Multiple sequence alignment - TraesCS4B01G378900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G378900 chr4B 100.000 5411 0 0 1 5411 660478356 660483766 0.000000e+00 9993.0
1 TraesCS4B01G378900 chr4B 88.806 134 11 3 410 542 398529334 398529204 1.560000e-35 161.0
2 TraesCS4B01G378900 chr5A 93.869 4779 208 40 652 5410 700212321 700207608 0.000000e+00 7123.0
3 TraesCS4B01G378900 chr5A 89.855 69 6 1 5022 5090 558145145 558145212 2.680000e-13 87.9
4 TraesCS4B01G378900 chr5A 82.667 75 11 2 323 395 276110853 276110927 1.260000e-06 65.8
5 TraesCS4B01G378900 chr5A 91.111 45 3 1 5047 5091 521007412 521007455 5.850000e-05 60.2
6 TraesCS4B01G378900 chrUn 96.462 3505 88 13 652 4141 110382161 110385644 0.000000e+00 5753.0
7 TraesCS4B01G378900 chrUn 90.741 756 30 21 4166 4903 110385640 110386373 0.000000e+00 972.0
8 TraesCS4B01G378900 chrUn 93.160 307 15 5 5107 5410 110386402 110386705 3.850000e-121 446.0
9 TraesCS4B01G378900 chrUn 81.690 71 10 3 327 395 292248336 292248267 7.570000e-04 56.5
10 TraesCS4B01G378900 chr1B 82.175 331 47 8 2392 2719 623112888 623112567 1.920000e-69 274.0
11 TraesCS4B01G378900 chr1B 92.958 71 5 0 5023 5093 48740546 48740476 2.670000e-18 104.0
12 TraesCS4B01G378900 chr1A 81.873 331 48 8 2392 2719 320514461 320514140 8.930000e-68 268.0
13 TraesCS4B01G378900 chr3B 90.299 134 8 4 411 543 681556446 681556317 2.590000e-38 171.0
14 TraesCS4B01G378900 chr3A 89.051 137 12 2 409 545 13008955 13008822 3.350000e-37 167.0
15 TraesCS4B01G378900 chr3A 87.681 138 14 2 406 543 644820526 644820392 2.020000e-34 158.0
16 TraesCS4B01G378900 chr5B 88.806 134 12 2 409 542 661344960 661344830 1.560000e-35 161.0
17 TraesCS4B01G378900 chr5B 87.591 137 14 2 413 549 567933208 567933075 7.260000e-34 156.0
18 TraesCS4B01G378900 chr5B 87.050 139 15 3 413 551 586914655 586914790 2.610000e-33 154.0
19 TraesCS4B01G378900 chr7A 88.060 134 13 3 413 546 208247352 208247482 7.260000e-34 156.0
20 TraesCS4B01G378900 chr7A 83.784 74 10 2 253 324 455590006 455590079 9.730000e-08 69.4
21 TraesCS4B01G378900 chr6A 85.714 147 17 3 396 542 572398740 572398882 9.390000e-33 152.0
22 TraesCS4B01G378900 chr6A 97.143 35 1 0 326 360 80803235 80803201 5.850000e-05 60.2
23 TraesCS4B01G378900 chr6A 89.130 46 4 1 5046 5091 38748156 38748200 7.570000e-04 56.5
24 TraesCS4B01G378900 chr7B 88.060 67 8 0 5027 5093 9682314 9682248 4.490000e-11 80.5
25 TraesCS4B01G378900 chr5D 88.525 61 6 1 327 386 502414276 502414216 7.520000e-09 73.1
26 TraesCS4B01G378900 chr3D 88.889 54 6 0 271 324 94791069 94791122 3.500000e-07 67.6
27 TraesCS4B01G378900 chr3D 81.690 71 12 1 327 396 589674787 589674717 2.110000e-04 58.4
28 TraesCS4B01G378900 chr2D 83.333 72 12 0 5022 5093 7087616 7087545 3.500000e-07 67.6
29 TraesCS4B01G378900 chr2D 85.246 61 8 1 327 386 19554134 19554194 1.630000e-05 62.1
30 TraesCS4B01G378900 chr2D 97.059 34 1 0 327 360 8134161 8134128 2.110000e-04 58.4
31 TraesCS4B01G378900 chr2B 87.273 55 7 0 5022 5076 2218261 2218315 4.520000e-06 63.9
32 TraesCS4B01G378900 chr7D 91.111 45 3 1 5047 5091 584458392 584458435 5.850000e-05 60.2
33 TraesCS4B01G378900 chr6D 94.737 38 2 0 323 360 454889373 454889410 5.850000e-05 60.2
34 TraesCS4B01G378900 chr6D 94.737 38 2 0 323 360 454922928 454922965 5.850000e-05 60.2
35 TraesCS4B01G378900 chr6B 100.000 29 0 0 557 585 33970024 33970052 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G378900 chr4B 660478356 660483766 5410 False 9993.000000 9993 100.000000 1 5411 1 chr4B.!!$F1 5410
1 TraesCS4B01G378900 chr5A 700207608 700212321 4713 True 7123.000000 7123 93.869000 652 5410 1 chr5A.!!$R1 4758
2 TraesCS4B01G378900 chrUn 110382161 110386705 4544 False 2390.333333 5753 93.454333 652 5410 3 chrUn.!!$F1 4758

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
934 947 0.034616 CCTCATCCAGCGATTCTCCC 59.965 60.0 0.00 0.0 0.00 4.30 F
1560 1573 0.326264 AGGACAGGTGGCTTCACATC 59.674 55.0 0.00 0.0 42.91 3.06 F
2019 2032 0.669318 TCGGTACTGGCTTGCTTTCG 60.669 55.0 0.85 0.0 0.00 3.46 F
3021 3034 0.747852 TGTCTACACAGTGCCGTCAA 59.252 50.0 0.00 0.0 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2019 2032 1.190643 AGCTCTCAGCACTTAGGTCC 58.809 55.000 0.0 0.0 45.56 4.46 R
3090 3103 1.072015 CCATCATCCAGAAGAGCCCTC 59.928 57.143 0.0 0.0 0.00 4.30 R
3448 3461 5.934625 ACGATGTCCCTTGAATCATATTAGC 59.065 40.000 0.0 0.0 0.00 3.09 R
4800 4827 0.324368 ACATCAGAGTCGCCACCCTA 60.324 55.000 0.0 0.0 0.00 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.503314 GCATGAGCGGCAAAGGGC 62.503 66.667 1.45 0.00 43.74 5.19
28 29 3.793144 GCAAAGGGCGAGCGTGAG 61.793 66.667 0.00 0.00 0.00 3.51
29 30 2.357517 CAAAGGGCGAGCGTGAGT 60.358 61.111 0.00 0.00 0.00 3.41
30 31 2.357517 AAAGGGCGAGCGTGAGTG 60.358 61.111 0.00 0.00 0.00 3.51
31 32 3.883744 AAAGGGCGAGCGTGAGTGG 62.884 63.158 0.00 0.00 0.00 4.00
36 37 4.363990 CGAGCGTGAGTGGCCACT 62.364 66.667 38.42 38.42 45.84 4.00
43 44 2.946762 GAGTGGCCACTCGCAAAC 59.053 61.111 42.04 24.46 46.93 2.93
44 45 1.891919 GAGTGGCCACTCGCAAACA 60.892 57.895 42.04 0.00 46.93 2.83
45 46 1.444119 GAGTGGCCACTCGCAAACAA 61.444 55.000 42.04 0.00 46.93 2.83
46 47 0.823356 AGTGGCCACTCGCAAACAAT 60.823 50.000 33.20 6.87 36.92 2.71
47 48 0.878416 GTGGCCACTCGCAAACAATA 59.122 50.000 29.12 0.00 40.31 1.90
48 49 1.472480 GTGGCCACTCGCAAACAATAT 59.528 47.619 29.12 0.00 40.31 1.28
49 50 2.680841 GTGGCCACTCGCAAACAATATA 59.319 45.455 29.12 0.00 40.31 0.86
50 51 3.127895 GTGGCCACTCGCAAACAATATAA 59.872 43.478 29.12 0.00 40.31 0.98
51 52 3.951037 TGGCCACTCGCAAACAATATAAT 59.049 39.130 0.00 0.00 40.31 1.28
52 53 4.202000 TGGCCACTCGCAAACAATATAATG 60.202 41.667 0.00 0.00 40.31 1.90
53 54 4.036262 GGCCACTCGCAAACAATATAATGA 59.964 41.667 0.00 0.00 40.31 2.57
54 55 5.278463 GGCCACTCGCAAACAATATAATGAT 60.278 40.000 0.00 0.00 40.31 2.45
55 56 5.626543 GCCACTCGCAAACAATATAATGATG 59.373 40.000 0.00 0.00 37.47 3.07
56 57 6.144854 CCACTCGCAAACAATATAATGATGG 58.855 40.000 0.00 0.00 0.00 3.51
57 58 6.238731 CCACTCGCAAACAATATAATGATGGT 60.239 38.462 0.00 0.00 0.00 3.55
58 59 7.195646 CACTCGCAAACAATATAATGATGGTT 58.804 34.615 0.00 0.00 0.00 3.67
59 60 8.341903 CACTCGCAAACAATATAATGATGGTTA 58.658 33.333 0.00 0.00 0.00 2.85
60 61 9.066892 ACTCGCAAACAATATAATGATGGTTAT 57.933 29.630 0.00 0.00 0.00 1.89
74 75 8.833231 AATGATGGTTATAAATGGTCTAGTCG 57.167 34.615 0.00 0.00 0.00 4.18
75 76 6.755206 TGATGGTTATAAATGGTCTAGTCGG 58.245 40.000 0.00 0.00 0.00 4.79
76 77 6.551975 TGATGGTTATAAATGGTCTAGTCGGA 59.448 38.462 0.00 0.00 0.00 4.55
77 78 6.152932 TGGTTATAAATGGTCTAGTCGGAC 57.847 41.667 0.00 0.00 35.66 4.79
83 84 3.900855 GTCTAGTCGGACCTGCGA 58.099 61.111 4.14 0.00 0.00 5.10
84 85 1.428620 GTCTAGTCGGACCTGCGAC 59.571 63.158 11.01 11.01 35.58 5.19
85 86 2.104859 TCTAGTCGGACCTGCGACG 61.105 63.158 12.83 1.53 39.78 5.12
86 87 3.736482 CTAGTCGGACCTGCGACGC 62.736 68.421 14.19 14.19 39.78 5.19
95 96 4.116328 CTGCGACGCCGGAAGAGA 62.116 66.667 18.69 0.00 35.22 3.10
96 97 3.626680 CTGCGACGCCGGAAGAGAA 62.627 63.158 18.69 0.00 35.22 2.87
97 98 2.431942 GCGACGCCGGAAGAGAAA 60.432 61.111 9.14 0.00 36.06 2.52
98 99 2.025418 GCGACGCCGGAAGAGAAAA 61.025 57.895 9.14 0.00 36.06 2.29
99 100 1.779683 CGACGCCGGAAGAGAAAAC 59.220 57.895 5.05 0.00 0.00 2.43
100 101 0.942410 CGACGCCGGAAGAGAAAACA 60.942 55.000 5.05 0.00 0.00 2.83
101 102 1.223187 GACGCCGGAAGAGAAAACAA 58.777 50.000 5.05 0.00 0.00 2.83
102 103 1.194772 GACGCCGGAAGAGAAAACAAG 59.805 52.381 5.05 0.00 0.00 3.16
103 104 1.202604 ACGCCGGAAGAGAAAACAAGA 60.203 47.619 5.05 0.00 0.00 3.02
104 105 1.871039 CGCCGGAAGAGAAAACAAGAA 59.129 47.619 5.05 0.00 0.00 2.52
105 106 2.289547 CGCCGGAAGAGAAAACAAGAAA 59.710 45.455 5.05 0.00 0.00 2.52
106 107 3.242936 CGCCGGAAGAGAAAACAAGAAAA 60.243 43.478 5.05 0.00 0.00 2.29
107 108 4.556699 CGCCGGAAGAGAAAACAAGAAAAT 60.557 41.667 5.05 0.00 0.00 1.82
108 109 4.917998 GCCGGAAGAGAAAACAAGAAAATC 59.082 41.667 5.05 0.00 0.00 2.17
109 110 5.507315 GCCGGAAGAGAAAACAAGAAAATCA 60.507 40.000 5.05 0.00 0.00 2.57
110 111 5.915196 CCGGAAGAGAAAACAAGAAAATCAC 59.085 40.000 0.00 0.00 0.00 3.06
111 112 6.459573 CCGGAAGAGAAAACAAGAAAATCACA 60.460 38.462 0.00 0.00 0.00 3.58
112 113 7.141363 CGGAAGAGAAAACAAGAAAATCACAT 58.859 34.615 0.00 0.00 0.00 3.21
113 114 7.324616 CGGAAGAGAAAACAAGAAAATCACATC 59.675 37.037 0.00 0.00 0.00 3.06
114 115 8.355913 GGAAGAGAAAACAAGAAAATCACATCT 58.644 33.333 0.00 0.00 0.00 2.90
115 116 9.178427 GAAGAGAAAACAAGAAAATCACATCTG 57.822 33.333 0.00 0.00 0.00 2.90
116 117 8.455903 AGAGAAAACAAGAAAATCACATCTGA 57.544 30.769 0.00 0.00 0.00 3.27
117 118 9.075678 AGAGAAAACAAGAAAATCACATCTGAT 57.924 29.630 0.00 0.00 38.94 2.90
118 119 9.125906 GAGAAAACAAGAAAATCACATCTGATG 57.874 33.333 15.83 15.83 37.20 3.07
119 120 8.853126 AGAAAACAAGAAAATCACATCTGATGA 58.147 29.630 23.59 3.95 37.20 2.92
120 121 9.635520 GAAAACAAGAAAATCACATCTGATGAT 57.364 29.630 23.59 6.30 37.20 2.45
133 134 6.387041 CATCTGATGATGCTTACAAATGGT 57.613 37.500 12.27 0.00 42.83 3.55
134 135 6.436261 CATCTGATGATGCTTACAAATGGTC 58.564 40.000 12.27 0.00 42.83 4.02
135 136 5.748402 TCTGATGATGCTTACAAATGGTCT 58.252 37.500 0.00 0.00 0.00 3.85
136 137 6.888105 TCTGATGATGCTTACAAATGGTCTA 58.112 36.000 0.00 0.00 0.00 2.59
137 138 7.337938 TCTGATGATGCTTACAAATGGTCTAA 58.662 34.615 0.00 0.00 0.00 2.10
138 139 7.994911 TCTGATGATGCTTACAAATGGTCTAAT 59.005 33.333 0.00 0.00 0.00 1.73
139 140 8.158169 TGATGATGCTTACAAATGGTCTAATC 57.842 34.615 0.00 0.00 0.00 1.75
140 141 6.603237 TGATGCTTACAAATGGTCTAATCG 57.397 37.500 0.00 0.00 0.00 3.34
141 142 6.345298 TGATGCTTACAAATGGTCTAATCGA 58.655 36.000 0.00 0.00 0.00 3.59
142 143 6.992123 TGATGCTTACAAATGGTCTAATCGAT 59.008 34.615 0.00 0.00 0.00 3.59
143 144 8.147704 TGATGCTTACAAATGGTCTAATCGATA 58.852 33.333 0.00 0.00 0.00 2.92
144 145 8.902540 ATGCTTACAAATGGTCTAATCGATAA 57.097 30.769 0.00 0.00 0.00 1.75
145 146 8.138365 TGCTTACAAATGGTCTAATCGATAAC 57.862 34.615 0.00 0.00 0.00 1.89
146 147 7.766738 TGCTTACAAATGGTCTAATCGATAACA 59.233 33.333 0.00 0.00 0.00 2.41
147 148 8.609176 GCTTACAAATGGTCTAATCGATAACAA 58.391 33.333 0.00 0.00 0.00 2.83
150 151 8.506168 ACAAATGGTCTAATCGATAACAATGT 57.494 30.769 0.00 0.00 0.00 2.71
151 152 8.397906 ACAAATGGTCTAATCGATAACAATGTG 58.602 33.333 0.00 5.08 0.00 3.21
152 153 7.496529 AATGGTCTAATCGATAACAATGTGG 57.503 36.000 0.00 0.00 0.00 4.17
153 154 4.814234 TGGTCTAATCGATAACAATGTGGC 59.186 41.667 0.00 0.00 0.00 5.01
154 155 4.084537 GGTCTAATCGATAACAATGTGGCG 60.085 45.833 0.00 0.00 0.00 5.69
155 156 4.743151 GTCTAATCGATAACAATGTGGCGA 59.257 41.667 0.00 7.67 0.00 5.54
156 157 3.944422 AATCGATAACAATGTGGCGAC 57.056 42.857 0.00 0.00 0.00 5.19
157 158 2.371910 TCGATAACAATGTGGCGACA 57.628 45.000 3.31 3.31 36.22 4.35
177 178 3.434258 GCCAAAATTTAGGCCGGTG 57.566 52.632 1.90 0.00 45.18 4.94
178 179 0.108377 GCCAAAATTTAGGCCGGTGG 60.108 55.000 1.90 0.00 45.18 4.61
179 180 1.551452 CCAAAATTTAGGCCGGTGGA 58.449 50.000 1.90 0.00 0.00 4.02
180 181 1.203758 CCAAAATTTAGGCCGGTGGAC 59.796 52.381 1.90 0.00 0.00 4.02
181 182 1.203758 CAAAATTTAGGCCGGTGGACC 59.796 52.381 1.90 0.00 0.00 4.46
192 193 4.382320 GTGGACCGGCGCCTAACA 62.382 66.667 26.68 15.13 0.00 2.41
193 194 3.395702 TGGACCGGCGCCTAACAT 61.396 61.111 26.68 4.49 0.00 2.71
194 195 2.588034 GGACCGGCGCCTAACATC 60.588 66.667 26.68 13.74 0.00 3.06
195 196 2.960129 GACCGGCGCCTAACATCG 60.960 66.667 26.68 9.09 0.00 3.84
201 202 3.089784 CGCCTAACATCGCGCTTT 58.910 55.556 5.56 0.00 42.17 3.51
202 203 1.423845 CGCCTAACATCGCGCTTTT 59.576 52.632 5.56 0.00 42.17 2.27
203 204 0.857311 CGCCTAACATCGCGCTTTTG 60.857 55.000 5.56 2.38 42.17 2.44
204 205 0.168128 GCCTAACATCGCGCTTTTGT 59.832 50.000 5.56 3.11 0.00 2.83
205 206 1.882198 CCTAACATCGCGCTTTTGTG 58.118 50.000 5.56 0.00 0.00 3.33
206 207 1.463056 CCTAACATCGCGCTTTTGTGA 59.537 47.619 5.56 0.00 0.00 3.58
207 208 2.095969 CCTAACATCGCGCTTTTGTGAA 60.096 45.455 5.56 0.00 31.17 3.18
208 209 2.483583 AACATCGCGCTTTTGTGAAA 57.516 40.000 5.56 0.00 31.17 2.69
209 210 2.483583 ACATCGCGCTTTTGTGAAAA 57.516 40.000 5.56 0.00 31.17 2.29
260 261 8.928270 ATACATAAGCACTTATAATACGCTCC 57.072 34.615 2.68 0.00 34.27 4.70
261 262 6.994221 ACATAAGCACTTATAATACGCTCCT 58.006 36.000 2.68 0.00 34.27 3.69
262 263 8.118976 ACATAAGCACTTATAATACGCTCCTA 57.881 34.615 2.68 0.00 34.27 2.94
263 264 8.750298 ACATAAGCACTTATAATACGCTCCTAT 58.250 33.333 2.68 0.00 34.27 2.57
264 265 9.025020 CATAAGCACTTATAATACGCTCCTATG 57.975 37.037 2.68 6.24 34.27 2.23
265 266 6.835819 AGCACTTATAATACGCTCCTATGA 57.164 37.500 0.00 0.00 0.00 2.15
266 267 7.411486 AGCACTTATAATACGCTCCTATGAT 57.589 36.000 0.00 0.00 0.00 2.45
267 268 7.484975 AGCACTTATAATACGCTCCTATGATC 58.515 38.462 0.00 0.00 0.00 2.92
268 269 7.122799 AGCACTTATAATACGCTCCTATGATCA 59.877 37.037 0.00 0.00 0.00 2.92
269 270 7.221067 GCACTTATAATACGCTCCTATGATCAC 59.779 40.741 0.00 0.00 0.00 3.06
270 271 8.244113 CACTTATAATACGCTCCTATGATCACA 58.756 37.037 0.00 0.00 0.00 3.58
271 272 8.972127 ACTTATAATACGCTCCTATGATCACAT 58.028 33.333 0.00 0.00 40.16 3.21
274 275 6.590234 AATACGCTCCTATGATCACATACA 57.410 37.500 0.00 0.00 37.87 2.29
275 276 6.782082 ATACGCTCCTATGATCACATACAT 57.218 37.500 0.00 0.00 37.87 2.29
276 277 4.814147 ACGCTCCTATGATCACATACATG 58.186 43.478 0.00 0.00 37.87 3.21
277 278 3.615937 CGCTCCTATGATCACATACATGC 59.384 47.826 0.00 0.00 37.87 4.06
278 279 4.572909 GCTCCTATGATCACATACATGCA 58.427 43.478 0.00 0.00 37.87 3.96
279 280 4.391216 GCTCCTATGATCACATACATGCAC 59.609 45.833 0.00 0.00 37.87 4.57
280 281 5.544650 CTCCTATGATCACATACATGCACA 58.455 41.667 0.00 0.00 37.87 4.57
281 282 6.117975 TCCTATGATCACATACATGCACAT 57.882 37.500 0.00 0.00 37.87 3.21
282 283 6.168389 TCCTATGATCACATACATGCACATC 58.832 40.000 0.00 0.00 37.87 3.06
283 284 5.935789 CCTATGATCACATACATGCACATCA 59.064 40.000 0.00 0.00 37.87 3.07
284 285 6.598064 CCTATGATCACATACATGCACATCAT 59.402 38.462 0.00 12.31 37.87 2.45
285 286 7.767198 CCTATGATCACATACATGCACATCATA 59.233 37.037 0.00 12.90 37.87 2.15
286 287 9.326413 CTATGATCACATACATGCACATCATAT 57.674 33.333 0.00 0.00 35.31 1.78
287 288 7.605410 TGATCACATACATGCACATCATATC 57.395 36.000 0.00 0.00 33.19 1.63
288 289 6.596497 TGATCACATACATGCACATCATATCC 59.404 38.462 0.00 0.00 33.19 2.59
289 290 5.247862 TCACATACATGCACATCATATCCC 58.752 41.667 0.00 0.00 33.19 3.85
290 291 5.013391 TCACATACATGCACATCATATCCCT 59.987 40.000 0.00 0.00 33.19 4.20
291 292 6.213195 TCACATACATGCACATCATATCCCTA 59.787 38.462 0.00 0.00 33.19 3.53
292 293 7.052248 CACATACATGCACATCATATCCCTAT 58.948 38.462 0.00 0.00 33.19 2.57
293 294 7.012044 CACATACATGCACATCATATCCCTATG 59.988 40.741 0.00 0.00 36.79 2.23
294 295 5.767277 ACATGCACATCATATCCCTATGA 57.233 39.130 0.00 0.00 45.91 2.15
295 296 5.742063 ACATGCACATCATATCCCTATGAG 58.258 41.667 0.00 0.00 45.25 2.90
296 297 4.212143 TGCACATCATATCCCTATGAGC 57.788 45.455 0.00 0.00 45.25 4.26
297 298 3.583966 TGCACATCATATCCCTATGAGCA 59.416 43.478 0.00 0.00 45.25 4.26
298 299 4.226620 TGCACATCATATCCCTATGAGCAT 59.773 41.667 0.00 0.00 45.25 3.79
299 300 4.815308 GCACATCATATCCCTATGAGCATC 59.185 45.833 0.00 0.00 45.25 3.91
300 301 5.396548 GCACATCATATCCCTATGAGCATCT 60.397 44.000 0.00 0.00 45.25 2.90
301 302 6.651086 CACATCATATCCCTATGAGCATCTT 58.349 40.000 2.22 0.00 45.25 2.40
302 303 6.762187 CACATCATATCCCTATGAGCATCTTC 59.238 42.308 2.22 0.00 45.25 2.87
303 304 6.442885 ACATCATATCCCTATGAGCATCTTCA 59.557 38.462 2.22 0.00 45.25 3.02
304 305 6.940430 TCATATCCCTATGAGCATCTTCAA 57.060 37.500 0.00 0.00 39.03 2.69
305 306 6.944096 TCATATCCCTATGAGCATCTTCAAG 58.056 40.000 0.00 0.00 39.03 3.02
306 307 6.727697 TCATATCCCTATGAGCATCTTCAAGA 59.272 38.462 0.00 0.00 39.03 3.02
307 308 4.952071 TCCCTATGAGCATCTTCAAGAG 57.048 45.455 0.00 0.00 34.92 2.85
308 309 4.550669 TCCCTATGAGCATCTTCAAGAGA 58.449 43.478 0.00 0.00 39.13 3.10
309 310 4.343526 TCCCTATGAGCATCTTCAAGAGAC 59.656 45.833 0.00 0.00 37.17 3.36
310 311 4.344679 CCCTATGAGCATCTTCAAGAGACT 59.655 45.833 0.00 0.00 37.17 3.24
311 312 5.538053 CCCTATGAGCATCTTCAAGAGACTA 59.462 44.000 0.00 0.00 37.17 2.59
312 313 6.041409 CCCTATGAGCATCTTCAAGAGACTAA 59.959 42.308 0.00 0.00 37.17 2.24
313 314 7.147312 CCTATGAGCATCTTCAAGAGACTAAG 58.853 42.308 0.00 0.00 37.17 2.18
314 315 4.753233 TGAGCATCTTCAAGAGACTAAGC 58.247 43.478 0.00 0.00 37.17 3.09
315 316 4.119136 GAGCATCTTCAAGAGACTAAGCC 58.881 47.826 0.00 0.00 37.17 4.35
316 317 2.863137 GCATCTTCAAGAGACTAAGCCG 59.137 50.000 0.00 0.00 37.17 5.52
317 318 3.452474 CATCTTCAAGAGACTAAGCCGG 58.548 50.000 0.00 0.00 37.17 6.13
318 319 1.204941 TCTTCAAGAGACTAAGCCGGC 59.795 52.381 21.89 21.89 0.00 6.13
319 320 0.973632 TTCAAGAGACTAAGCCGGCA 59.026 50.000 31.54 7.98 0.00 5.69
320 321 1.195115 TCAAGAGACTAAGCCGGCAT 58.805 50.000 31.54 21.32 0.00 4.40
321 322 2.384828 TCAAGAGACTAAGCCGGCATA 58.615 47.619 31.54 21.29 0.00 3.14
322 323 2.965831 TCAAGAGACTAAGCCGGCATAT 59.034 45.455 31.54 17.05 0.00 1.78
323 324 3.005897 TCAAGAGACTAAGCCGGCATATC 59.994 47.826 31.54 19.70 0.00 1.63
324 325 1.542030 AGAGACTAAGCCGGCATATCG 59.458 52.381 31.54 12.89 0.00 2.92
325 326 0.038159 AGACTAAGCCGGCATATCGC 60.038 55.000 31.54 13.13 41.28 4.58
334 335 3.449042 GCATATCGCCGTAGACGC 58.551 61.111 0.00 0.00 38.18 5.19
335 336 2.087009 GCATATCGCCGTAGACGCC 61.087 63.158 0.00 0.00 38.18 5.68
336 337 1.579932 CATATCGCCGTAGACGCCT 59.420 57.895 0.00 0.00 38.18 5.52
337 338 0.454620 CATATCGCCGTAGACGCCTC 60.455 60.000 0.00 0.00 38.18 4.70
338 339 1.909141 ATATCGCCGTAGACGCCTCG 61.909 60.000 0.00 0.41 38.18 4.63
340 341 3.566853 CGCCGTAGACGCCTCGTA 61.567 66.667 0.00 0.00 41.37 3.43
341 342 2.327244 GCCGTAGACGCCTCGTAG 59.673 66.667 0.00 0.00 41.37 3.51
342 343 2.467826 GCCGTAGACGCCTCGTAGT 61.468 63.158 0.00 0.00 41.37 2.73
343 344 1.640604 CCGTAGACGCCTCGTAGTC 59.359 63.158 0.00 0.00 41.37 2.59
344 345 1.272131 CGTAGACGCCTCGTAGTCG 59.728 63.158 0.00 0.00 41.37 4.18
345 346 1.142185 CGTAGACGCCTCGTAGTCGA 61.142 60.000 0.00 0.00 41.37 4.20
346 347 0.300193 GTAGACGCCTCGTAGTCGAC 59.700 60.000 7.70 7.70 41.37 4.20
365 366 3.950869 GGGAACGCCTCCTTTTACT 57.049 52.632 4.28 0.00 44.68 2.24
367 368 3.339253 GGGAACGCCTCCTTTTACTAA 57.661 47.619 4.28 0.00 44.68 2.24
368 369 3.005554 GGGAACGCCTCCTTTTACTAAC 58.994 50.000 4.28 0.00 44.68 2.34
369 370 2.669924 GGAACGCCTCCTTTTACTAACG 59.330 50.000 0.00 0.00 41.61 3.18
370 371 1.718396 ACGCCTCCTTTTACTAACGC 58.282 50.000 0.00 0.00 0.00 4.84
371 372 0.643820 CGCCTCCTTTTACTAACGCG 59.356 55.000 3.53 3.53 0.00 6.01
372 373 0.372679 GCCTCCTTTTACTAACGCGC 59.627 55.000 5.73 0.00 0.00 6.86
373 374 1.717194 CCTCCTTTTACTAACGCGCA 58.283 50.000 5.73 0.00 0.00 6.09
374 375 2.277084 CCTCCTTTTACTAACGCGCAT 58.723 47.619 5.73 0.00 0.00 4.73
375 376 2.284417 CCTCCTTTTACTAACGCGCATC 59.716 50.000 5.73 0.00 0.00 3.91
376 377 2.927477 CTCCTTTTACTAACGCGCATCA 59.073 45.455 5.73 0.00 0.00 3.07
377 378 3.527533 TCCTTTTACTAACGCGCATCAT 58.472 40.909 5.73 0.00 0.00 2.45
378 379 3.554324 TCCTTTTACTAACGCGCATCATC 59.446 43.478 5.73 0.00 0.00 2.92
379 380 3.522362 CTTTTACTAACGCGCATCATCG 58.478 45.455 5.73 0.00 0.00 3.84
380 381 2.478547 TTACTAACGCGCATCATCGA 57.521 45.000 5.73 0.00 0.00 3.59
381 382 2.478547 TACTAACGCGCATCATCGAA 57.521 45.000 5.73 0.00 0.00 3.71
382 383 1.635844 ACTAACGCGCATCATCGAAA 58.364 45.000 5.73 0.00 0.00 3.46
383 384 1.996898 ACTAACGCGCATCATCGAAAA 59.003 42.857 5.73 0.00 0.00 2.29
384 385 2.607635 ACTAACGCGCATCATCGAAAAT 59.392 40.909 5.73 0.00 0.00 1.82
385 386 2.091152 AACGCGCATCATCGAAAATC 57.909 45.000 5.73 0.00 0.00 2.17
386 387 1.290203 ACGCGCATCATCGAAAATCT 58.710 45.000 5.73 0.00 0.00 2.40
387 388 2.469826 ACGCGCATCATCGAAAATCTA 58.530 42.857 5.73 0.00 0.00 1.98
388 389 2.863740 ACGCGCATCATCGAAAATCTAA 59.136 40.909 5.73 0.00 0.00 2.10
389 390 3.308595 ACGCGCATCATCGAAAATCTAAA 59.691 39.130 5.73 0.00 0.00 1.85
390 391 4.201773 ACGCGCATCATCGAAAATCTAAAA 60.202 37.500 5.73 0.00 0.00 1.52
391 392 4.728131 CGCGCATCATCGAAAATCTAAAAA 59.272 37.500 8.75 0.00 0.00 1.94
416 417 7.853377 AAAAAGCGAGCACTAAAAATTACTC 57.147 32.000 0.00 0.00 0.00 2.59
417 418 5.547181 AAGCGAGCACTAAAAATTACTCC 57.453 39.130 0.00 0.00 0.00 3.85
418 419 3.939592 AGCGAGCACTAAAAATTACTCCC 59.060 43.478 0.00 0.00 0.00 4.30
419 420 3.939592 GCGAGCACTAAAAATTACTCCCT 59.060 43.478 0.00 0.00 0.00 4.20
420 421 4.395231 GCGAGCACTAAAAATTACTCCCTT 59.605 41.667 0.00 0.00 0.00 3.95
421 422 5.447413 GCGAGCACTAAAAATTACTCCCTTC 60.447 44.000 0.00 0.00 0.00 3.46
422 423 5.220416 CGAGCACTAAAAATTACTCCCTTCG 60.220 44.000 0.00 0.00 0.00 3.79
423 424 4.395231 AGCACTAAAAATTACTCCCTTCGC 59.605 41.667 0.00 0.00 0.00 4.70
424 425 4.438336 GCACTAAAAATTACTCCCTTCGCC 60.438 45.833 0.00 0.00 0.00 5.54
425 426 4.095932 CACTAAAAATTACTCCCTTCGCCC 59.904 45.833 0.00 0.00 0.00 6.13
426 427 1.746470 AAAATTACTCCCTTCGCCCG 58.254 50.000 0.00 0.00 0.00 6.13
427 428 0.906775 AAATTACTCCCTTCGCCCGA 59.093 50.000 0.00 0.00 0.00 5.14
428 429 0.906775 AATTACTCCCTTCGCCCGAA 59.093 50.000 2.92 2.92 0.00 4.30
429 430 0.906775 ATTACTCCCTTCGCCCGAAA 59.093 50.000 4.58 0.00 33.34 3.46
430 431 0.686224 TTACTCCCTTCGCCCGAAAA 59.314 50.000 4.58 0.00 33.34 2.29
431 432 0.906775 TACTCCCTTCGCCCGAAAAT 59.093 50.000 4.58 0.00 33.34 1.82
432 433 0.906775 ACTCCCTTCGCCCGAAAATA 59.093 50.000 4.58 0.00 33.34 1.40
433 434 1.489230 ACTCCCTTCGCCCGAAAATAT 59.511 47.619 4.58 0.00 33.34 1.28
434 435 2.701951 ACTCCCTTCGCCCGAAAATATA 59.298 45.455 4.58 0.00 33.34 0.86
435 436 3.064931 CTCCCTTCGCCCGAAAATATAC 58.935 50.000 4.58 0.00 33.34 1.47
436 437 2.701951 TCCCTTCGCCCGAAAATATACT 59.298 45.455 4.58 0.00 33.34 2.12
437 438 3.135167 TCCCTTCGCCCGAAAATATACTT 59.865 43.478 4.58 0.00 33.34 2.24
438 439 3.250040 CCCTTCGCCCGAAAATATACTTG 59.750 47.826 4.58 0.00 33.34 3.16
439 440 3.875134 CCTTCGCCCGAAAATATACTTGT 59.125 43.478 4.58 0.00 33.34 3.16
440 441 4.025145 CCTTCGCCCGAAAATATACTTGTC 60.025 45.833 4.58 0.00 33.34 3.18
441 442 4.126208 TCGCCCGAAAATATACTTGTCA 57.874 40.909 0.00 0.00 0.00 3.58
442 443 4.699637 TCGCCCGAAAATATACTTGTCAT 58.300 39.130 0.00 0.00 0.00 3.06
443 444 4.748102 TCGCCCGAAAATATACTTGTCATC 59.252 41.667 0.00 0.00 0.00 2.92
444 445 4.509970 CGCCCGAAAATATACTTGTCATCA 59.490 41.667 0.00 0.00 0.00 3.07
445 446 5.007234 CGCCCGAAAATATACTTGTCATCAA 59.993 40.000 0.00 0.00 0.00 2.57
446 447 6.457663 CGCCCGAAAATATACTTGTCATCAAA 60.458 38.462 0.00 0.00 32.87 2.69
447 448 7.254852 GCCCGAAAATATACTTGTCATCAAAA 58.745 34.615 0.00 0.00 32.87 2.44
448 449 7.920682 GCCCGAAAATATACTTGTCATCAAAAT 59.079 33.333 0.00 0.00 32.87 1.82
449 450 9.236691 CCCGAAAATATACTTGTCATCAAAATG 57.763 33.333 0.00 0.00 32.87 2.32
450 451 9.236691 CCGAAAATATACTTGTCATCAAAATGG 57.763 33.333 0.00 0.00 33.42 3.16
530 531 9.958234 TCGATTTTCATGACAAGTATTTTCAAA 57.042 25.926 0.00 0.00 0.00 2.69
531 532 9.993881 CGATTTTCATGACAAGTATTTTCAAAC 57.006 29.630 0.00 0.00 0.00 2.93
532 533 9.993881 GATTTTCATGACAAGTATTTTCAAACG 57.006 29.630 0.00 0.00 0.00 3.60
533 534 9.743057 ATTTTCATGACAAGTATTTTCAAACGA 57.257 25.926 0.00 0.00 0.00 3.85
534 535 9.574458 TTTTCATGACAAGTATTTTCAAACGAA 57.426 25.926 0.00 0.00 0.00 3.85
535 536 8.555166 TTCATGACAAGTATTTTCAAACGAAC 57.445 30.769 0.00 0.00 0.00 3.95
536 537 6.848800 TCATGACAAGTATTTTCAAACGAACG 59.151 34.615 0.00 0.00 0.00 3.95
537 538 5.503498 TGACAAGTATTTTCAAACGAACGG 58.497 37.500 0.00 0.00 0.00 4.44
538 539 5.293814 TGACAAGTATTTTCAAACGAACGGA 59.706 36.000 0.00 0.00 0.00 4.69
539 540 5.744490 ACAAGTATTTTCAAACGAACGGAG 58.256 37.500 0.00 0.00 0.00 4.63
541 542 6.479660 ACAAGTATTTTCAAACGAACGGAGTA 59.520 34.615 0.00 0.00 45.00 2.59
542 543 6.457851 AGTATTTTCAAACGAACGGAGTAC 57.542 37.500 0.00 0.00 45.00 2.73
543 544 6.218746 AGTATTTTCAAACGAACGGAGTACT 58.781 36.000 0.00 0.00 45.00 2.73
544 545 5.996669 ATTTTCAAACGAACGGAGTACTT 57.003 34.783 0.00 0.00 45.00 2.24
545 546 5.393902 TTTTCAAACGAACGGAGTACTTC 57.606 39.130 0.00 0.00 45.00 3.01
546 547 2.653890 TCAAACGAACGGAGTACTTCG 58.346 47.619 22.13 22.13 45.00 3.79
547 548 1.123756 CAAACGAACGGAGTACTTCGC 59.876 52.381 23.58 7.29 45.00 4.70
548 549 0.595095 AACGAACGGAGTACTTCGCT 59.405 50.000 23.58 11.86 45.00 4.93
549 550 1.442769 ACGAACGGAGTACTTCGCTA 58.557 50.000 23.58 0.00 45.00 4.26
550 551 1.396301 ACGAACGGAGTACTTCGCTAG 59.604 52.381 23.58 14.14 45.00 3.42
551 552 1.662629 CGAACGGAGTACTTCGCTAGA 59.337 52.381 23.58 0.00 45.00 2.43
552 553 2.536529 CGAACGGAGTACTTCGCTAGAC 60.537 54.545 23.58 9.27 45.00 2.59
553 554 2.399916 ACGGAGTACTTCGCTAGACT 57.600 50.000 23.58 0.00 41.94 3.24
554 555 2.278854 ACGGAGTACTTCGCTAGACTC 58.721 52.381 23.58 0.00 41.94 3.36
555 556 2.277969 CGGAGTACTTCGCTAGACTCA 58.722 52.381 11.35 0.00 40.10 3.41
556 557 2.285756 CGGAGTACTTCGCTAGACTCAG 59.714 54.545 11.35 2.18 40.10 3.35
557 558 3.533547 GGAGTACTTCGCTAGACTCAGA 58.466 50.000 0.00 0.00 40.10 3.27
558 559 4.131596 GGAGTACTTCGCTAGACTCAGAT 58.868 47.826 0.00 0.00 40.10 2.90
559 560 5.299148 GGAGTACTTCGCTAGACTCAGATA 58.701 45.833 0.00 0.00 40.10 1.98
560 561 5.178067 GGAGTACTTCGCTAGACTCAGATAC 59.822 48.000 0.00 0.00 40.10 2.24
561 562 5.058490 AGTACTTCGCTAGACTCAGATACC 58.942 45.833 0.00 0.00 0.00 2.73
562 563 3.887352 ACTTCGCTAGACTCAGATACCA 58.113 45.455 0.00 0.00 0.00 3.25
563 564 3.628487 ACTTCGCTAGACTCAGATACCAC 59.372 47.826 0.00 0.00 0.00 4.16
564 565 3.562343 TCGCTAGACTCAGATACCACT 57.438 47.619 0.00 0.00 0.00 4.00
565 566 3.206964 TCGCTAGACTCAGATACCACTG 58.793 50.000 0.00 0.00 39.02 3.66
566 567 2.946329 CGCTAGACTCAGATACCACTGT 59.054 50.000 0.00 0.00 38.79 3.55
567 568 3.002862 CGCTAGACTCAGATACCACTGTC 59.997 52.174 0.00 0.00 38.79 3.51
568 569 3.316868 GCTAGACTCAGATACCACTGTCC 59.683 52.174 0.00 0.00 38.79 4.02
569 570 3.748645 AGACTCAGATACCACTGTCCT 57.251 47.619 0.00 0.00 38.79 3.85
570 571 4.864483 AGACTCAGATACCACTGTCCTA 57.136 45.455 0.00 0.00 38.79 2.94
571 572 4.528920 AGACTCAGATACCACTGTCCTAC 58.471 47.826 0.00 0.00 38.79 3.18
572 573 4.228666 AGACTCAGATACCACTGTCCTACT 59.771 45.833 0.00 0.00 38.79 2.57
573 574 5.429109 AGACTCAGATACCACTGTCCTACTA 59.571 44.000 0.00 0.00 38.79 1.82
574 575 6.069556 AGACTCAGATACCACTGTCCTACTAA 60.070 42.308 0.00 0.00 38.79 2.24
575 576 5.887035 ACTCAGATACCACTGTCCTACTAAC 59.113 44.000 0.00 0.00 38.79 2.34
576 577 5.198965 TCAGATACCACTGTCCTACTAACC 58.801 45.833 0.00 0.00 38.79 2.85
577 578 4.954202 CAGATACCACTGTCCTACTAACCA 59.046 45.833 0.00 0.00 33.73 3.67
578 579 5.598830 CAGATACCACTGTCCTACTAACCAT 59.401 44.000 0.00 0.00 33.73 3.55
579 580 6.098409 CAGATACCACTGTCCTACTAACCATT 59.902 42.308 0.00 0.00 33.73 3.16
580 581 4.820894 ACCACTGTCCTACTAACCATTC 57.179 45.455 0.00 0.00 0.00 2.67
581 582 4.164981 ACCACTGTCCTACTAACCATTCA 58.835 43.478 0.00 0.00 0.00 2.57
582 583 4.595781 ACCACTGTCCTACTAACCATTCAA 59.404 41.667 0.00 0.00 0.00 2.69
583 584 4.935808 CCACTGTCCTACTAACCATTCAAC 59.064 45.833 0.00 0.00 0.00 3.18
584 585 4.935808 CACTGTCCTACTAACCATTCAACC 59.064 45.833 0.00 0.00 0.00 3.77
585 586 4.844655 ACTGTCCTACTAACCATTCAACCT 59.155 41.667 0.00 0.00 0.00 3.50
586 587 5.309806 ACTGTCCTACTAACCATTCAACCTT 59.690 40.000 0.00 0.00 0.00 3.50
587 588 5.556915 TGTCCTACTAACCATTCAACCTTG 58.443 41.667 0.00 0.00 0.00 3.61
588 589 4.395231 GTCCTACTAACCATTCAACCTTGC 59.605 45.833 0.00 0.00 0.00 4.01
589 590 4.288626 TCCTACTAACCATTCAACCTTGCT 59.711 41.667 0.00 0.00 0.00 3.91
590 591 4.636206 CCTACTAACCATTCAACCTTGCTC 59.364 45.833 0.00 0.00 0.00 4.26
591 592 4.098914 ACTAACCATTCAACCTTGCTCA 57.901 40.909 0.00 0.00 0.00 4.26
592 593 4.469657 ACTAACCATTCAACCTTGCTCAA 58.530 39.130 0.00 0.00 0.00 3.02
593 594 4.892934 ACTAACCATTCAACCTTGCTCAAA 59.107 37.500 0.00 0.00 0.00 2.69
594 595 4.751767 AACCATTCAACCTTGCTCAAAA 57.248 36.364 0.00 0.00 0.00 2.44
595 596 4.751767 ACCATTCAACCTTGCTCAAAAA 57.248 36.364 0.00 0.00 0.00 1.94
628 629 6.662865 TTCAACCTTGAAGCCAATATTGAA 57.337 33.333 17.23 1.93 41.88 2.69
629 630 6.662865 TCAACCTTGAAGCCAATATTGAAA 57.337 33.333 17.23 2.89 35.18 2.69
630 631 6.690530 TCAACCTTGAAGCCAATATTGAAAG 58.309 36.000 17.23 11.03 35.18 2.62
631 632 5.077134 ACCTTGAAGCCAATATTGAAAGC 57.923 39.130 17.23 11.53 0.00 3.51
632 633 4.081476 ACCTTGAAGCCAATATTGAAAGCC 60.081 41.667 17.23 3.02 0.00 4.35
633 634 4.436332 CTTGAAGCCAATATTGAAAGCCC 58.564 43.478 17.23 7.42 0.00 5.19
634 635 2.765699 TGAAGCCAATATTGAAAGCCCC 59.234 45.455 17.23 7.11 0.00 5.80
635 636 2.548464 AGCCAATATTGAAAGCCCCA 57.452 45.000 17.23 0.00 0.00 4.96
636 637 2.831565 AGCCAATATTGAAAGCCCCAA 58.168 42.857 17.23 0.00 0.00 4.12
637 638 3.387012 AGCCAATATTGAAAGCCCCAAT 58.613 40.909 17.23 0.00 37.86 3.16
638 639 3.781965 AGCCAATATTGAAAGCCCCAATT 59.218 39.130 17.23 0.00 35.94 2.32
639 640 4.227982 AGCCAATATTGAAAGCCCCAATTT 59.772 37.500 17.23 0.00 35.94 1.82
640 641 4.949238 GCCAATATTGAAAGCCCCAATTTT 59.051 37.500 17.23 0.00 35.94 1.82
641 642 5.163632 GCCAATATTGAAAGCCCCAATTTTG 60.164 40.000 17.23 13.97 39.94 2.44
642 643 6.179040 CCAATATTGAAAGCCCCAATTTTGA 58.821 36.000 17.23 0.02 41.30 2.69
643 644 6.316890 CCAATATTGAAAGCCCCAATTTTGAG 59.683 38.462 17.23 10.76 41.30 3.02
644 645 6.872585 ATATTGAAAGCCCCAATTTTGAGA 57.127 33.333 0.00 0.00 35.94 3.27
645 646 5.565455 ATTGAAAGCCCCAATTTTGAGAA 57.435 34.783 0.00 0.00 30.72 2.87
646 647 4.605640 TGAAAGCCCCAATTTTGAGAAG 57.394 40.909 0.00 0.00 0.00 2.85
647 648 3.244181 TGAAAGCCCCAATTTTGAGAAGC 60.244 43.478 0.00 0.00 0.00 3.86
648 649 1.269958 AGCCCCAATTTTGAGAAGCC 58.730 50.000 0.00 0.00 0.00 4.35
649 650 0.975887 GCCCCAATTTTGAGAAGCCA 59.024 50.000 0.00 0.00 0.00 4.75
650 651 1.066645 GCCCCAATTTTGAGAAGCCAG 60.067 52.381 0.00 0.00 0.00 4.85
657 658 6.204359 CCAATTTTGAGAAGCCAGATATTCG 58.796 40.000 0.00 0.00 0.00 3.34
853 866 4.754667 GGGACACCGCGTTCCTCC 62.755 72.222 15.78 9.09 40.69 4.30
934 947 0.034616 CCTCATCCAGCGATTCTCCC 59.965 60.000 0.00 0.00 0.00 4.30
955 968 1.630878 AGTCAAATCCCCACTGACCTC 59.369 52.381 0.00 0.00 40.29 3.85
995 1008 3.285215 TCTAGATCCGCCGCCGAC 61.285 66.667 0.00 0.00 36.29 4.79
1078 1091 2.517450 CCGCAGATCGCCGAGAAAC 61.517 63.158 9.21 0.00 37.30 2.78
1087 1100 1.971695 GCCGAGAAACCCCAGGTTG 60.972 63.158 0.00 0.00 46.20 3.77
1097 1110 1.250840 CCCCAGGTTGGTTAGCAAGC 61.251 60.000 17.09 17.09 35.17 4.01
1110 1123 3.423154 CAAGCGCTTCGGGTCACC 61.423 66.667 22.21 0.00 0.00 4.02
1143 1156 2.124277 TCTCATGCTTGCTTGCTGAT 57.876 45.000 3.96 0.00 0.00 2.90
1293 1306 3.672503 GGGGGTGCCAAGGTGGAT 61.673 66.667 0.00 0.00 40.96 3.41
1299 1312 1.341383 GGTGCCAAGGTGGATGAGAAT 60.341 52.381 0.00 0.00 40.96 2.40
1301 1314 1.355381 TGCCAAGGTGGATGAGAATGT 59.645 47.619 0.00 0.00 40.96 2.71
1305 1318 1.293062 AGGTGGATGAGAATGTGCCT 58.707 50.000 0.00 0.00 0.00 4.75
1308 1321 0.904649 TGGATGAGAATGTGCCTCGT 59.095 50.000 0.00 0.00 33.51 4.18
1311 1324 3.895041 TGGATGAGAATGTGCCTCGTATA 59.105 43.478 0.00 0.00 33.51 1.47
1416 1429 1.163554 AGTCGTCGTACCTGAAGTCC 58.836 55.000 0.00 0.00 0.00 3.85
1455 1468 4.778415 CTCGGGTGCAGTCGGTCG 62.778 72.222 8.48 0.00 0.00 4.79
1528 1541 4.365505 GCCCGGCTAGGATCTCGC 62.366 72.222 0.71 0.00 45.00 5.03
1560 1573 0.326264 AGGACAGGTGGCTTCACATC 59.674 55.000 0.00 0.00 42.91 3.06
1605 1618 1.949847 ATCCGCTCAACCAGTCCTCG 61.950 60.000 0.00 0.00 0.00 4.63
1842 1855 1.815817 ATTTGGACAAACAGGGGCGC 61.816 55.000 0.00 0.00 32.51 6.53
1925 1938 8.465999 TCATGATGTTGTTTACTTTGACACTTT 58.534 29.630 0.00 0.00 0.00 2.66
1938 1951 8.366671 ACTTTGACACTTTATACTTGACTGAC 57.633 34.615 0.00 0.00 0.00 3.51
2001 2014 1.047801 ATGGCCACCCTGTTTTGTTC 58.952 50.000 8.16 0.00 0.00 3.18
2019 2032 0.669318 TCGGTACTGGCTTGCTTTCG 60.669 55.000 0.85 0.00 0.00 3.46
2022 2035 0.796927 GTACTGGCTTGCTTTCGGAC 59.203 55.000 0.00 0.00 0.00 4.79
2118 2131 2.048503 ACCGAGCACTACAACGCC 60.049 61.111 0.00 0.00 0.00 5.68
2220 2233 1.205064 CTTGAAAGCACACGCGGAG 59.795 57.895 12.47 4.93 45.49 4.63
2577 2590 3.181461 CCCATAGGACTCCATTGACTGTC 60.181 52.174 0.00 0.00 33.47 3.51
3021 3034 0.747852 TGTCTACACAGTGCCGTCAA 59.252 50.000 0.00 0.00 0.00 3.18
3090 3103 5.182950 TCTGAAGTTACTGAGAGAAGCAGAG 59.817 44.000 0.00 0.00 36.86 3.35
3371 3384 2.161410 GCATTCATACGTCAGTTTGCCA 59.839 45.455 0.00 0.00 30.83 4.92
3382 3395 5.235305 GTCAGTTTGCCATATGACGAAAT 57.765 39.130 3.65 0.00 33.42 2.17
3448 3461 4.232221 GTCATCATTTGTGCCAACTGAAG 58.768 43.478 10.44 7.63 0.00 3.02
3721 3734 4.126437 ACAACTTTATGCAGGTTTTTGCC 58.874 39.130 0.00 0.00 43.43 4.52
3745 3758 8.954350 GCCATGCACAGATCTTTATAATATTCT 58.046 33.333 0.00 0.00 0.00 2.40
3921 3934 2.969821 AATCAGTGGGCTTACAACCA 57.030 45.000 0.00 0.00 0.00 3.67
4103 4120 7.484993 TTTCATCAATCAATGGACCTTTCAT 57.515 32.000 0.00 0.00 0.00 2.57
4135 4152 5.001232 GGATTACTGGTAGCAAGACAAACA 58.999 41.667 0.00 0.00 0.00 2.83
4186 4203 3.307059 CCACTCGTTCAGGGATTCTCTTT 60.307 47.826 0.00 0.00 0.00 2.52
4309 4326 1.154430 AAAAACTACTGCCCTCCCCA 58.846 50.000 0.00 0.00 0.00 4.96
4321 4338 3.012959 TGCCCTCCCCATTTTACCATTTA 59.987 43.478 0.00 0.00 0.00 1.40
4395 4418 5.957771 ATCCAATGCTAAGAACTCCTACA 57.042 39.130 0.00 0.00 0.00 2.74
4412 4435 1.853963 ACACGAAGAGCAGGGTAGAT 58.146 50.000 0.00 0.00 0.00 1.98
4414 4437 2.093973 ACACGAAGAGCAGGGTAGATTG 60.094 50.000 0.00 0.00 0.00 2.67
4428 4451 5.189736 AGGGTAGATTGTGTTCATTGCTCTA 59.810 40.000 0.00 0.00 0.00 2.43
4484 4507 5.584649 TGTTTCTCCAAATCCATCGTATCAC 59.415 40.000 0.00 0.00 0.00 3.06
4509 4532 6.249260 CGCTTTTGACATGTTCTTAATGTAGC 59.751 38.462 0.00 0.00 38.37 3.58
4525 4548 9.317936 CTTAATGTAGCTGTGAACTTATGATCA 57.682 33.333 0.00 0.00 0.00 2.92
4701 4728 9.593134 GTCACCATCCATATATTCTCTTGATAC 57.407 37.037 0.00 0.00 0.00 2.24
4702 4729 8.762645 TCACCATCCATATATTCTCTTGATACC 58.237 37.037 0.00 0.00 0.00 2.73
4704 4731 6.703607 CCATCCATATATTCTCTTGATACCGC 59.296 42.308 0.00 0.00 0.00 5.68
4708 4735 6.533012 CCATATATTCTCTTGATACCGCAGTG 59.467 42.308 0.00 0.00 0.00 3.66
4728 4755 6.975772 GCAGTGTCTTTCTGTAGATACTAAGG 59.024 42.308 9.94 3.24 42.49 2.69
4734 4761 9.953697 GTCTTTCTGTAGATACTAAGGTACATG 57.046 37.037 0.00 0.00 0.00 3.21
4735 4762 9.916360 TCTTTCTGTAGATACTAAGGTACATGA 57.084 33.333 0.00 0.00 0.00 3.07
4738 4765 9.696572 TTCTGTAGATACTAAGGTACATGAAGT 57.303 33.333 0.00 0.00 0.00 3.01
4739 4766 9.696572 TCTGTAGATACTAAGGTACATGAAGTT 57.303 33.333 0.00 0.00 0.00 2.66
4740 4767 9.953697 CTGTAGATACTAAGGTACATGAAGTTC 57.046 37.037 0.00 0.00 0.00 3.01
4744 4771 9.823647 AGATACTAAGGTACATGAAGTTCATTG 57.176 33.333 15.85 13.20 34.28 2.82
4746 4773 6.237901 ACTAAGGTACATGAAGTTCATTGCA 58.762 36.000 15.85 1.49 34.28 4.08
4748 4775 5.824904 AGGTACATGAAGTTCATTGCATC 57.175 39.130 15.85 4.69 34.28 3.91
4749 4776 4.641989 AGGTACATGAAGTTCATTGCATCC 59.358 41.667 15.85 12.99 34.28 3.51
4750 4777 4.202050 GGTACATGAAGTTCATTGCATCCC 60.202 45.833 15.85 6.78 34.28 3.85
4751 4778 2.762327 ACATGAAGTTCATTGCATCCCC 59.238 45.455 15.85 0.00 34.28 4.81
4752 4779 1.851304 TGAAGTTCATTGCATCCCCC 58.149 50.000 0.08 0.00 0.00 5.40
4783 4810 8.704668 AGAAGGACCTTGTTATTGATTTTTGTT 58.295 29.630 12.68 0.00 0.00 2.83
4800 4827 3.173953 TGTTTCTGGCTTGGGATTGAT 57.826 42.857 0.00 0.00 0.00 2.57
4860 4887 2.696526 TGTGAAGTGGGGAGTAGAGT 57.303 50.000 0.00 0.00 0.00 3.24
4862 4889 4.122337 TGTGAAGTGGGGAGTAGAGTTA 57.878 45.455 0.00 0.00 0.00 2.24
4863 4890 4.087182 TGTGAAGTGGGGAGTAGAGTTAG 58.913 47.826 0.00 0.00 0.00 2.34
4865 4892 4.158209 GTGAAGTGGGGAGTAGAGTTAGTC 59.842 50.000 0.00 0.00 0.00 2.59
4866 4893 3.002038 AGTGGGGAGTAGAGTTAGTCG 57.998 52.381 0.00 0.00 31.18 4.18
4899 4934 5.920273 TCGACTTAGGGTAACAAACTTTACG 59.080 40.000 0.00 0.00 33.42 3.18
4903 4938 8.763049 ACTTAGGGTAACAAACTTTACGTATC 57.237 34.615 0.00 0.00 33.42 2.24
4909 4944 7.599998 GGGTAACAAACTTTACGTATCTGAAGA 59.400 37.037 10.86 0.00 33.42 2.87
4911 4946 8.971321 GTAACAAACTTTACGTATCTGAAGACA 58.029 33.333 10.86 0.00 0.00 3.41
4912 4947 7.404139 ACAAACTTTACGTATCTGAAGACAC 57.596 36.000 10.86 0.00 0.00 3.67
4975 5011 6.857777 AAAAGAATCCGAGAATCAGCATAG 57.142 37.500 0.00 0.00 33.17 2.23
4978 5014 5.782047 AGAATCCGAGAATCAGCATAGAAG 58.218 41.667 0.00 0.00 33.17 2.85
5002 5038 4.162509 GTGGCAAATCTAGGGAAGTACTCT 59.837 45.833 0.00 0.00 0.00 3.24
5012 5048 2.356535 GGGAAGTACTCTCTCCGTACCA 60.357 54.545 0.00 0.00 38.34 3.25
5045 5081 8.648557 TGATGTATCTAGACATGTTTTAGTGC 57.351 34.615 0.00 2.10 40.18 4.40
5077 5113 5.839621 TCCGTATGTAGACAAATCTAAGGC 58.160 41.667 0.00 0.00 39.20 4.35
5093 5129 1.153647 GGCAACTAATTTGGGGCGC 60.154 57.895 0.00 0.00 35.51 6.53
5095 5131 0.175531 GCAACTAATTTGGGGCGCAT 59.824 50.000 10.83 0.00 35.51 4.73
5096 5132 1.407258 GCAACTAATTTGGGGCGCATA 59.593 47.619 10.83 0.05 35.51 3.14
5098 5134 3.492482 GCAACTAATTTGGGGCGCATATT 60.492 43.478 20.33 20.33 35.51 1.28
5100 5136 5.219633 CAACTAATTTGGGGCGCATATTAC 58.780 41.667 18.64 0.00 0.00 1.89
5102 5138 4.518970 ACTAATTTGGGGCGCATATTACAG 59.481 41.667 18.64 15.45 0.00 2.74
5103 5139 2.719531 TTTGGGGCGCATATTACAGA 57.280 45.000 10.83 0.00 0.00 3.41
5104 5140 1.961793 TTGGGGCGCATATTACAGAC 58.038 50.000 10.83 0.00 0.00 3.51
5105 5141 1.128200 TGGGGCGCATATTACAGACT 58.872 50.000 10.83 0.00 0.00 3.24
5126 5162 1.545841 ACAGAGTACGTGGATGCTGA 58.454 50.000 0.00 0.00 0.00 4.26
5224 5260 7.917505 GGCAGTTCACAGATCTTTTTATTATGG 59.082 37.037 0.00 0.00 0.00 2.74
5225 5261 7.433425 GCAGTTCACAGATCTTTTTATTATGGC 59.567 37.037 0.00 0.00 0.00 4.40
5257 5296 3.305335 GCTAGTGCTATCTCTTCTGCTCC 60.305 52.174 0.00 0.00 36.03 4.70
5263 5302 0.326427 ATCTCTTCTGCTCCCCTGCT 60.326 55.000 0.00 0.00 0.00 4.24
5345 5384 4.339530 GCTTCTTTCTTCTCAGGGTTGTTT 59.660 41.667 0.00 0.00 0.00 2.83
5352 5391 7.979444 TTCTTCTCAGGGTTGTTTAATACTG 57.021 36.000 0.00 0.00 0.00 2.74
5353 5392 7.074653 TCTTCTCAGGGTTGTTTAATACTGT 57.925 36.000 0.00 0.00 0.00 3.55
5383 5422 2.054140 TTGTTTCGTGCTTGGCGTCC 62.054 55.000 0.00 0.00 0.00 4.79
5397 5436 0.931005 GCGTCCGGATCTGTGATTTC 59.069 55.000 7.81 0.00 0.00 2.17
5398 5437 1.200483 CGTCCGGATCTGTGATTTCG 58.800 55.000 7.81 0.00 0.00 3.46
5407 5446 5.334879 CGGATCTGTGATTTCGTTTTCCTTT 60.335 40.000 0.00 0.00 0.00 3.11
5410 5449 3.712187 TGTGATTTCGTTTTCCTTTGGC 58.288 40.909 0.00 0.00 0.00 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.768492 CCCTTTGCCGCTCATGCTC 61.768 63.158 0.00 0.00 36.97 4.26
1 2 2.753043 CCCTTTGCCGCTCATGCT 60.753 61.111 0.00 0.00 36.97 3.79
2 3 4.503314 GCCCTTTGCCGCTCATGC 62.503 66.667 0.00 0.00 0.00 4.06
3 4 4.183686 CGCCCTTTGCCGCTCATG 62.184 66.667 0.00 0.00 36.24 3.07
4 5 4.408821 TCGCCCTTTGCCGCTCAT 62.409 61.111 0.00 0.00 36.24 2.90
11 12 3.793144 CTCACGCTCGCCCTTTGC 61.793 66.667 0.00 0.00 0.00 3.68
12 13 2.357517 ACTCACGCTCGCCCTTTG 60.358 61.111 0.00 0.00 0.00 2.77
13 14 2.357517 CACTCACGCTCGCCCTTT 60.358 61.111 0.00 0.00 0.00 3.11
14 15 4.379243 CCACTCACGCTCGCCCTT 62.379 66.667 0.00 0.00 0.00 3.95
19 20 4.363990 AGTGGCCACTCACGCTCG 62.364 66.667 33.20 0.00 42.10 5.03
27 28 0.823356 ATTGTTTGCGAGTGGCCACT 60.823 50.000 38.42 38.42 45.84 4.00
28 29 0.878416 TATTGTTTGCGAGTGGCCAC 59.122 50.000 29.22 29.22 42.61 5.01
29 30 1.832883 ATATTGTTTGCGAGTGGCCA 58.167 45.000 0.00 0.00 42.61 5.36
30 31 4.036262 TCATTATATTGTTTGCGAGTGGCC 59.964 41.667 0.00 0.00 42.61 5.36
31 32 5.168526 TCATTATATTGTTTGCGAGTGGC 57.831 39.130 0.00 0.00 43.96 5.01
32 33 6.144854 CCATCATTATATTGTTTGCGAGTGG 58.855 40.000 0.00 0.00 0.00 4.00
33 34 6.728200 ACCATCATTATATTGTTTGCGAGTG 58.272 36.000 0.00 0.00 0.00 3.51
34 35 6.942532 ACCATCATTATATTGTTTGCGAGT 57.057 33.333 0.00 0.00 0.00 4.18
48 49 9.923143 CGACTAGACCATTTATAACCATCATTA 57.077 33.333 0.00 0.00 0.00 1.90
49 50 7.878127 CCGACTAGACCATTTATAACCATCATT 59.122 37.037 0.00 0.00 0.00 2.57
50 51 7.234782 TCCGACTAGACCATTTATAACCATCAT 59.765 37.037 0.00 0.00 0.00 2.45
51 52 6.551975 TCCGACTAGACCATTTATAACCATCA 59.448 38.462 0.00 0.00 0.00 3.07
52 53 6.867293 GTCCGACTAGACCATTTATAACCATC 59.133 42.308 0.00 0.00 0.00 3.51
53 54 6.756221 GTCCGACTAGACCATTTATAACCAT 58.244 40.000 0.00 0.00 0.00 3.55
54 55 6.152932 GTCCGACTAGACCATTTATAACCA 57.847 41.667 0.00 0.00 0.00 3.67
66 67 3.900855 TCGCAGGTCCGACTAGAC 58.099 61.111 0.00 0.00 35.95 2.59
78 79 3.626680 TTCTCTTCCGGCGTCGCAG 62.627 63.158 20.50 15.53 34.56 5.18
79 80 2.702751 TTTTCTCTTCCGGCGTCGCA 62.703 55.000 20.50 0.00 34.56 5.10
80 81 2.025418 TTTTCTCTTCCGGCGTCGC 61.025 57.895 9.22 9.22 34.56 5.19
81 82 0.942410 TGTTTTCTCTTCCGGCGTCG 60.942 55.000 0.29 0.29 0.00 5.12
82 83 1.194772 CTTGTTTTCTCTTCCGGCGTC 59.805 52.381 6.01 0.00 0.00 5.19
83 84 1.202604 TCTTGTTTTCTCTTCCGGCGT 60.203 47.619 6.01 0.00 0.00 5.68
84 85 1.508632 TCTTGTTTTCTCTTCCGGCG 58.491 50.000 0.00 0.00 0.00 6.46
85 86 3.982576 TTTCTTGTTTTCTCTTCCGGC 57.017 42.857 0.00 0.00 0.00 6.13
86 87 5.915196 GTGATTTTCTTGTTTTCTCTTCCGG 59.085 40.000 0.00 0.00 0.00 5.14
87 88 6.494842 TGTGATTTTCTTGTTTTCTCTTCCG 58.505 36.000 0.00 0.00 0.00 4.30
88 89 8.355913 AGATGTGATTTTCTTGTTTTCTCTTCC 58.644 33.333 0.00 0.00 0.00 3.46
89 90 9.178427 CAGATGTGATTTTCTTGTTTTCTCTTC 57.822 33.333 0.00 0.00 0.00 2.87
90 91 8.906867 TCAGATGTGATTTTCTTGTTTTCTCTT 58.093 29.630 0.00 0.00 0.00 2.85
91 92 8.455903 TCAGATGTGATTTTCTTGTTTTCTCT 57.544 30.769 0.00 0.00 0.00 3.10
92 93 9.125906 CATCAGATGTGATTTTCTTGTTTTCTC 57.874 33.333 1.88 0.00 40.84 2.87
93 94 8.853126 TCATCAGATGTGATTTTCTTGTTTTCT 58.147 29.630 10.34 0.00 40.84 2.52
94 95 9.635520 ATCATCAGATGTGATTTTCTTGTTTTC 57.364 29.630 10.34 0.00 40.84 2.29
95 96 9.419297 CATCATCAGATGTGATTTTCTTGTTTT 57.581 29.630 10.34 0.00 45.28 2.43
96 97 8.981724 CATCATCAGATGTGATTTTCTTGTTT 57.018 30.769 10.34 0.00 45.28 2.83
111 112 6.363065 AGACCATTTGTAAGCATCATCAGAT 58.637 36.000 0.00 0.00 33.87 2.90
112 113 5.748402 AGACCATTTGTAAGCATCATCAGA 58.252 37.500 0.00 0.00 0.00 3.27
113 114 7.558161 TTAGACCATTTGTAAGCATCATCAG 57.442 36.000 0.00 0.00 0.00 2.90
114 115 7.041848 CGATTAGACCATTTGTAAGCATCATCA 60.042 37.037 0.00 0.00 0.00 3.07
115 116 7.171508 TCGATTAGACCATTTGTAAGCATCATC 59.828 37.037 0.00 0.00 0.00 2.92
116 117 6.992123 TCGATTAGACCATTTGTAAGCATCAT 59.008 34.615 0.00 0.00 0.00 2.45
117 118 6.345298 TCGATTAGACCATTTGTAAGCATCA 58.655 36.000 0.00 0.00 0.00 3.07
118 119 6.844696 TCGATTAGACCATTTGTAAGCATC 57.155 37.500 0.00 0.00 0.00 3.91
119 120 8.774586 GTTATCGATTAGACCATTTGTAAGCAT 58.225 33.333 1.71 0.00 0.00 3.79
120 121 7.766738 TGTTATCGATTAGACCATTTGTAAGCA 59.233 33.333 1.71 0.00 0.00 3.91
121 122 8.138365 TGTTATCGATTAGACCATTTGTAAGC 57.862 34.615 1.71 0.00 0.00 3.09
124 125 9.607988 ACATTGTTATCGATTAGACCATTTGTA 57.392 29.630 1.71 0.00 0.00 2.41
125 126 8.397906 CACATTGTTATCGATTAGACCATTTGT 58.602 33.333 1.71 0.30 0.00 2.83
126 127 7.857389 CCACATTGTTATCGATTAGACCATTTG 59.143 37.037 1.71 2.15 0.00 2.32
127 128 7.468631 GCCACATTGTTATCGATTAGACCATTT 60.469 37.037 1.71 0.00 0.00 2.32
128 129 6.017109 GCCACATTGTTATCGATTAGACCATT 60.017 38.462 1.71 0.00 0.00 3.16
129 130 5.470098 GCCACATTGTTATCGATTAGACCAT 59.530 40.000 1.71 0.00 0.00 3.55
130 131 4.814234 GCCACATTGTTATCGATTAGACCA 59.186 41.667 1.71 0.00 0.00 4.02
131 132 4.084537 CGCCACATTGTTATCGATTAGACC 60.085 45.833 1.71 0.00 0.00 3.85
132 133 4.743151 TCGCCACATTGTTATCGATTAGAC 59.257 41.667 1.71 1.13 0.00 2.59
133 134 4.743151 GTCGCCACATTGTTATCGATTAGA 59.257 41.667 1.71 0.00 0.00 2.10
134 135 4.506288 TGTCGCCACATTGTTATCGATTAG 59.494 41.667 1.71 0.00 0.00 1.73
135 136 4.269123 GTGTCGCCACATTGTTATCGATTA 59.731 41.667 1.71 0.00 41.44 1.75
136 137 3.063452 GTGTCGCCACATTGTTATCGATT 59.937 43.478 1.71 0.00 41.44 3.34
137 138 2.607635 GTGTCGCCACATTGTTATCGAT 59.392 45.455 2.16 2.16 41.44 3.59
138 139 1.996898 GTGTCGCCACATTGTTATCGA 59.003 47.619 0.00 0.00 41.44 3.59
139 140 1.266842 CGTGTCGCCACATTGTTATCG 60.267 52.381 0.00 0.00 41.93 2.92
140 141 2.435685 CGTGTCGCCACATTGTTATC 57.564 50.000 0.00 0.00 41.93 1.75
153 154 1.613270 GCCTAAATTTTGGCGTGTCG 58.387 50.000 24.45 0.00 39.15 4.35
159 160 0.108377 CCACCGGCCTAAATTTTGGC 60.108 55.000 28.78 28.78 46.29 4.52
160 161 1.203758 GTCCACCGGCCTAAATTTTGG 59.796 52.381 13.61 13.61 0.00 3.28
161 162 1.203758 GGTCCACCGGCCTAAATTTTG 59.796 52.381 0.00 0.00 0.00 2.44
162 163 1.552578 GGTCCACCGGCCTAAATTTT 58.447 50.000 0.00 0.00 0.00 1.82
163 164 3.276281 GGTCCACCGGCCTAAATTT 57.724 52.632 0.00 0.00 0.00 1.82
175 176 3.675619 ATGTTAGGCGCCGGTCCAC 62.676 63.158 23.20 14.59 0.00 4.02
176 177 3.379865 GATGTTAGGCGCCGGTCCA 62.380 63.158 23.20 16.79 0.00 4.02
177 178 2.588034 GATGTTAGGCGCCGGTCC 60.588 66.667 23.20 11.16 0.00 4.46
178 179 2.960129 CGATGTTAGGCGCCGGTC 60.960 66.667 23.20 15.42 0.00 4.79
185 186 0.168128 ACAAAAGCGCGATGTTAGGC 59.832 50.000 12.10 0.00 0.00 3.93
186 187 1.463056 TCACAAAAGCGCGATGTTAGG 59.537 47.619 12.10 0.00 0.00 2.69
187 188 2.873170 TCACAAAAGCGCGATGTTAG 57.127 45.000 12.10 0.57 0.00 2.34
188 189 3.610786 TTTCACAAAAGCGCGATGTTA 57.389 38.095 12.10 3.54 0.00 2.41
189 190 2.483583 TTTCACAAAAGCGCGATGTT 57.516 40.000 12.10 0.00 0.00 2.71
190 191 2.384382 CTTTTCACAAAAGCGCGATGT 58.616 42.857 12.10 5.80 41.13 3.06
235 236 8.750298 AGGAGCGTATTATAAGTGCTTATGTAT 58.250 33.333 13.09 9.40 36.52 2.29
236 237 8.118976 AGGAGCGTATTATAAGTGCTTATGTA 57.881 34.615 13.09 5.26 36.52 2.29
237 238 6.994221 AGGAGCGTATTATAAGTGCTTATGT 58.006 36.000 13.09 6.02 36.52 2.29
238 239 9.025020 CATAGGAGCGTATTATAAGTGCTTATG 57.975 37.037 13.09 10.05 36.52 1.90
239 240 8.967918 TCATAGGAGCGTATTATAAGTGCTTAT 58.032 33.333 9.13 9.13 39.02 1.73
240 241 8.344446 TCATAGGAGCGTATTATAAGTGCTTA 57.656 34.615 9.44 0.00 35.73 3.09
241 242 7.228314 TCATAGGAGCGTATTATAAGTGCTT 57.772 36.000 9.44 0.00 35.73 3.91
242 243 6.835819 TCATAGGAGCGTATTATAAGTGCT 57.164 37.500 8.20 8.20 38.89 4.40
243 244 7.221067 GTGATCATAGGAGCGTATTATAAGTGC 59.779 40.741 0.00 0.00 30.14 4.40
244 245 8.244113 TGTGATCATAGGAGCGTATTATAAGTG 58.756 37.037 0.00 0.00 30.14 3.16
245 246 8.349568 TGTGATCATAGGAGCGTATTATAAGT 57.650 34.615 0.00 0.00 30.14 2.24
248 249 9.403583 TGTATGTGATCATAGGAGCGTATTATA 57.596 33.333 0.00 0.00 37.23 0.98
249 250 8.293699 TGTATGTGATCATAGGAGCGTATTAT 57.706 34.615 0.00 0.00 37.23 1.28
250 251 7.696992 TGTATGTGATCATAGGAGCGTATTA 57.303 36.000 0.00 0.00 37.23 0.98
251 252 6.590234 TGTATGTGATCATAGGAGCGTATT 57.410 37.500 0.00 0.00 37.23 1.89
252 253 6.567959 CATGTATGTGATCATAGGAGCGTAT 58.432 40.000 0.00 0.00 37.23 3.06
253 254 5.622233 GCATGTATGTGATCATAGGAGCGTA 60.622 44.000 0.00 0.00 37.23 4.42
254 255 4.814147 CATGTATGTGATCATAGGAGCGT 58.186 43.478 0.00 0.00 37.23 5.07
255 256 3.615937 GCATGTATGTGATCATAGGAGCG 59.384 47.826 0.00 0.00 37.23 5.03
256 257 4.391216 GTGCATGTATGTGATCATAGGAGC 59.609 45.833 0.00 0.00 37.23 4.70
257 258 5.544650 TGTGCATGTATGTGATCATAGGAG 58.455 41.667 0.00 0.00 37.23 3.69
258 259 5.549742 TGTGCATGTATGTGATCATAGGA 57.450 39.130 0.00 0.00 37.23 2.94
259 260 5.935789 TGATGTGCATGTATGTGATCATAGG 59.064 40.000 0.00 0.00 37.23 2.57
260 261 7.611213 ATGATGTGCATGTATGTGATCATAG 57.389 36.000 0.00 0.00 37.23 2.23
261 262 9.321562 GATATGATGTGCATGTATGTGATCATA 57.678 33.333 0.00 16.23 37.87 2.15
262 263 7.282450 GGATATGATGTGCATGTATGTGATCAT 59.718 37.037 0.00 14.24 37.87 2.45
263 264 6.596497 GGATATGATGTGCATGTATGTGATCA 59.404 38.462 0.00 0.00 37.87 2.92
264 265 6.037940 GGGATATGATGTGCATGTATGTGATC 59.962 42.308 0.00 0.00 37.87 2.92
265 266 5.884232 GGGATATGATGTGCATGTATGTGAT 59.116 40.000 0.00 0.00 37.87 3.06
266 267 5.013391 AGGGATATGATGTGCATGTATGTGA 59.987 40.000 0.00 0.00 37.87 3.58
267 268 5.250982 AGGGATATGATGTGCATGTATGTG 58.749 41.667 0.00 0.00 37.87 3.21
268 269 5.509832 AGGGATATGATGTGCATGTATGT 57.490 39.130 0.00 0.00 37.87 2.29
269 270 7.277396 TCATAGGGATATGATGTGCATGTATG 58.723 38.462 0.00 0.00 37.87 2.39
270 271 7.441903 TCATAGGGATATGATGTGCATGTAT 57.558 36.000 0.00 0.00 37.87 2.29
271 272 6.631088 GCTCATAGGGATATGATGTGCATGTA 60.631 42.308 0.00 0.00 39.01 2.29
272 273 5.742063 CTCATAGGGATATGATGTGCATGT 58.258 41.667 0.00 0.00 37.87 3.21
273 274 4.575236 GCTCATAGGGATATGATGTGCATG 59.425 45.833 0.00 0.00 39.01 4.06
274 275 4.226620 TGCTCATAGGGATATGATGTGCAT 59.773 41.667 6.71 0.00 42.17 3.96
275 276 3.583966 TGCTCATAGGGATATGATGTGCA 59.416 43.478 6.71 6.71 43.79 4.57
276 277 4.212143 TGCTCATAGGGATATGATGTGC 57.788 45.455 0.00 0.00 39.41 4.57
277 278 6.236558 AGATGCTCATAGGGATATGATGTG 57.763 41.667 0.00 0.00 36.06 3.21
278 279 6.442885 TGAAGATGCTCATAGGGATATGATGT 59.557 38.462 0.00 0.00 36.06 3.06
279 280 6.885922 TGAAGATGCTCATAGGGATATGATG 58.114 40.000 0.00 0.00 36.06 3.07
280 281 7.402361 TCTTGAAGATGCTCATAGGGATATGAT 59.598 37.037 0.00 0.00 36.06 2.45
281 282 6.727697 TCTTGAAGATGCTCATAGGGATATGA 59.272 38.462 0.00 0.00 35.40 2.15
282 283 6.944096 TCTTGAAGATGCTCATAGGGATATG 58.056 40.000 0.00 0.00 0.00 1.78
283 284 6.958778 TCTCTTGAAGATGCTCATAGGGATAT 59.041 38.462 0.00 0.00 0.00 1.63
284 285 6.210385 GTCTCTTGAAGATGCTCATAGGGATA 59.790 42.308 0.00 0.00 36.11 2.59
285 286 5.011943 GTCTCTTGAAGATGCTCATAGGGAT 59.988 44.000 0.00 0.00 36.11 3.85
286 287 4.343526 GTCTCTTGAAGATGCTCATAGGGA 59.656 45.833 0.00 0.00 36.11 4.20
287 288 4.344679 AGTCTCTTGAAGATGCTCATAGGG 59.655 45.833 0.00 0.00 36.11 3.53
288 289 5.534207 AGTCTCTTGAAGATGCTCATAGG 57.466 43.478 0.00 0.00 36.11 2.57
289 290 6.642131 GCTTAGTCTCTTGAAGATGCTCATAG 59.358 42.308 0.00 0.00 36.11 2.23
290 291 6.462207 GGCTTAGTCTCTTGAAGATGCTCATA 60.462 42.308 0.00 0.00 36.11 2.15
291 292 5.358922 GCTTAGTCTCTTGAAGATGCTCAT 58.641 41.667 0.00 0.00 36.11 2.90
292 293 4.382470 GGCTTAGTCTCTTGAAGATGCTCA 60.382 45.833 0.00 0.00 36.11 4.26
293 294 4.119136 GGCTTAGTCTCTTGAAGATGCTC 58.881 47.826 0.00 0.00 36.11 4.26
294 295 3.430098 CGGCTTAGTCTCTTGAAGATGCT 60.430 47.826 0.00 0.00 36.11 3.79
295 296 2.863137 CGGCTTAGTCTCTTGAAGATGC 59.137 50.000 0.00 0.00 36.11 3.91
296 297 3.452474 CCGGCTTAGTCTCTTGAAGATG 58.548 50.000 0.00 0.00 36.11 2.90
297 298 2.159028 GCCGGCTTAGTCTCTTGAAGAT 60.159 50.000 22.15 0.00 36.11 2.40
298 299 1.204941 GCCGGCTTAGTCTCTTGAAGA 59.795 52.381 22.15 0.00 0.00 2.87
299 300 1.066858 TGCCGGCTTAGTCTCTTGAAG 60.067 52.381 29.70 0.00 0.00 3.02
300 301 0.973632 TGCCGGCTTAGTCTCTTGAA 59.026 50.000 29.70 0.00 0.00 2.69
301 302 1.195115 ATGCCGGCTTAGTCTCTTGA 58.805 50.000 29.70 1.81 0.00 3.02
302 303 2.890808 TATGCCGGCTTAGTCTCTTG 57.109 50.000 29.70 0.00 0.00 3.02
303 304 2.029828 CGATATGCCGGCTTAGTCTCTT 60.030 50.000 29.70 9.34 0.00 2.85
304 305 1.542030 CGATATGCCGGCTTAGTCTCT 59.458 52.381 29.70 10.12 0.00 3.10
305 306 1.983972 CGATATGCCGGCTTAGTCTC 58.016 55.000 29.70 18.01 0.00 3.36
306 307 0.038159 GCGATATGCCGGCTTAGTCT 60.038 55.000 29.70 10.92 37.76 3.24
307 308 2.446341 GCGATATGCCGGCTTAGTC 58.554 57.895 29.70 20.60 37.76 2.59
308 309 4.675404 GCGATATGCCGGCTTAGT 57.325 55.556 29.70 14.88 37.76 2.24
317 318 3.449042 GCGTCTACGGCGATATGC 58.551 61.111 16.62 11.54 45.38 3.14
325 326 1.640604 GACTACGAGGCGTCTACGG 59.359 63.158 12.25 0.00 41.54 4.02
326 327 1.272131 CGACTACGAGGCGTCTACG 59.728 63.158 4.69 0.00 42.99 3.51
338 339 2.202531 GGCGTTCCCGTCGACTAC 60.203 66.667 14.70 5.56 36.15 2.73
339 340 2.360350 AGGCGTTCCCGTCGACTA 60.360 61.111 14.70 0.00 45.23 2.59
341 342 4.790861 GGAGGCGTTCCCGTCGAC 62.791 72.222 5.18 5.18 45.26 4.20
349 350 2.093310 GCGTTAGTAAAAGGAGGCGTTC 59.907 50.000 0.00 0.00 0.00 3.95
350 351 2.071540 GCGTTAGTAAAAGGAGGCGTT 58.928 47.619 0.00 0.00 0.00 4.84
351 352 1.718396 GCGTTAGTAAAAGGAGGCGT 58.282 50.000 0.00 0.00 0.00 5.68
352 353 0.643820 CGCGTTAGTAAAAGGAGGCG 59.356 55.000 0.00 0.00 39.47 5.52
353 354 0.372679 GCGCGTTAGTAAAAGGAGGC 59.627 55.000 8.43 0.00 0.00 4.70
354 355 1.717194 TGCGCGTTAGTAAAAGGAGG 58.283 50.000 8.43 0.00 0.00 4.30
355 356 2.927477 TGATGCGCGTTAGTAAAAGGAG 59.073 45.455 8.43 0.00 0.00 3.69
356 357 2.962125 TGATGCGCGTTAGTAAAAGGA 58.038 42.857 8.43 0.00 0.00 3.36
357 358 3.601586 CGATGATGCGCGTTAGTAAAAGG 60.602 47.826 8.43 0.00 0.00 3.11
358 359 3.242016 TCGATGATGCGCGTTAGTAAAAG 59.758 43.478 8.43 0.00 0.00 2.27
359 360 3.180613 TCGATGATGCGCGTTAGTAAAA 58.819 40.909 8.43 0.00 0.00 1.52
360 361 2.799871 TCGATGATGCGCGTTAGTAAA 58.200 42.857 8.43 0.00 0.00 2.01
361 362 2.478547 TCGATGATGCGCGTTAGTAA 57.521 45.000 8.43 0.00 0.00 2.24
362 363 2.478547 TTCGATGATGCGCGTTAGTA 57.521 45.000 8.43 0.00 0.00 1.82
363 364 1.635844 TTTCGATGATGCGCGTTAGT 58.364 45.000 8.43 0.00 0.00 2.24
364 365 2.712132 TTTTCGATGATGCGCGTTAG 57.288 45.000 8.43 0.00 0.00 2.34
365 366 2.863740 AGATTTTCGATGATGCGCGTTA 59.136 40.909 8.43 0.00 0.00 3.18
366 367 1.665679 AGATTTTCGATGATGCGCGTT 59.334 42.857 8.43 0.00 0.00 4.84
367 368 1.290203 AGATTTTCGATGATGCGCGT 58.710 45.000 8.43 0.00 0.00 6.01
368 369 3.503851 TTAGATTTTCGATGATGCGCG 57.496 42.857 0.00 0.00 0.00 6.86
392 393 6.861572 GGAGTAATTTTTAGTGCTCGCTTTTT 59.138 34.615 0.00 0.00 0.00 1.94
393 394 6.379386 GGAGTAATTTTTAGTGCTCGCTTTT 58.621 36.000 0.00 0.00 0.00 2.27
394 395 5.106277 GGGAGTAATTTTTAGTGCTCGCTTT 60.106 40.000 0.00 0.00 34.50 3.51
395 396 4.395231 GGGAGTAATTTTTAGTGCTCGCTT 59.605 41.667 0.00 0.00 34.50 4.68
396 397 3.939592 GGGAGTAATTTTTAGTGCTCGCT 59.060 43.478 0.00 0.00 34.50 4.93
397 398 3.939592 AGGGAGTAATTTTTAGTGCTCGC 59.060 43.478 0.00 0.00 36.56 5.03
398 399 5.220416 CGAAGGGAGTAATTTTTAGTGCTCG 60.220 44.000 0.00 0.00 0.00 5.03
399 400 5.447413 GCGAAGGGAGTAATTTTTAGTGCTC 60.447 44.000 0.00 0.00 0.00 4.26
400 401 4.395231 GCGAAGGGAGTAATTTTTAGTGCT 59.605 41.667 0.00 0.00 0.00 4.40
401 402 4.438336 GGCGAAGGGAGTAATTTTTAGTGC 60.438 45.833 0.00 0.00 0.00 4.40
402 403 4.095932 GGGCGAAGGGAGTAATTTTTAGTG 59.904 45.833 0.00 0.00 0.00 2.74
403 404 4.267536 GGGCGAAGGGAGTAATTTTTAGT 58.732 43.478 0.00 0.00 0.00 2.24
404 405 3.311596 CGGGCGAAGGGAGTAATTTTTAG 59.688 47.826 0.00 0.00 0.00 1.85
405 406 3.055240 TCGGGCGAAGGGAGTAATTTTTA 60.055 43.478 0.00 0.00 0.00 1.52
406 407 2.089201 CGGGCGAAGGGAGTAATTTTT 58.911 47.619 0.00 0.00 0.00 1.94
407 408 1.279846 TCGGGCGAAGGGAGTAATTTT 59.720 47.619 0.00 0.00 0.00 1.82
408 409 0.906775 TCGGGCGAAGGGAGTAATTT 59.093 50.000 0.00 0.00 0.00 1.82
409 410 0.906775 TTCGGGCGAAGGGAGTAATT 59.093 50.000 0.00 0.00 0.00 1.40
410 411 0.906775 TTTCGGGCGAAGGGAGTAAT 59.093 50.000 0.00 0.00 35.38 1.89
411 412 0.686224 TTTTCGGGCGAAGGGAGTAA 59.314 50.000 0.00 0.00 35.38 2.24
412 413 0.906775 ATTTTCGGGCGAAGGGAGTA 59.093 50.000 0.00 0.00 35.38 2.59
413 414 0.906775 TATTTTCGGGCGAAGGGAGT 59.093 50.000 0.00 0.00 35.38 3.85
414 415 2.256117 ATATTTTCGGGCGAAGGGAG 57.744 50.000 0.00 0.00 35.38 4.30
415 416 2.701951 AGTATATTTTCGGGCGAAGGGA 59.298 45.455 0.00 0.00 35.38 4.20
416 417 3.121738 AGTATATTTTCGGGCGAAGGG 57.878 47.619 0.00 0.00 35.38 3.95
417 418 3.875134 ACAAGTATATTTTCGGGCGAAGG 59.125 43.478 0.00 0.00 35.38 3.46
418 419 4.569162 TGACAAGTATATTTTCGGGCGAAG 59.431 41.667 0.00 0.00 35.38 3.79
419 420 4.505808 TGACAAGTATATTTTCGGGCGAA 58.494 39.130 0.00 0.00 0.00 4.70
420 421 4.126208 TGACAAGTATATTTTCGGGCGA 57.874 40.909 0.00 0.00 0.00 5.54
421 422 4.509970 TGATGACAAGTATATTTTCGGGCG 59.490 41.667 0.00 0.00 0.00 6.13
422 423 6.371809 TTGATGACAAGTATATTTTCGGGC 57.628 37.500 0.00 0.00 0.00 6.13
423 424 9.236691 CATTTTGATGACAAGTATATTTTCGGG 57.763 33.333 0.00 0.00 37.32 5.14
424 425 9.236691 CCATTTTGATGACAAGTATATTTTCGG 57.763 33.333 0.00 0.00 37.32 4.30
504 505 9.958234 TTTGAAAATACTTGTCATGAAAATCGA 57.042 25.926 0.00 0.00 0.00 3.59
505 506 9.993881 GTTTGAAAATACTTGTCATGAAAATCG 57.006 29.630 0.00 0.00 0.00 3.34
506 507 9.993881 CGTTTGAAAATACTTGTCATGAAAATC 57.006 29.630 0.00 0.00 0.00 2.17
507 508 9.743057 TCGTTTGAAAATACTTGTCATGAAAAT 57.257 25.926 0.00 0.00 0.00 1.82
508 509 9.574458 TTCGTTTGAAAATACTTGTCATGAAAA 57.426 25.926 0.00 0.00 0.00 2.29
509 510 9.015577 GTTCGTTTGAAAATACTTGTCATGAAA 57.984 29.630 0.00 0.00 35.46 2.69
510 511 7.374754 CGTTCGTTTGAAAATACTTGTCATGAA 59.625 33.333 0.00 0.00 35.46 2.57
511 512 6.848800 CGTTCGTTTGAAAATACTTGTCATGA 59.151 34.615 0.00 0.00 35.46 3.07
512 513 6.086241 CCGTTCGTTTGAAAATACTTGTCATG 59.914 38.462 0.00 0.00 35.46 3.07
513 514 6.017770 TCCGTTCGTTTGAAAATACTTGTCAT 60.018 34.615 0.00 0.00 35.46 3.06
514 515 5.293814 TCCGTTCGTTTGAAAATACTTGTCA 59.706 36.000 0.00 0.00 35.46 3.58
515 516 5.740406 TCCGTTCGTTTGAAAATACTTGTC 58.260 37.500 0.00 0.00 35.46 3.18
516 517 5.295045 ACTCCGTTCGTTTGAAAATACTTGT 59.705 36.000 0.00 0.00 35.46 3.16
517 518 5.744490 ACTCCGTTCGTTTGAAAATACTTG 58.256 37.500 0.00 0.00 35.46 3.16
518 519 5.996669 ACTCCGTTCGTTTGAAAATACTT 57.003 34.783 0.00 0.00 35.46 2.24
519 520 6.218746 AGTACTCCGTTCGTTTGAAAATACT 58.781 36.000 0.00 0.00 35.46 2.12
520 521 6.457851 AGTACTCCGTTCGTTTGAAAATAC 57.542 37.500 0.00 0.00 35.46 1.89
521 522 6.129115 CGAAGTACTCCGTTCGTTTGAAAATA 60.129 38.462 6.54 0.00 40.52 1.40
522 523 5.332808 CGAAGTACTCCGTTCGTTTGAAAAT 60.333 40.000 6.54 0.00 40.52 1.82
523 524 4.026640 CGAAGTACTCCGTTCGTTTGAAAA 60.027 41.667 6.54 0.00 40.52 2.29
524 525 3.486841 CGAAGTACTCCGTTCGTTTGAAA 59.513 43.478 6.54 0.00 40.52 2.69
525 526 3.044986 CGAAGTACTCCGTTCGTTTGAA 58.955 45.455 6.54 0.00 40.52 2.69
526 527 2.653890 CGAAGTACTCCGTTCGTTTGA 58.346 47.619 6.54 0.00 40.52 2.69
527 528 1.123756 GCGAAGTACTCCGTTCGTTTG 59.876 52.381 14.35 0.00 45.81 2.93
528 529 1.000938 AGCGAAGTACTCCGTTCGTTT 60.001 47.619 14.35 3.28 45.81 3.60
529 530 0.595095 AGCGAAGTACTCCGTTCGTT 59.405 50.000 14.35 7.26 45.81 3.85
530 531 1.396301 CTAGCGAAGTACTCCGTTCGT 59.604 52.381 14.35 6.01 45.81 3.85
531 532 1.662629 TCTAGCGAAGTACTCCGTTCG 59.337 52.381 2.71 6.85 46.60 3.95
532 533 2.677337 AGTCTAGCGAAGTACTCCGTTC 59.323 50.000 2.71 0.00 0.00 3.95
533 534 2.677337 GAGTCTAGCGAAGTACTCCGTT 59.323 50.000 2.71 0.00 33.74 4.44
534 535 2.278854 GAGTCTAGCGAAGTACTCCGT 58.721 52.381 2.71 0.00 33.74 4.69
535 536 2.277969 TGAGTCTAGCGAAGTACTCCG 58.722 52.381 0.00 0.00 38.04 4.63
536 537 3.533547 TCTGAGTCTAGCGAAGTACTCC 58.466 50.000 0.00 0.00 38.04 3.85
537 538 5.178067 GGTATCTGAGTCTAGCGAAGTACTC 59.822 48.000 0.00 0.00 39.04 2.59
538 539 5.058490 GGTATCTGAGTCTAGCGAAGTACT 58.942 45.833 0.00 0.00 0.00 2.73
539 540 4.815308 TGGTATCTGAGTCTAGCGAAGTAC 59.185 45.833 0.00 0.00 0.00 2.73
540 541 4.815308 GTGGTATCTGAGTCTAGCGAAGTA 59.185 45.833 0.00 0.00 0.00 2.24
541 542 3.628487 GTGGTATCTGAGTCTAGCGAAGT 59.372 47.826 0.00 0.00 0.00 3.01
542 543 3.880490 AGTGGTATCTGAGTCTAGCGAAG 59.120 47.826 0.00 0.00 0.00 3.79
543 544 3.628032 CAGTGGTATCTGAGTCTAGCGAA 59.372 47.826 0.00 0.00 37.61 4.70
544 545 3.206964 CAGTGGTATCTGAGTCTAGCGA 58.793 50.000 0.00 0.00 37.61 4.93
545 546 2.946329 ACAGTGGTATCTGAGTCTAGCG 59.054 50.000 0.00 0.00 38.63 4.26
546 547 3.316868 GGACAGTGGTATCTGAGTCTAGC 59.683 52.174 0.00 0.00 38.63 3.42
547 548 4.787551 AGGACAGTGGTATCTGAGTCTAG 58.212 47.826 0.00 0.00 38.63 2.43
548 549 4.864483 AGGACAGTGGTATCTGAGTCTA 57.136 45.455 0.00 0.00 38.63 2.59
549 550 3.748645 AGGACAGTGGTATCTGAGTCT 57.251 47.619 0.00 0.00 38.63 3.24
550 551 4.528920 AGTAGGACAGTGGTATCTGAGTC 58.471 47.826 0.00 0.00 38.63 3.36
551 552 4.594675 AGTAGGACAGTGGTATCTGAGT 57.405 45.455 0.00 0.00 38.63 3.41
552 553 5.299782 GGTTAGTAGGACAGTGGTATCTGAG 59.700 48.000 0.00 0.00 38.63 3.35
553 554 5.198965 GGTTAGTAGGACAGTGGTATCTGA 58.801 45.833 0.00 0.00 38.63 3.27
554 555 4.954202 TGGTTAGTAGGACAGTGGTATCTG 59.046 45.833 0.00 0.00 40.80 2.90
555 556 5.202746 TGGTTAGTAGGACAGTGGTATCT 57.797 43.478 0.00 0.00 0.00 1.98
556 557 6.097839 TGAATGGTTAGTAGGACAGTGGTATC 59.902 42.308 0.00 0.00 0.00 2.24
557 558 5.962031 TGAATGGTTAGTAGGACAGTGGTAT 59.038 40.000 0.00 0.00 0.00 2.73
558 559 5.335261 TGAATGGTTAGTAGGACAGTGGTA 58.665 41.667 0.00 0.00 0.00 3.25
559 560 4.164981 TGAATGGTTAGTAGGACAGTGGT 58.835 43.478 0.00 0.00 0.00 4.16
560 561 4.819105 TGAATGGTTAGTAGGACAGTGG 57.181 45.455 0.00 0.00 0.00 4.00
561 562 4.935808 GGTTGAATGGTTAGTAGGACAGTG 59.064 45.833 0.00 0.00 0.00 3.66
562 563 4.844655 AGGTTGAATGGTTAGTAGGACAGT 59.155 41.667 0.00 0.00 0.00 3.55
563 564 5.422214 AGGTTGAATGGTTAGTAGGACAG 57.578 43.478 0.00 0.00 0.00 3.51
564 565 5.556915 CAAGGTTGAATGGTTAGTAGGACA 58.443 41.667 0.00 0.00 0.00 4.02
565 566 4.395231 GCAAGGTTGAATGGTTAGTAGGAC 59.605 45.833 0.00 0.00 0.00 3.85
566 567 4.288626 AGCAAGGTTGAATGGTTAGTAGGA 59.711 41.667 0.00 0.00 0.00 2.94
567 568 4.589908 AGCAAGGTTGAATGGTTAGTAGG 58.410 43.478 0.00 0.00 0.00 3.18
568 569 5.245531 TGAGCAAGGTTGAATGGTTAGTAG 58.754 41.667 0.00 0.00 0.00 2.57
569 570 5.235850 TGAGCAAGGTTGAATGGTTAGTA 57.764 39.130 0.00 0.00 0.00 1.82
570 571 4.098914 TGAGCAAGGTTGAATGGTTAGT 57.901 40.909 0.00 0.00 0.00 2.24
571 572 5.452078 TTTGAGCAAGGTTGAATGGTTAG 57.548 39.130 0.00 0.00 0.00 2.34
572 573 5.860941 TTTTGAGCAAGGTTGAATGGTTA 57.139 34.783 0.00 0.00 0.00 2.85
573 574 4.751767 TTTTGAGCAAGGTTGAATGGTT 57.248 36.364 0.00 0.00 0.00 3.67
574 575 4.751767 TTTTTGAGCAAGGTTGAATGGT 57.248 36.364 0.00 0.00 0.00 3.55
597 598 4.080638 TGGCTTCAAGGTTGAATGGTTTTT 60.081 37.500 5.63 0.00 45.26 1.94
598 599 3.454082 TGGCTTCAAGGTTGAATGGTTTT 59.546 39.130 5.63 0.00 45.26 2.43
599 600 3.037549 TGGCTTCAAGGTTGAATGGTTT 58.962 40.909 5.63 0.00 45.26 3.27
600 601 2.676748 TGGCTTCAAGGTTGAATGGTT 58.323 42.857 5.63 0.00 45.26 3.67
601 602 2.380064 TGGCTTCAAGGTTGAATGGT 57.620 45.000 5.63 0.00 45.26 3.55
602 603 3.967332 ATTGGCTTCAAGGTTGAATGG 57.033 42.857 5.63 0.00 45.26 3.16
603 604 6.632909 TCAATATTGGCTTCAAGGTTGAATG 58.367 36.000 15.36 0.00 45.26 2.67
604 605 6.855763 TCAATATTGGCTTCAAGGTTGAAT 57.144 33.333 15.36 0.00 45.26 2.57
605 606 6.662865 TTCAATATTGGCTTCAAGGTTGAA 57.337 33.333 15.36 5.09 44.31 2.69
606 607 6.662865 TTTCAATATTGGCTTCAAGGTTGA 57.337 33.333 15.36 0.00 36.65 3.18
607 608 5.349543 GCTTTCAATATTGGCTTCAAGGTTG 59.650 40.000 15.36 0.00 33.43 3.77
608 609 5.482006 GCTTTCAATATTGGCTTCAAGGTT 58.518 37.500 15.36 0.00 33.43 3.50
609 610 4.081476 GGCTTTCAATATTGGCTTCAAGGT 60.081 41.667 15.36 0.00 33.43 3.50
610 611 4.436332 GGCTTTCAATATTGGCTTCAAGG 58.564 43.478 15.36 3.97 33.43 3.61
611 612 4.436332 GGGCTTTCAATATTGGCTTCAAG 58.564 43.478 15.36 10.46 33.43 3.02
612 613 3.197549 GGGGCTTTCAATATTGGCTTCAA 59.802 43.478 15.36 0.00 34.56 2.69
613 614 2.765699 GGGGCTTTCAATATTGGCTTCA 59.234 45.455 15.36 0.00 0.00 3.02
614 615 2.765699 TGGGGCTTTCAATATTGGCTTC 59.234 45.455 15.36 8.00 0.00 3.86
615 616 2.831565 TGGGGCTTTCAATATTGGCTT 58.168 42.857 15.36 0.00 0.00 4.35
616 617 2.548464 TGGGGCTTTCAATATTGGCT 57.452 45.000 15.36 0.00 0.00 4.75
617 618 3.843893 ATTGGGGCTTTCAATATTGGC 57.156 42.857 15.36 10.59 33.57 4.52
618 619 6.179040 TCAAAATTGGGGCTTTCAATATTGG 58.821 36.000 15.36 0.94 34.15 3.16
619 620 7.104939 TCTCAAAATTGGGGCTTTCAATATTG 58.895 34.615 9.29 9.29 34.15 1.90
620 621 7.256494 TCTCAAAATTGGGGCTTTCAATATT 57.744 32.000 0.00 0.00 34.15 1.28
621 622 6.872585 TCTCAAAATTGGGGCTTTCAATAT 57.127 33.333 0.00 0.00 34.15 1.28
622 623 6.678568 TTCTCAAAATTGGGGCTTTCAATA 57.321 33.333 0.00 0.00 34.15 1.90
623 624 5.554070 CTTCTCAAAATTGGGGCTTTCAAT 58.446 37.500 0.00 0.00 36.50 2.57
624 625 4.743348 GCTTCTCAAAATTGGGGCTTTCAA 60.743 41.667 0.00 0.00 0.00 2.69
625 626 3.244181 GCTTCTCAAAATTGGGGCTTTCA 60.244 43.478 0.00 0.00 0.00 2.69
626 627 3.329386 GCTTCTCAAAATTGGGGCTTTC 58.671 45.455 0.00 0.00 0.00 2.62
627 628 2.038952 GGCTTCTCAAAATTGGGGCTTT 59.961 45.455 0.00 0.00 0.00 3.51
628 629 1.625315 GGCTTCTCAAAATTGGGGCTT 59.375 47.619 0.00 0.00 0.00 4.35
629 630 1.269958 GGCTTCTCAAAATTGGGGCT 58.730 50.000 0.00 0.00 0.00 5.19
630 631 0.975887 TGGCTTCTCAAAATTGGGGC 59.024 50.000 0.00 0.00 0.00 5.80
631 632 2.528564 TCTGGCTTCTCAAAATTGGGG 58.471 47.619 0.00 0.00 0.00 4.96
632 633 6.475596 AATATCTGGCTTCTCAAAATTGGG 57.524 37.500 0.00 0.00 0.00 4.12
633 634 6.038603 TCGAATATCTGGCTTCTCAAAATTGG 59.961 38.462 0.00 0.00 0.00 3.16
634 635 7.019774 TCGAATATCTGGCTTCTCAAAATTG 57.980 36.000 0.00 0.00 0.00 2.32
635 636 7.337942 ACTTCGAATATCTGGCTTCTCAAAATT 59.662 33.333 0.00 0.00 0.00 1.82
636 637 6.825721 ACTTCGAATATCTGGCTTCTCAAAAT 59.174 34.615 0.00 0.00 0.00 1.82
637 638 6.092670 CACTTCGAATATCTGGCTTCTCAAAA 59.907 38.462 0.00 0.00 0.00 2.44
638 639 5.582269 CACTTCGAATATCTGGCTTCTCAAA 59.418 40.000 0.00 0.00 0.00 2.69
639 640 5.111989 CACTTCGAATATCTGGCTTCTCAA 58.888 41.667 0.00 0.00 0.00 3.02
640 641 4.442052 CCACTTCGAATATCTGGCTTCTCA 60.442 45.833 0.00 0.00 0.00 3.27
641 642 4.054671 CCACTTCGAATATCTGGCTTCTC 58.945 47.826 0.00 0.00 0.00 2.87
642 643 3.181461 CCCACTTCGAATATCTGGCTTCT 60.181 47.826 0.00 0.00 0.00 2.85
643 644 3.134458 CCCACTTCGAATATCTGGCTTC 58.866 50.000 0.00 0.00 0.00 3.86
644 645 2.746472 GCCCACTTCGAATATCTGGCTT 60.746 50.000 0.00 0.00 34.83 4.35
645 646 1.202698 GCCCACTTCGAATATCTGGCT 60.203 52.381 0.00 0.00 34.83 4.75
646 647 1.230324 GCCCACTTCGAATATCTGGC 58.770 55.000 0.00 3.47 0.00 4.85
647 648 2.620251 TGCCCACTTCGAATATCTGG 57.380 50.000 0.00 1.42 0.00 3.86
648 649 6.652481 AGATATTTGCCCACTTCGAATATCTG 59.348 38.462 17.88 0.00 46.11 2.90
649 650 6.773638 AGATATTTGCCCACTTCGAATATCT 58.226 36.000 14.90 14.90 44.70 1.98
650 651 6.650807 TCAGATATTTGCCCACTTCGAATATC 59.349 38.462 0.00 11.99 42.35 1.63
682 683 6.017192 AGGGGGAGGAGAAGAAAAATAAAAC 58.983 40.000 0.00 0.00 0.00 2.43
685 686 5.108752 AGAGGGGGAGGAGAAGAAAAATAA 58.891 41.667 0.00 0.00 0.00 1.40
687 688 3.546840 AGAGGGGGAGGAGAAGAAAAAT 58.453 45.455 0.00 0.00 0.00 1.82
688 689 3.005529 AGAGGGGGAGGAGAAGAAAAA 57.994 47.619 0.00 0.00 0.00 1.94
689 690 2.644798 CAAGAGGGGGAGGAGAAGAAAA 59.355 50.000 0.00 0.00 0.00 2.29
690 691 2.269940 CAAGAGGGGGAGGAGAAGAAA 58.730 52.381 0.00 0.00 0.00 2.52
691 692 1.555765 CCAAGAGGGGGAGGAGAAGAA 60.556 57.143 0.00 0.00 0.00 2.52
692 693 0.043334 CCAAGAGGGGGAGGAGAAGA 59.957 60.000 0.00 0.00 0.00 2.87
693 694 0.252927 ACCAAGAGGGGGAGGAGAAG 60.253 60.000 0.00 0.00 42.91 2.85
694 695 0.252742 GACCAAGAGGGGGAGGAGAA 60.253 60.000 0.00 0.00 42.91 2.87
695 696 1.156322 AGACCAAGAGGGGGAGGAGA 61.156 60.000 0.00 0.00 42.91 3.71
696 697 0.637195 TAGACCAAGAGGGGGAGGAG 59.363 60.000 0.00 0.00 42.91 3.69
697 698 0.338814 GTAGACCAAGAGGGGGAGGA 59.661 60.000 0.00 0.00 42.91 3.71
698 699 0.691413 GGTAGACCAAGAGGGGGAGG 60.691 65.000 0.00 0.00 42.91 4.30
934 947 1.352352 AGGTCAGTGGGGATTTGACTG 59.648 52.381 0.00 0.00 40.71 3.51
1033 1046 3.411517 ATTCCCCGGTGGCTCTGG 61.412 66.667 7.46 7.46 42.06 3.86
1063 1076 1.521681 GGGGTTTCTCGGCGATCTG 60.522 63.158 11.27 0.00 0.00 2.90
1078 1091 1.250840 GCTTGCTAACCAACCTGGGG 61.251 60.000 0.00 0.00 43.37 4.96
1110 1123 0.179073 ATGAGAATTCGACGCCTGGG 60.179 55.000 0.00 0.00 0.00 4.45
1120 1133 3.119602 TCAGCAAGCAAGCATGAGAATTC 60.120 43.478 0.00 0.00 36.85 2.17
1143 1156 3.034370 GCGCCGAAAAATCGCTCCA 62.034 57.895 0.00 0.00 44.79 3.86
1153 1166 2.715737 AAAATAGCAAAGCGCCGAAA 57.284 40.000 2.29 0.00 44.04 3.46
1156 1169 0.991344 CCAAAAATAGCAAAGCGCCG 59.009 50.000 2.29 0.00 44.04 6.46
1293 1306 2.628178 CCCTATACGAGGCACATTCTCA 59.372 50.000 0.00 0.00 45.17 3.27
1299 1312 0.177141 GCAACCCTATACGAGGCACA 59.823 55.000 0.00 0.00 45.17 4.57
1301 1314 1.440060 CGCAACCCTATACGAGGCA 59.560 57.895 0.00 0.00 45.17 4.75
1305 1318 1.184431 TGAACCGCAACCCTATACGA 58.816 50.000 0.00 0.00 0.00 3.43
1308 1321 2.093341 GGTCTTGAACCGCAACCCTATA 60.093 50.000 0.00 0.00 38.58 1.31
1311 1324 1.228154 GGTCTTGAACCGCAACCCT 60.228 57.895 0.00 0.00 38.58 4.34
1455 1468 3.049080 ATTTGCTCGCCCTCTCCCC 62.049 63.158 0.00 0.00 0.00 4.81
1491 1504 3.127721 GGCAGTTAATCTTTGCTGTCTCC 59.872 47.826 0.00 0.00 37.93 3.71
1494 1507 2.159517 CGGGCAGTTAATCTTTGCTGTC 60.160 50.000 0.00 0.00 37.93 3.51
1528 1541 1.610102 CCTGTCCTGCCTCAACTTCAG 60.610 57.143 0.00 0.00 0.00 3.02
1560 1573 4.753877 TCGAGCTTGGCGTCGTCG 62.754 66.667 0.00 0.00 37.46 5.12
1605 1618 2.202987 CAGCTCATGGGCGAGTCC 60.203 66.667 12.97 0.00 35.33 3.85
1656 1669 1.200020 CCTTTCAGCCGTGAACCATTC 59.800 52.381 0.00 0.00 42.60 2.67
1680 1693 3.126831 GTCAGCTATCGGAACATTCCTG 58.873 50.000 8.97 3.16 45.33 3.86
1842 1855 5.130350 TCACTCCAAAACAAGTTCCTTAGG 58.870 41.667 0.00 0.00 0.00 2.69
1925 1938 9.481340 GCAGATCATATTTGTCAGTCAAGTATA 57.519 33.333 0.00 0.00 37.02 1.47
1938 1951 7.318141 AGAAAACAAGTGGCAGATCATATTTG 58.682 34.615 0.00 0.00 0.00 2.32
2001 2014 1.635663 CCGAAAGCAAGCCAGTACCG 61.636 60.000 0.00 0.00 0.00 4.02
2019 2032 1.190643 AGCTCTCAGCACTTAGGTCC 58.809 55.000 0.00 0.00 45.56 4.46
2022 2035 4.022416 CAGGTATAGCTCTCAGCACTTAGG 60.022 50.000 0.26 0.00 45.56 2.69
2092 2105 2.233676 TGTAGTGCTCGGTGATGATTGT 59.766 45.455 0.00 0.00 0.00 2.71
2118 2131 3.459232 TCTCTAACCGCATCCAGAATG 57.541 47.619 0.00 0.00 38.50 2.67
2220 2233 7.417612 TCAGTGCTCTCTTAATTGTTTTGAAC 58.582 34.615 0.00 0.00 0.00 3.18
2577 2590 4.756642 TGCTCTTCCATGTAGAACTTTGTG 59.243 41.667 0.00 0.00 0.00 3.33
3090 3103 1.072015 CCATCATCCAGAAGAGCCCTC 59.928 57.143 0.00 0.00 0.00 4.30
3448 3461 5.934625 ACGATGTCCCTTGAATCATATTAGC 59.065 40.000 0.00 0.00 0.00 3.09
4118 4135 2.942376 TGTGTGTTTGTCTTGCTACCAG 59.058 45.455 0.00 0.00 0.00 4.00
4186 4203 1.623311 TCAGGCTGGAAAACGATGAGA 59.377 47.619 15.73 0.00 0.00 3.27
4301 4318 7.472804 GCTTTATAAATGGTAAAATGGGGAGGG 60.473 40.741 0.00 0.00 0.00 4.30
4354 4377 9.404848 CATTGGATTATCCTGCAATATAGTCAT 57.595 33.333 12.91 0.00 35.31 3.06
4395 4418 2.093973 CACAATCTACCCTGCTCTTCGT 60.094 50.000 0.00 0.00 0.00 3.85
4412 4435 5.771469 CCACATTTAGAGCAATGAACACAA 58.229 37.500 1.81 0.00 37.55 3.33
4414 4437 4.168760 GCCACATTTAGAGCAATGAACAC 58.831 43.478 1.81 0.00 37.55 3.32
4428 4451 8.686334 CATACCTAAAATTCTACTGCCACATTT 58.314 33.333 0.00 0.00 0.00 2.32
4484 4507 6.249260 GCTACATTAAGAACATGTCAAAAGCG 59.751 38.462 0.00 0.00 36.28 4.68
4509 4532 4.509230 CCCGACATGATCATAAGTTCACAG 59.491 45.833 8.15 0.00 0.00 3.66
4539 4562 4.067896 GTGTCAGCAGATGGAGAGAAAAA 58.932 43.478 0.00 0.00 0.00 1.94
4544 4567 1.823610 TGAGTGTCAGCAGATGGAGAG 59.176 52.381 0.00 0.00 0.00 3.20
4584 4611 7.761249 GCCAACATGAAAGAAATAAGTTGCTAT 59.239 33.333 0.00 0.00 34.98 2.97
4585 4612 7.039784 AGCCAACATGAAAGAAATAAGTTGCTA 60.040 33.333 0.00 0.00 34.98 3.49
4587 4614 5.928264 AGCCAACATGAAAGAAATAAGTTGC 59.072 36.000 0.00 0.00 34.98 4.17
4589 4616 7.288810 TGAGCCAACATGAAAGAAATAAGTT 57.711 32.000 0.00 0.00 0.00 2.66
4608 4635 4.130118 CTGACAGTAAATGGGTATGAGCC 58.870 47.826 0.00 0.00 36.00 4.70
4692 4719 2.949451 AGACACTGCGGTATCAAGAG 57.051 50.000 6.74 0.00 0.00 2.85
4701 4728 2.724977 TCTACAGAAAGACACTGCGG 57.275 50.000 0.00 0.00 38.74 5.69
4702 4729 4.987832 AGTATCTACAGAAAGACACTGCG 58.012 43.478 0.00 0.00 32.07 5.18
4704 4731 8.057536 ACCTTAGTATCTACAGAAAGACACTG 57.942 38.462 0.00 0.00 34.22 3.66
4708 4735 9.953697 CATGTACCTTAGTATCTACAGAAAGAC 57.046 37.037 0.00 0.00 0.00 3.01
4728 4755 4.202050 GGGGATGCAATGAACTTCATGTAC 60.202 45.833 4.99 0.00 37.15 2.90
4749 4776 0.912486 CAAGGTCCTTCTACAGGGGG 59.088 60.000 0.00 0.00 44.12 5.40
4750 4777 1.657804 ACAAGGTCCTTCTACAGGGG 58.342 55.000 0.00 0.00 44.12 4.79
4751 4778 5.045869 TCAATAACAAGGTCCTTCTACAGGG 60.046 44.000 0.00 0.00 44.12 4.45
4752 4779 6.049955 TCAATAACAAGGTCCTTCTACAGG 57.950 41.667 0.00 0.00 45.64 4.00
4753 4780 8.567285 AAATCAATAACAAGGTCCTTCTACAG 57.433 34.615 0.00 0.00 0.00 2.74
4754 4781 8.934023 AAAATCAATAACAAGGTCCTTCTACA 57.066 30.769 0.00 0.00 0.00 2.74
4755 4782 9.626045 CAAAAATCAATAACAAGGTCCTTCTAC 57.374 33.333 0.00 0.00 0.00 2.59
4756 4783 9.362151 ACAAAAATCAATAACAAGGTCCTTCTA 57.638 29.630 0.00 0.00 0.00 2.10
4757 4784 8.250143 ACAAAAATCAATAACAAGGTCCTTCT 57.750 30.769 0.00 0.00 0.00 2.85
4758 4785 8.887036 AACAAAAATCAATAACAAGGTCCTTC 57.113 30.769 0.00 0.00 0.00 3.46
4759 4786 9.325198 GAAACAAAAATCAATAACAAGGTCCTT 57.675 29.630 0.00 0.00 0.00 3.36
4760 4787 8.704668 AGAAACAAAAATCAATAACAAGGTCCT 58.295 29.630 0.00 0.00 0.00 3.85
4761 4788 8.764287 CAGAAACAAAAATCAATAACAAGGTCC 58.236 33.333 0.00 0.00 0.00 4.46
4762 4789 8.764287 CCAGAAACAAAAATCAATAACAAGGTC 58.236 33.333 0.00 0.00 0.00 3.85
4763 4790 7.226523 GCCAGAAACAAAAATCAATAACAAGGT 59.773 33.333 0.00 0.00 0.00 3.50
4764 4791 7.442062 AGCCAGAAACAAAAATCAATAACAAGG 59.558 33.333 0.00 0.00 0.00 3.61
4765 4792 8.369218 AGCCAGAAACAAAAATCAATAACAAG 57.631 30.769 0.00 0.00 0.00 3.16
4766 4793 8.610896 CAAGCCAGAAACAAAAATCAATAACAA 58.389 29.630 0.00 0.00 0.00 2.83
4767 4794 7.226325 CCAAGCCAGAAACAAAAATCAATAACA 59.774 33.333 0.00 0.00 0.00 2.41
4768 4795 7.307930 CCCAAGCCAGAAACAAAAATCAATAAC 60.308 37.037 0.00 0.00 0.00 1.89
4783 4810 2.175499 CCCTATCAATCCCAAGCCAGAA 59.825 50.000 0.00 0.00 0.00 3.02
4800 4827 0.324368 ACATCAGAGTCGCCACCCTA 60.324 55.000 0.00 0.00 0.00 3.53
4860 4887 2.273370 GTCGAAGATGCACCGACTAA 57.727 50.000 19.03 0.00 46.24 2.24
4862 4889 4.891566 GTCGAAGATGCACCGACT 57.108 55.556 19.03 3.01 46.24 4.18
4865 4892 1.560923 CCTAAGTCGAAGATGCACCG 58.439 55.000 0.00 0.00 40.67 4.94
4866 4893 1.207329 ACCCTAAGTCGAAGATGCACC 59.793 52.381 0.00 0.00 40.67 5.01
4899 4934 5.784177 TGGAGAACTTGTGTCTTCAGATAC 58.216 41.667 0.00 0.00 36.80 2.24
4903 4938 3.397482 CCTGGAGAACTTGTGTCTTCAG 58.603 50.000 3.16 3.16 0.00 3.02
4909 4944 3.788227 TTATGCCTGGAGAACTTGTGT 57.212 42.857 0.00 0.00 0.00 3.72
4911 4946 5.184892 AGATTTATGCCTGGAGAACTTGT 57.815 39.130 0.00 0.00 0.00 3.16
4912 4947 5.163581 CCAAGATTTATGCCTGGAGAACTTG 60.164 44.000 0.00 0.00 0.00 3.16
4956 4991 4.928615 CCTTCTATGCTGATTCTCGGATTC 59.071 45.833 0.00 0.00 0.00 2.52
4958 4993 3.900601 ACCTTCTATGCTGATTCTCGGAT 59.099 43.478 0.00 0.00 0.00 4.18
4959 4994 3.068732 CACCTTCTATGCTGATTCTCGGA 59.931 47.826 0.00 0.00 0.00 4.55
4960 4995 3.388308 CACCTTCTATGCTGATTCTCGG 58.612 50.000 0.00 0.00 0.00 4.63
4975 5011 3.282885 CTTCCCTAGATTTGCCACCTTC 58.717 50.000 0.00 0.00 0.00 3.46
4978 5014 2.808906 ACTTCCCTAGATTTGCCACC 57.191 50.000 0.00 0.00 0.00 4.61
5002 5038 6.045072 ACATCAACTAATTTGGTACGGAGA 57.955 37.500 0.00 0.00 35.69 3.71
5043 5079 9.457436 TTTGTCTACATACGGATATATCTAGCA 57.543 33.333 12.42 5.49 0.00 3.49
5051 5087 8.251721 GCCTTAGATTTGTCTACATACGGATAT 58.748 37.037 0.00 0.00 0.00 1.63
5052 5088 7.231925 TGCCTTAGATTTGTCTACATACGGATA 59.768 37.037 0.00 0.00 0.00 2.59
5061 5097 9.774742 CAAATTAGTTGCCTTAGATTTGTCTAC 57.225 33.333 0.00 0.00 32.62 2.59
5063 5099 7.093771 CCCAAATTAGTTGCCTTAGATTTGTCT 60.094 37.037 0.00 0.00 35.74 3.41
5076 5112 0.175531 ATGCGCCCCAAATTAGTTGC 59.824 50.000 4.18 0.00 35.74 4.17
5077 5113 4.320608 AATATGCGCCCCAAATTAGTTG 57.679 40.909 4.18 0.00 36.94 3.16
5090 5126 5.282510 ACTCTGTAAGTCTGTAATATGCGC 58.717 41.667 0.00 0.00 30.02 6.09
5093 5129 7.856398 CCACGTACTCTGTAAGTCTGTAATATG 59.144 40.741 0.00 0.00 39.55 1.78
5095 5131 7.105588 TCCACGTACTCTGTAAGTCTGTAATA 58.894 38.462 0.00 0.00 39.55 0.98
5096 5132 5.942236 TCCACGTACTCTGTAAGTCTGTAAT 59.058 40.000 0.00 0.00 39.55 1.89
5098 5134 4.898320 TCCACGTACTCTGTAAGTCTGTA 58.102 43.478 0.00 0.00 39.55 2.74
5100 5136 4.663166 CATCCACGTACTCTGTAAGTCTG 58.337 47.826 0.00 0.00 39.55 3.51
5102 5138 3.128938 AGCATCCACGTACTCTGTAAGTC 59.871 47.826 0.00 0.00 39.55 3.01
5103 5139 3.090037 AGCATCCACGTACTCTGTAAGT 58.910 45.455 0.00 0.00 42.33 2.24
5104 5140 3.128764 TCAGCATCCACGTACTCTGTAAG 59.871 47.826 0.00 0.00 0.00 2.34
5105 5141 3.086282 TCAGCATCCACGTACTCTGTAA 58.914 45.455 0.00 0.00 0.00 2.41
5126 5162 7.754851 TCCGCCTACTCTTTTTCTTTTTAAT 57.245 32.000 0.00 0.00 0.00 1.40
5145 5181 0.868406 GTTGTATGCTAGCATCCGCC 59.132 55.000 32.76 18.84 39.83 6.13
5224 5260 2.477845 CACTAGCAGCAACAGCGC 59.522 61.111 0.00 0.00 37.01 5.92
5225 5261 0.737367 TAGCACTAGCAGCAACAGCG 60.737 55.000 10.05 0.00 45.49 5.18
5257 5296 2.553765 ATCCAGCAAGCAGAGCAGGG 62.554 60.000 6.63 3.84 38.96 4.45
5263 5302 1.001764 CACCCATCCAGCAAGCAGA 60.002 57.895 0.00 0.00 0.00 4.26
5345 5384 9.146984 CGAAACAAGAACCAGATTACAGTATTA 57.853 33.333 0.00 0.00 0.00 0.98
5352 5391 4.213482 AGCACGAAACAAGAACCAGATTAC 59.787 41.667 0.00 0.00 0.00 1.89
5353 5392 4.385825 AGCACGAAACAAGAACCAGATTA 58.614 39.130 0.00 0.00 0.00 1.75
5383 5422 3.684788 AGGAAAACGAAATCACAGATCCG 59.315 43.478 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.