Multiple sequence alignment - TraesCS4B01G378700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G378700 chr4B 100.000 6268 0 0 1 6268 660470484 660464217 0.000000e+00 11575.0
1 TraesCS4B01G378700 chr4B 94.915 59 2 1 4954 5012 452727341 452727398 2.410000e-14 91.6
2 TraesCS4B01G378700 chr5A 93.810 2391 104 24 2576 4957 700349246 700351601 0.000000e+00 3555.0
3 TraesCS4B01G378700 chr5A 92.723 1168 41 15 781 1931 700347407 700348547 0.000000e+00 1646.0
4 TraesCS4B01G378700 chr5A 93.470 781 41 9 1 773 700346566 700347344 0.000000e+00 1151.0
5 TraesCS4B01G378700 chr5A 93.710 620 35 3 1950 2568 700348537 700349153 0.000000e+00 926.0
6 TraesCS4B01G378700 chr5A 82.595 632 49 40 5222 5846 700357992 700358569 9.380000e-138 501.0
7 TraesCS4B01G378700 chr5A 95.067 223 11 0 5015 5237 700351607 700351829 1.000000e-92 351.0
8 TraesCS4B01G378700 chr5A 83.125 160 22 3 6112 6268 398055888 398055731 2.360000e-29 141.0
9 TraesCS4B01G378700 chrUn 92.931 2433 114 27 2547 4954 110343513 110341114 0.000000e+00 3487.0
10 TraesCS4B01G378700 chrUn 91.720 1715 76 25 812 2517 110345168 110343511 0.000000e+00 2320.0
11 TraesCS4B01G378700 chrUn 91.381 789 50 13 1 773 110346107 110345321 0.000000e+00 1064.0
12 TraesCS4B01G378700 chrUn 86.489 1014 69 34 5015 5981 110341102 110340110 0.000000e+00 1051.0
13 TraesCS4B01G378700 chr7A 88.050 159 15 3 6114 6268 186533913 186533755 1.070000e-42 185.0
14 TraesCS4B01G378700 chr7D 85.000 160 19 4 6112 6268 69245147 69244990 2.340000e-34 158.0
15 TraesCS4B01G378700 chr7D 96.774 62 1 1 4952 5012 41446341 41446402 1.110000e-17 102.0
16 TraesCS4B01G378700 chr2D 84.277 159 20 4 6114 6268 366552242 366552399 3.910000e-32 150.0
17 TraesCS4B01G378700 chr2D 83.230 161 20 6 6112 6268 588171424 588171581 2.360000e-29 141.0
18 TraesCS4B01G378700 chr3A 84.277 159 16 4 6114 6268 223525482 223525635 5.060000e-31 147.0
19 TraesCS4B01G378700 chr3D 83.648 159 20 5 6114 6268 50397654 50397498 1.820000e-30 145.0
20 TraesCS4B01G378700 chr3D 87.879 66 8 0 6031 6096 528909963 528910028 1.870000e-10 78.7
21 TraesCS4B01G378700 chr6A 83.871 155 20 4 6112 6263 525018156 525018308 6.550000e-30 143.0
22 TraesCS4B01G378700 chr1D 83.019 159 23 3 6114 6268 197732640 197732798 2.360000e-29 141.0
23 TraesCS4B01G378700 chr1D 96.610 59 2 0 4954 5012 411564275 411564333 1.440000e-16 99.0
24 TraesCS4B01G378700 chr1B 100.000 59 0 0 4954 5012 593149616 593149674 6.640000e-20 110.0
25 TraesCS4B01G378700 chr1B 95.000 60 2 1 4953 5012 70173875 70173933 6.690000e-15 93.5
26 TraesCS4B01G378700 chr7B 96.721 61 2 0 4952 5012 463457650 463457590 1.110000e-17 102.0
27 TraesCS4B01G378700 chr7B 96.610 59 2 0 4954 5012 17211283 17211225 1.440000e-16 99.0
28 TraesCS4B01G378700 chr2B 96.610 59 2 0 4954 5012 638750565 638750507 1.440000e-16 99.0
29 TraesCS4B01G378700 chr6B 95.000 60 2 1 4953 5012 64193648 64193590 6.690000e-15 93.5
30 TraesCS4B01G378700 chr2A 90.625 64 6 0 6007 6070 726106625 726106562 1.120000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G378700 chr4B 660464217 660470484 6267 True 11575.0 11575 100.00000 1 6268 1 chr4B.!!$R1 6267
1 TraesCS4B01G378700 chr5A 700346566 700351829 5263 False 1525.8 3555 93.75600 1 5237 5 chr5A.!!$F2 5236
2 TraesCS4B01G378700 chr5A 700357992 700358569 577 False 501.0 501 82.59500 5222 5846 1 chr5A.!!$F1 624
3 TraesCS4B01G378700 chrUn 110340110 110346107 5997 True 1980.5 3487 90.63025 1 5981 4 chrUn.!!$R1 5980

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
446 450 0.179089 CGGAGTTCCTGATCAGCCTG 60.179 60.0 17.76 4.13 0.00 4.85 F
954 1115 0.458025 GCCAAGAGTAGACGAACGGG 60.458 60.0 0.00 0.00 0.00 5.28 F
2281 2442 0.753262 CTGGTAGCGGCCATTAGTCT 59.247 55.0 2.24 0.00 37.96 3.24 F
3277 3530 0.322816 GGATTCAGTTCCCAGCTGCA 60.323 55.0 8.66 0.00 34.21 4.41 F
4984 5266 1.235724 GCTTTCGCCCCGCTTTATAT 58.764 50.0 0.00 0.00 0.00 0.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1957 2118 0.682532 TGTTGCCACACCAAGCAGAA 60.683 50.000 0.0 0.0 40.73 3.02 R
2493 2654 1.334869 AGTGCTGCTTGGAAGAAAACG 59.665 47.619 0.0 0.0 0.00 3.60 R
3464 3717 0.972471 TGGAGCAGGAGCATCTTCGA 60.972 55.000 0.0 0.0 45.49 3.71 R
5240 5522 0.108186 TCATGCTGGGACACTTAGCG 60.108 55.000 0.0 0.0 40.24 4.26 R
5986 6315 0.038310 GGGAGGTGGAGAAACCCAAG 59.962 60.000 0.0 0.0 41.54 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 3.785486 TGTGGATTACTTCATCGAGCTG 58.215 45.455 0.00 0.00 0.00 4.24
110 111 1.337260 GCCGGATGCAGATTCTATCGT 60.337 52.381 5.05 0.00 40.77 3.73
255 256 2.291540 TGGAATTGCCTCTTGGTAAGGG 60.292 50.000 0.00 0.00 41.12 3.95
259 260 1.750780 GCCTCTTGGTAAGGGCTGC 60.751 63.158 11.40 0.00 39.95 5.25
321 325 1.373590 ATTTGGTCCACCATACGCGC 61.374 55.000 5.73 0.00 46.97 6.86
374 378 1.661341 CCTTCAAGGAGATGCCGAAG 58.339 55.000 0.00 0.00 43.43 3.79
389 393 1.671742 GAAGGAAGGGTGCTCGACA 59.328 57.895 0.00 0.00 0.00 4.35
416 420 4.832608 GGGTCCGTGGCGTGGATC 62.833 72.222 0.55 0.10 37.93 3.36
446 450 0.179089 CGGAGTTCCTGATCAGCCTG 60.179 60.000 17.76 4.13 0.00 4.85
611 615 4.501571 CCGGTGTATATCAAGGTGAAGAGG 60.502 50.000 0.00 0.00 0.00 3.69
626 630 2.048127 AGGAGAAGCAACGCGACC 60.048 61.111 15.93 0.00 0.00 4.79
659 663 1.006825 GCCGGCGATTTTGTTGTTCC 61.007 55.000 12.58 0.00 0.00 3.62
660 664 0.596082 CCGGCGATTTTGTTGTTCCT 59.404 50.000 9.30 0.00 0.00 3.36
661 665 1.401018 CCGGCGATTTTGTTGTTCCTC 60.401 52.381 9.30 0.00 0.00 3.71
716 736 6.748132 AGAACACAAATTACATGTCCAAAGG 58.252 36.000 0.00 0.00 0.00 3.11
728 748 6.129179 ACATGTCCAAAGGAAGAAAGAAAGA 58.871 36.000 0.00 0.00 31.38 2.52
774 794 6.597562 AGAACTGTTACACCTGTGGATTTTA 58.402 36.000 1.91 0.00 34.19 1.52
776 796 7.390718 AGAACTGTTACACCTGTGGATTTTATC 59.609 37.037 1.91 0.00 34.19 1.75
777 797 6.779860 ACTGTTACACCTGTGGATTTTATCT 58.220 36.000 1.91 0.00 34.19 1.98
778 798 6.655003 ACTGTTACACCTGTGGATTTTATCTG 59.345 38.462 1.91 0.00 34.19 2.90
779 799 6.539173 TGTTACACCTGTGGATTTTATCTGT 58.461 36.000 1.91 0.00 34.19 3.41
780 800 7.001674 TGTTACACCTGTGGATTTTATCTGTT 58.998 34.615 1.91 0.00 34.19 3.16
781 801 5.964958 ACACCTGTGGATTTTATCTGTTG 57.035 39.130 1.91 0.00 34.19 3.33
782 802 5.630121 ACACCTGTGGATTTTATCTGTTGA 58.370 37.500 1.91 0.00 34.19 3.18
847 987 2.694240 TTGGATGATGGGCCGGGA 60.694 61.111 2.18 0.00 0.00 5.14
859 999 3.047735 CCGGGAAGGCACCAAAAC 58.952 61.111 0.00 0.00 0.00 2.43
872 1012 0.609131 CCAAAACTGAGACGGCCCAT 60.609 55.000 0.00 0.00 0.00 4.00
892 1032 2.426023 GCCATAGGCGGTACAGGG 59.574 66.667 0.00 0.00 39.62 4.45
893 1033 2.138179 GCCATAGGCGGTACAGGGA 61.138 63.158 0.00 0.00 39.62 4.20
894 1034 2.050269 CCATAGGCGGTACAGGGAG 58.950 63.158 0.00 0.00 0.00 4.30
895 1035 1.472662 CCATAGGCGGTACAGGGAGG 61.473 65.000 0.00 0.00 0.00 4.30
896 1036 1.152312 ATAGGCGGTACAGGGAGGG 60.152 63.158 0.00 0.00 0.00 4.30
934 1088 3.327404 GGAAGGGGAACGGAGGCA 61.327 66.667 0.00 0.00 0.00 4.75
954 1115 0.458025 GCCAAGAGTAGACGAACGGG 60.458 60.000 0.00 0.00 0.00 5.28
1143 1304 1.561076 CACCAATCCACATCCTCCTCA 59.439 52.381 0.00 0.00 0.00 3.86
1144 1305 1.561542 ACCAATCCACATCCTCCTCAC 59.438 52.381 0.00 0.00 0.00 3.51
1150 1311 1.381872 ACATCCTCCTCACCCTCCG 60.382 63.158 0.00 0.00 0.00 4.63
1151 1312 2.136878 CATCCTCCTCACCCTCCGG 61.137 68.421 0.00 0.00 0.00 5.14
1152 1313 4.779733 TCCTCCTCACCCTCCGGC 62.780 72.222 0.00 0.00 0.00 6.13
1470 1631 4.873129 TTCATCGCGCGCCTCCTC 62.873 66.667 27.95 0.00 0.00 3.71
1570 1731 1.804372 GCACCATGAAGAGCCTCTACG 60.804 57.143 0.00 0.00 0.00 3.51
1679 1840 3.520862 CATGACGCACCCCATGGC 61.521 66.667 6.09 0.00 37.19 4.40
1735 1896 3.394836 GCCTCAAGGAGCTCCGGT 61.395 66.667 26.95 16.38 42.08 5.28
1860 2021 0.957362 GCAAGAAGACCAAGCAGCTT 59.043 50.000 0.21 0.21 0.00 3.74
1923 2084 1.826385 GCAGGTAGCAAATCCACACT 58.174 50.000 0.00 0.00 44.79 3.55
1925 2086 3.545703 GCAGGTAGCAAATCCACACTAT 58.454 45.455 0.00 0.00 44.79 2.12
1926 2087 3.947834 GCAGGTAGCAAATCCACACTATT 59.052 43.478 0.00 0.00 44.79 1.73
1927 2088 5.123227 GCAGGTAGCAAATCCACACTATTA 58.877 41.667 0.00 0.00 44.79 0.98
1928 2089 5.588648 GCAGGTAGCAAATCCACACTATTAA 59.411 40.000 0.00 0.00 44.79 1.40
1929 2090 6.263168 GCAGGTAGCAAATCCACACTATTAAT 59.737 38.462 0.00 0.00 44.79 1.40
1932 2093 6.770785 GGTAGCAAATCCACACTATTAATCCA 59.229 38.462 0.00 0.00 0.00 3.41
1934 2095 5.296780 AGCAAATCCACACTATTAATCCACG 59.703 40.000 0.00 0.00 0.00 4.94
1936 2097 6.715464 CAAATCCACACTATTAATCCACGAC 58.285 40.000 0.00 0.00 0.00 4.34
1937 2098 5.607939 ATCCACACTATTAATCCACGACA 57.392 39.130 0.00 0.00 0.00 4.35
1940 2101 6.046593 TCCACACTATTAATCCACGACATTC 58.953 40.000 0.00 0.00 0.00 2.67
1941 2102 5.051039 CCACACTATTAATCCACGACATTCG 60.051 44.000 0.00 0.00 46.93 3.34
1942 2103 5.746721 CACACTATTAATCCACGACATTCGA 59.253 40.000 1.94 0.00 43.74 3.71
1943 2104 5.747197 ACACTATTAATCCACGACATTCGAC 59.253 40.000 1.94 0.00 43.74 4.20
1944 2105 5.746721 CACTATTAATCCACGACATTCGACA 59.253 40.000 1.94 0.00 43.74 4.35
1946 2107 5.907197 ATTAATCCACGACATTCGACATC 57.093 39.130 1.94 0.00 43.74 3.06
1947 2108 2.959507 ATCCACGACATTCGACATCA 57.040 45.000 1.94 0.00 43.74 3.07
1950 2111 2.165437 TCCACGACATTCGACATCATCA 59.835 45.455 1.94 0.00 43.74 3.07
1951 2112 3.126073 CCACGACATTCGACATCATCAT 58.874 45.455 1.94 0.00 43.74 2.45
1957 2118 8.650714 CACGACATTCGACATCATCATTATTAT 58.349 33.333 1.94 0.00 43.74 1.28
1970 2131 7.933396 TCATCATTATTATTCTGCTTGGTGTG 58.067 34.615 0.00 0.00 0.00 3.82
2012 2173 1.293062 ATGGACAGTCAGGCATCCTT 58.707 50.000 2.17 0.00 32.06 3.36
2273 2434 1.199327 GAAAAGAAACTGGTAGCGGCC 59.801 52.381 0.00 0.00 0.00 6.13
2281 2442 0.753262 CTGGTAGCGGCCATTAGTCT 59.247 55.000 2.24 0.00 37.96 3.24
2298 2459 7.972277 CCATTAGTCTCTTGTTTTCCATTCATG 59.028 37.037 0.00 0.00 0.00 3.07
2362 2523 1.745653 GGTCTATGCCCTGCAGAAAAC 59.254 52.381 17.39 1.55 43.65 2.43
2369 2530 1.406887 GCCCTGCAGAAAACGAGGATA 60.407 52.381 17.39 0.00 0.00 2.59
2370 2531 2.939640 GCCCTGCAGAAAACGAGGATAA 60.940 50.000 17.39 0.00 0.00 1.75
2371 2532 2.678336 CCCTGCAGAAAACGAGGATAAC 59.322 50.000 17.39 0.00 0.00 1.89
2389 2550 3.914426 AACGCTCCTAACAAGGATGAT 57.086 42.857 0.00 0.00 37.34 2.45
2420 2581 3.119352 GGTAAATGCAGAGGCTTCCTTTG 60.119 47.826 0.00 0.00 41.91 2.77
2425 2586 2.903784 TGCAGAGGCTTCCTTTGTACTA 59.096 45.455 5.47 0.00 37.94 1.82
2482 2643 2.572284 CGGGTGAGAGGTTCCGTC 59.428 66.667 0.00 0.00 37.92 4.79
2493 2654 1.071857 AGGTTCCGTCCTTGTTTCTCC 59.928 52.381 0.00 0.00 33.52 3.71
2635 2882 6.716934 TCTAGGCACTCTTTACCTCTATTG 57.283 41.667 0.00 0.00 41.75 1.90
2712 2959 1.971357 AGCCGAAGAACAGAGAAAGGA 59.029 47.619 0.00 0.00 0.00 3.36
2817 3064 3.133691 TGCAGGAATGCATATCGAGAAC 58.866 45.455 0.00 0.00 40.23 3.01
2846 3093 0.790814 GGTAACTGCAGCGTGTCTTC 59.209 55.000 15.27 0.00 0.00 2.87
2873 3120 6.221659 TGCAGTCAGATCAATCTAATAGCAG 58.778 40.000 0.00 0.00 34.85 4.24
2925 3172 7.337938 TCTGCACATATGTATCCTTTTCTTCA 58.662 34.615 8.32 0.00 0.00 3.02
2956 3203 9.720769 TGCAAGTTTATTTTCTTACTAGCTACT 57.279 29.630 0.00 0.00 0.00 2.57
2969 3216 8.027771 TCTTACTAGCTACTAAAACTTGTCAGC 58.972 37.037 0.00 0.00 0.00 4.26
3005 3252 7.558444 TGAACCCTTCATAACACTTTAACTTGT 59.442 33.333 0.00 0.00 34.08 3.16
3027 3274 6.664515 TGTTTTTAACAAGGTTATGCGAGAG 58.335 36.000 0.00 0.00 38.72 3.20
3138 3385 0.550914 TCCTGGATGGGGAATTTCCG 59.449 55.000 9.31 0.00 37.43 4.30
3277 3530 0.322816 GGATTCAGTTCCCAGCTGCA 60.323 55.000 8.66 0.00 34.21 4.41
3309 3562 6.199376 AGGTTCTGTAAAGGGAAAAGGAAAA 58.801 36.000 0.00 0.00 0.00 2.29
3310 3563 6.323996 AGGTTCTGTAAAGGGAAAAGGAAAAG 59.676 38.462 0.00 0.00 0.00 2.27
3311 3564 6.462487 GGTTCTGTAAAGGGAAAAGGAAAAGG 60.462 42.308 0.00 0.00 0.00 3.11
3312 3565 6.020881 TCTGTAAAGGGAAAAGGAAAAGGA 57.979 37.500 0.00 0.00 0.00 3.36
3313 3566 6.436890 TCTGTAAAGGGAAAAGGAAAAGGAA 58.563 36.000 0.00 0.00 0.00 3.36
3314 3567 6.898521 TCTGTAAAGGGAAAAGGAAAAGGAAA 59.101 34.615 0.00 0.00 0.00 3.13
3315 3568 7.069455 TCTGTAAAGGGAAAAGGAAAAGGAAAG 59.931 37.037 0.00 0.00 0.00 2.62
3316 3569 5.630415 AAAGGGAAAAGGAAAAGGAAAGG 57.370 39.130 0.00 0.00 0.00 3.11
3321 3574 4.485875 GAAAAGGAAAAGGAAAGGGGGTA 58.514 43.478 0.00 0.00 0.00 3.69
3464 3717 7.246171 ACATTAATGTCTCTAAGGTGTCTGT 57.754 36.000 15.47 0.00 35.87 3.41
3493 3746 2.268280 CTGCTCCAGCCTCCACTG 59.732 66.667 0.00 0.00 41.18 3.66
3494 3747 2.527624 TGCTCCAGCCTCCACTGT 60.528 61.111 0.00 0.00 41.18 3.55
3507 3760 3.003689 CCTCCACTGTTGACAATGTTGAC 59.996 47.826 0.00 0.00 0.00 3.18
3531 3784 4.250464 ACTTGATTGATGCCAAAATGCTG 58.750 39.130 0.00 0.00 35.67 4.41
3564 3817 4.631813 CAGTTTTATGCCCTAGACAGTGAC 59.368 45.833 0.00 0.00 0.00 3.67
3801 4054 4.909695 TCCCTGATGATGATACCTGTTGAT 59.090 41.667 0.00 0.00 0.00 2.57
3802 4055 5.012458 TCCCTGATGATGATACCTGTTGATC 59.988 44.000 0.00 0.00 0.00 2.92
3803 4056 5.221783 CCCTGATGATGATACCTGTTGATCA 60.222 44.000 0.00 0.00 36.54 2.92
3804 4057 5.932883 CCTGATGATGATACCTGTTGATCAG 59.067 44.000 0.00 0.00 43.27 2.90
3830 4083 5.063204 CAGGTGGTGTTTCAGTTGAATCTA 58.937 41.667 0.00 0.00 33.54 1.98
3880 4134 2.997485 CAACTTCTGCTTGGCCTTAC 57.003 50.000 3.32 0.00 0.00 2.34
3949 4203 2.936498 GGCTGCTACGCTTTAATCAAGA 59.064 45.455 0.00 0.00 33.80 3.02
3999 4274 5.567138 ATGCTGGCTTACACTTTATGAAC 57.433 39.130 0.00 0.00 0.00 3.18
4000 4275 4.393834 TGCTGGCTTACACTTTATGAACA 58.606 39.130 0.00 0.00 0.00 3.18
4024 4302 9.857656 ACATTTCATATTCTTCTGGTACATGAT 57.142 29.630 0.00 0.00 38.20 2.45
4166 4444 2.565841 GAAGGATATGCAGGTGACACC 58.434 52.381 17.43 17.43 38.99 4.16
4232 4510 7.574967 CGTGTTTTTACTGGCTGAATTCCTAAT 60.575 37.037 2.27 0.00 0.00 1.73
4238 4516 6.029346 ACTGGCTGAATTCCTAATTTGTTG 57.971 37.500 2.27 0.00 0.00 3.33
4472 4750 6.818644 CCATGATTAGGTATTACAAGATCCCG 59.181 42.308 0.00 0.00 0.00 5.14
4475 4753 7.011994 TGATTAGGTATTACAAGATCCCGGTA 58.988 38.462 0.00 0.00 0.00 4.02
4565 4843 4.974645 ACAGATGGTCTTTACACAAGGA 57.025 40.909 0.00 0.00 0.00 3.36
4566 4844 4.642429 ACAGATGGTCTTTACACAAGGAC 58.358 43.478 0.00 0.00 39.42 3.85
4583 4861 3.027974 GGACTGTCCTATTCGGTATGC 57.972 52.381 19.53 0.00 32.53 3.14
4594 4872 4.668576 ATTCGGTATGCGCAAATCATAG 57.331 40.909 17.11 2.46 0.00 2.23
4601 4879 5.853282 GGTATGCGCAAATCATAGTTCATTC 59.147 40.000 17.11 0.00 0.00 2.67
4608 4886 5.302568 GCAAATCATAGTTCATTCCCATGGA 59.697 40.000 15.22 0.00 0.00 3.41
4611 4889 6.966534 ATCATAGTTCATTCCCATGGAAAC 57.033 37.500 15.22 9.26 45.41 2.78
4625 4903 4.399303 CCATGGAAACCAAAGTCCAGTATC 59.601 45.833 5.56 0.00 46.87 2.24
4626 4904 4.715534 TGGAAACCAAAGTCCAGTATCA 57.284 40.909 0.00 0.00 39.04 2.15
4627 4905 5.255397 TGGAAACCAAAGTCCAGTATCAT 57.745 39.130 0.00 0.00 39.04 2.45
4628 4906 5.253330 TGGAAACCAAAGTCCAGTATCATC 58.747 41.667 0.00 0.00 39.04 2.92
4642 4920 2.945447 ATCATCCATTGTTGGTTGCG 57.055 45.000 0.00 0.00 44.06 4.85
4678 4957 5.048713 GCTTACTACTGGTGTGCTCATTTTT 60.049 40.000 0.00 0.00 0.00 1.94
4769 5048 3.142838 CTGCATTTCCCCCGGCTG 61.143 66.667 0.00 0.00 0.00 4.85
4892 5171 3.081409 CCGTCGGAGGATGGGGTT 61.081 66.667 4.91 0.00 44.30 4.11
4921 5200 3.642705 ACGACGTGAGGTAAAACTAACC 58.357 45.455 0.00 0.00 37.27 2.85
4957 5239 6.633500 TGTGGCAAAGCAGATATAATTACC 57.367 37.500 0.00 0.00 0.00 2.85
4958 5240 5.238432 TGTGGCAAAGCAGATATAATTACCG 59.762 40.000 0.00 0.00 0.00 4.02
4959 5241 5.468746 GTGGCAAAGCAGATATAATTACCGA 59.531 40.000 0.00 0.00 0.00 4.69
4960 5242 6.017440 GTGGCAAAGCAGATATAATTACCGAA 60.017 38.462 0.00 0.00 0.00 4.30
4961 5243 6.544197 TGGCAAAGCAGATATAATTACCGAAA 59.456 34.615 0.00 0.00 0.00 3.46
4962 5244 7.067615 TGGCAAAGCAGATATAATTACCGAAAA 59.932 33.333 0.00 0.00 0.00 2.29
4963 5245 7.918562 GGCAAAGCAGATATAATTACCGAAAAA 59.081 33.333 0.00 0.00 0.00 1.94
4964 5246 8.958043 GCAAAGCAGATATAATTACCGAAAAAG 58.042 33.333 0.00 0.00 0.00 2.27
4965 5247 9.450807 CAAAGCAGATATAATTACCGAAAAAGG 57.549 33.333 0.00 0.00 37.30 3.11
4966 5248 7.203255 AGCAGATATAATTACCGAAAAAGGC 57.797 36.000 0.00 0.00 33.69 4.35
4967 5249 6.998673 AGCAGATATAATTACCGAAAAAGGCT 59.001 34.615 0.00 0.00 33.69 4.58
4968 5250 7.502561 AGCAGATATAATTACCGAAAAAGGCTT 59.497 33.333 0.00 0.00 33.69 4.35
4969 5251 8.135529 GCAGATATAATTACCGAAAAAGGCTTT 58.864 33.333 6.68 6.68 33.69 3.51
4970 5252 9.665264 CAGATATAATTACCGAAAAAGGCTTTC 57.335 33.333 13.76 0.41 33.69 2.62
4972 5254 2.691984 TTACCGAAAAAGGCTTTCGC 57.308 45.000 13.76 7.41 46.89 4.70
4982 5264 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
4983 5265 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
4984 5266 1.235724 GCTTTCGCCCCGCTTTATAT 58.764 50.000 0.00 0.00 0.00 0.86
4985 5267 2.419667 GCTTTCGCCCCGCTTTATATA 58.580 47.619 0.00 0.00 0.00 0.86
4986 5268 3.007635 GCTTTCGCCCCGCTTTATATAT 58.992 45.455 0.00 0.00 0.00 0.86
4987 5269 4.186159 GCTTTCGCCCCGCTTTATATATA 58.814 43.478 0.00 0.00 0.00 0.86
4988 5270 4.632688 GCTTTCGCCCCGCTTTATATATAA 59.367 41.667 0.81 0.81 0.00 0.98
4989 5271 5.122711 GCTTTCGCCCCGCTTTATATATAAA 59.877 40.000 15.47 15.47 0.00 1.40
5007 5289 7.768807 ATATAAAGCCACAACCAACTTACAA 57.231 32.000 0.00 0.00 0.00 2.41
5008 5290 3.793797 AAGCCACAACCAACTTACAAC 57.206 42.857 0.00 0.00 0.00 3.32
5009 5291 1.673920 AGCCACAACCAACTTACAACG 59.326 47.619 0.00 0.00 0.00 4.10
5010 5292 1.671845 GCCACAACCAACTTACAACGA 59.328 47.619 0.00 0.00 0.00 3.85
5011 5293 2.286772 GCCACAACCAACTTACAACGAG 60.287 50.000 0.00 0.00 0.00 4.18
5012 5294 3.199677 CCACAACCAACTTACAACGAGA 58.800 45.455 0.00 0.00 0.00 4.04
5013 5295 3.623960 CCACAACCAACTTACAACGAGAA 59.376 43.478 0.00 0.00 0.00 2.87
5093 5375 1.298713 CGCGATCGAGTTCCTGAGG 60.299 63.158 21.57 0.00 38.10 3.86
5240 5522 1.270358 ACGCTCAAGGAGTTTCTGGAC 60.270 52.381 0.00 0.00 31.39 4.02
5243 5525 1.001406 CTCAAGGAGTTTCTGGACGCT 59.999 52.381 0.00 0.00 0.00 5.07
5264 5546 0.463204 AGTGTCCCAGCATGATCTCG 59.537 55.000 0.00 0.00 39.69 4.04
5270 5552 1.604947 CCCAGCATGATCTCGTAGCAG 60.605 57.143 0.00 0.00 39.69 4.24
5343 5625 3.135225 TGTTGTGAACTATGGGTGTTCG 58.865 45.455 0.00 0.00 44.67 3.95
5349 5631 3.132289 TGAACTATGGGTGTTCGGAGATC 59.868 47.826 0.00 0.00 44.67 2.75
5358 5640 1.662629 TGTTCGGAGATCGTACTCGTC 59.337 52.381 0.00 0.00 39.42 4.20
5362 5644 1.805495 CGGAGATCGTACTCGTCAGGA 60.805 57.143 0.00 0.00 37.74 3.86
5363 5645 2.496111 GGAGATCGTACTCGTCAGGAT 58.504 52.381 0.00 0.00 37.74 3.24
5364 5646 2.879646 GGAGATCGTACTCGTCAGGATT 59.120 50.000 0.00 0.00 37.74 3.01
5369 5651 3.603532 TCGTACTCGTCAGGATTGTAGT 58.396 45.455 0.00 0.00 38.33 2.73
5376 5658 2.799917 CGTCAGGATTGTAGTGCTAGGC 60.800 54.545 0.00 0.00 0.00 3.93
5392 5674 5.753921 GTGCTAGGCTATTTGGTAGTGTAAG 59.246 44.000 0.00 0.00 32.72 2.34
5395 5677 5.615925 AGGCTATTTGGTAGTGTAAGGAG 57.384 43.478 0.00 0.00 32.72 3.69
5398 5680 5.358090 GCTATTTGGTAGTGTAAGGAGGAC 58.642 45.833 0.00 0.00 32.72 3.85
5399 5681 5.128991 GCTATTTGGTAGTGTAAGGAGGACT 59.871 44.000 0.00 0.00 32.72 3.85
5447 5744 4.967442 TCCATCCAAATCCAATGGCAAATA 59.033 37.500 0.00 0.00 39.86 1.40
5448 5745 5.607592 TCCATCCAAATCCAATGGCAAATAT 59.392 36.000 0.00 0.00 39.86 1.28
5493 5790 6.206243 AGCTGGCTTAATGATGCTGTAAATAG 59.794 38.462 0.00 0.00 0.00 1.73
5529 5826 5.106908 GCAGGTTAGAGTTGAGTAAAAGCTG 60.107 44.000 7.50 7.50 42.40 4.24
5581 5878 9.524106 AAAACTTGTACTGTACTTTTAAATGGC 57.476 29.630 17.98 0.05 0.00 4.40
5595 5892 8.734386 ACTTTTAAATGGCAAAAATTGAACACA 58.266 25.926 0.00 0.00 0.00 3.72
5599 5896 7.988904 AAATGGCAAAAATTGAACACAAATG 57.011 28.000 0.00 0.00 0.00 2.32
5600 5897 6.939132 ATGGCAAAAATTGAACACAAATGA 57.061 29.167 0.00 0.00 0.00 2.57
5601 5898 6.939132 TGGCAAAAATTGAACACAAATGAT 57.061 29.167 0.00 0.00 0.00 2.45
5602 5899 6.957150 TGGCAAAAATTGAACACAAATGATC 58.043 32.000 0.00 0.00 0.00 2.92
5678 6005 6.434028 TGGGATTTCTTGTTACCTTTCATGAG 59.566 38.462 0.00 0.00 0.00 2.90
5681 6008 7.176690 GGATTTCTTGTTACCTTTCATGAGGAA 59.823 37.037 7.95 0.00 39.25 3.36
5684 6011 9.581289 TTTCTTGTTACCTTTCATGAGGAATTA 57.419 29.630 7.95 0.00 39.25 1.40
5763 6090 9.236006 GGTGTGGATATCAGATTAAATATTGCT 57.764 33.333 4.83 0.00 0.00 3.91
5807 6134 9.727627 GGTTCAATATTTTGTTCATTTGCAAAA 57.272 25.926 17.19 0.00 44.99 2.44
5850 6179 9.051027 GCCGTTCATGAAAATATATGTATTTCG 57.949 33.333 10.35 4.15 39.09 3.46
5868 6197 9.047371 TGTATTTCGACAGACAAAGTTCAATAA 57.953 29.630 0.00 0.00 0.00 1.40
5902 6231 3.760580 TCAAAATCGGGCAAATTTGGT 57.239 38.095 19.47 0.00 34.39 3.67
5910 6239 2.159572 CGGGCAAATTTGGTAGAAGTCG 60.160 50.000 19.47 0.00 0.00 4.18
5922 6251 5.673514 TGGTAGAAGTCGTTGTAACCTTTT 58.326 37.500 0.00 0.00 0.00 2.27
5923 6252 5.754890 TGGTAGAAGTCGTTGTAACCTTTTC 59.245 40.000 0.00 0.00 0.00 2.29
5928 6257 6.704937 AGAAGTCGTTGTAACCTTTTCTTAGG 59.295 38.462 0.00 0.00 41.31 2.69
5935 6264 5.557866 TGTAACCTTTTCTTAGGGAGCTTC 58.442 41.667 0.00 0.00 39.76 3.86
5943 6272 2.957006 TCTTAGGGAGCTTCGGTACATC 59.043 50.000 0.00 0.00 0.00 3.06
5946 6275 2.308690 AGGGAGCTTCGGTACATCTAC 58.691 52.381 0.00 0.00 0.00 2.59
5947 6276 2.091775 AGGGAGCTTCGGTACATCTACT 60.092 50.000 0.00 0.00 0.00 2.57
5948 6277 3.137913 AGGGAGCTTCGGTACATCTACTA 59.862 47.826 0.00 0.00 0.00 1.82
5949 6278 3.887716 GGGAGCTTCGGTACATCTACTAA 59.112 47.826 0.00 0.00 0.00 2.24
5951 6280 4.023021 GGAGCTTCGGTACATCTACTAAGG 60.023 50.000 0.00 0.00 0.00 2.69
5952 6281 4.534797 AGCTTCGGTACATCTACTAAGGT 58.465 43.478 0.00 0.00 0.00 3.50
5953 6282 4.338682 AGCTTCGGTACATCTACTAAGGTG 59.661 45.833 0.00 0.00 39.95 4.00
5954 6283 4.337555 GCTTCGGTACATCTACTAAGGTGA 59.662 45.833 0.00 0.00 35.72 4.02
5955 6284 5.163581 GCTTCGGTACATCTACTAAGGTGAA 60.164 44.000 0.00 0.00 35.72 3.18
5956 6285 6.626623 GCTTCGGTACATCTACTAAGGTGAAA 60.627 42.308 0.00 0.00 35.72 2.69
5957 6286 7.414222 TTCGGTACATCTACTAAGGTGAAAT 57.586 36.000 0.00 0.00 35.72 2.17
5959 6288 6.832384 TCGGTACATCTACTAAGGTGAAATCT 59.168 38.462 0.00 0.00 35.72 2.40
5960 6289 7.341256 TCGGTACATCTACTAAGGTGAAATCTT 59.659 37.037 0.00 0.00 35.72 2.40
5991 6320 8.581253 AATGTATTTAGAGGAAAGAACTTGGG 57.419 34.615 0.00 0.00 0.00 4.12
5992 6321 7.086685 TGTATTTAGAGGAAAGAACTTGGGT 57.913 36.000 0.00 0.00 0.00 4.51
5993 6322 7.523415 TGTATTTAGAGGAAAGAACTTGGGTT 58.477 34.615 0.00 0.00 38.52 4.11
5994 6323 8.002459 TGTATTTAGAGGAAAGAACTTGGGTTT 58.998 33.333 0.00 0.00 35.58 3.27
5995 6324 6.954487 TTTAGAGGAAAGAACTTGGGTTTC 57.046 37.500 0.00 0.00 35.58 2.78
5996 6325 4.797912 AGAGGAAAGAACTTGGGTTTCT 57.202 40.909 0.00 0.00 35.58 2.52
5997 6326 4.720046 AGAGGAAAGAACTTGGGTTTCTC 58.280 43.478 0.00 0.00 35.58 2.87
5998 6327 3.821600 GAGGAAAGAACTTGGGTTTCTCC 59.178 47.826 0.00 0.00 35.58 3.71
5999 6328 3.204382 AGGAAAGAACTTGGGTTTCTCCA 59.796 43.478 0.00 0.00 35.58 3.86
6000 6329 3.318275 GGAAAGAACTTGGGTTTCTCCAC 59.682 47.826 0.00 0.00 36.38 4.02
6001 6330 2.658807 AGAACTTGGGTTTCTCCACC 57.341 50.000 0.00 0.00 36.38 4.61
6002 6331 2.136026 AGAACTTGGGTTTCTCCACCT 58.864 47.619 0.00 0.00 36.38 4.00
6003 6332 2.106684 AGAACTTGGGTTTCTCCACCTC 59.893 50.000 0.00 0.00 36.38 3.85
6004 6333 0.771755 ACTTGGGTTTCTCCACCTCC 59.228 55.000 0.00 0.00 36.38 4.30
6005 6334 0.038310 CTTGGGTTTCTCCACCTCCC 59.962 60.000 0.00 0.00 36.38 4.30
6006 6335 1.774894 TTGGGTTTCTCCACCTCCCG 61.775 60.000 0.00 0.00 40.86 5.14
6007 6336 2.046217 GGTTTCTCCACCTCCCGC 60.046 66.667 0.00 0.00 33.50 6.13
6008 6337 2.046217 GTTTCTCCACCTCCCGCC 60.046 66.667 0.00 0.00 0.00 6.13
6009 6338 3.702048 TTTCTCCACCTCCCGCCG 61.702 66.667 0.00 0.00 0.00 6.46
6023 6352 4.500116 GCCGGTCTGCCTCGTCTC 62.500 72.222 1.90 0.00 0.00 3.36
6024 6353 3.827898 CCGGTCTGCCTCGTCTCC 61.828 72.222 0.00 0.00 0.00 3.71
6025 6354 4.180946 CGGTCTGCCTCGTCTCCG 62.181 72.222 0.00 0.00 0.00 4.63
6026 6355 2.750637 GGTCTGCCTCGTCTCCGA 60.751 66.667 0.00 0.00 41.73 4.55
6027 6356 2.122167 GGTCTGCCTCGTCTCCGAT 61.122 63.158 0.00 0.00 43.27 4.18
6028 6357 1.064946 GTCTGCCTCGTCTCCGATG 59.935 63.158 0.00 0.00 43.27 3.84
6029 6358 2.121538 TCTGCCTCGTCTCCGATGG 61.122 63.158 0.00 0.00 43.27 3.51
6031 6360 4.593864 GCCTCGTCTCCGATGGCC 62.594 72.222 0.00 0.00 44.52 5.36
6032 6361 3.147595 CCTCGTCTCCGATGGCCA 61.148 66.667 8.56 8.56 43.27 5.36
6033 6362 2.502492 CCTCGTCTCCGATGGCCAT 61.502 63.158 20.96 20.96 43.27 4.40
6034 6363 1.179174 CCTCGTCTCCGATGGCCATA 61.179 60.000 20.84 1.54 43.27 2.74
6035 6364 0.242286 CTCGTCTCCGATGGCCATAG 59.758 60.000 20.84 19.38 43.27 2.23
6036 6365 1.179174 TCGTCTCCGATGGCCATAGG 61.179 60.000 32.95 32.95 38.40 2.57
6037 6366 1.674057 GTCTCCGATGGCCATAGGG 59.326 63.158 36.00 29.72 34.77 3.53
6047 6376 2.768344 CCATAGGGCCGTGGAGGT 60.768 66.667 21.99 0.00 43.70 3.85
6048 6377 2.505982 CATAGGGCCGTGGAGGTG 59.494 66.667 8.57 0.00 43.70 4.00
6049 6378 3.480133 ATAGGGCCGTGGAGGTGC 61.480 66.667 8.57 0.00 43.70 5.01
6057 6386 4.699522 GTGGAGGTGCGGTGGACC 62.700 72.222 0.00 0.00 0.00 4.46
6060 6389 4.394712 GAGGTGCGGTGGACCCTG 62.395 72.222 3.70 0.00 33.51 4.45
6067 6396 4.366684 GGTGGACCCTGGCCCTTG 62.367 72.222 0.00 0.00 0.00 3.61
6078 6407 3.650950 GCCCTTGCCTGTGGGAGA 61.651 66.667 1.75 0.00 46.15 3.71
6079 6408 2.673523 CCCTTGCCTGTGGGAGAG 59.326 66.667 0.00 0.00 46.15 3.20
6080 6409 1.920325 CCCTTGCCTGTGGGAGAGA 60.920 63.158 0.00 0.00 46.15 3.10
6081 6410 1.277580 CCCTTGCCTGTGGGAGAGAT 61.278 60.000 0.00 0.00 46.15 2.75
6082 6411 0.179936 CCTTGCCTGTGGGAGAGATC 59.820 60.000 0.00 0.00 33.58 2.75
6083 6412 1.202330 CTTGCCTGTGGGAGAGATCT 58.798 55.000 0.00 0.00 33.58 2.75
6084 6413 1.558756 CTTGCCTGTGGGAGAGATCTT 59.441 52.381 0.00 0.00 33.58 2.40
6085 6414 0.907486 TGCCTGTGGGAGAGATCTTG 59.093 55.000 0.00 0.00 33.58 3.02
6086 6415 0.463474 GCCTGTGGGAGAGATCTTGC 60.463 60.000 0.00 0.00 33.58 4.01
6087 6416 1.202330 CCTGTGGGAGAGATCTTGCT 58.798 55.000 0.00 0.00 33.58 3.91
6088 6417 1.138661 CCTGTGGGAGAGATCTTGCTC 59.861 57.143 0.00 0.00 35.11 4.26
6093 6422 2.682155 GGAGAGATCTTGCTCCGTTT 57.318 50.000 13.24 0.00 41.10 3.60
6094 6423 2.979240 GGAGAGATCTTGCTCCGTTTT 58.021 47.619 13.24 0.00 41.10 2.43
6095 6424 3.339141 GGAGAGATCTTGCTCCGTTTTT 58.661 45.455 13.24 0.00 41.10 1.94
6120 6449 8.973835 TTTGGTGTTTTCGTGATATTATTTCC 57.026 30.769 0.00 0.00 0.00 3.13
6121 6450 7.931578 TGGTGTTTTCGTGATATTATTTCCT 57.068 32.000 0.00 0.00 0.00 3.36
6122 6451 8.343168 TGGTGTTTTCGTGATATTATTTCCTT 57.657 30.769 0.00 0.00 0.00 3.36
6123 6452 8.798402 TGGTGTTTTCGTGATATTATTTCCTTT 58.202 29.630 0.00 0.00 0.00 3.11
6141 6470 9.948964 ATTTCCTTTAAAATTATCTGCTTGCTT 57.051 25.926 0.00 0.00 0.00 3.91
6143 6472 9.855021 TTCCTTTAAAATTATCTGCTTGCTTAC 57.145 29.630 0.00 0.00 0.00 2.34
6144 6473 9.243105 TCCTTTAAAATTATCTGCTTGCTTACT 57.757 29.630 0.00 0.00 0.00 2.24
6145 6474 9.508567 CCTTTAAAATTATCTGCTTGCTTACTC 57.491 33.333 0.00 0.00 0.00 2.59
6146 6475 9.508567 CTTTAAAATTATCTGCTTGCTTACTCC 57.491 33.333 0.00 0.00 0.00 3.85
6147 6476 8.807948 TTAAAATTATCTGCTTGCTTACTCCT 57.192 30.769 0.00 0.00 0.00 3.69
6148 6477 6.690194 AAATTATCTGCTTGCTTACTCCTG 57.310 37.500 0.00 0.00 0.00 3.86
6149 6478 5.620738 ATTATCTGCTTGCTTACTCCTGA 57.379 39.130 0.00 0.00 0.00 3.86
6150 6479 2.751166 TCTGCTTGCTTACTCCTGAC 57.249 50.000 0.00 0.00 0.00 3.51
6151 6480 1.970640 TCTGCTTGCTTACTCCTGACA 59.029 47.619 0.00 0.00 0.00 3.58
6152 6481 2.368548 TCTGCTTGCTTACTCCTGACAA 59.631 45.455 0.00 0.00 0.00 3.18
6153 6482 2.740981 CTGCTTGCTTACTCCTGACAAG 59.259 50.000 0.00 0.00 40.49 3.16
6154 6483 2.104792 TGCTTGCTTACTCCTGACAAGT 59.895 45.455 0.00 0.00 39.86 3.16
6155 6484 2.481952 GCTTGCTTACTCCTGACAAGTG 59.518 50.000 0.00 0.00 39.86 3.16
6156 6485 3.733337 CTTGCTTACTCCTGACAAGTGT 58.267 45.455 0.00 0.00 34.43 3.55
6157 6486 3.111853 TGCTTACTCCTGACAAGTGTG 57.888 47.619 0.00 0.00 0.00 3.82
6158 6487 2.224281 TGCTTACTCCTGACAAGTGTGG 60.224 50.000 0.00 0.00 0.00 4.17
6159 6488 2.417719 CTTACTCCTGACAAGTGTGGC 58.582 52.381 0.00 0.00 0.00 5.01
6160 6489 0.685097 TACTCCTGACAAGTGTGGCC 59.315 55.000 0.00 0.00 0.00 5.36
6161 6490 1.302832 CTCCTGACAAGTGTGGCCC 60.303 63.158 0.00 0.00 0.00 5.80
6162 6491 2.055689 CTCCTGACAAGTGTGGCCCA 62.056 60.000 0.00 0.00 0.00 5.36
6163 6492 1.898574 CCTGACAAGTGTGGCCCAC 60.899 63.158 7.01 7.01 44.89 4.61
6174 6503 2.723124 GTGGCCCACACTTAACATTG 57.277 50.000 9.55 0.00 46.72 2.82
6175 6504 1.960689 GTGGCCCACACTTAACATTGT 59.039 47.619 9.55 0.00 46.72 2.71
6176 6505 1.959985 TGGCCCACACTTAACATTGTG 59.040 47.619 0.00 0.00 42.40 3.33
6184 6513 6.668541 CACACTTAACATTGTGGGATAGAG 57.331 41.667 0.00 0.00 39.75 2.43
6185 6514 6.406370 CACACTTAACATTGTGGGATAGAGA 58.594 40.000 0.00 0.00 39.75 3.10
6186 6515 6.878923 CACACTTAACATTGTGGGATAGAGAA 59.121 38.462 0.00 0.00 39.75 2.87
6187 6516 7.390440 CACACTTAACATTGTGGGATAGAGAAA 59.610 37.037 0.00 0.00 39.75 2.52
6188 6517 7.942341 ACACTTAACATTGTGGGATAGAGAAAA 59.058 33.333 0.00 0.00 38.39 2.29
6189 6518 8.792633 CACTTAACATTGTGGGATAGAGAAAAA 58.207 33.333 0.00 0.00 0.00 1.94
6190 6519 8.793592 ACTTAACATTGTGGGATAGAGAAAAAC 58.206 33.333 0.00 0.00 0.00 2.43
6191 6520 8.698973 TTAACATTGTGGGATAGAGAAAAACA 57.301 30.769 0.00 0.00 0.00 2.83
6192 6521 7.781324 AACATTGTGGGATAGAGAAAAACAT 57.219 32.000 0.00 0.00 0.00 2.71
6193 6522 7.161773 ACATTGTGGGATAGAGAAAAACATG 57.838 36.000 0.00 0.00 0.00 3.21
6194 6523 6.721208 ACATTGTGGGATAGAGAAAAACATGT 59.279 34.615 0.00 0.00 0.00 3.21
6195 6524 6.573664 TTGTGGGATAGAGAAAAACATGTG 57.426 37.500 0.00 0.00 0.00 3.21
6196 6525 5.009631 TGTGGGATAGAGAAAAACATGTGG 58.990 41.667 0.00 0.00 0.00 4.17
6197 6526 4.399303 GTGGGATAGAGAAAAACATGTGGG 59.601 45.833 0.00 0.00 0.00 4.61
6198 6527 3.954258 GGGATAGAGAAAAACATGTGGGG 59.046 47.826 0.00 0.00 0.00 4.96
6199 6528 3.381590 GGATAGAGAAAAACATGTGGGGC 59.618 47.826 0.00 0.00 0.00 5.80
6200 6529 2.683211 AGAGAAAAACATGTGGGGCT 57.317 45.000 0.00 0.00 0.00 5.19
6201 6530 3.806949 AGAGAAAAACATGTGGGGCTA 57.193 42.857 0.00 0.00 0.00 3.93
6202 6531 3.690460 AGAGAAAAACATGTGGGGCTAG 58.310 45.455 0.00 0.00 0.00 3.42
6203 6532 2.755103 GAGAAAAACATGTGGGGCTAGG 59.245 50.000 0.00 0.00 0.00 3.02
6204 6533 2.110011 AGAAAAACATGTGGGGCTAGGT 59.890 45.455 0.00 0.00 0.00 3.08
6205 6534 1.923356 AAAACATGTGGGGCTAGGTG 58.077 50.000 0.00 0.00 0.00 4.00
6206 6535 0.777446 AAACATGTGGGGCTAGGTGT 59.223 50.000 0.00 0.00 0.00 4.16
6207 6536 1.663911 AACATGTGGGGCTAGGTGTA 58.336 50.000 0.00 0.00 0.00 2.90
6208 6537 1.893315 ACATGTGGGGCTAGGTGTAT 58.107 50.000 0.00 0.00 0.00 2.29
6209 6538 2.205342 ACATGTGGGGCTAGGTGTATT 58.795 47.619 0.00 0.00 0.00 1.89
6210 6539 2.580783 ACATGTGGGGCTAGGTGTATTT 59.419 45.455 0.00 0.00 0.00 1.40
6211 6540 3.011257 ACATGTGGGGCTAGGTGTATTTT 59.989 43.478 0.00 0.00 0.00 1.82
6212 6541 3.080300 TGTGGGGCTAGGTGTATTTTG 57.920 47.619 0.00 0.00 0.00 2.44
6213 6542 2.291282 TGTGGGGCTAGGTGTATTTTGG 60.291 50.000 0.00 0.00 0.00 3.28
6214 6543 1.997040 TGGGGCTAGGTGTATTTTGGT 59.003 47.619 0.00 0.00 0.00 3.67
6215 6544 2.025699 TGGGGCTAGGTGTATTTTGGTC 60.026 50.000 0.00 0.00 0.00 4.02
6216 6545 2.025699 GGGGCTAGGTGTATTTTGGTCA 60.026 50.000 0.00 0.00 0.00 4.02
6217 6546 3.372675 GGGGCTAGGTGTATTTTGGTCAT 60.373 47.826 0.00 0.00 0.00 3.06
6218 6547 4.141344 GGGGCTAGGTGTATTTTGGTCATA 60.141 45.833 0.00 0.00 0.00 2.15
6219 6548 5.457633 GGGGCTAGGTGTATTTTGGTCATAT 60.458 44.000 0.00 0.00 0.00 1.78
6220 6549 6.240060 GGGGCTAGGTGTATTTTGGTCATATA 60.240 42.308 0.00 0.00 0.00 0.86
6221 6550 7.228590 GGGCTAGGTGTATTTTGGTCATATAA 58.771 38.462 0.00 0.00 0.00 0.98
6222 6551 7.174426 GGGCTAGGTGTATTTTGGTCATATAAC 59.826 40.741 0.00 0.00 0.00 1.89
6223 6552 7.717875 GGCTAGGTGTATTTTGGTCATATAACA 59.282 37.037 0.00 0.00 0.00 2.41
6224 6553 9.284968 GCTAGGTGTATTTTGGTCATATAACAT 57.715 33.333 0.00 0.00 0.00 2.71
6226 6555 8.463930 AGGTGTATTTTGGTCATATAACATGG 57.536 34.615 0.00 0.00 0.00 3.66
6227 6556 8.058847 AGGTGTATTTTGGTCATATAACATGGT 58.941 33.333 0.00 0.00 0.00 3.55
6228 6557 8.349983 GGTGTATTTTGGTCATATAACATGGTC 58.650 37.037 0.00 0.00 0.00 4.02
6229 6558 8.898761 GTGTATTTTGGTCATATAACATGGTCA 58.101 33.333 0.00 0.00 0.00 4.02
6230 6559 9.467796 TGTATTTTGGTCATATAACATGGTCAA 57.532 29.630 0.00 0.00 0.00 3.18
6231 6560 9.730420 GTATTTTGGTCATATAACATGGTCAAC 57.270 33.333 0.00 0.00 0.00 3.18
6232 6561 6.429791 TTTGGTCATATAACATGGTCAACG 57.570 37.500 0.00 0.00 0.00 4.10
6233 6562 4.447290 TGGTCATATAACATGGTCAACGG 58.553 43.478 0.00 0.00 0.00 4.44
6234 6563 3.813166 GGTCATATAACATGGTCAACGGG 59.187 47.826 0.00 0.00 0.00 5.28
6235 6564 4.448210 GTCATATAACATGGTCAACGGGT 58.552 43.478 0.00 0.00 0.00 5.28
6236 6565 4.879545 GTCATATAACATGGTCAACGGGTT 59.120 41.667 0.00 0.00 0.00 4.11
6237 6566 5.355910 GTCATATAACATGGTCAACGGGTTT 59.644 40.000 0.00 0.00 0.00 3.27
6238 6567 5.587043 TCATATAACATGGTCAACGGGTTTC 59.413 40.000 0.00 0.00 0.00 2.78
6239 6568 2.060050 AACATGGTCAACGGGTTTCA 57.940 45.000 0.00 0.00 0.00 2.69
6240 6569 1.314730 ACATGGTCAACGGGTTTCAC 58.685 50.000 0.00 0.00 0.00 3.18
6241 6570 0.596082 CATGGTCAACGGGTTTCACC 59.404 55.000 3.46 3.46 37.60 4.02
6252 6581 1.142474 GGTTTCACCCGACAGTAACG 58.858 55.000 0.00 0.00 30.04 3.18
6260 6589 2.995466 CCGACAGTAACGGTGTCTAA 57.005 50.000 0.00 0.00 44.57 2.10
6261 6590 3.498927 CCGACAGTAACGGTGTCTAAT 57.501 47.619 0.00 0.00 44.57 1.73
6262 6591 3.176708 CCGACAGTAACGGTGTCTAATG 58.823 50.000 0.00 0.00 44.57 1.90
6263 6592 3.119743 CCGACAGTAACGGTGTCTAATGA 60.120 47.826 0.00 0.00 44.57 2.57
6264 6593 3.850273 CGACAGTAACGGTGTCTAATGAC 59.150 47.826 2.06 0.00 41.91 3.06
6265 6594 7.551957 CCGACAGTAACGGTGTCTAATGACA 62.552 48.000 0.00 0.00 44.48 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.584638 ACTGGGTGCAATGGAAGTATAA 57.415 40.909 0.00 0.00 0.00 0.98
210 211 2.851195 ACACAGATGTCACTTTGGACC 58.149 47.619 0.00 0.00 36.97 4.46
259 260 0.108329 AACATTCGTCAGTAGGCCGG 60.108 55.000 0.00 0.00 0.00 6.13
294 298 1.588082 GTGGACCAAATGCAGCCTG 59.412 57.895 0.00 0.00 0.00 4.85
321 325 1.970114 CCAGTGTCCCTTGCAGCAG 60.970 63.158 0.00 0.00 0.00 4.24
374 378 1.374758 CACTGTCGAGCACCCTTCC 60.375 63.158 0.00 0.00 0.00 3.46
389 393 1.913762 CACGGACCCCCTTCTCACT 60.914 63.158 0.00 0.00 0.00 3.41
428 432 0.179936 CCAGGCTGATCAGGAACTCC 59.820 60.000 23.89 15.42 34.60 3.85
446 450 4.436998 CACTCCTCGTGGTCCGCC 62.437 72.222 2.99 0.00 40.02 6.13
611 615 4.135493 GCGGTCGCGTTGCTTCTC 62.135 66.667 5.77 0.00 0.00 2.87
626 630 4.914420 CGGCGAGCTCAGTAGGCG 62.914 72.222 17.93 17.93 45.35 5.52
659 663 6.927936 TGACATCTCAAGTGAAAGAAGAAGAG 59.072 38.462 0.00 0.00 0.00 2.85
660 664 6.820335 TGACATCTCAAGTGAAAGAAGAAGA 58.180 36.000 0.00 0.00 0.00 2.87
661 665 7.488187 TTGACATCTCAAGTGAAAGAAGAAG 57.512 36.000 0.00 0.00 32.33 2.85
716 736 9.290988 ACCTCCTCTATTTTTCTTTCTTTCTTC 57.709 33.333 0.00 0.00 0.00 2.87
728 748 7.091533 TCTCTTCCAAACCTCCTCTATTTTT 57.908 36.000 0.00 0.00 0.00 1.94
774 794 6.838382 TCCTCATCATTCATCATCAACAGAT 58.162 36.000 0.00 0.00 0.00 2.90
776 796 6.937436 TTCCTCATCATTCATCATCAACAG 57.063 37.500 0.00 0.00 0.00 3.16
777 797 6.831868 ACATTCCTCATCATTCATCATCAACA 59.168 34.615 0.00 0.00 0.00 3.33
778 798 7.273320 ACATTCCTCATCATTCATCATCAAC 57.727 36.000 0.00 0.00 0.00 3.18
779 799 7.891498 AACATTCCTCATCATTCATCATCAA 57.109 32.000 0.00 0.00 0.00 2.57
780 800 7.891498 AAACATTCCTCATCATTCATCATCA 57.109 32.000 0.00 0.00 0.00 3.07
847 987 1.308998 CGTCTCAGTTTTGGTGCCTT 58.691 50.000 0.00 0.00 0.00 4.35
892 1032 0.913205 GACTTCCCCTTTCTCCCCTC 59.087 60.000 0.00 0.00 0.00 4.30
893 1033 0.910088 CGACTTCCCCTTTCTCCCCT 60.910 60.000 0.00 0.00 0.00 4.79
894 1034 1.602771 CGACTTCCCCTTTCTCCCC 59.397 63.158 0.00 0.00 0.00 4.81
895 1035 1.078356 GCGACTTCCCCTTTCTCCC 60.078 63.158 0.00 0.00 0.00 4.30
896 1036 1.078356 GGCGACTTCCCCTTTCTCC 60.078 63.158 0.00 0.00 0.00 3.71
927 1078 1.142748 CTACTCTTGGCTGCCTCCG 59.857 63.158 21.03 8.10 0.00 4.63
934 1088 0.526662 CCGTTCGTCTACTCTTGGCT 59.473 55.000 0.00 0.00 0.00 4.75
1102 1263 3.844090 GAGGTGGAGGAGGAGCGC 61.844 72.222 0.00 0.00 0.00 5.92
1110 1271 1.500783 ATTGGTGGTGGAGGTGGAGG 61.501 60.000 0.00 0.00 0.00 4.30
1860 2021 3.371063 GTCCTGAGGTCGGCGACA 61.371 66.667 37.13 19.20 33.68 4.35
1912 2073 6.315144 TGTCGTGGATTAATAGTGTGGATTTG 59.685 38.462 0.00 0.00 0.00 2.32
1915 2076 5.607939 TGTCGTGGATTAATAGTGTGGAT 57.392 39.130 0.00 0.00 0.00 3.41
1916 2077 5.607939 ATGTCGTGGATTAATAGTGTGGA 57.392 39.130 0.00 0.00 0.00 4.02
1918 2079 5.746721 TCGAATGTCGTGGATTAATAGTGTG 59.253 40.000 0.00 0.00 41.35 3.82
1919 2080 5.747197 GTCGAATGTCGTGGATTAATAGTGT 59.253 40.000 0.00 0.00 41.35 3.55
1921 2082 5.898174 TGTCGAATGTCGTGGATTAATAGT 58.102 37.500 0.00 0.00 41.35 2.12
1922 2083 6.640907 TGATGTCGAATGTCGTGGATTAATAG 59.359 38.462 0.00 0.00 41.35 1.73
1923 2084 6.508777 TGATGTCGAATGTCGTGGATTAATA 58.491 36.000 0.00 0.00 41.35 0.98
1925 2086 4.749976 TGATGTCGAATGTCGTGGATTAA 58.250 39.130 0.00 0.00 41.35 1.40
1926 2087 4.379339 TGATGTCGAATGTCGTGGATTA 57.621 40.909 0.00 0.00 41.35 1.75
1927 2088 3.245518 TGATGTCGAATGTCGTGGATT 57.754 42.857 0.00 0.00 41.35 3.01
1928 2089 2.959507 TGATGTCGAATGTCGTGGAT 57.040 45.000 0.00 0.00 41.35 3.41
1929 2090 2.165437 TGATGATGTCGAATGTCGTGGA 59.835 45.455 0.00 0.00 41.35 4.02
1932 2093 8.763049 ATAATAATGATGATGTCGAATGTCGT 57.237 30.769 0.00 0.00 41.35 4.34
1936 2097 9.486857 GCAGAATAATAATGATGATGTCGAATG 57.513 33.333 0.00 0.00 0.00 2.67
1937 2098 9.445878 AGCAGAATAATAATGATGATGTCGAAT 57.554 29.630 0.00 0.00 0.00 3.34
1940 2101 7.961283 CCAAGCAGAATAATAATGATGATGTCG 59.039 37.037 0.00 0.00 0.00 4.35
1941 2102 8.790718 ACCAAGCAGAATAATAATGATGATGTC 58.209 33.333 0.00 0.00 0.00 3.06
1942 2103 8.573885 CACCAAGCAGAATAATAATGATGATGT 58.426 33.333 0.00 0.00 0.00 3.06
1943 2104 8.573885 ACACCAAGCAGAATAATAATGATGATG 58.426 33.333 0.00 0.00 0.00 3.07
1944 2105 8.573885 CACACCAAGCAGAATAATAATGATGAT 58.426 33.333 0.00 0.00 0.00 2.45
1946 2107 7.143340 CCACACCAAGCAGAATAATAATGATG 58.857 38.462 0.00 0.00 0.00 3.07
1947 2108 6.239120 GCCACACCAAGCAGAATAATAATGAT 60.239 38.462 0.00 0.00 0.00 2.45
1950 2111 4.955450 TGCCACACCAAGCAGAATAATAAT 59.045 37.500 0.00 0.00 33.08 1.28
1951 2112 4.339748 TGCCACACCAAGCAGAATAATAA 58.660 39.130 0.00 0.00 33.08 1.40
1957 2118 0.682532 TGTTGCCACACCAAGCAGAA 60.683 50.000 0.00 0.00 40.73 3.02
2012 2173 7.663081 CCTAGCCATCATCTAAAGAGCATAAAA 59.337 37.037 0.00 0.00 0.00 1.52
2146 2307 4.226761 CAATCTGGTAAACACGCCTTTTC 58.773 43.478 0.00 0.00 0.00 2.29
2273 2434 8.517878 ACATGAATGGAAAACAAGAGACTAATG 58.482 33.333 0.00 0.00 0.00 1.90
2281 2442 6.998074 ACAGAGTACATGAATGGAAAACAAGA 59.002 34.615 0.00 0.00 0.00 3.02
2389 2550 3.603532 CTCTGCATTTACCTTCTGAGCA 58.396 45.455 0.00 0.00 0.00 4.26
2420 2581 4.351127 TCCTCCAAAACCTCCTCTAGTAC 58.649 47.826 0.00 0.00 0.00 2.73
2425 2586 1.352687 GCTTCCTCCAAAACCTCCTCT 59.647 52.381 0.00 0.00 0.00 3.69
2482 2643 3.630312 TGGAAGAAAACGGAGAAACAAGG 59.370 43.478 0.00 0.00 0.00 3.61
2493 2654 1.334869 AGTGCTGCTTGGAAGAAAACG 59.665 47.619 0.00 0.00 0.00 3.60
2635 2882 8.682710 TGTAGGATATCAGGTAAAAACATTTGC 58.317 33.333 4.83 0.00 0.00 3.68
2727 2974 7.977293 TGCCACATTCATTATTTTCATCTTCAG 59.023 33.333 0.00 0.00 0.00 3.02
2838 3085 2.407090 TCTGACTGCATTGAAGACACG 58.593 47.619 0.00 0.00 0.00 4.49
2846 3093 7.172703 TGCTATTAGATTGATCTGACTGCATTG 59.827 37.037 3.79 0.00 37.76 2.82
2873 3120 8.707938 AGGCAATGAAAATTAAATAGCAACTC 57.292 30.769 0.00 0.00 0.00 3.01
2955 3202 6.857964 CACATGGTTAAGCTGACAAGTTTTAG 59.142 38.462 6.19 0.00 0.00 1.85
2956 3203 6.544197 TCACATGGTTAAGCTGACAAGTTTTA 59.456 34.615 6.19 0.00 0.00 1.52
2957 3204 5.359576 TCACATGGTTAAGCTGACAAGTTTT 59.640 36.000 6.19 0.00 0.00 2.43
2969 3216 6.432783 TGTTATGAAGGGTTCACATGGTTAAG 59.567 38.462 0.00 0.00 43.48 1.85
3005 3252 5.998981 TCCTCTCGCATAACCTTGTTAAAAA 59.001 36.000 0.00 0.00 0.00 1.94
3027 3274 1.903183 AGCAAGTACTTCTCCCACTCC 59.097 52.381 4.77 0.00 0.00 3.85
3138 3385 5.860941 TCTCATTCTCATTAGACCCTGTC 57.139 43.478 0.00 0.00 0.00 3.51
3277 3530 4.141251 TCCCTTTACAGAACCTTTCTTGCT 60.141 41.667 0.00 0.00 38.11 3.91
3309 3562 2.143231 TCTTTGGTACCCCCTTTCCT 57.857 50.000 10.07 0.00 0.00 3.36
3310 3563 2.984435 TTCTTTGGTACCCCCTTTCC 57.016 50.000 10.07 0.00 0.00 3.13
3311 3564 3.322828 GGTTTTCTTTGGTACCCCCTTTC 59.677 47.826 10.07 0.00 0.00 2.62
3312 3565 3.311091 GGTTTTCTTTGGTACCCCCTTT 58.689 45.455 10.07 0.00 0.00 3.11
3313 3566 2.426708 GGGTTTTCTTTGGTACCCCCTT 60.427 50.000 10.07 0.00 43.65 3.95
3314 3567 1.148446 GGGTTTTCTTTGGTACCCCCT 59.852 52.381 10.07 0.00 43.65 4.79
3315 3568 1.636148 GGGTTTTCTTTGGTACCCCC 58.364 55.000 10.07 6.13 43.65 5.40
3321 3574 4.349365 TCTTTGTCAGGGTTTTCTTTGGT 58.651 39.130 0.00 0.00 0.00 3.67
3391 3644 3.600388 CTTCCACATCAGTACCTTGACC 58.400 50.000 0.00 0.00 0.00 4.02
3393 3646 2.637382 TGCTTCCACATCAGTACCTTGA 59.363 45.455 0.00 0.00 0.00 3.02
3464 3717 0.972471 TGGAGCAGGAGCATCTTCGA 60.972 55.000 0.00 0.00 45.49 3.71
3493 3746 4.530094 TCAAGTCGTCAACATTGTCAAC 57.470 40.909 0.00 0.00 0.00 3.18
3494 3747 5.295540 TCAATCAAGTCGTCAACATTGTCAA 59.704 36.000 0.00 0.00 0.00 3.18
3507 3760 3.305094 GCATTTTGGCATCAATCAAGTCG 59.695 43.478 0.00 0.00 32.28 4.18
3531 3784 1.135286 GCATAAAACTGCACAGGAGGC 60.135 52.381 2.21 0.00 41.87 4.70
3801 4054 1.140852 CTGAAACACCACCTGACCTGA 59.859 52.381 0.00 0.00 0.00 3.86
3802 4055 1.134098 ACTGAAACACCACCTGACCTG 60.134 52.381 0.00 0.00 0.00 4.00
3803 4056 1.213296 ACTGAAACACCACCTGACCT 58.787 50.000 0.00 0.00 0.00 3.85
3804 4057 1.676006 CAACTGAAACACCACCTGACC 59.324 52.381 0.00 0.00 0.00 4.02
3805 4058 2.639065 TCAACTGAAACACCACCTGAC 58.361 47.619 0.00 0.00 0.00 3.51
3844 4097 6.879458 CAGAAGTTGCTACTAGGGTACATTTT 59.121 38.462 0.00 0.00 33.17 1.82
3846 4099 5.978814 CAGAAGTTGCTACTAGGGTACATT 58.021 41.667 0.00 0.00 33.17 2.71
3847 4100 5.599999 CAGAAGTTGCTACTAGGGTACAT 57.400 43.478 0.00 0.00 33.17 2.29
3861 4115 1.541588 GGTAAGGCCAAGCAGAAGTTG 59.458 52.381 5.01 0.00 37.17 3.16
3880 4134 4.160065 TCATTCACATGGTAAATGCTTGGG 59.840 41.667 0.00 0.00 31.84 4.12
4008 4283 5.417894 ACAGACGTATCATGTACCAGAAGAA 59.582 40.000 0.00 0.00 0.00 2.52
4024 4302 7.390996 ACTCTGAAGAGAAATAAGACAGACGTA 59.609 37.037 14.20 0.00 44.74 3.57
4202 4480 3.271729 TCAGCCAGTAAAAACACGACAA 58.728 40.909 0.00 0.00 0.00 3.18
4232 4510 5.129634 TGGAAGAATACAGTGCTCAACAAA 58.870 37.500 0.00 0.00 0.00 2.83
4238 4516 3.618690 ACCTGGAAGAATACAGTGCTC 57.381 47.619 0.00 0.00 34.07 4.26
4325 4603 1.007479 ACTTCCAGGGTCACCGGTATA 59.993 52.381 6.87 0.00 43.47 1.47
4472 4750 4.335874 TGCGAGAACTCTATCAGAAGTACC 59.664 45.833 0.00 0.00 0.00 3.34
4475 4753 4.702612 TCTTGCGAGAACTCTATCAGAAGT 59.297 41.667 0.00 0.00 0.00 3.01
4539 4817 9.429109 TCCTTGTGTAAAGACCATCTGTATATA 57.571 33.333 0.00 0.00 0.00 0.86
4555 4833 4.081862 CCGAATAGGACAGTCCTTGTGTAA 60.082 45.833 27.73 8.76 46.91 2.41
4556 4834 3.446161 CCGAATAGGACAGTCCTTGTGTA 59.554 47.826 27.73 9.55 46.91 2.90
4560 4838 4.621991 CATACCGAATAGGACAGTCCTTG 58.378 47.826 27.73 12.90 46.91 3.61
4565 4843 1.269621 GCGCATACCGAATAGGACAGT 60.270 52.381 0.30 0.00 45.00 3.55
4566 4844 1.269569 TGCGCATACCGAATAGGACAG 60.270 52.381 5.66 0.00 45.00 3.51
4578 4856 5.853282 GGAATGAACTATGATTTGCGCATAC 59.147 40.000 12.75 6.48 0.00 2.39
4579 4857 5.048782 GGGAATGAACTATGATTTGCGCATA 60.049 40.000 12.75 7.07 0.00 3.14
4580 4858 4.261741 GGGAATGAACTATGATTTGCGCAT 60.262 41.667 12.75 0.00 0.00 4.73
4581 4859 3.066621 GGGAATGAACTATGATTTGCGCA 59.933 43.478 5.66 5.66 0.00 6.09
4582 4860 3.066621 TGGGAATGAACTATGATTTGCGC 59.933 43.478 0.00 0.00 0.00 6.09
4583 4861 4.898829 TGGGAATGAACTATGATTTGCG 57.101 40.909 0.00 0.00 0.00 4.85
4594 4872 4.040339 ACTTTGGTTTCCATGGGAATGAAC 59.960 41.667 9.22 7.84 41.71 3.18
4601 4879 1.895131 CTGGACTTTGGTTTCCATGGG 59.105 52.381 13.02 0.00 41.20 4.00
4608 4886 5.255397 TGGATGATACTGGACTTTGGTTT 57.745 39.130 0.00 0.00 0.00 3.27
4611 4889 5.195940 ACAATGGATGATACTGGACTTTGG 58.804 41.667 0.00 0.00 0.00 3.28
4642 4920 2.432510 AGTAGTAAGCAGACCATCAGGC 59.567 50.000 0.00 0.00 39.06 4.85
4694 4973 0.762418 ACACGTCATCCCCAACTTCA 59.238 50.000 0.00 0.00 0.00 3.02
4808 5087 6.415867 GGTTTGATTTCAGCGACATGAATATG 59.584 38.462 0.00 0.00 38.90 1.78
4892 5171 1.105167 ACCTCACGTCGTCTTCCACA 61.105 55.000 0.00 0.00 0.00 4.17
4921 5200 0.678684 TGCCACATCCAGATGCACAG 60.679 55.000 7.56 0.00 42.39 3.66
4926 5205 1.134367 CTGCTTTGCCACATCCAGATG 59.866 52.381 6.09 6.09 44.15 2.90
4966 5248 6.730960 TTTATATATAAAGCGGGGCGAAAG 57.269 37.500 12.90 0.00 0.00 2.62
4967 5249 6.730960 CTTTATATATAAAGCGGGGCGAAA 57.269 37.500 25.10 1.66 41.69 3.46
4981 5263 9.469097 TTGTAAGTTGGTTGTGGCTTTATATAT 57.531 29.630 0.00 0.00 0.00 0.86
4982 5264 8.732531 GTTGTAAGTTGGTTGTGGCTTTATATA 58.267 33.333 0.00 0.00 0.00 0.86
4983 5265 7.574217 CGTTGTAAGTTGGTTGTGGCTTTATAT 60.574 37.037 0.00 0.00 0.00 0.86
4984 5266 6.293516 CGTTGTAAGTTGGTTGTGGCTTTATA 60.294 38.462 0.00 0.00 0.00 0.98
4985 5267 5.506649 CGTTGTAAGTTGGTTGTGGCTTTAT 60.507 40.000 0.00 0.00 0.00 1.40
4986 5268 4.201930 CGTTGTAAGTTGGTTGTGGCTTTA 60.202 41.667 0.00 0.00 0.00 1.85
4987 5269 3.428316 CGTTGTAAGTTGGTTGTGGCTTT 60.428 43.478 0.00 0.00 0.00 3.51
4988 5270 2.098443 CGTTGTAAGTTGGTTGTGGCTT 59.902 45.455 0.00 0.00 0.00 4.35
4989 5271 1.673920 CGTTGTAAGTTGGTTGTGGCT 59.326 47.619 0.00 0.00 0.00 4.75
4990 5272 1.671845 TCGTTGTAAGTTGGTTGTGGC 59.328 47.619 0.00 0.00 0.00 5.01
4991 5273 3.199677 TCTCGTTGTAAGTTGGTTGTGG 58.800 45.455 0.00 0.00 0.00 4.17
4992 5274 4.868450 TTCTCGTTGTAAGTTGGTTGTG 57.132 40.909 0.00 0.00 0.00 3.33
4993 5275 5.587043 TCATTTCTCGTTGTAAGTTGGTTGT 59.413 36.000 0.00 0.00 0.00 3.32
4994 5276 6.055231 TCATTTCTCGTTGTAAGTTGGTTG 57.945 37.500 0.00 0.00 0.00 3.77
4995 5277 6.877611 ATCATTTCTCGTTGTAAGTTGGTT 57.122 33.333 0.00 0.00 0.00 3.67
4996 5278 7.606456 ACATATCATTTCTCGTTGTAAGTTGGT 59.394 33.333 0.00 0.00 0.00 3.67
4997 5279 7.974675 ACATATCATTTCTCGTTGTAAGTTGG 58.025 34.615 0.00 0.00 0.00 3.77
5002 5284 9.607988 ACCATAACATATCATTTCTCGTTGTAA 57.392 29.630 0.00 0.00 0.00 2.41
5003 5285 9.607988 AACCATAACATATCATTTCTCGTTGTA 57.392 29.630 0.00 0.00 0.00 2.41
5004 5286 8.506168 AACCATAACATATCATTTCTCGTTGT 57.494 30.769 0.00 0.00 0.00 3.32
5007 5289 8.761497 CGTTAACCATAACATATCATTTCTCGT 58.239 33.333 0.00 0.00 41.24 4.18
5008 5290 8.221100 CCGTTAACCATAACATATCATTTCTCG 58.779 37.037 0.00 0.00 41.24 4.04
5009 5291 9.052759 ACCGTTAACCATAACATATCATTTCTC 57.947 33.333 0.00 0.00 41.24 2.87
5010 5292 8.974060 ACCGTTAACCATAACATATCATTTCT 57.026 30.769 0.00 0.00 41.24 2.52
5043 5325 2.741486 TTCTCGGCCCTGAAAACCCG 62.741 60.000 0.00 0.00 41.97 5.28
5093 5375 4.459089 GTCACGCCAGGGAGCCTC 62.459 72.222 0.00 0.00 0.00 4.70
5176 5458 4.527583 GCTCCGCCAGCCTCTCTG 62.528 72.222 0.00 0.00 43.17 3.35
5240 5522 0.108186 TCATGCTGGGACACTTAGCG 60.108 55.000 0.00 0.00 40.24 4.26
5243 5525 2.101415 CGAGATCATGCTGGGACACTTA 59.899 50.000 0.00 0.00 0.00 2.24
5270 5552 4.180057 CAGACCAGTAGAGTTTGATGCTC 58.820 47.826 0.00 0.00 0.00 4.26
5321 5603 3.562141 CGAACACCCATAGTTCACAACAA 59.438 43.478 6.83 0.00 44.22 2.83
5322 5604 3.135225 CGAACACCCATAGTTCACAACA 58.865 45.455 6.83 0.00 44.22 3.33
5323 5605 2.482721 CCGAACACCCATAGTTCACAAC 59.517 50.000 6.83 0.00 44.22 3.32
5343 5625 1.950828 TCCTGACGAGTACGATCTCC 58.049 55.000 0.00 0.00 42.66 3.71
5349 5631 3.681855 CACTACAATCCTGACGAGTACG 58.318 50.000 0.00 0.00 45.75 3.67
5358 5640 4.881019 ATAGCCTAGCACTACAATCCTG 57.119 45.455 0.00 0.00 0.00 3.86
5362 5644 5.373812 ACCAAATAGCCTAGCACTACAAT 57.626 39.130 0.00 0.00 0.00 2.71
5363 5645 4.837093 ACCAAATAGCCTAGCACTACAA 57.163 40.909 0.00 0.00 0.00 2.41
5364 5646 4.960469 ACTACCAAATAGCCTAGCACTACA 59.040 41.667 0.00 0.00 33.73 2.74
5369 5651 5.163343 CCTTACACTACCAAATAGCCTAGCA 60.163 44.000 0.00 0.00 33.73 3.49
5376 5658 6.407074 CCAGTCCTCCTTACACTACCAAATAG 60.407 46.154 0.00 0.00 36.89 1.73
5392 5674 0.329596 AATTGCCAGTCCAGTCCTCC 59.670 55.000 0.00 0.00 0.00 4.30
5395 5677 0.967380 CCCAATTGCCAGTCCAGTCC 60.967 60.000 0.00 0.00 0.00 3.85
5398 5680 2.214376 TTACCCAATTGCCAGTCCAG 57.786 50.000 0.00 0.00 0.00 3.86
5399 5681 2.830923 CAATTACCCAATTGCCAGTCCA 59.169 45.455 0.00 0.00 43.30 4.02
5447 5744 6.485984 CAGCTTTCCTAAGAGCAATCACATAT 59.514 38.462 0.00 0.00 41.31 1.78
5448 5745 5.819379 CAGCTTTCCTAAGAGCAATCACATA 59.181 40.000 0.00 0.00 41.31 2.29
5493 5790 3.347216 TCTAACCTGCTCAAGCCAAATC 58.653 45.455 0.00 0.00 41.18 2.17
5529 5826 7.120285 TGAGAGATCAAGATCATTTTGTTCCAC 59.880 37.037 12.21 0.00 40.22 4.02
5546 5843 7.952671 AGTACAGTACAAGTTTTGAGAGATCA 58.047 34.615 13.37 0.00 0.00 2.92
5588 5885 8.819015 CAAAACATTCTTGATCATTTGTGTTCA 58.181 29.630 13.80 0.00 0.00 3.18
5644 5962 5.592104 AACAAGAAATCCCAACTCGTTTT 57.408 34.783 0.00 0.00 0.00 2.43
5647 5965 4.070009 GGTAACAAGAAATCCCAACTCGT 58.930 43.478 0.00 0.00 0.00 4.18
5648 5966 4.324267 AGGTAACAAGAAATCCCAACTCG 58.676 43.478 0.00 0.00 41.41 4.18
5649 5967 6.264518 TGAAAGGTAACAAGAAATCCCAACTC 59.735 38.462 0.00 0.00 41.41 3.01
5650 5968 6.133356 TGAAAGGTAACAAGAAATCCCAACT 58.867 36.000 0.00 0.00 41.41 3.16
5651 5969 6.399639 TGAAAGGTAACAAGAAATCCCAAC 57.600 37.500 0.00 0.00 41.41 3.77
5812 6139 3.810941 TCATGAACGGCGAAGTAGTTTTT 59.189 39.130 16.62 0.00 30.68 1.94
5814 6141 3.034721 TCATGAACGGCGAAGTAGTTT 57.965 42.857 16.62 0.00 30.68 2.66
5817 6144 4.600012 ATTTTCATGAACGGCGAAGTAG 57.400 40.909 16.62 0.00 0.00 2.57
5818 6145 7.439955 ACATATATTTTCATGAACGGCGAAGTA 59.560 33.333 16.62 0.00 0.00 2.24
5824 6153 9.051027 CGAAATACATATATTTTCATGAACGGC 57.949 33.333 7.89 0.00 40.42 5.68
5851 6180 9.480053 CCATTTCATTTATTGAACTTTGTCTGT 57.520 29.630 0.00 0.00 43.99 3.41
5852 6181 9.695526 TCCATTTCATTTATTGAACTTTGTCTG 57.304 29.630 0.00 0.00 43.99 3.51
5868 6197 6.093909 GCCCGATTTTGAATTTCCATTTCATT 59.906 34.615 0.00 0.00 33.37 2.57
5876 6205 5.878332 AATTTGCCCGATTTTGAATTTCC 57.122 34.783 0.00 0.00 0.00 3.13
5877 6206 6.085573 CCAAATTTGCCCGATTTTGAATTTC 58.914 36.000 12.92 0.00 0.00 2.17
5878 6207 5.534278 ACCAAATTTGCCCGATTTTGAATTT 59.466 32.000 12.92 0.00 0.00 1.82
5879 6208 5.069318 ACCAAATTTGCCCGATTTTGAATT 58.931 33.333 12.92 0.00 0.00 2.17
5880 6209 4.650734 ACCAAATTTGCCCGATTTTGAAT 58.349 34.783 12.92 0.00 0.00 2.57
5881 6210 4.078639 ACCAAATTTGCCCGATTTTGAA 57.921 36.364 12.92 0.00 0.00 2.69
5902 6231 7.869429 CCTAAGAAAAGGTTACAACGACTTCTA 59.131 37.037 0.00 0.00 31.46 2.10
5910 6239 5.314529 AGCTCCCTAAGAAAAGGTTACAAC 58.685 41.667 0.00 0.00 34.56 3.32
5922 6251 2.519771 TGTACCGAAGCTCCCTAAGA 57.480 50.000 0.00 0.00 0.00 2.10
5923 6252 2.959707 AGATGTACCGAAGCTCCCTAAG 59.040 50.000 0.00 0.00 0.00 2.18
5928 6257 4.023021 CCTTAGTAGATGTACCGAAGCTCC 60.023 50.000 0.00 0.00 0.00 4.70
5935 6264 7.040473 AGATTTCACCTTAGTAGATGTACCG 57.960 40.000 0.00 0.00 0.00 4.02
5965 6294 9.025041 CCCAAGTTCTTTCCTCTAAATACATTT 57.975 33.333 0.00 0.00 0.00 2.32
5966 6295 8.170730 ACCCAAGTTCTTTCCTCTAAATACATT 58.829 33.333 0.00 0.00 0.00 2.71
5968 6297 7.086685 ACCCAAGTTCTTTCCTCTAAATACA 57.913 36.000 0.00 0.00 0.00 2.29
5969 6298 7.997773 AACCCAAGTTCTTTCCTCTAAATAC 57.002 36.000 0.00 0.00 0.00 1.89
5972 6301 6.669631 AGAAACCCAAGTTCTTTCCTCTAAA 58.330 36.000 0.00 0.00 34.19 1.85
5973 6302 6.262056 AGAAACCCAAGTTCTTTCCTCTAA 57.738 37.500 0.00 0.00 34.19 2.10
5974 6303 5.221864 GGAGAAACCCAAGTTCTTTCCTCTA 60.222 44.000 0.00 0.00 34.19 2.43
5975 6304 4.446455 GGAGAAACCCAAGTTCTTTCCTCT 60.446 45.833 0.00 0.00 34.19 3.69
5978 6307 3.318275 GTGGAGAAACCCAAGTTCTTTCC 59.682 47.826 0.00 0.00 38.06 3.13
5979 6308 3.318275 GGTGGAGAAACCCAAGTTCTTTC 59.682 47.826 0.00 0.00 38.06 2.62
5980 6309 3.052869 AGGTGGAGAAACCCAAGTTCTTT 60.053 43.478 0.00 0.00 41.54 2.52
5981 6310 2.514160 AGGTGGAGAAACCCAAGTTCTT 59.486 45.455 0.00 0.00 41.54 2.52
5982 6311 2.106684 GAGGTGGAGAAACCCAAGTTCT 59.893 50.000 0.00 0.00 41.54 3.01
5983 6312 2.505405 GAGGTGGAGAAACCCAAGTTC 58.495 52.381 0.00 0.00 41.54 3.01
5984 6313 1.145119 GGAGGTGGAGAAACCCAAGTT 59.855 52.381 0.00 0.00 41.54 2.66
5985 6314 0.771755 GGAGGTGGAGAAACCCAAGT 59.228 55.000 0.00 0.00 41.54 3.16
5986 6315 0.038310 GGGAGGTGGAGAAACCCAAG 59.962 60.000 0.00 0.00 41.54 3.61
5987 6316 1.774894 CGGGAGGTGGAGAAACCCAA 61.775 60.000 0.00 0.00 41.54 4.12
5988 6317 2.221299 CGGGAGGTGGAGAAACCCA 61.221 63.158 0.00 0.00 41.54 4.51
5989 6318 2.669240 CGGGAGGTGGAGAAACCC 59.331 66.667 0.00 0.00 41.54 4.11
5990 6319 2.046217 GCGGGAGGTGGAGAAACC 60.046 66.667 0.00 0.00 40.85 3.27
5991 6320 2.046217 GGCGGGAGGTGGAGAAAC 60.046 66.667 0.00 0.00 0.00 2.78
5992 6321 3.702048 CGGCGGGAGGTGGAGAAA 61.702 66.667 0.00 0.00 0.00 2.52
6006 6335 4.500116 GAGACGAGGCAGACCGGC 62.500 72.222 0.00 0.00 42.76 6.13
6007 6336 3.827898 GGAGACGAGGCAGACCGG 61.828 72.222 0.00 0.00 42.76 5.28
6019 6348 1.674057 CCCTATGGCCATCGGAGAC 59.326 63.158 32.66 0.00 42.51 3.36
6020 6349 4.215370 CCCTATGGCCATCGGAGA 57.785 61.111 32.66 11.26 45.75 3.71
6030 6359 2.768344 ACCTCCACGGCCCTATGG 60.768 66.667 8.75 8.75 37.32 2.74
6031 6360 2.505982 CACCTCCACGGCCCTATG 59.494 66.667 0.00 0.00 35.61 2.23
6032 6361 3.480133 GCACCTCCACGGCCCTAT 61.480 66.667 0.00 0.00 35.61 2.57
6040 6369 4.699522 GGTCCACCGCACCTCCAC 62.700 72.222 0.00 0.00 0.00 4.02
6043 6372 4.394712 CAGGGTCCACCGCACCTC 62.395 72.222 0.00 0.00 46.96 3.85
6050 6379 4.366684 CAAGGGCCAGGGTCCACC 62.367 72.222 12.27 0.00 43.56 4.61
6061 6390 3.635268 CTCTCCCACAGGCAAGGGC 62.635 68.421 4.24 0.00 45.07 5.19
6062 6391 1.277580 ATCTCTCCCACAGGCAAGGG 61.278 60.000 2.81 2.81 46.90 3.95
6063 6392 0.179936 GATCTCTCCCACAGGCAAGG 59.820 60.000 0.00 0.00 0.00 3.61
6064 6393 1.202330 AGATCTCTCCCACAGGCAAG 58.798 55.000 0.00 0.00 0.00 4.01
6065 6394 1.280133 CAAGATCTCTCCCACAGGCAA 59.720 52.381 0.00 0.00 0.00 4.52
6066 6395 0.907486 CAAGATCTCTCCCACAGGCA 59.093 55.000 0.00 0.00 0.00 4.75
6067 6396 0.463474 GCAAGATCTCTCCCACAGGC 60.463 60.000 0.00 0.00 0.00 4.85
6068 6397 1.138661 GAGCAAGATCTCTCCCACAGG 59.861 57.143 0.00 0.00 0.00 4.00
6069 6398 1.138661 GGAGCAAGATCTCTCCCACAG 59.861 57.143 16.41 0.00 42.30 3.66
6070 6399 1.198713 GGAGCAAGATCTCTCCCACA 58.801 55.000 16.41 0.00 42.30 4.17
6071 6400 0.103937 CGGAGCAAGATCTCTCCCAC 59.896 60.000 19.80 1.95 44.61 4.61
6072 6401 0.324738 ACGGAGCAAGATCTCTCCCA 60.325 55.000 19.80 0.00 44.61 4.37
6073 6402 0.827368 AACGGAGCAAGATCTCTCCC 59.173 55.000 19.80 8.52 44.61 4.30
6074 6403 2.682155 AAACGGAGCAAGATCTCTCC 57.318 50.000 17.03 17.03 44.14 3.71
6094 6423 9.413048 GGAAATAATATCACGAAAACACCAAAA 57.587 29.630 0.00 0.00 0.00 2.44
6095 6424 8.798402 AGGAAATAATATCACGAAAACACCAAA 58.202 29.630 0.00 0.00 0.00 3.28
6096 6425 8.343168 AGGAAATAATATCACGAAAACACCAA 57.657 30.769 0.00 0.00 0.00 3.67
6097 6426 7.931578 AGGAAATAATATCACGAAAACACCA 57.068 32.000 0.00 0.00 0.00 4.17
6115 6444 9.948964 AAGCAAGCAGATAATTTTAAAGGAAAT 57.051 25.926 0.00 0.00 0.00 2.17
6117 6446 9.855021 GTAAGCAAGCAGATAATTTTAAAGGAA 57.145 29.630 0.00 0.00 0.00 3.36
6118 6447 9.243105 AGTAAGCAAGCAGATAATTTTAAAGGA 57.757 29.630 0.00 0.00 0.00 3.36
6119 6448 9.508567 GAGTAAGCAAGCAGATAATTTTAAAGG 57.491 33.333 0.00 0.00 0.00 3.11
6120 6449 9.508567 GGAGTAAGCAAGCAGATAATTTTAAAG 57.491 33.333 0.00 0.00 0.00 1.85
6121 6450 9.243105 AGGAGTAAGCAAGCAGATAATTTTAAA 57.757 29.630 0.00 0.00 0.00 1.52
6122 6451 8.677300 CAGGAGTAAGCAAGCAGATAATTTTAA 58.323 33.333 0.00 0.00 0.00 1.52
6123 6452 8.046708 TCAGGAGTAAGCAAGCAGATAATTTTA 58.953 33.333 0.00 0.00 0.00 1.52
6124 6453 6.886459 TCAGGAGTAAGCAAGCAGATAATTTT 59.114 34.615 0.00 0.00 0.00 1.82
6125 6454 6.317391 GTCAGGAGTAAGCAAGCAGATAATTT 59.683 38.462 0.00 0.00 0.00 1.82
6126 6455 5.819901 GTCAGGAGTAAGCAAGCAGATAATT 59.180 40.000 0.00 0.00 0.00 1.40
6127 6456 5.104776 TGTCAGGAGTAAGCAAGCAGATAAT 60.105 40.000 0.00 0.00 0.00 1.28
6128 6457 4.222810 TGTCAGGAGTAAGCAAGCAGATAA 59.777 41.667 0.00 0.00 0.00 1.75
6129 6458 3.769300 TGTCAGGAGTAAGCAAGCAGATA 59.231 43.478 0.00 0.00 0.00 1.98
6130 6459 2.568956 TGTCAGGAGTAAGCAAGCAGAT 59.431 45.455 0.00 0.00 0.00 2.90
6131 6460 1.970640 TGTCAGGAGTAAGCAAGCAGA 59.029 47.619 0.00 0.00 0.00 4.26
6132 6461 2.462456 TGTCAGGAGTAAGCAAGCAG 57.538 50.000 0.00 0.00 0.00 4.24
6133 6462 2.104792 ACTTGTCAGGAGTAAGCAAGCA 59.895 45.455 0.00 0.00 39.86 3.91
6134 6463 2.481952 CACTTGTCAGGAGTAAGCAAGC 59.518 50.000 0.00 0.00 39.86 4.01
6135 6464 3.496130 CACACTTGTCAGGAGTAAGCAAG 59.504 47.826 0.00 0.00 41.40 4.01
6136 6465 3.466836 CACACTTGTCAGGAGTAAGCAA 58.533 45.455 0.00 0.00 0.00 3.91
6137 6466 2.224281 CCACACTTGTCAGGAGTAAGCA 60.224 50.000 0.00 0.00 0.00 3.91
6138 6467 2.417719 CCACACTTGTCAGGAGTAAGC 58.582 52.381 0.00 0.00 0.00 3.09
6139 6468 2.417719 GCCACACTTGTCAGGAGTAAG 58.582 52.381 0.00 0.00 0.00 2.34
6140 6469 1.071699 GGCCACACTTGTCAGGAGTAA 59.928 52.381 0.00 0.00 0.00 2.24
6141 6470 0.685097 GGCCACACTTGTCAGGAGTA 59.315 55.000 0.00 0.00 0.00 2.59
6142 6471 1.451936 GGCCACACTTGTCAGGAGT 59.548 57.895 0.00 0.00 0.00 3.85
6143 6472 1.302832 GGGCCACACTTGTCAGGAG 60.303 63.158 4.39 0.00 0.00 3.69
6144 6473 2.075566 TGGGCCACACTTGTCAGGA 61.076 57.895 0.00 0.00 0.00 3.86
6145 6474 1.898574 GTGGGCCACACTTGTCAGG 60.899 63.158 31.26 0.00 46.72 3.86
6146 6475 3.749981 GTGGGCCACACTTGTCAG 58.250 61.111 31.26 0.00 46.72 3.51
6154 6483 4.805044 CACAATGTTAAGTGTGGGCCACA 61.805 47.826 34.67 34.67 46.18 4.17
6155 6484 1.960689 ACAATGTTAAGTGTGGGCCAC 59.039 47.619 29.75 29.75 44.89 5.01
6156 6485 1.959985 CACAATGTTAAGTGTGGGCCA 59.040 47.619 0.00 0.00 46.18 5.36
6157 6486 2.723124 CACAATGTTAAGTGTGGGCC 57.277 50.000 0.00 0.00 46.18 5.80
6162 6491 6.620877 TCTCTATCCCACAATGTTAAGTGT 57.379 37.500 0.00 0.00 34.22 3.55
6163 6492 7.921786 TTTCTCTATCCCACAATGTTAAGTG 57.078 36.000 0.00 0.00 35.56 3.16
6164 6493 8.793592 GTTTTTCTCTATCCCACAATGTTAAGT 58.206 33.333 0.00 0.00 0.00 2.24
6165 6494 8.792633 TGTTTTTCTCTATCCCACAATGTTAAG 58.207 33.333 0.00 0.00 0.00 1.85
6166 6495 8.698973 TGTTTTTCTCTATCCCACAATGTTAA 57.301 30.769 0.00 0.00 0.00 2.01
6167 6496 8.739039 CATGTTTTTCTCTATCCCACAATGTTA 58.261 33.333 0.00 0.00 0.00 2.41
6168 6497 7.233348 ACATGTTTTTCTCTATCCCACAATGTT 59.767 33.333 0.00 0.00 0.00 2.71
6169 6498 6.721208 ACATGTTTTTCTCTATCCCACAATGT 59.279 34.615 0.00 0.00 0.00 2.71
6170 6499 7.031372 CACATGTTTTTCTCTATCCCACAATG 58.969 38.462 0.00 0.00 0.00 2.82
6171 6500 6.153340 CCACATGTTTTTCTCTATCCCACAAT 59.847 38.462 0.00 0.00 0.00 2.71
6172 6501 5.476599 CCACATGTTTTTCTCTATCCCACAA 59.523 40.000 0.00 0.00 0.00 3.33
6173 6502 5.009631 CCACATGTTTTTCTCTATCCCACA 58.990 41.667 0.00 0.00 0.00 4.17
6174 6503 4.399303 CCCACATGTTTTTCTCTATCCCAC 59.601 45.833 0.00 0.00 0.00 4.61
6175 6504 4.569653 CCCCACATGTTTTTCTCTATCCCA 60.570 45.833 0.00 0.00 0.00 4.37
6176 6505 3.954258 CCCCACATGTTTTTCTCTATCCC 59.046 47.826 0.00 0.00 0.00 3.85
6177 6506 3.381590 GCCCCACATGTTTTTCTCTATCC 59.618 47.826 0.00 0.00 0.00 2.59
6178 6507 4.273318 AGCCCCACATGTTTTTCTCTATC 58.727 43.478 0.00 0.00 0.00 2.08
6179 6508 4.322057 AGCCCCACATGTTTTTCTCTAT 57.678 40.909 0.00 0.00 0.00 1.98
6180 6509 3.806949 AGCCCCACATGTTTTTCTCTA 57.193 42.857 0.00 0.00 0.00 2.43
6181 6510 2.683211 AGCCCCACATGTTTTTCTCT 57.317 45.000 0.00 0.00 0.00 3.10
6182 6511 2.755103 CCTAGCCCCACATGTTTTTCTC 59.245 50.000 0.00 0.00 0.00 2.87
6183 6512 2.110011 ACCTAGCCCCACATGTTTTTCT 59.890 45.455 0.00 0.00 0.00 2.52
6184 6513 2.231235 CACCTAGCCCCACATGTTTTTC 59.769 50.000 0.00 0.00 0.00 2.29
6185 6514 2.247358 CACCTAGCCCCACATGTTTTT 58.753 47.619 0.00 0.00 0.00 1.94
6186 6515 1.146982 ACACCTAGCCCCACATGTTTT 59.853 47.619 0.00 0.00 0.00 2.43
6187 6516 0.777446 ACACCTAGCCCCACATGTTT 59.223 50.000 0.00 0.00 0.00 2.83
6188 6517 1.663911 TACACCTAGCCCCACATGTT 58.336 50.000 0.00 0.00 0.00 2.71
6189 6518 1.893315 ATACACCTAGCCCCACATGT 58.107 50.000 0.00 0.00 0.00 3.21
6190 6519 3.297134 AAATACACCTAGCCCCACATG 57.703 47.619 0.00 0.00 0.00 3.21
6191 6520 3.627237 CCAAAATACACCTAGCCCCACAT 60.627 47.826 0.00 0.00 0.00 3.21
6192 6521 2.291282 CCAAAATACACCTAGCCCCACA 60.291 50.000 0.00 0.00 0.00 4.17
6193 6522 2.291346 ACCAAAATACACCTAGCCCCAC 60.291 50.000 0.00 0.00 0.00 4.61
6194 6523 1.997040 ACCAAAATACACCTAGCCCCA 59.003 47.619 0.00 0.00 0.00 4.96
6195 6524 2.025699 TGACCAAAATACACCTAGCCCC 60.026 50.000 0.00 0.00 0.00 5.80
6196 6525 3.359695 TGACCAAAATACACCTAGCCC 57.640 47.619 0.00 0.00 0.00 5.19
6197 6526 7.717875 TGTTATATGACCAAAATACACCTAGCC 59.282 37.037 0.00 0.00 0.00 3.93
6198 6527 8.671384 TGTTATATGACCAAAATACACCTAGC 57.329 34.615 0.00 0.00 0.00 3.42
6200 6529 9.567776 CCATGTTATATGACCAAAATACACCTA 57.432 33.333 0.00 0.00 0.00 3.08
6201 6530 8.058847 ACCATGTTATATGACCAAAATACACCT 58.941 33.333 0.00 0.00 0.00 4.00
6202 6531 8.232913 ACCATGTTATATGACCAAAATACACC 57.767 34.615 0.00 0.00 0.00 4.16
6203 6532 8.898761 TGACCATGTTATATGACCAAAATACAC 58.101 33.333 0.00 0.00 0.00 2.90
6204 6533 9.467796 TTGACCATGTTATATGACCAAAATACA 57.532 29.630 0.00 0.00 0.00 2.29
6205 6534 9.730420 GTTGACCATGTTATATGACCAAAATAC 57.270 33.333 0.00 0.00 0.00 1.89
6206 6535 8.616942 CGTTGACCATGTTATATGACCAAAATA 58.383 33.333 0.00 0.00 0.00 1.40
6207 6536 7.416213 CCGTTGACCATGTTATATGACCAAAAT 60.416 37.037 0.00 0.00 0.00 1.82
6208 6537 6.127869 CCGTTGACCATGTTATATGACCAAAA 60.128 38.462 0.00 0.00 0.00 2.44
6209 6538 5.355630 CCGTTGACCATGTTATATGACCAAA 59.644 40.000 0.00 0.00 0.00 3.28
6210 6539 4.878971 CCGTTGACCATGTTATATGACCAA 59.121 41.667 0.00 0.00 0.00 3.67
6211 6540 4.447290 CCGTTGACCATGTTATATGACCA 58.553 43.478 0.00 0.00 0.00 4.02
6212 6541 3.813166 CCCGTTGACCATGTTATATGACC 59.187 47.826 0.00 0.00 0.00 4.02
6213 6542 4.448210 ACCCGTTGACCATGTTATATGAC 58.552 43.478 0.00 0.00 0.00 3.06
6214 6543 4.764050 ACCCGTTGACCATGTTATATGA 57.236 40.909 0.00 0.00 0.00 2.15
6215 6544 5.355630 TGAAACCCGTTGACCATGTTATATG 59.644 40.000 0.00 0.00 0.00 1.78
6216 6545 5.355910 GTGAAACCCGTTGACCATGTTATAT 59.644 40.000 0.00 0.00 0.00 0.86
6217 6546 4.696402 GTGAAACCCGTTGACCATGTTATA 59.304 41.667 0.00 0.00 0.00 0.98
6218 6547 3.504520 GTGAAACCCGTTGACCATGTTAT 59.495 43.478 0.00 0.00 0.00 1.89
6219 6548 2.879646 GTGAAACCCGTTGACCATGTTA 59.120 45.455 0.00 0.00 0.00 2.41
6220 6549 1.679153 GTGAAACCCGTTGACCATGTT 59.321 47.619 0.00 0.00 0.00 2.71
6221 6550 1.314730 GTGAAACCCGTTGACCATGT 58.685 50.000 0.00 0.00 0.00 3.21
6234 6563 1.142474 CCGTTACTGTCGGGTGAAAC 58.858 55.000 0.30 0.00 43.68 2.78
6235 6564 3.591979 CCGTTACTGTCGGGTGAAA 57.408 52.632 0.30 0.00 43.68 2.69
6241 6570 5.196238 GTCATTAGACACCGTTACTGTCGG 61.196 50.000 6.40 6.40 44.34 4.79
6242 6571 3.850273 GTCATTAGACACCGTTACTGTCG 59.150 47.826 0.22 0.00 44.34 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.