.72
69 70 2.959484 ATGGTCGTCAGCCCACAGG 61.959 63.158 0.00 0.00 32.49 4.00
70 71 1.742880 CATGGTCGTCAGCCCACAG 60.743 63.158 0.00 0.00 32.49 3.66
71 72 2.347114 CATGGTCGTCAGCCCACA 59.653 61.111 0.00 0.00 32.49 4.17
72 73 1.741770 GACATGGTCGTCAGCCCAC 60.742 63.158 0.00 0.00 35.88 4.61
73 74 1.888436 GAGACATGGTCGTCAGCCCA 61.888 60.000 0.00 0.00 38.43 5.36
74 75 1.153549 GAGACATGGTCGTCAGCCC 60.154 63.158 0.00 0.00 38.43 5.19
75 76 0.459237 CAGAGACATGGTCGTCAGCC 60.459 60.000 0.00 0.00 38.43 4.85
76 77 1.080995 GCAGAGACATGGTCGTCAGC 61.081 60.000 0.00 0.00 38.43 4.26
77 78 0.529833 AGCAGAGACATGGTCGTCAG 59.470 55.000 0.00 0.00 38.43 3.51
78 79 0.969149 AAGCAGAGACATGGTCGTCA 59.031 50.000 0.00 0.00 38.43 4.35
79 80 1.067565 TGAAGCAGAGACATGGTCGTC 60.068 52.381 0.00 0.00 37.67 4.20
80 81 0.969149 TGAAGCAGAGACATGGTCGT 59.031 50.000 0.00 0.00 37.67 4.34
81 82 1.998315 CTTGAAGCAGAGACATGGTCG 59.002 52.381 0.00 0.00 37.67 4.79
82 83 2.354259 CCTTGAAGCAGAGACATGGTC 58.646 52.381 0.00 0.00 0.00 4.02
83 84 1.004044 CCCTTGAAGCAGAGACATGGT 59.996 52.381 0.00 0.00 0.00 3.55
84 85 1.004044 ACCCTTGAAGCAGAGACATGG 59.996 52.381 0.00 0.00 0.00 3.66
85 86 2.082231 CACCCTTGAAGCAGAGACATG 58.918 52.381 0.00 0.00 0.00 3.21
86 87 1.004044 CCACCCTTGAAGCAGAGACAT 59.996 52.381 0.00 0.00 0.00 3.06
87 88 0.397941 CCACCCTTGAAGCAGAGACA 59.602 55.000 0.00 0.00 0.00 3.41
88 89 0.322008 CCCACCCTTGAAGCAGAGAC 60.322 60.000 0.00 0.00 0.00 3.36
89 90 2.069776 CCCACCCTTGAAGCAGAGA 58.930 57.895 0.00 0.00 0.00 3.10
90 91 1.676967 GCCCACCCTTGAAGCAGAG 60.677 63.158 0.00 0.00 0.00 3.35
91 92 2.436109 GCCCACCCTTGAAGCAGA 59.564 61.111 0.00 0.00 0.00 4.26
92 93 2.115910 TGCCCACCCTTGAAGCAG 59.884 61.111 0.00 0.00 30.79 4.24
93 94 2.203480 GTGCCCACCCTTGAAGCA 60.203 61.111 0.00 0.00 31.57 3.91
94 95 1.398958 TTTGTGCCCACCCTTGAAGC 61.399 55.000 0.00 0.00 0.00 3.86
95 96 1.118838 TTTTGTGCCCACCCTTGAAG 58.881 50.000 0.00 0.00 0.00 3.02
96 97 1.691434 GATTTTGTGCCCACCCTTGAA 59.309 47.619 0.00 0.00 0.00 2.69
97 98 1.337118 GATTTTGTGCCCACCCTTGA 58.663 50.000 0.00 0.00 0.00 3.02
98 99 1.001181 CTGATTTTGTGCCCACCCTTG 59.999 52.381 0.00 0.00 0.00 3.61
99 100 1.341080 CTGATTTTGTGCCCACCCTT 58.659 50.000 0.00 0.00 0.00 3.95
100 101 0.542702 CCTGATTTTGTGCCCACCCT 60.543 55.000 0.00 0.00 0.00 4.34
101 102 0.541764 TCCTGATTTTGTGCCCACCC 60.542 55.000 0.00 0.00 0.00 4.61
102 103 1.337118 TTCCTGATTTTGTGCCCACC 58.663 50.000 0.00 0.00 0.00 4.61
103 104 3.467374 TTTTCCTGATTTTGTGCCCAC 57.533 42.857 0.00 0.00 0.00 4.61
124 125 3.009695 TGGGTCGTGGAGGACATATTTTT 59.990 43.478 2.21 0.00 38.70 1.94
125 126 2.574369 TGGGTCGTGGAGGACATATTTT 59.426 45.455 2.21 0.00 38.70 1.82
126 127 2.093128 GTGGGTCGTGGAGGACATATTT 60.093 50.000 2.21 0.00 38.70 1.40
127 128 1.485066 GTGGGTCGTGGAGGACATATT 59.515 52.381 2.21 0.00 38.70 1.28
128 129 1.120530 GTGGGTCGTGGAGGACATAT 58.879 55.000 2.21 0.00 38.70 1.78
129 130 0.040646 AGTGGGTCGTGGAGGACATA 59.959 55.000 2.21 0.00 38.70 2.29
130 131 0.836400 AAGTGGGTCGTGGAGGACAT 60.836 55.000 2.21 0.00 38.70 3.06
131 132 1.052124 AAAGTGGGTCGTGGAGGACA 61.052 55.000 2.21 0.00 38.70 4.02
132 133 0.108019 AAAAGTGGGTCGTGGAGGAC 59.892 55.000 0.00 0.00 36.18 3.85
133 134 0.841289 AAAAAGTGGGTCGTGGAGGA 59.159 50.000 0.00 0.00 0.00 3.71
134 135 1.235724 GAAAAAGTGGGTCGTGGAGG 58.764 55.000 0.00 0.00 0.00 4.30
135 136 1.202770 AGGAAAAAGTGGGTCGTGGAG 60.203 52.381 0.00 0.00 0.00 3.86
136 137 0.841289 AGGAAAAAGTGGGTCGTGGA 59.159 50.000 0.00 0.00 0.00 4.02
137 138 1.235724 GAGGAAAAAGTGGGTCGTGG 58.764 55.000 0.00 0.00 0.00 4.94
138 139 1.235724 GGAGGAAAAAGTGGGTCGTG 58.764 55.000 0.00 0.00 0.00 4.35
139 140 0.109913 GGGAGGAAAAAGTGGGTCGT 59.890 55.000 0.00 0.00 0.00 4.34
140 141 0.400594 AGGGAGGAAAAAGTGGGTCG 59.599 55.000 0.00 0.00 0.00 4.79
141 142 3.801307 TTAGGGAGGAAAAAGTGGGTC 57.199 47.619 0.00 0.00 0.00 4.46
142 143 3.465966 ACTTTAGGGAGGAAAAAGTGGGT 59.534 43.478 0.00 0.00 40.85 4.51
143 144 4.114015 ACTTTAGGGAGGAAAAAGTGGG 57.886 45.455 0.00 0.00 40.85 4.61
144 145 6.479972 AAAACTTTAGGGAGGAAAAAGTGG 57.520 37.500 0.85 0.00 41.36 4.00
145 146 7.327975 ACAAAAACTTTAGGGAGGAAAAAGTG 58.672 34.615 0.85 0.00 41.36 3.16
146 147 7.490657 ACAAAAACTTTAGGGAGGAAAAAGT 57.509 32.000 0.00 0.00 43.43 2.66
147 148 8.786826 AAACAAAAACTTTAGGGAGGAAAAAG 57.213 30.769 0.00 0.00 36.51 2.27
148 149 8.598916 AGAAACAAAAACTTTAGGGAGGAAAAA 58.401 29.630 0.00 0.00 0.00 1.94
149 150 8.141298 AGAAACAAAAACTTTAGGGAGGAAAA 57.859 30.769 0.00 0.00 0.00 2.29
150 151 7.727578 AGAAACAAAAACTTTAGGGAGGAAA 57.272 32.000 0.00 0.00 0.00 3.13
151 152 9.074576 GATAGAAACAAAAACTTTAGGGAGGAA 57.925 33.333 0.00 0.00 0.00 3.36
152 153 7.389607 CGATAGAAACAAAAACTTTAGGGAGGA 59.610 37.037 0.00 0.00 39.76 3.71
153 154 7.389607 TCGATAGAAACAAAAACTTTAGGGAGG 59.610 37.037 0.00 0.00 46.15 4.30
154 155 8.319143 TCGATAGAAACAAAAACTTTAGGGAG 57.681 34.615 0.00 0.00 46.15 4.30
176 177 9.884636 TCAATATAAAGAGACCTTCAAATTCGA 57.115 29.630 0.00 0.00 0.00 3.71
218 219 2.414750 CCACAGGTTGGTTCACACC 58.585 57.895 0.00 0.00 44.56 4.16
246 247 1.072648 TCAAGACTTAAACCCCGGTGG 59.927 52.381 0.00 3.72 41.37 4.61
247 248 2.554370 TCAAGACTTAAACCCCGGTG 57.446 50.000 0.00 0.00 0.00 4.94
248 249 2.878526 GCATCAAGACTTAAACCCCGGT 60.879 50.000 0.00 0.00 0.00 5.28
249 250 1.743394 GCATCAAGACTTAAACCCCGG 59.257 52.381 0.00 0.00 0.00 5.73
250 251 2.678336 GAGCATCAAGACTTAAACCCCG 59.322 50.000 0.00 0.00 33.17 5.73
251 252 2.678336 CGAGCATCAAGACTTAAACCCC 59.322 50.000 0.00 0.00 33.17 4.95
252 253 2.096013 GCGAGCATCAAGACTTAAACCC 59.904 50.000 0.00 0.00 33.17 4.11
253 254 2.742053 TGCGAGCATCAAGACTTAAACC 59.258 45.455 0.00 0.00 33.17 3.27
254 255 4.151798 GTTGCGAGCATCAAGACTTAAAC 58.848 43.478 0.00 0.00 33.17 2.01
255 256 3.812609 TGTTGCGAGCATCAAGACTTAAA 59.187 39.130 6.39 0.00 33.17 1.52
256 257 3.398406 TGTTGCGAGCATCAAGACTTAA 58.602 40.909 6.39 0.00 33.17 1.85
257 258 3.038788 TGTTGCGAGCATCAAGACTTA 57.961 42.857 6.39 0.00 33.17 2.24
258 259 1.882912 TGTTGCGAGCATCAAGACTT 58.117 45.000 6.39 0.00 33.17 3.01
259 260 2.105006 ATGTTGCGAGCATCAAGACT 57.895 45.000 12.09 0.00 33.17 3.24
260 261 2.907910 AATGTTGCGAGCATCAAGAC 57.092 45.000 12.09 1.91 33.17 3.01
261 262 2.677836 GGTAATGTTGCGAGCATCAAGA 59.322 45.455 12.09 2.08 33.17 3.02
262 263 2.419673 TGGTAATGTTGCGAGCATCAAG 59.580 45.455 12.09 0.00 33.17 3.02
263 264 2.161410 GTGGTAATGTTGCGAGCATCAA 59.839 45.455 12.09 0.00 33.17 2.57
264 265 1.737236 GTGGTAATGTTGCGAGCATCA 59.263 47.619 10.71 10.71 33.17 3.07
265 266 1.064060 GGTGGTAATGTTGCGAGCATC 59.936 52.381 0.00 0.00 0.00 3.91
266 267 1.094785 GGTGGTAATGTTGCGAGCAT 58.905 50.000 0.00 0.00 0.00 3.79
267 268 0.036164 AGGTGGTAATGTTGCGAGCA 59.964 50.000 0.00 0.00 0.00 4.26
268 269 0.447801 CAGGTGGTAATGTTGCGAGC 59.552 55.000 0.00 0.00 0.00 5.03
269 270 2.093306 TCAGGTGGTAATGTTGCGAG 57.907 50.000 0.00 0.00 0.00 5.03
270 271 2.746904 CAATCAGGTGGTAATGTTGCGA 59.253 45.455 0.00 0.00 0.00 5.10
271 272 2.159393 CCAATCAGGTGGTAATGTTGCG 60.159 50.000 0.00 0.00 33.63 4.85
272 273 3.508744 CCAATCAGGTGGTAATGTTGC 57.491 47.619 0.00 0.00 33.63 4.17
284 285 7.763985 GGTGGAATTTATTGTAAACCAATCAGG 59.236 37.037 0.00 0.00 42.81 3.86
285 286 7.487829 CGGTGGAATTTATTGTAAACCAATCAG 59.512 37.037 0.00 0.00 42.81 2.90
286 287 7.176865 TCGGTGGAATTTATTGTAAACCAATCA 59.823 33.333 0.00 0.00 42.81 2.57
287 288 7.540299 TCGGTGGAATTTATTGTAAACCAATC 58.460 34.615 0.00 0.00 42.81 2.67
288 289 7.469537 TCGGTGGAATTTATTGTAAACCAAT 57.530 32.000 0.00 0.00 45.68 3.16
289 290 6.896021 TCGGTGGAATTTATTGTAAACCAA 57.104 33.333 0.00 0.00 37.49 3.67
290 291 7.469537 AATCGGTGGAATTTATTGTAAACCA 57.530 32.000 0.00 0.00 0.00 3.67
302 303 9.231297 CCAGACAATATATAAATCGGTGGAATT 57.769 33.333 0.00 0.00 0.00 2.17
303 304 8.383175 ACCAGACAATATATAAATCGGTGGAAT 58.617 33.333 0.00 0.00 0.00 3.01
304 305 7.659799 CACCAGACAATATATAAATCGGTGGAA 59.340 37.037 12.49 0.00 37.20 3.53
305 306 7.158697 CACCAGACAATATATAAATCGGTGGA 58.841 38.462 12.49 0.00 37.20 4.02
306 307 6.934645 ACACCAGACAATATATAAATCGGTGG 59.065 38.462 19.62 13.81 43.49 4.61
307 308 7.117812 GGACACCAGACAATATATAAATCGGTG 59.882 40.741 16.31 16.31 44.49 4.94
308 309 7.159372 GGACACCAGACAATATATAAATCGGT 58.841 38.462 0.00 0.00 0.00 4.69
309 310 6.310467 CGGACACCAGACAATATATAAATCGG 59.690 42.308 0.00 0.00 0.00 4.18
310 311 7.088272 TCGGACACCAGACAATATATAAATCG 58.912 38.462 0.00 0.00 0.00 3.34
311 312 8.827177 TTCGGACACCAGACAATATATAAATC 57.173 34.615 0.00 0.00 0.00 2.17
312 313 9.219603 CATTCGGACACCAGACAATATATAAAT 57.780 33.333 0.00 0.00 0.00 1.40
313 314 7.172532 GCATTCGGACACCAGACAATATATAAA 59.827 37.037 0.00 0.00 0.00 1.40
314 315 6.649141 GCATTCGGACACCAGACAATATATAA 59.351 38.462 0.00 0.00 0.00 0.98
315 316 6.163476 GCATTCGGACACCAGACAATATATA 58.837 40.000 0.00 0.00 0.00 0.86
316 317 4.997395 GCATTCGGACACCAGACAATATAT 59.003 41.667 0.00 0.00 0.00 0.86
317 318 4.377021 GCATTCGGACACCAGACAATATA 58.623 43.478 0.00 0.00 0.00 0.86
318 319 3.206150 GCATTCGGACACCAGACAATAT 58.794 45.455 0.00 0.00 0.00 1.28
319 320 2.627945 GCATTCGGACACCAGACAATA 58.372 47.619 0.00 0.00 0.00 1.90
320 321 1.453155 GCATTCGGACACCAGACAAT 58.547 50.000 0.00 0.00 0.00 2.71
321 322 0.948623 CGCATTCGGACACCAGACAA 60.949 55.000 0.00 0.00 0.00 3.18
322 323 1.374125 CGCATTCGGACACCAGACA 60.374 57.895 0.00 0.00 0.00 3.41
323 324 0.460284 ATCGCATTCGGACACCAGAC 60.460 55.000 0.00 0.00 36.13 3.51
324 325 0.460109 CATCGCATTCGGACACCAGA 60.460 55.000 0.00 0.00 36.13 3.86
325 326 0.460109 TCATCGCATTCGGACACCAG 60.460 55.000 0.00 0.00 36.13 4.00
326 327 0.036858 TTCATCGCATTCGGACACCA 60.037 50.000 0.00 0.00 36.13 4.17
327 328 0.652592 CTTCATCGCATTCGGACACC 59.347 55.000 0.00 0.00 36.13 4.16
328 329 0.652592 CCTTCATCGCATTCGGACAC 59.347 55.000 0.00 0.00 36.13 3.67
329 330 0.534873 TCCTTCATCGCATTCGGACA 59.465 50.000 0.00 0.00 36.13 4.02
330 331 0.931005 GTCCTTCATCGCATTCGGAC 59.069 55.000 0.00 0.00 34.79 4.79
331 332 0.527600 CGTCCTTCATCGCATTCGGA 60.528 55.000 0.00 0.00 36.13 4.55
332 333 1.927210 CGTCCTTCATCGCATTCGG 59.073 57.895 0.00 0.00 36.13 4.30
339 340 1.644786 GGTTTGGGCGTCCTTCATCG 61.645 60.000 7.97 0.00 0.00 3.84
340 341 1.313091 GGGTTTGGGCGTCCTTCATC 61.313 60.000 7.97 0.00 0.00 2.92
341 342 1.304134 GGGTTTGGGCGTCCTTCAT 60.304 57.895 7.97 0.00 0.00 2.57
342 343 2.114411 GGGTTTGGGCGTCCTTCA 59.886 61.111 7.97 0.00 0.00 3.02
343 344 1.674651 GAGGGTTTGGGCGTCCTTC 60.675 63.158 7.97 0.00 0.00 3.46
344 345 2.434774 GAGGGTTTGGGCGTCCTT 59.565 61.111 7.97 0.00 0.00 3.36
345 346 3.647771 GGAGGGTTTGGGCGTCCT 61.648 66.667 7.97 0.00 0.00 3.85
347 348 3.837570 AACGGAGGGTTTGGGCGTC 62.838 63.158 0.00 0.00 34.41 5.19
348 349 3.881104 AACGGAGGGTTTGGGCGT 61.881 61.111 0.00 0.00 34.41 5.68
349 350 3.361977 CAACGGAGGGTTTGGGCG 61.362 66.667 0.00 0.00 36.49 6.13
350 351 2.989253 CCAACGGAGGGTTTGGGC 60.989 66.667 0.00 0.00 36.49 5.36
351 352 2.989253 GCCAACGGAGGGTTTGGG 60.989 66.667 2.69 0.00 36.49 4.12
352 353 3.361977 CGCCAACGGAGGGTTTGG 61.362 66.667 0.00 0.00 36.49 3.28
353 354 2.593436 ACGCCAACGGAGGGTTTG 60.593 61.111 0.00 0.00 46.04 2.93
354 355 2.593436 CACGCCAACGGAGGGTTT 60.593 61.111 0.00 0.00 46.04 3.27
375 376 0.676184 ATGGAGCGTCACGATATGCT 59.324 50.000 0.00 7.96 44.38 3.79
376 377 0.786581 CATGGAGCGTCACGATATGC 59.213 55.000 0.00 0.00 0.00 3.14
377 378 1.000274 TCCATGGAGCGTCACGATATG 60.000 52.381 11.44 0.00 0.00 1.78
378 379 1.000163 GTCCATGGAGCGTCACGATAT 60.000 52.381 16.81 0.00 0.00 1.63
379 380 0.384309 GTCCATGGAGCGTCACGATA 59.616 55.000 16.81 0.00 0.00 2.92
380 381 1.141881 GTCCATGGAGCGTCACGAT 59.858 57.895 16.81 0.00 0.00 3.73
381 382 2.571757 GTCCATGGAGCGTCACGA 59.428 61.111 16.81 0.00 0.00 4.35
382 383 2.509336 GGTCCATGGAGCGTCACG 60.509 66.667 27.11 0.00 32.85 4.35
383 384 1.153549 GAGGTCCATGGAGCGTCAC 60.154 63.158 32.46 22.23 46.10 3.67
384 385 2.710902 CGAGGTCCATGGAGCGTCA 61.711 63.158 32.46 0.95 46.10 4.35
385 386 2.105128 CGAGGTCCATGGAGCGTC 59.895 66.667 32.46 26.99 46.10 5.19
386 387 2.680352 ACGAGGTCCATGGAGCGT 60.680 61.111 32.46 27.82 46.10 5.07
387 388 2.105128 GACGAGGTCCATGGAGCG 59.895 66.667 32.46 27.24 46.10 5.03
396 397 1.405821 ACATTCTCATCGGACGAGGTC 59.594 52.381 6.27 0.00 0.00 3.85
397 398 1.135139 CACATTCTCATCGGACGAGGT 59.865 52.381 6.27 0.00 0.00 3.85
398 399 1.536922 CCACATTCTCATCGGACGAGG 60.537 57.143 0.77 0.00 0.00 4.63
399 400 1.845266 CCACATTCTCATCGGACGAG 58.155 55.000 0.00 0.00 0.00 4.18
400 401 0.179111 GCCACATTCTCATCGGACGA 60.179 55.000 0.00 0.00 0.00 4.20
401 402 0.460109 TGCCACATTCTCATCGGACG 60.460 55.000 0.00 0.00 0.00 4.79
402 403 1.009829 GTGCCACATTCTCATCGGAC 58.990 55.000 0.00 0.00 0.00 4.79
403 404 0.612744 TGTGCCACATTCTCATCGGA 59.387 50.000 0.00 0.00 0.00 4.55
404 405 1.600957 GATGTGCCACATTCTCATCGG 59.399 52.381 12.36 0.00 39.27 4.18
405 406 1.259770 CGATGTGCCACATTCTCATCG 59.740 52.381 12.36 6.82 45.15 3.84
406 407 2.031314 CACGATGTGCCACATTCTCATC 59.969 50.000 12.36 0.00 39.27 2.92
407 408 2.011947 CACGATGTGCCACATTCTCAT 58.988 47.619 12.36 0.00 39.27 2.90
408 409 1.441738 CACGATGTGCCACATTCTCA 58.558 50.000 12.36 0.00 39.27 3.27
419 420 3.879682 CATGGCGGGCACGATGTG 61.880 66.667 15.48 2.00 44.60 3.21
486 487 1.881973 CATACGGGGCATTGGAGAATG 59.118 52.381 0.00 0.00 41.82 2.67
487 488 1.202927 CCATACGGGGCATTGGAGAAT 60.203 52.381 0.00 0.00 0.00 2.40
488 489 0.182537 CCATACGGGGCATTGGAGAA 59.817 55.000 0.00 0.00 0.00 2.87
489 490 0.986019 ACCATACGGGGCATTGGAGA 60.986 55.000 0.00 0.00 42.91 3.71
490 491 0.819259 CACCATACGGGGCATTGGAG 60.819 60.000 0.00 0.00 42.91 3.86
491 492 1.225983 CACCATACGGGGCATTGGA 59.774 57.895 0.00 0.00 42.91 3.53
492 493 3.840437 CACCATACGGGGCATTGG 58.160 61.111 0.00 0.00 42.91 3.16
498 499 2.514592 CTGCTGCACCATACGGGG 60.515 66.667 0.00 0.00 42.91 5.73
499 500 1.815421 GACTGCTGCACCATACGGG 60.815 63.158 0.00 0.00 44.81 5.28
500 501 1.815421 GGACTGCTGCACCATACGG 60.815 63.158 0.00 0.00 38.77 4.02
501 502 2.167219 CGGACTGCTGCACCATACG 61.167 63.158 9.60 2.58 0.00 3.06
502 503 1.815421 CCGGACTGCTGCACCATAC 60.815 63.158 0.00 0.00 0.00 2.39
503 504 1.987306 TCCGGACTGCTGCACCATA 60.987 57.895 0.00 0.00 0.00 2.74
504 505 3.321648 TCCGGACTGCTGCACCAT 61.322 61.111 0.00 0.00 0.00 3.55
505 506 4.314440 GTCCGGACTGCTGCACCA 62.314 66.667 27.64 0.00 0.00 4.17
512 513 4.980805 TTGTGGCGTCCGGACTGC 62.981 66.667 30.64 30.64 0.00 4.40
513 514 3.041940 GTTGTGGCGTCCGGACTG 61.042 66.667 30.92 23.99 0.00 3.51
514 515 4.309950 GGTTGTGGCGTCCGGACT 62.310 66.667 30.92 0.00 0.00 3.85
523 524 4.101790 CCATGACGCGGTTGTGGC 62.102 66.667 12.47 0.00 0.00 5.01
524 525 2.668212 ACCATGACGCGGTTGTGG 60.668 61.111 12.47 15.31 30.53 4.17
525 526 2.555782 CACCATGACGCGGTTGTG 59.444 61.111 12.47 6.59 33.25 3.33
526 527 2.668212 CCACCATGACGCGGTTGT 60.668 61.111 12.47 0.00 33.25 3.32
527 528 2.358125 TCCACCATGACGCGGTTG 60.358 61.111 12.47 4.49 33.25 3.77
528 529 2.358247 GTCCACCATGACGCGGTT 60.358 61.111 12.47 0.00 33.25 4.44
534 535 2.813908 GGCGACGTCCACCATGAC 60.814 66.667 15.57 0.00 0.00 3.06
549 550 3.490759 CATGACACACGAGCCGGC 61.491 66.667 21.89 21.89 0.00 6.13
550 551 3.490759 GCATGACACACGAGCCGG 61.491 66.667 0.00 0.00 0.00 6.13
551 552 3.490759 GGCATGACACACGAGCCG 61.491 66.667 0.00 0.00 35.42 5.52
552 553 2.238847 TAGGGCATGACACACGAGCC 62.239 60.000 0.00 0.00 44.48 4.70
553 554 1.084370 GTAGGGCATGACACACGAGC 61.084 60.000 0.00 0.00 0.00 5.03
554 555 0.532573 AGTAGGGCATGACACACGAG 59.467 55.000 0.00 0.00 0.00 4.18
555 556 0.530744 GAGTAGGGCATGACACACGA 59.469 55.000 0.00 0.00 0.00 4.35
556 557 0.532573 AGAGTAGGGCATGACACACG 59.467 55.000 0.00 0.00 0.00 4.49
557 558 2.159085 GGTAGAGTAGGGCATGACACAC 60.159 54.545 0.00 0.00 0.00 3.82
558 559 2.108168 GGTAGAGTAGGGCATGACACA 58.892 52.381 0.00 0.00 0.00 3.72
559 560 2.389715 AGGTAGAGTAGGGCATGACAC 58.610 52.381 0.00 0.00 0.00 3.67
560 561 2.766263 CAAGGTAGAGTAGGGCATGACA 59.234 50.000 0.00 0.00 0.00 3.58
561 562 2.483889 GCAAGGTAGAGTAGGGCATGAC 60.484 54.545 0.00 0.00 0.00 3.06
562 563 1.762957 GCAAGGTAGAGTAGGGCATGA 59.237 52.381 0.00 0.00 0.00 3.07
563 564 1.202698 GGCAAGGTAGAGTAGGGCATG 60.203 57.143 0.00 0.00 0.00 4.06
564 565 1.132500 GGCAAGGTAGAGTAGGGCAT 58.868 55.000 0.00 0.00 0.00 4.40
565 566 1.327690 CGGCAAGGTAGAGTAGGGCA 61.328 60.000 0.00 0.00 0.00 5.36
566 567 1.041447 TCGGCAAGGTAGAGTAGGGC 61.041 60.000 0.00 0.00 0.00 5.19
567 568 0.745468 GTCGGCAAGGTAGAGTAGGG 59.255 60.000 0.00 0.00 0.00 3.53
568 569 0.381089 CGTCGGCAAGGTAGAGTAGG 59.619 60.000 0.00 0.00 0.00 3.18
569 570 0.248539 GCGTCGGCAAGGTAGAGTAG 60.249 60.000 0.00 0.00 39.62 2.57
570 571 1.660560 GGCGTCGGCAAGGTAGAGTA 61.661 60.000 14.73 0.00 42.47 2.59
571 572 2.572284 GCGTCGGCAAGGTAGAGT 59.428 61.111 0.00 0.00 39.62 3.24
572 573 2.202756 GGCGTCGGCAAGGTAGAG 60.203 66.667 14.73 0.00 42.47 2.43
573 574 3.766691 GGGCGTCGGCAAGGTAGA 61.767 66.667 21.23 0.00 42.47 2.59
574 575 3.599285 TTGGGCGTCGGCAAGGTAG 62.599 63.158 21.23 0.00 42.47 3.18
575 576 3.179888 TTTGGGCGTCGGCAAGGTA 62.180 57.895 21.23 0.00 42.47 3.08
576 577 4.572571 TTTGGGCGTCGGCAAGGT 62.573 61.111 21.23 0.00 42.47 3.50
577 578 4.038080 GTTTGGGCGTCGGCAAGG 62.038 66.667 21.23 0.00 42.47 3.61
578 579 4.038080 GGTTTGGGCGTCGGCAAG 62.038 66.667 21.23 0.00 42.47 4.01
579 580 4.877619 TGGTTTGGGCGTCGGCAA 62.878 61.111 21.23 6.42 42.47 4.52
580 581 4.877619 TTGGTTTGGGCGTCGGCA 62.878 61.111 21.23 3.99 42.47 5.69
581 582 4.337060 GTTGGTTTGGGCGTCGGC 62.337 66.667 10.88 10.88 38.90 5.54
582 583 2.902846 TGTTGGTTTGGGCGTCGG 60.903 61.111 0.00 0.00 0.00 4.79
583 584 2.113131 GAGTGTTGGTTTGGGCGTCG 62.113 60.000 0.00 0.00 0.00 5.12
584 585 1.652563 GAGTGTTGGTTTGGGCGTC 59.347 57.895 0.00 0.00 0.00 5.19
585 586 1.826487 GGAGTGTTGGTTTGGGCGT 60.826 57.895 0.00 0.00 0.00 5.68
586 587 1.388065 TTGGAGTGTTGGTTTGGGCG 61.388 55.000 0.00 0.00 0.00 6.13
587 588 0.389025 CTTGGAGTGTTGGTTTGGGC 59.611 55.000 0.00 0.00 0.00 5.36
588 589 1.039856 CCTTGGAGTGTTGGTTTGGG 58.960 55.000 0.00 0.00 0.00 4.12
589 590 1.039856 CCCTTGGAGTGTTGGTTTGG 58.960 55.000 0.00 0.00 0.00 3.28
590 591 1.039856 CCCCTTGGAGTGTTGGTTTG 58.960 55.000 0.00 0.00 0.00 2.93
591 592 0.759060 GCCCCTTGGAGTGTTGGTTT 60.759 55.000 0.00 0.00 0.00 3.27
592 593 1.152546 GCCCCTTGGAGTGTTGGTT 60.153 57.895 0.00 0.00 0.00 3.67
593 594 2.520968 GCCCCTTGGAGTGTTGGT 59.479 61.111 0.00 0.00 0.00 3.67
594 595 2.672996 CGCCCCTTGGAGTGTTGG 60.673 66.667 0.00 0.00 0.00 3.77
595 596 3.365265 GCGCCCCTTGGAGTGTTG 61.365 66.667 0.00 0.00 33.30 3.33
596 597 3.429372 TTGCGCCCCTTGGAGTGTT 62.429 57.895 4.18 0.00 33.30 3.32
597 598 3.884774 TTGCGCCCCTTGGAGTGT 61.885 61.111 4.18 0.00 33.30 3.55
598 599 3.365265 GTTGCGCCCCTTGGAGTG 61.365 66.667 4.18 0.00 33.30 3.51
599 600 4.660938 GGTTGCGCCCCTTGGAGT 62.661 66.667 4.18 0.00 33.30 3.85
600 601 4.659172 TGGTTGCGCCCCTTGGAG 62.659 66.667 4.18 0.00 36.04 3.86
601 602 4.659172 CTGGTTGCGCCCCTTGGA 62.659 66.667 4.18 0.00 36.04 3.53
611 612 4.947147 TGTCCGGTGGCTGGTTGC 62.947 66.667 0.00 0.00 41.94 4.17
612 613 2.034066 ATGTCCGGTGGCTGGTTG 59.966 61.111 0.00 0.00 0.00 3.77
613 614 2.034066 CATGTCCGGTGGCTGGTT 59.966 61.111 0.00 0.00 0.00 3.67
614 615 4.033776 CCATGTCCGGTGGCTGGT 62.034 66.667 0.00 0.00 0.00 4.00
615 616 4.802051 CCCATGTCCGGTGGCTGG 62.802 72.222 0.00 4.73 35.35 4.85
638 639 4.493747 GGAACTCGTCCGGCTCCG 62.494 72.222 0.00 0.48 36.40 4.63
645 646 2.358939 TCTTTAAGCGGAACTCGTCC 57.641 50.000 0.00 0.00 43.90 4.79
646 647 3.508762 TCATCTTTAAGCGGAACTCGTC 58.491 45.455 0.00 0.00 41.72 4.20
647 648 3.587797 TCATCTTTAAGCGGAACTCGT 57.412 42.857 0.00 0.00 41.72 4.18
648 649 6.420903 TCAATATCATCTTTAAGCGGAACTCG 59.579 38.462 0.00 0.00 42.76 4.18
649 650 7.715265 TCAATATCATCTTTAAGCGGAACTC 57.285 36.000 0.00 0.00 0.00 3.01
650 651 8.682936 AATCAATATCATCTTTAAGCGGAACT 57.317 30.769 0.00 0.00 0.00 3.01
651 652 7.742089 CGAATCAATATCATCTTTAAGCGGAAC 59.258 37.037 0.00 0.00 0.00 3.62
652 653 7.655732 TCGAATCAATATCATCTTTAAGCGGAA 59.344 33.333 0.00 0.00 0.00 4.30
653 654 7.151976 TCGAATCAATATCATCTTTAAGCGGA 58.848 34.615 0.00 0.00 0.00 5.54
654 655 7.351414 TCGAATCAATATCATCTTTAAGCGG 57.649 36.000 0.00 0.00 0.00 5.52
655 656 8.491152 ACTTCGAATCAATATCATCTTTAAGCG 58.509 33.333 0.00 0.00 0.00 4.68
669 670 9.014297 ACCTCAAATTAGAAACTTCGAATCAAT 57.986 29.630 0.00 0.00 32.47 2.57
670 671 8.391075 ACCTCAAATTAGAAACTTCGAATCAA 57.609 30.769 0.00 0.00 32.47 2.57
671 672 7.979444 ACCTCAAATTAGAAACTTCGAATCA 57.021 32.000 0.00 0.00 32.47 2.57
673 674 9.892130 AGATACCTCAAATTAGAAACTTCGAAT 57.108 29.630 0.00 0.00 34.62 3.34
674 675 9.151471 CAGATACCTCAAATTAGAAACTTCGAA 57.849 33.333 0.00 0.00 0.00 3.71
675 676 8.528643 TCAGATACCTCAAATTAGAAACTTCGA 58.471 33.333 0.00 0.00 0.00 3.71
676 677 8.703604 TCAGATACCTCAAATTAGAAACTTCG 57.296 34.615 0.00 0.00 0.00 3.79
678 679 8.936864 CGTTCAGATACCTCAAATTAGAAACTT 58.063 33.333 0.00 0.00 0.00 2.66
679 680 8.095169 ACGTTCAGATACCTCAAATTAGAAACT 58.905 33.333 0.00 0.00 0.00 2.66
680 681 8.169268 CACGTTCAGATACCTCAAATTAGAAAC 58.831 37.037 0.00 0.00 0.00 2.78
681 682 7.333423 CCACGTTCAGATACCTCAAATTAGAAA 59.667 37.037 0.00 0.00 0.00 2.52
682 683 6.816640 CCACGTTCAGATACCTCAAATTAGAA 59.183 38.462 0.00 0.00 0.00 2.10
683 684 6.153851 TCCACGTTCAGATACCTCAAATTAGA 59.846 38.462 0.00 0.00 0.00 2.10
684 685 6.338146 TCCACGTTCAGATACCTCAAATTAG 58.662 40.000 0.00 0.00 0.00 1.73
685 686 6.288941 TCCACGTTCAGATACCTCAAATTA 57.711 37.500 0.00 0.00 0.00 1.40
686 687 5.160607 TCCACGTTCAGATACCTCAAATT 57.839 39.130 0.00 0.00 0.00 1.82
687 688 4.819105 TCCACGTTCAGATACCTCAAAT 57.181 40.909 0.00 0.00 0.00 2.32
688 689 4.610605 TTCCACGTTCAGATACCTCAAA 57.389 40.909 0.00 0.00 0.00 2.69
689 690 4.819105 ATTCCACGTTCAGATACCTCAA 57.181 40.909 0.00 0.00 0.00 3.02
690 691 4.221924 TGAATTCCACGTTCAGATACCTCA 59.778 41.667 2.27 0.00 32.23 3.86
691 692 4.755411 TGAATTCCACGTTCAGATACCTC 58.245 43.478 2.27 0.00 32.23 3.85
692 693 4.819105 TGAATTCCACGTTCAGATACCT 57.181 40.909 2.27 0.00 32.23 3.08
693 694 6.436843 AAATGAATTCCACGTTCAGATACC 57.563 37.500 2.27 0.00 38.81 2.73
716 717 2.070783 GTGACCGATCACGCCTAAAAA 58.929 47.619 0.00 0.00 45.66 1.94
717 718 1.717194 GTGACCGATCACGCCTAAAA 58.283 50.000 0.00 0.00 45.66 1.52
718 719 3.429043 GTGACCGATCACGCCTAAA 57.571 52.632 0.00 0.00 45.66 1.85
726 727 0.039527 CGTGACACAGTGACCGATCA 60.040 55.000 7.81 0.00 0.00 2.92
727 728 0.732880 CCGTGACACAGTGACCGATC 60.733 60.000 7.81 0.00 0.00 3.69
728 729 1.176619 TCCGTGACACAGTGACCGAT 61.177 55.000 7.81 0.00 0.00 4.18
729 730 1.824760 TCCGTGACACAGTGACCGA 60.825 57.895 7.81 0.00 0.00 4.69
730 731 1.660575 GTCCGTGACACAGTGACCG 60.661 63.158 7.81 7.18 32.09 4.79
731 732 0.179094 TTGTCCGTGACACAGTGACC 60.179 55.000 7.81 0.00 42.60 4.02
732 733 1.202371 TCTTGTCCGTGACACAGTGAC 60.202 52.381 7.81 9.28 42.60 3.67
733 734 1.107945 TCTTGTCCGTGACACAGTGA 58.892 50.000 7.81 0.00 42.60 3.41
734 735 1.934589 TTCTTGTCCGTGACACAGTG 58.065 50.000 6.37 0.00 42.60 3.66
735 736 2.093658 ACTTTCTTGTCCGTGACACAGT 60.094 45.455 6.37 0.00 42.60 3.55
736 737 2.550978 ACTTTCTTGTCCGTGACACAG 58.449 47.619 6.37 0.00 42.60 3.66
737 738 2.684001 ACTTTCTTGTCCGTGACACA 57.316 45.000 6.37 0.00 42.60 3.72
738 739 3.714391 AGTACTTTCTTGTCCGTGACAC 58.286 45.455 6.27 0.00 42.60 3.67
739 740 4.581824 ACTAGTACTTTCTTGTCCGTGACA 59.418 41.667 0.00 3.02 41.09 3.58
740 741 4.916249 CACTAGTACTTTCTTGTCCGTGAC 59.084 45.833 0.00 0.00 0.00 3.67
741 742 4.022589 CCACTAGTACTTTCTTGTCCGTGA 60.023 45.833 0.00 0.00 0.00 4.35
742 743 4.022589 TCCACTAGTACTTTCTTGTCCGTG 60.023 45.833 0.00 0.00 0.00 4.94
743 744 4.147321 TCCACTAGTACTTTCTTGTCCGT 58.853 43.478 0.00 0.00 0.00 4.69
744 745 4.778534 TCCACTAGTACTTTCTTGTCCG 57.221 45.455 0.00 0.00 0.00 4.79
745 746 6.099159 AGTTCCACTAGTACTTTCTTGTCC 57.901 41.667 0.00 0.00 0.00 4.02
746 747 6.746120 TGAGTTCCACTAGTACTTTCTTGTC 58.254 40.000 0.00 0.00 0.00 3.18
747 748 6.726490 TGAGTTCCACTAGTACTTTCTTGT 57.274 37.500 0.00 0.00 0.00 3.16
748 749 8.524487 AGTATGAGTTCCACTAGTACTTTCTTG 58.476 37.037 0.00 0.00 29.56 3.02
749 750 8.653036 AGTATGAGTTCCACTAGTACTTTCTT 57.347 34.615 0.00 0.00 29.56 2.52
750 751 8.653036 AAGTATGAGTTCCACTAGTACTTTCT 57.347 34.615 0.00 0.00 36.18 2.52
751 752 8.741841 AGAAGTATGAGTTCCACTAGTACTTTC 58.258 37.037 0.00 0.00 37.98 2.62
752 753 8.524487 CAGAAGTATGAGTTCCACTAGTACTTT 58.476 37.037 0.00 0.00 37.98 2.66
753 754 7.670559 ACAGAAGTATGAGTTCCACTAGTACTT 59.329 37.037 0.00 10.77 39.28 2.24
754 755 7.176490 ACAGAAGTATGAGTTCCACTAGTACT 58.824 38.462 0.00 0.00 32.95 2.73
755 756 7.393841 ACAGAAGTATGAGTTCCACTAGTAC 57.606 40.000 0.00 0.00 0.00 2.73
756 757 7.148289 CGAACAGAAGTATGAGTTCCACTAGTA 60.148 40.741 0.00 0.00 37.63 1.82
757 758 6.349445 CGAACAGAAGTATGAGTTCCACTAGT 60.349 42.308 0.00 0.00 37.63 2.57
758 759 6.030849 CGAACAGAAGTATGAGTTCCACTAG 58.969 44.000 0.00 0.00 37.63 2.57
759 760 5.105877 CCGAACAGAAGTATGAGTTCCACTA 60.106 44.000 0.00 0.00 37.63 2.74
760 761 4.322049 CCGAACAGAAGTATGAGTTCCACT 60.322 45.833 0.00 0.00 37.63 4.00
761 762 3.927142 CCGAACAGAAGTATGAGTTCCAC 59.073 47.826 0.00 0.00 37.63 4.02
762 763 3.056107 CCCGAACAGAAGTATGAGTTCCA 60.056 47.826 0.00 0.00 37.63 3.53
763 764 3.522553 CCCGAACAGAAGTATGAGTTCC 58.477 50.000 0.00 0.00 37.63 3.62
781 782 6.208007 ACTTTTATTTACTTTCTTGTCCCCCG 59.792 38.462 0.00 0.00 0.00 5.73
806 807 7.982919 TCGGACTGCTGCTTTTATTTACTAATA 59.017 33.333 0.00 0.00 0.00 0.98
808 809 6.167685 TCGGACTGCTGCTTTTATTTACTAA 58.832 36.000 0.00 0.00 0.00 2.24
811 812 4.939509 TCGGACTGCTGCTTTTATTTAC 57.060 40.909 0.00 0.00 0.00 2.01
812 813 4.941263 ACATCGGACTGCTGCTTTTATTTA 59.059 37.500 0.00 0.00 0.00 1.40
813 814 3.758554 ACATCGGACTGCTGCTTTTATTT 59.241 39.130 0.00 0.00 0.00 1.40
816 817 2.472695 ACATCGGACTGCTGCTTTTA 57.527 45.000 0.00 0.00 0.00 1.52
818 819 1.726853 GTACATCGGACTGCTGCTTT 58.273 50.000 0.00 0.00 0.00 3.51
819 820 0.458543 CGTACATCGGACTGCTGCTT 60.459 55.000 0.00 0.00 35.71 3.91
821 822 0.249073 ATCGTACATCGGACTGCTGC 60.249 55.000 0.00 0.00 40.32 5.25
823 824 0.385751 CCATCGTACATCGGACTGCT 59.614 55.000 0.00 0.00 40.32 4.24
824 825 0.384309 TCCATCGTACATCGGACTGC 59.616 55.000 0.00 0.00 40.32 4.40
825 826 1.597199 CGTCCATCGTACATCGGACTG 60.597 57.143 17.67 10.44 44.76 3.51
826 827 0.661552 CGTCCATCGTACATCGGACT 59.338 55.000 17.67 0.00 44.76 3.85
846 847 6.324770 GTCTTGATTTTTACCATCCATCCCAT 59.675 38.462 0.00 0.00 0.00 4.00
849 850 5.069119 GGGTCTTGATTTTTACCATCCATCC 59.931 44.000 0.00 0.00 33.46 3.51
885 886 4.862350 TCTGTCAATTTCGACGAACAGTA 58.138 39.130 20.32 4.65 38.84 2.74
886 887 3.713288 TCTGTCAATTTCGACGAACAGT 58.287 40.909 20.32 6.69 38.84 3.55
887 888 4.444388 TCTTCTGTCAATTTCGACGAACAG 59.556 41.667 16.81 16.81 38.84 3.16
888 889 4.364860 TCTTCTGTCAATTTCGACGAACA 58.635 39.130 10.38 4.42 38.84 3.18
889 890 4.966850 TCTTCTGTCAATTTCGACGAAC 57.033 40.909 10.38 0.00 38.84 3.95
890 891 5.751509 TCTTTCTTCTGTCAATTTCGACGAA 59.248 36.000 6.10 6.10 38.84 3.85
901 902 5.630415 TCCTCCTTTTCTTTCTTCTGTCA 57.370 39.130 0.00 0.00 0.00 3.58
904 905 5.057149 TCGTTCCTCCTTTTCTTTCTTCTG 58.943 41.667 0.00 0.00 0.00 3.02
911 912 5.010719 GGGATTTTTCGTTCCTCCTTTTCTT 59.989 40.000 0.00 0.00 32.34 2.52
1198 1211 3.478274 CTCCTGCCCCTCCTGCTC 61.478 72.222 0.00 0.00 0.00 4.26
1201 1214 2.767496 CTCCTCCTGCCCCTCCTG 60.767 72.222 0.00 0.00 0.00 3.86
1202 1215 2.955246 TCTCCTCCTGCCCCTCCT 60.955 66.667 0.00 0.00 0.00 3.69
1203 1216 2.445654 CTCTCCTCCTGCCCCTCC 60.446 72.222 0.00 0.00 0.00 4.30
1204 1217 3.160748 GCTCTCCTCCTGCCCCTC 61.161 72.222 0.00 0.00 0.00 4.30
1207 1220 3.844090 GACGCTCTCCTCCTGCCC 61.844 72.222 0.00 0.00 0.00 5.36
1302 1315 1.443407 CTCCATACAGACGGGGCAG 59.557 63.158 0.00 0.00 0.00 4.85
1311 1324 0.692419 AGGTCCAGGGCTCCATACAG 60.692 60.000 0.00 0.00 0.00 2.74
1369 1382 0.034670 AGACCAGGCAAGAATGAGGC 60.035 55.000 0.00 0.00 0.00 4.70
1370 1383 1.747709 CAGACCAGGCAAGAATGAGG 58.252 55.000 0.00 0.00 0.00 3.86
1373 1386 0.957395 ACGCAGACCAGGCAAGAATG 60.957 55.000 0.00 0.00 0.00 2.67
1405 1418 1.620819 CCTGTTCCTGTGACAGCTAGT 59.379 52.381 7.16 0.00 42.42 2.57
1406 1419 1.066573 CCCTGTTCCTGTGACAGCTAG 60.067 57.143 7.16 2.24 42.42 3.42
1437 1451 8.294954 TAACCATTGTTACTTGGAAAGAAACA 57.705 30.769 10.89 0.00 40.23 2.83
1454 1468 1.203052 CTTGCAGCCCAGTAACCATTG 59.797 52.381 0.00 0.00 0.00 2.82
1468 1483 7.439056 ACATTGTAAGTTTCCATTTTCTTGCAG 59.561 33.333 0.00 0.00 35.01 4.41
1482 1497 9.196552 GTAGTACCGTTAGAACATTGTAAGTTT 57.803 33.333 0.00 0.00 0.00 2.66
1496 1511 6.417044 GTGCAATCATGTAGTAGTACCGTTAG 59.583 42.308 5.26 0.00 0.00 2.34
1505 1520 5.909210 CGCTAATGTGCAATCATGTAGTAG 58.091 41.667 0.00 0.00 0.00 2.57
1539 1554 1.591248 CGTCAAAATTCAAGGCGACG 58.409 50.000 0.00 0.00 40.04 5.12
1542 1557 1.401018 GGTCCGTCAAAATTCAAGGCG 60.401 52.381 0.00 0.00 0.00 5.52
1577 1592 6.739331 TGGAAACAAAAACCAGGATTACAT 57.261 33.333 0.00 0.00 37.44 2.29
1603 1618 1.639298 GCACACCGAATCCACAGAGC 61.639 60.000 0.00 0.00 0.00 4.09
1607 1622 0.324614 ATCTGCACACCGAATCCACA 59.675 50.000 0.00 0.00 0.00 4.17
1608 1623 0.729116 CATCTGCACACCGAATCCAC 59.271 55.000 0.00 0.00 0.00 4.02
1614 1629 2.046988 CAGCCATCTGCACACCGA 60.047 61.111 0.00 0.00 44.83 4.69
1615 1630 1.968017 AACAGCCATCTGCACACCG 60.968 57.895 0.00 0.00 44.10 4.94
1617 1632 0.239347 GTCAACAGCCATCTGCACAC 59.761 55.000 0.00 0.00 44.10 3.82
1621 1636 1.527034 TTCAGTCAACAGCCATCTGC 58.473 50.000 0.00 0.00 44.10 4.26
1622 1637 4.022589 ACAATTTCAGTCAACAGCCATCTG 60.023 41.667 0.00 0.00 45.71 2.90
1628 1643 5.931441 AGAGTACAATTTCAGTCAACAGC 57.069 39.130 0.00 0.00 0.00 4.40
1672 1748 2.369257 ATCTGCCGTAGACATGCCCG 62.369 60.000 0.00 0.00 38.49 6.13
1789 1865 0.029035 GCTGATTGCGCAGAAGGATG 59.971 55.000 11.31 0.00 38.14 3.51
1831 1909 1.614051 CCACATTGAGGGCACTAGCAA 60.614 52.381 0.00 0.00 44.61 3.91
1915 1993 2.770164 ACCCAACCTTCTCAAGATCG 57.230 50.000 0.00 0.00 0.00 3.69
1953 2032 2.855370 CGCGGCCAAAACAAAATATACC 59.145 45.455 2.24 0.00 0.00 2.73
2067 2146 0.721718 CAACTAAAGAAGCTCGCGGG 59.278 55.000 6.13 2.60 0.00 6.13
2069 2148 1.059835 GAGCAACTAAAGAAGCTCGCG 59.940 52.381 0.00 0.00 43.27 5.87
2252 2333 5.570234 TTTAATCGTTTAGAATGTGGGGC 57.430 39.130 0.00 0.00 0.00 5.80
2253 2334 8.032451 ACAATTTTAATCGTTTAGAATGTGGGG 58.968 33.333 3.54 0.00 0.00 4.96
2267 2348 6.932901 ATGCACTTGACACAATTTTAATCG 57.067 33.333 0.00 0.00 0.00 3.34
2271 2352 7.012799 TGACACTATGCACTTGACACAATTTTA 59.987 33.333 0.00 0.00 0.00 1.52
2291 2372 7.036220 GTGCAAACATACTATCTAGTGACACT 58.964 38.462 13.68 13.68 37.10 3.55
2389 2470 7.377928 GGAACAATCGATGAATAAAGCAAGATG 59.622 37.037 0.00 0.00 0.00 2.90
2392 2473 6.690098 CAGGAACAATCGATGAATAAAGCAAG 59.310 38.462 0.00 0.00 0.00 4.01
2430 2511 6.093909 TGACAACTATTGATCATTGCGACATT 59.906 34.615 0.00 0.00 0.00 2.71
2435 2516 5.023920 GTGTGACAACTATTGATCATTGCG 58.976 41.667 0.00 0.00 0.00 4.85
2456 2537 4.199432 AGGCATAAGTCTCTCACAAGTG 57.801 45.455 0.00 0.00 0.00 3.16
2467 2548 8.462016 ACACATAAGAAAATGAAGGCATAAGTC 58.538 33.333 0.00 0.00 33.44 3.01
2476 2557 6.017400 AGGCACACACATAAGAAAATGAAG 57.983 37.500 0.00 0.00 0.00 3.02
2516 2597 1.896220 TTGAGACACCAACATCTGCC 58.104 50.000 0.00 0.00 0.00 4.85
2736 2817 6.668323 TGTTTACAGCTGAAAATAGCACTTC 58.332 36.000 23.35 2.67 46.07 3.01
2782 2863 9.607988 CCCATTATCAGTAAAACATGTAGTACA 57.392 33.333 16.89 5.24 0.00 2.90
2808 2889 7.093354 TCAGATCAGACAAGAATACAAGACAC 58.907 38.462 0.00 0.00 0.00 3.67
2866 2947 4.438744 CCAACCCAATTTCTACTTCGATGC 60.439 45.833 0.00 0.00 0.00 3.91
3059 3153 5.613358 AAGTTTCAGCTTCCTTAATCACG 57.387 39.130 0.00 0.00 0.00 4.35
3081 3175 5.593909 AGATCTGACAATCAACACAACCAAA 59.406 36.000 0.00 0.00 0.00 3.28
3218 3312 5.269991 ACTGGAGTATTCTGTACTAAGCCA 58.730 41.667 0.00 0.00 0.00 4.75
3219 3313 5.855740 ACTGGAGTATTCTGTACTAAGCC 57.144 43.478 0.00 0.00 0.00 4.35
3221 3315 9.141400 GACAAAACTGGAGTATTCTGTACTAAG 57.859 37.037 0.00 0.00 0.00 2.18
3222 3316 8.092687 GGACAAAACTGGAGTATTCTGTACTAA 58.907 37.037 0.00 0.00 0.00 2.24
3541 3705 7.338449 TCCCAGAAGCAAGTATTATTTGGTTAC 59.662 37.037 14.02 9.35 43.81 2.50
3619 3788 8.260114 GTGATATCCATTTTGGGAGAAAAACAT 58.740 33.333 0.00 0.00 41.08 2.71
3675 3848 7.277098 GCATGCTAATCTGTTGACATTGAAAAT 59.723 33.333 11.37 0.00 0.00 1.82
3723 3896 7.676683 TTAGTATCAGGAGGAAGCTGTATTT 57.323 36.000 0.00 0.00 0.00 1.40
3844 4017 5.473504 ACAGAAGAACCACCATTTGTCATAC 59.526 40.000 0.00 0.00 0.00 2.39
3896 4069 9.840427 ACGATTAGTGTTCAAAAGAAATAATGG 57.160 29.630 0.00 0.00 0.00 3.16
4008 4182 8.233692 TGCCGATTCAAAATACAAAACATTAC 57.766 30.769 0.00 0.00 0.00 1.89
4029 4203 0.958091 TTGGTTCACCTGATTTGCCG 59.042 50.000 0.00 0.00 36.82 5.69
4037 4211 7.094248 TGTCATTATCTGAAATTGGTTCACCTG 60.094 37.037 0.00 0.00 41.47 4.00
4065 4239 9.298250 GGTAGTGTGATAGAGAATTAGGTCATA 57.702 37.037 0.00 0.00 0.00 2.15
4076 4250 4.991153 CTGCAAGGTAGTGTGATAGAGA 57.009 45.455 0.00 0.00 0.00 3.10
4138 4312 0.521242 CAAGCCAGCATAAACGCGAC 60.521 55.000 15.93 0.00 36.85 5.19
4216 4390 3.648339 ACACAACAAGGACATTCATGC 57.352 42.857 0.00 0.00 0.00 4.06
4387 4561 2.933617 ATCCCACATGCAAGGCCCA 61.934 57.895 0.00 0.00 0.00 5.36
4474 4648 5.674525 ACACCAATCGACATCAGTAATGAT 58.325 37.500 0.00 0.00 38.83 2.45
4506 4680 2.885502 CAAAGTTGCAAAGGCGGTC 58.114 52.632 0.00 0.00 45.35 4.79
4608 4785 0.387878 CGCAAGAGAGAAGCAGACGT 60.388 55.000 0.00 0.00 43.02 4.34
4609 4786 0.387878 ACGCAAGAGAGAAGCAGACG 60.388 55.000 0.00 0.00 43.62 4.18
4733 4910 1.363807 CTGCACCAGACTGTGTCGA 59.636 57.895 0.93 0.00 38.52 4.20
4741 4918 0.890996 CCAGTTTCCCTGCACCAGAC 60.891 60.000 0.00 0.00 40.06 3.51
4753 4930 2.564721 GGTGTGCTGCCCCAGTTTC 61.565 63.158 0.00 0.00 33.43 2.78
5158 5335 3.552132 TGTACACAGCAAAAGGACTGA 57.448 42.857 0.00 0.00 37.35 3.41
5271 5603 3.249799 CACCGCATACAACTCAAAACAGA 59.750 43.478 0.00 0.00 0.00 3.41
5387 5744 5.064452 GGAAAGCATGTGTGTCATCTTAGAG 59.936 44.000 0.00 0.00 34.09 2.43
5391 5748 2.485426 CGGAAAGCATGTGTGTCATCTT 59.515 45.455 0.00 0.00 34.09 2.40
5392 5749 2.079158 CGGAAAGCATGTGTGTCATCT 58.921 47.619 0.00 0.00 34.09 2.90
5393 5750 1.131126 CCGGAAAGCATGTGTGTCATC 59.869 52.381 0.00 0.00 34.09 2.92
5394 5751 1.167851 CCGGAAAGCATGTGTGTCAT 58.832 50.000 0.00 0.00 37.22 3.06
5395 5752 0.888736 CCCGGAAAGCATGTGTGTCA 60.889 55.000 0.73 0.00 0.00 3.58
5396 5753 1.875963 CCCGGAAAGCATGTGTGTC 59.124 57.895 0.73 0.00 0.00 3.67
5397 5754 2.268076 GCCCGGAAAGCATGTGTGT 61.268 57.895 0.73 0.00 0.00 3.72
5398 5755 2.267351 TGCCCGGAAAGCATGTGTG 61.267 57.895 0.73 0.00 34.69 3.82
5399 5756 2.115052 TGCCCGGAAAGCATGTGT 59.885 55.556 0.73 0.00 34.69 3.72
5497 5854 3.610040 AACGTTCAGGACATATCAGCA 57.390 42.857 0.00 0.00 0.00 4.41
5502 5859 3.992943 TCCCAAACGTTCAGGACATAT 57.007 42.857 18.37 0.00 0.00 1.78
5505 5862 2.621055 CAAATCCCAAACGTTCAGGACA 59.379 45.455 18.53 7.38 0.00 4.02
5571 5938 3.237268 ACCAACTAAACTTGCCATCCA 57.763 42.857 0.00 0.00 0.00 3.41
5619 5986 4.084589 GCACGGTAATTTTCTGGCAAAAAG 60.085 41.667 11.31 3.39 32.04 2.27
5703 6070 5.061311 ACGTAATAACAGAACGGAAATGACG 59.939 40.000 0.00 0.00 40.81 4.35
5730 6097 3.733224 CGTGCAATGAAATCAAACGGAAA 59.267 39.130 0.00 0.00 0.00 3.13
5840 6207 2.754552 GGTTTCTACTGATGGCATGCAA 59.245 45.455 21.36 9.21 0.00 4.08
5948 6350 8.721019 ACCAAAGAAAAATATTGTATGCCATG 57.279 30.769 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.