Multiple sequence alignment - TraesCS4B01G376700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G376700 chr4B 100.000 1761 0 0 1 1761 660180265 660178505 0.000000e+00 3253
1 TraesCS4B01G376700 chr4B 88.544 515 53 6 992 1502 660247979 660247467 9.910000e-174 619
2 TraesCS4B01G376700 chr4B 85.825 515 61 7 986 1498 660401758 660401254 1.030000e-148 536
3 TraesCS4B01G376700 chr4B 86.585 492 49 10 375 857 660248472 660247989 6.180000e-146 527
4 TraesCS4B01G376700 chr4B 85.409 514 65 5 986 1498 660397861 660397357 2.220000e-145 525
5 TraesCS4B01G376700 chr4B 100.000 243 0 0 2279 2521 660177987 660177745 1.380000e-122 449
6 TraesCS4B01G376700 chr4B 96.708 243 8 0 2279 2521 650079854 650079612 3.020000e-109 405
7 TraesCS4B01G376700 chr4B 96.296 243 9 0 2279 2521 4770672 4770430 1.400000e-107 399
8 TraesCS4B01G376700 chr4B 95.885 243 10 0 2279 2521 48446398 48446156 6.540000e-106 394
9 TraesCS4B01G376700 chr4B 88.417 259 24 6 1499 1755 261780706 261780960 8.760000e-80 307
10 TraesCS4B01G376700 chr4B 87.160 257 29 4 1499 1755 650067678 650067426 3.170000e-74 289
11 TraesCS4B01G376700 chr4B 86.381 257 29 6 1499 1755 650128806 650128556 2.470000e-70 276
12 TraesCS4B01G376700 chr4B 86.381 257 30 5 1499 1755 650129639 650129388 2.470000e-70 276
13 TraesCS4B01G376700 chr4B 93.525 139 9 0 864 1002 664153366 664153504 9.140000e-50 207
14 TraesCS4B01G376700 chr4B 96.078 102 2 1 239 338 660248569 660248468 5.580000e-37 165
15 TraesCS4B01G376700 chr4B 81.818 176 21 5 504 677 660403504 660403338 1.220000e-28 137
16 TraesCS4B01G376700 chr5A 90.078 514 45 5 993 1502 699520938 699520427 0.000000e+00 662
17 TraesCS4B01G376700 chr5A 86.931 505 57 8 995 1493 700372316 700372817 2.190000e-155 558
18 TraesCS4B01G376700 chr5A 89.239 381 28 6 485 865 699521313 699520946 4.910000e-127 464
19 TraesCS4B01G376700 chr5A 91.176 272 19 4 239 510 699873914 699874180 5.120000e-97 364
20 TraesCS4B01G376700 chr5A 89.818 275 21 5 239 510 699538180 699537910 1.860000e-91 346
21 TraesCS4B01G376700 chr5A 94.712 208 8 3 243 450 699521518 699521314 1.130000e-83 320
22 TraesCS4B01G376700 chr5A 97.076 171 5 0 1 171 180144461 180144631 3.170000e-74 289
23 TraesCS4B01G376700 chr5A 95.858 169 7 0 1 169 494568056 494568224 8.880000e-70 274
24 TraesCS4B01G376700 chr5A 92.414 145 9 2 867 1009 618188100 618188244 3.290000e-49 206
25 TraesCS4B01G376700 chrUn 88.867 512 43 5 354 865 190755607 190756104 3.560000e-173 617
26 TraesCS4B01G376700 chrUn 87.475 503 56 6 997 1498 110265671 110265175 7.820000e-160 573
27 TraesCS4B01G376700 chrUn 86.561 506 62 6 995 1498 110327052 110326551 1.020000e-153 553
28 TraesCS4B01G376700 chrUn 86.078 510 61 9 995 1498 110208570 110208065 7.930000e-150 540
29 TraesCS4B01G376700 chrUn 86.078 510 61 9 995 1498 110270974 110270469 7.930000e-150 540
30 TraesCS4B01G376700 chrUn 86.381 257 29 6 1499 1755 298656399 298656649 2.470000e-70 276
31 TraesCS4B01G376700 chrUn 86.381 257 29 6 1499 1755 298666874 298666624 2.470000e-70 276
32 TraesCS4B01G376700 chrUn 84.270 178 20 6 504 677 110291155 110290982 1.550000e-37 167
33 TraesCS4B01G376700 chrUn 97.647 85 2 0 285 369 190755507 190755591 2.020000e-31 147
34 TraesCS4B01G376700 chr2B 97.531 243 6 0 2279 2521 81809257 81809499 1.400000e-112 416
35 TraesCS4B01G376700 chr2B 97.119 243 7 0 2279 2521 45024618 45024376 6.490000e-111 411
36 TraesCS4B01G376700 chr2B 88.327 257 20 4 1499 1755 3181495 3181741 1.470000e-77 300
37 TraesCS4B01G376700 chr2B 95.652 138 5 1 856 993 21749446 21749582 1.170000e-53 220
38 TraesCS4B01G376700 chr1B 97.531 243 6 0 2279 2521 674834491 674834733 1.400000e-112 416
39 TraesCS4B01G376700 chr1B 97.119 243 7 0 2279 2521 295062354 295062596 6.490000e-111 411
40 TraesCS4B01G376700 chr1B 97.093 172 5 0 1 172 628508214 628508385 8.820000e-75 291
41 TraesCS4B01G376700 chr1B 94.815 135 7 0 867 1001 520100257 520100391 7.070000e-51 211
42 TraesCS4B01G376700 chr7B 96.708 243 8 0 2279 2521 365251067 365251309 3.020000e-109 405
43 TraesCS4B01G376700 chr7B 97.041 169 5 0 1 169 283010656 283010824 4.100000e-73 285
44 TraesCS4B01G376700 chr7B 96.491 171 6 0 1 171 18992026 18992196 1.480000e-72 283
45 TraesCS4B01G376700 chr5B 96.296 243 9 0 2279 2521 25427973 25428215 1.400000e-107 399
46 TraesCS4B01G376700 chr5B 97.076 171 5 0 1 171 568737874 568738044 3.170000e-74 289
47 TraesCS4B01G376700 chr7D 88.983 236 23 3 1499 1732 610026929 610026695 3.170000e-74 289
48 TraesCS4B01G376700 chr5D 87.903 248 24 6 1499 1742 15872378 15872623 1.140000e-73 287
49 TraesCS4B01G376700 chr2A 96.491 171 6 0 1 171 715378834 715379004 1.480000e-72 283
50 TraesCS4B01G376700 chr2A 96.491 171 6 0 1 171 746953838 746953668 1.480000e-72 283
51 TraesCS4B01G376700 chr6A 95.906 171 7 0 1 171 38757923 38758093 6.870000e-71 278
52 TraesCS4B01G376700 chr7A 94.891 137 6 1 864 999 710494807 710494671 1.960000e-51 213
53 TraesCS4B01G376700 chr3D 94.891 137 6 1 863 999 464998592 464998727 1.960000e-51 213
54 TraesCS4B01G376700 chr4A 94.815 135 7 0 859 993 165056671 165056537 7.070000e-51 211
55 TraesCS4B01G376700 chr3A 96.094 128 5 0 867 994 584748652 584748779 2.540000e-50 209
56 TraesCS4B01G376700 chr3A 92.958 142 8 2 867 1007 383710068 383709928 3.290000e-49 206


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G376700 chr4B 660177745 660180265 2520 True 1851.000000 3253 100.000000 1 2521 2 chr4B.!!$R6 2520
1 TraesCS4B01G376700 chr4B 660247467 660248569 1102 True 437.000000 619 90.402333 239 1502 3 chr4B.!!$R7 1263
2 TraesCS4B01G376700 chr4B 660397357 660403504 6147 True 399.333333 536 84.350667 504 1498 3 chr4B.!!$R8 994
3 TraesCS4B01G376700 chr4B 650128556 650129639 1083 True 276.000000 276 86.381000 1499 1755 2 chr4B.!!$R5 256
4 TraesCS4B01G376700 chr5A 700372316 700372817 501 False 558.000000 558 86.931000 995 1493 1 chr5A.!!$F5 498
5 TraesCS4B01G376700 chr5A 699520427 699521518 1091 True 482.000000 662 91.343000 243 1502 3 chr5A.!!$R2 1259
6 TraesCS4B01G376700 chrUn 110326551 110327052 501 True 553.000000 553 86.561000 995 1498 1 chrUn.!!$R5 503
7 TraesCS4B01G376700 chrUn 110208065 110208570 505 True 540.000000 540 86.078000 995 1498 1 chrUn.!!$R1 503
8 TraesCS4B01G376700 chrUn 110270469 110270974 505 True 540.000000 540 86.078000 995 1498 1 chrUn.!!$R3 503
9 TraesCS4B01G376700 chrUn 190755507 190756104 597 False 382.000000 617 93.257000 285 865 2 chrUn.!!$F2 580

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
220 221 0.310854 CGTGTTCCAAAGTTCTGCCC 59.689 55.0 0.0 0.0 0.00 5.36 F
1304 2703 0.462047 ATCCGATGGAAGTCAACGCC 60.462 55.0 0.0 0.0 39.81 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1427 2826 0.178987 AGGGAGCATAGTCGATCCGT 60.179 55.0 0.0 0.0 42.62 4.69 R
2485 7476 0.032217 AAGAGAGGCAGAGGGAGGAG 60.032 60.0 0.0 0.0 0.00 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 3.961477 TTTGAAGTGTGTGATGTTCCG 57.039 42.857 0.00 0.00 0.00 4.30
53 54 1.877637 TGAAGTGTGTGATGTTCCGG 58.122 50.000 0.00 0.00 0.00 5.14
54 55 1.140052 TGAAGTGTGTGATGTTCCGGT 59.860 47.619 0.00 0.00 0.00 5.28
55 56 2.365941 TGAAGTGTGTGATGTTCCGGTA 59.634 45.455 0.00 0.00 0.00 4.02
56 57 3.181464 TGAAGTGTGTGATGTTCCGGTAA 60.181 43.478 0.00 0.00 0.00 2.85
57 58 2.762745 AGTGTGTGATGTTCCGGTAAC 58.237 47.619 0.00 5.56 38.67 2.50
58 59 2.367567 AGTGTGTGATGTTCCGGTAACT 59.632 45.455 0.00 0.00 38.99 2.24
59 60 3.135994 GTGTGTGATGTTCCGGTAACTT 58.864 45.455 0.00 3.15 38.99 2.66
60 61 4.039488 AGTGTGTGATGTTCCGGTAACTTA 59.961 41.667 0.00 0.00 38.99 2.24
61 62 4.387862 GTGTGTGATGTTCCGGTAACTTAG 59.612 45.833 0.00 0.00 38.99 2.18
62 63 3.370061 GTGTGATGTTCCGGTAACTTAGC 59.630 47.826 0.00 0.00 38.99 3.09
63 64 3.259876 TGTGATGTTCCGGTAACTTAGCT 59.740 43.478 0.00 0.00 38.99 3.32
64 65 4.463539 TGTGATGTTCCGGTAACTTAGCTA 59.536 41.667 0.00 0.00 38.99 3.32
65 66 5.041940 GTGATGTTCCGGTAACTTAGCTAG 58.958 45.833 0.00 0.00 38.99 3.42
66 67 4.708421 TGATGTTCCGGTAACTTAGCTAGT 59.292 41.667 0.00 0.00 38.99 2.57
68 69 6.377996 TGATGTTCCGGTAACTTAGCTAGTTA 59.622 38.462 0.00 10.09 45.22 2.24
77 78 4.884668 ACTTAGCTAGTTACCACAAGCA 57.115 40.909 0.00 0.00 37.44 3.91
78 79 4.566987 ACTTAGCTAGTTACCACAAGCAC 58.433 43.478 0.00 0.00 37.44 4.40
79 80 2.474410 AGCTAGTTACCACAAGCACC 57.526 50.000 0.00 0.00 37.44 5.01
80 81 1.978580 AGCTAGTTACCACAAGCACCT 59.021 47.619 0.00 0.00 37.44 4.00
81 82 2.028020 AGCTAGTTACCACAAGCACCTC 60.028 50.000 0.00 0.00 37.44 3.85
82 83 2.028020 GCTAGTTACCACAAGCACCTCT 60.028 50.000 0.00 0.00 35.05 3.69
83 84 2.841442 AGTTACCACAAGCACCTCTC 57.159 50.000 0.00 0.00 0.00 3.20
84 85 2.330216 AGTTACCACAAGCACCTCTCT 58.670 47.619 0.00 0.00 0.00 3.10
85 86 2.300437 AGTTACCACAAGCACCTCTCTC 59.700 50.000 0.00 0.00 0.00 3.20
86 87 2.300437 GTTACCACAAGCACCTCTCTCT 59.700 50.000 0.00 0.00 0.00 3.10
87 88 1.428869 ACCACAAGCACCTCTCTCTT 58.571 50.000 0.00 0.00 0.00 2.85
88 89 1.346068 ACCACAAGCACCTCTCTCTTC 59.654 52.381 0.00 0.00 0.00 2.87
89 90 1.345741 CCACAAGCACCTCTCTCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
90 91 2.027377 CCACAAGCACCTCTCTCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
91 92 3.558746 CCACAAGCACCTCTCTCTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
92 93 4.323028 CCACAAGCACCTCTCTCTTCATTA 60.323 45.833 0.00 0.00 0.00 1.90
93 94 5.240891 CACAAGCACCTCTCTCTTCATTAA 58.759 41.667 0.00 0.00 0.00 1.40
94 95 5.702670 CACAAGCACCTCTCTCTTCATTAAA 59.297 40.000 0.00 0.00 0.00 1.52
95 96 6.373774 CACAAGCACCTCTCTCTTCATTAAAT 59.626 38.462 0.00 0.00 0.00 1.40
96 97 7.550551 CACAAGCACCTCTCTCTTCATTAAATA 59.449 37.037 0.00 0.00 0.00 1.40
97 98 8.270744 ACAAGCACCTCTCTCTTCATTAAATAT 58.729 33.333 0.00 0.00 0.00 1.28
98 99 8.557864 CAAGCACCTCTCTCTTCATTAAATATG 58.442 37.037 0.00 0.00 0.00 1.78
99 100 7.800092 AGCACCTCTCTCTTCATTAAATATGT 58.200 34.615 0.00 0.00 0.00 2.29
100 101 7.714377 AGCACCTCTCTCTTCATTAAATATGTG 59.286 37.037 0.00 0.00 0.00 3.21
101 102 7.519649 GCACCTCTCTCTTCATTAAATATGTGC 60.520 40.741 0.00 0.00 35.67 4.57
102 103 6.995091 ACCTCTCTCTTCATTAAATATGTGCC 59.005 38.462 0.00 0.00 0.00 5.01
103 104 6.994496 CCTCTCTCTTCATTAAATATGTGCCA 59.006 38.462 0.00 0.00 0.00 4.92
104 105 7.041508 CCTCTCTCTTCATTAAATATGTGCCAC 60.042 40.741 0.00 0.00 0.00 5.01
105 106 7.337938 TCTCTCTTCATTAAATATGTGCCACA 58.662 34.615 0.00 0.00 0.00 4.17
106 107 7.994911 TCTCTCTTCATTAAATATGTGCCACAT 59.005 33.333 15.69 15.69 42.35 3.21
107 108 9.276590 CTCTCTTCATTAAATATGTGCCACATA 57.723 33.333 19.16 19.16 44.29 2.29
108 109 9.625747 TCTCTTCATTAAATATGTGCCACATAA 57.374 29.630 20.57 7.37 43.50 1.90
109 110 9.888878 CTCTTCATTAAATATGTGCCACATAAG 57.111 33.333 20.57 12.73 43.50 1.73
110 111 9.625747 TCTTCATTAAATATGTGCCACATAAGA 57.374 29.630 20.57 14.63 43.50 2.10
117 118 8.761575 AAATATGTGCCACATAAGAAAAGTTG 57.238 30.769 20.57 0.00 43.50 3.16
118 119 5.789643 ATGTGCCACATAAGAAAAGTTGT 57.210 34.783 8.96 0.00 36.99 3.32
119 120 6.892658 ATGTGCCACATAAGAAAAGTTGTA 57.107 33.333 8.96 0.00 36.99 2.41
120 121 6.892658 TGTGCCACATAAGAAAAGTTGTAT 57.107 33.333 0.00 0.00 0.00 2.29
121 122 7.283625 TGTGCCACATAAGAAAAGTTGTATT 57.716 32.000 0.00 0.00 0.00 1.89
122 123 7.144661 TGTGCCACATAAGAAAAGTTGTATTG 58.855 34.615 0.00 0.00 0.00 1.90
123 124 6.586082 GTGCCACATAAGAAAAGTTGTATTGG 59.414 38.462 0.00 0.00 0.00 3.16
124 125 6.491745 TGCCACATAAGAAAAGTTGTATTGGA 59.508 34.615 0.00 0.00 0.00 3.53
125 126 7.029563 GCCACATAAGAAAAGTTGTATTGGAG 58.970 38.462 0.00 0.00 0.00 3.86
126 127 7.309194 GCCACATAAGAAAAGTTGTATTGGAGT 60.309 37.037 0.00 0.00 0.00 3.85
127 128 9.226606 CCACATAAGAAAAGTTGTATTGGAGTA 57.773 33.333 0.00 0.00 0.00 2.59
132 133 8.918202 AAGAAAAGTTGTATTGGAGTATGTGA 57.082 30.769 0.00 0.00 0.00 3.58
133 134 9.520515 AAGAAAAGTTGTATTGGAGTATGTGAT 57.479 29.630 0.00 0.00 0.00 3.06
134 135 8.950210 AGAAAAGTTGTATTGGAGTATGTGATG 58.050 33.333 0.00 0.00 0.00 3.07
135 136 8.635765 AAAAGTTGTATTGGAGTATGTGATGT 57.364 30.769 0.00 0.00 0.00 3.06
136 137 8.635765 AAAGTTGTATTGGAGTATGTGATGTT 57.364 30.769 0.00 0.00 0.00 2.71
137 138 9.733556 AAAGTTGTATTGGAGTATGTGATGTTA 57.266 29.630 0.00 0.00 0.00 2.41
138 139 8.718102 AGTTGTATTGGAGTATGTGATGTTAC 57.282 34.615 0.00 0.00 0.00 2.50
139 140 8.540388 AGTTGTATTGGAGTATGTGATGTTACT 58.460 33.333 0.00 0.00 0.00 2.24
140 141 8.818057 GTTGTATTGGAGTATGTGATGTTACTC 58.182 37.037 2.26 2.26 42.27 2.59
147 148 7.907214 GAGTATGTGATGTTACTCCAAAGTT 57.093 36.000 0.00 0.00 38.81 2.66
148 149 8.997621 GAGTATGTGATGTTACTCCAAAGTTA 57.002 34.615 0.00 0.00 38.81 2.24
149 150 8.773404 AGTATGTGATGTTACTCCAAAGTTAC 57.227 34.615 0.00 0.00 36.92 2.50
150 151 8.594550 AGTATGTGATGTTACTCCAAAGTTACT 58.405 33.333 0.00 0.00 36.29 2.24
151 152 7.907214 ATGTGATGTTACTCCAAAGTTACTC 57.093 36.000 0.00 0.00 36.29 2.59
152 153 6.228258 TGTGATGTTACTCCAAAGTTACTCC 58.772 40.000 0.00 0.00 36.29 3.85
153 154 5.642491 GTGATGTTACTCCAAAGTTACTCCC 59.358 44.000 0.00 0.00 36.29 4.30
154 155 4.628963 TGTTACTCCAAAGTTACTCCCC 57.371 45.455 0.00 0.00 36.29 4.81
155 156 3.975312 TGTTACTCCAAAGTTACTCCCCA 59.025 43.478 0.00 0.00 36.29 4.96
156 157 4.202388 TGTTACTCCAAAGTTACTCCCCAC 60.202 45.833 0.00 0.00 36.29 4.61
157 158 2.702748 ACTCCAAAGTTACTCCCCACT 58.297 47.619 0.00 0.00 28.74 4.00
158 159 2.372172 ACTCCAAAGTTACTCCCCACTG 59.628 50.000 0.00 0.00 28.74 3.66
159 160 2.372172 CTCCAAAGTTACTCCCCACTGT 59.628 50.000 0.00 0.00 0.00 3.55
160 161 2.105821 TCCAAAGTTACTCCCCACTGTG 59.894 50.000 0.00 0.00 0.00 3.66
161 162 2.105821 CCAAAGTTACTCCCCACTGTGA 59.894 50.000 9.86 0.00 30.64 3.58
162 163 3.139077 CAAAGTTACTCCCCACTGTGAC 58.861 50.000 9.86 0.00 30.64 3.67
163 164 1.349067 AGTTACTCCCCACTGTGACC 58.651 55.000 9.86 0.00 0.00 4.02
164 165 1.053424 GTTACTCCCCACTGTGACCA 58.947 55.000 9.86 0.00 0.00 4.02
165 166 1.002087 GTTACTCCCCACTGTGACCAG 59.998 57.143 9.86 4.01 44.68 4.00
166 167 1.192146 TACTCCCCACTGTGACCAGC 61.192 60.000 9.86 0.00 42.81 4.85
167 168 3.249189 TCCCCACTGTGACCAGCC 61.249 66.667 9.86 0.00 42.81 4.85
168 169 3.252284 CCCCACTGTGACCAGCCT 61.252 66.667 9.86 0.00 42.81 4.58
169 170 1.918293 CCCCACTGTGACCAGCCTA 60.918 63.158 9.86 0.00 42.81 3.93
170 171 1.488705 CCCCACTGTGACCAGCCTAA 61.489 60.000 9.86 0.00 42.81 2.69
171 172 0.620556 CCCACTGTGACCAGCCTAAT 59.379 55.000 9.86 0.00 42.81 1.73
172 173 1.837439 CCCACTGTGACCAGCCTAATA 59.163 52.381 9.86 0.00 42.81 0.98
173 174 2.439507 CCCACTGTGACCAGCCTAATAT 59.560 50.000 9.86 0.00 42.81 1.28
174 175 3.646162 CCCACTGTGACCAGCCTAATATA 59.354 47.826 9.86 0.00 42.81 0.86
175 176 4.287067 CCCACTGTGACCAGCCTAATATAT 59.713 45.833 9.86 0.00 42.81 0.86
176 177 5.221925 CCCACTGTGACCAGCCTAATATATT 60.222 44.000 9.86 2.97 42.81 1.28
177 178 6.299141 CCACTGTGACCAGCCTAATATATTT 58.701 40.000 9.86 0.00 42.81 1.40
178 179 6.772716 CCACTGTGACCAGCCTAATATATTTT 59.227 38.462 9.86 0.00 42.81 1.82
179 180 7.285401 CCACTGTGACCAGCCTAATATATTTTT 59.715 37.037 9.86 0.00 42.81 1.94
198 199 4.394439 TTTTGATATCACCGGACGATGA 57.606 40.909 9.46 0.27 0.00 2.92
199 200 3.364889 TTGATATCACCGGACGATGAC 57.635 47.619 9.46 8.83 0.00 3.06
200 201 2.583143 TGATATCACCGGACGATGACT 58.417 47.619 9.46 0.00 0.00 3.41
201 202 2.552743 TGATATCACCGGACGATGACTC 59.447 50.000 9.46 9.09 0.00 3.36
213 214 2.404215 CGATGACTCGTGTTCCAAAGT 58.596 47.619 0.00 0.00 40.07 2.66
214 215 2.800544 CGATGACTCGTGTTCCAAAGTT 59.199 45.455 0.00 0.00 40.07 2.66
215 216 3.120991 CGATGACTCGTGTTCCAAAGTTC 60.121 47.826 0.00 0.00 40.07 3.01
216 217 3.536956 TGACTCGTGTTCCAAAGTTCT 57.463 42.857 0.00 0.00 0.00 3.01
217 218 3.194861 TGACTCGTGTTCCAAAGTTCTG 58.805 45.455 0.00 0.00 0.00 3.02
218 219 1.940613 ACTCGTGTTCCAAAGTTCTGC 59.059 47.619 0.00 0.00 0.00 4.26
219 220 1.264288 CTCGTGTTCCAAAGTTCTGCC 59.736 52.381 0.00 0.00 0.00 4.85
220 221 0.310854 CGTGTTCCAAAGTTCTGCCC 59.689 55.000 0.00 0.00 0.00 5.36
221 222 1.692411 GTGTTCCAAAGTTCTGCCCT 58.308 50.000 0.00 0.00 0.00 5.19
222 223 2.031870 GTGTTCCAAAGTTCTGCCCTT 58.968 47.619 0.00 0.00 0.00 3.95
223 224 2.031120 TGTTCCAAAGTTCTGCCCTTG 58.969 47.619 0.00 0.00 0.00 3.61
224 225 2.306847 GTTCCAAAGTTCTGCCCTTGA 58.693 47.619 0.00 0.00 0.00 3.02
225 226 2.893489 GTTCCAAAGTTCTGCCCTTGAT 59.107 45.455 0.00 0.00 0.00 2.57
226 227 3.243359 TCCAAAGTTCTGCCCTTGATT 57.757 42.857 0.00 0.00 0.00 2.57
227 228 3.575805 TCCAAAGTTCTGCCCTTGATTT 58.424 40.909 0.00 0.00 0.00 2.17
228 229 3.966665 TCCAAAGTTCTGCCCTTGATTTT 59.033 39.130 0.00 0.00 0.00 1.82
229 230 4.060205 CCAAAGTTCTGCCCTTGATTTTG 58.940 43.478 0.00 0.00 0.00 2.44
230 231 4.060205 CAAAGTTCTGCCCTTGATTTTGG 58.940 43.478 0.00 0.00 0.00 3.28
231 232 3.243359 AGTTCTGCCCTTGATTTTGGA 57.757 42.857 0.00 0.00 0.00 3.53
232 233 3.160269 AGTTCTGCCCTTGATTTTGGAG 58.840 45.455 0.00 0.00 0.00 3.86
233 234 2.220653 TCTGCCCTTGATTTTGGAGG 57.779 50.000 0.00 0.00 0.00 4.30
234 235 1.710244 TCTGCCCTTGATTTTGGAGGA 59.290 47.619 0.00 0.00 32.11 3.71
235 236 2.312741 TCTGCCCTTGATTTTGGAGGAT 59.687 45.455 0.00 0.00 32.11 3.24
236 237 2.429610 CTGCCCTTGATTTTGGAGGATG 59.570 50.000 0.00 0.00 32.11 3.51
237 238 1.758862 GCCCTTGATTTTGGAGGATGG 59.241 52.381 0.00 0.00 32.11 3.51
373 408 3.254060 CAGGTGACTTTGTCTATGTCGG 58.746 50.000 0.00 0.00 40.21 4.79
383 418 0.471191 TCTATGTCGGCCTCGAGGTA 59.529 55.000 31.43 15.49 46.91 3.08
384 419 1.073444 TCTATGTCGGCCTCGAGGTAT 59.927 52.381 31.43 19.18 46.91 2.73
392 427 2.100252 CGGCCTCGAGGTATAGAAAACA 59.900 50.000 31.43 0.00 39.00 2.83
451 486 3.365291 TATGACCTCGTGCGCACCC 62.365 63.158 33.23 17.57 0.00 4.61
462 497 2.330041 CGCACCCGTTTTCACCAC 59.670 61.111 0.00 0.00 0.00 4.16
478 513 4.944048 TCACCACGACCAAGTATATGATG 58.056 43.478 0.00 0.00 0.00 3.07
483 521 3.181479 ACGACCAAGTATATGATGCGTGT 60.181 43.478 0.00 0.00 0.00 4.49
535 575 1.839994 ACTATGGTGATGGGTGGTGAG 59.160 52.381 0.00 0.00 0.00 3.51
551 591 1.338020 GTGAGTTTTGCTGGAACCAGG 59.662 52.381 20.38 4.81 43.77 4.45
562 602 2.993264 AACCAGGCCTGCATGCAC 60.993 61.111 28.39 8.17 0.00 4.57
567 607 2.674033 GGCCTGCATGCACTGTGA 60.674 61.111 18.46 0.00 0.00 3.58
570 610 0.674581 GCCTGCATGCACTGTGACTA 60.675 55.000 18.46 0.00 0.00 2.59
571 611 2.015588 GCCTGCATGCACTGTGACTAT 61.016 52.381 18.46 0.00 0.00 2.12
572 612 1.669265 CCTGCATGCACTGTGACTATG 59.331 52.381 18.46 12.75 0.00 2.23
573 613 1.669265 CTGCATGCACTGTGACTATGG 59.331 52.381 18.46 0.00 0.00 2.74
574 614 1.003464 TGCATGCACTGTGACTATGGT 59.997 47.619 18.46 0.00 0.00 3.55
575 615 1.399440 GCATGCACTGTGACTATGGTG 59.601 52.381 14.21 0.29 0.00 4.17
576 616 2.936553 GCATGCACTGTGACTATGGTGA 60.937 50.000 14.21 0.00 32.12 4.02
596 636 5.940470 GGTGATGGGTGAGATGGATAAATAC 59.060 44.000 0.00 0.00 0.00 1.89
618 659 5.833082 ACTCATAATTACTACTCAGCCGTG 58.167 41.667 0.00 0.00 0.00 4.94
706 2090 1.466167 CAGCAACCAGAGACCATTTCG 59.534 52.381 0.00 0.00 0.00 3.46
754 2141 4.032960 TGTCTATTGCCCACAAGTTCAT 57.967 40.909 0.00 0.00 39.69 2.57
757 2146 4.941263 GTCTATTGCCCACAAGTTCATACA 59.059 41.667 0.00 0.00 39.69 2.29
803 2195 2.851195 ACATCCCCTGCATATTCGAAC 58.149 47.619 0.00 0.00 0.00 3.95
814 2206 5.620206 TGCATATTCGAACCCATCACTTAT 58.380 37.500 0.00 0.00 0.00 1.73
842 2234 3.230743 ACACAAACAGAAACACAAGCC 57.769 42.857 0.00 0.00 0.00 4.35
857 2249 2.101415 ACAAGCCAAAAGAAGAGCCAAC 59.899 45.455 0.00 0.00 0.00 3.77
858 2250 2.363359 CAAGCCAAAAGAAGAGCCAACT 59.637 45.455 0.00 0.00 0.00 3.16
865 2257 6.071896 GCCAAAAGAAGAGCCAACTAAACTAT 60.072 38.462 0.00 0.00 0.00 2.12
866 2258 7.523873 GCCAAAAGAAGAGCCAACTAAACTATT 60.524 37.037 0.00 0.00 0.00 1.73
868 2260 9.827411 CAAAAGAAGAGCCAACTAAACTATTAC 57.173 33.333 0.00 0.00 0.00 1.89
869 2261 9.794719 AAAAGAAGAGCCAACTAAACTATTACT 57.205 29.630 0.00 0.00 0.00 2.24
870 2262 9.438228 AAAGAAGAGCCAACTAAACTATTACTC 57.562 33.333 0.00 0.00 0.00 2.59
871 2263 7.557724 AGAAGAGCCAACTAAACTATTACTCC 58.442 38.462 0.00 0.00 0.00 3.85
872 2264 6.236558 AGAGCCAACTAAACTATTACTCCC 57.763 41.667 0.00 0.00 0.00 4.30
873 2265 5.965091 AGAGCCAACTAAACTATTACTCCCT 59.035 40.000 0.00 0.00 0.00 4.20
874 2266 6.098552 AGAGCCAACTAAACTATTACTCCCTC 59.901 42.308 0.00 0.00 0.00 4.30
875 2267 5.130643 AGCCAACTAAACTATTACTCCCTCC 59.869 44.000 0.00 0.00 0.00 4.30
877 2269 5.128335 CCAACTAAACTATTACTCCCTCCGT 59.872 44.000 0.00 0.00 0.00 4.69
878 2270 6.351626 CCAACTAAACTATTACTCCCTCCGTT 60.352 42.308 0.00 0.00 0.00 4.44
879 2271 6.864151 ACTAAACTATTACTCCCTCCGTTT 57.136 37.500 0.00 0.00 0.00 3.60
880 2272 6.871844 ACTAAACTATTACTCCCTCCGTTTC 58.128 40.000 0.00 0.00 0.00 2.78
881 2273 4.382345 AACTATTACTCCCTCCGTTTCG 57.618 45.455 0.00 0.00 0.00 3.46
882 2274 3.624777 ACTATTACTCCCTCCGTTTCGA 58.375 45.455 0.00 0.00 0.00 3.71
884 2276 4.648307 ACTATTACTCCCTCCGTTTCGAAT 59.352 41.667 0.00 0.00 0.00 3.34
885 2277 3.967332 TTACTCCCTCCGTTTCGAATT 57.033 42.857 0.00 0.00 0.00 2.17
886 2278 5.603170 ATTACTCCCTCCGTTTCGAATTA 57.397 39.130 0.00 0.00 0.00 1.40
887 2279 3.242549 ACTCCCTCCGTTTCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
888 2280 2.830321 ACTCCCTCCGTTTCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
889 2281 3.260128 ACTCCCTCCGTTTCGAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
891 2283 3.007182 TCCCTCCGTTTCGAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
892 2284 3.370061 CCCTCCGTTTCGAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
893 2285 4.243270 CCTCCGTTTCGAATTACTTGTCT 58.757 43.478 0.00 0.00 0.00 3.41
894 2286 4.689345 CCTCCGTTTCGAATTACTTGTCTT 59.311 41.667 0.00 0.00 0.00 3.01
895 2287 5.389516 CCTCCGTTTCGAATTACTTGTCTTG 60.390 44.000 0.00 0.00 0.00 3.02
898 2290 5.121768 CCGTTTCGAATTACTTGTCTTGGAT 59.878 40.000 0.00 0.00 0.00 3.41
899 2291 6.348213 CCGTTTCGAATTACTTGTCTTGGATT 60.348 38.462 0.00 0.00 0.00 3.01
900 2292 7.075741 CGTTTCGAATTACTTGTCTTGGATTT 58.924 34.615 0.00 0.00 0.00 2.17
901 2293 7.059488 CGTTTCGAATTACTTGTCTTGGATTTG 59.941 37.037 0.00 0.00 0.00 2.32
902 2294 7.504924 TTCGAATTACTTGTCTTGGATTTGT 57.495 32.000 0.00 0.00 0.00 2.83
903 2295 7.129109 TCGAATTACTTGTCTTGGATTTGTC 57.871 36.000 0.00 0.00 0.00 3.18
904 2296 6.934645 TCGAATTACTTGTCTTGGATTTGTCT 59.065 34.615 0.00 0.00 0.00 3.41
908 2300 9.965902 AATTACTTGTCTTGGATTTGTCTAGAT 57.034 29.630 0.00 0.00 0.00 1.98
910 2302 9.871238 TTACTTGTCTTGGATTTGTCTAGATAC 57.129 33.333 0.00 0.00 0.00 2.24
911 2303 7.036220 ACTTGTCTTGGATTTGTCTAGATACG 58.964 38.462 0.00 0.00 0.00 3.06
912 2304 5.902681 TGTCTTGGATTTGTCTAGATACGG 58.097 41.667 0.00 0.00 0.00 4.02
914 2306 6.323996 TGTCTTGGATTTGTCTAGATACGGAT 59.676 38.462 0.00 0.00 0.00 4.18
915 2307 6.642950 GTCTTGGATTTGTCTAGATACGGATG 59.357 42.308 0.00 0.00 0.00 3.51
916 2308 6.323996 TCTTGGATTTGTCTAGATACGGATGT 59.676 38.462 0.00 0.00 0.00 3.06
917 2309 7.504574 TCTTGGATTTGTCTAGATACGGATGTA 59.495 37.037 0.00 0.00 34.45 2.29
918 2310 7.776618 TGGATTTGTCTAGATACGGATGTAT 57.223 36.000 0.00 0.00 43.97 2.29
934 2326 8.466617 ACGGATGTATCTAGACTCATTTTAGT 57.533 34.615 11.25 7.70 0.00 2.24
935 2327 8.353684 ACGGATGTATCTAGACTCATTTTAGTG 58.646 37.037 11.25 3.85 0.00 2.74
936 2328 8.353684 CGGATGTATCTAGACTCATTTTAGTGT 58.646 37.037 11.25 0.00 0.00 3.55
948 2340 8.873215 ACTCATTTTAGTGTTAGATACATCCG 57.127 34.615 0.00 0.00 39.39 4.18
949 2341 8.475639 ACTCATTTTAGTGTTAGATACATCCGT 58.524 33.333 0.00 0.00 39.39 4.69
950 2342 9.961265 CTCATTTTAGTGTTAGATACATCCGTA 57.039 33.333 0.00 0.00 39.39 4.02
967 2359 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
968 2360 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
969 2361 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
970 2362 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
971 2363 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
972 2364 8.407064 CCGTATCTAGACAAATCTAAGACAAGT 58.593 37.037 0.00 0.00 36.98 3.16
979 2371 8.480643 AGACAAATCTAAGACAAGTAATTCGG 57.519 34.615 0.00 0.00 31.46 4.30
980 2372 8.311836 AGACAAATCTAAGACAAGTAATTCGGA 58.688 33.333 0.00 0.00 31.46 4.55
981 2373 8.842358 ACAAATCTAAGACAAGTAATTCGGAA 57.158 30.769 0.00 0.00 0.00 4.30
982 2374 8.718734 ACAAATCTAAGACAAGTAATTCGGAAC 58.281 33.333 0.00 0.00 0.00 3.62
1013 2405 3.028850 ACAATCAAATGGCATCCTCCTG 58.971 45.455 0.00 0.00 0.00 3.86
1053 2445 1.396301 GCTCTTCTTGCATTGGTCTCG 59.604 52.381 0.00 0.00 0.00 4.04
1101 2493 2.654863 CCACTCCAGGACTTTTGTGTT 58.345 47.619 5.33 0.00 0.00 3.32
1132 2524 5.754782 TGCATTCACCAGGTACTATTTCAT 58.245 37.500 0.00 0.00 36.02 2.57
1136 2531 3.714798 TCACCAGGTACTATTTCATCCCC 59.285 47.826 0.00 0.00 36.02 4.81
1164 2559 6.653020 TCCTGTCATGTTATCAGCAAATACT 58.347 36.000 0.00 0.00 0.00 2.12
1169 2564 8.344831 TGTCATGTTATCAGCAAATACTTATGC 58.655 33.333 0.00 0.00 42.87 3.14
1286 2685 4.815846 GTCAATGGGTTTGTTTGCAAGAAT 59.184 37.500 0.00 0.00 36.65 2.40
1304 2703 0.462047 ATCCGATGGAAGTCAACGCC 60.462 55.000 0.00 0.00 39.81 5.68
1336 2735 2.436292 GGCAGCTGCTCTGGACAG 60.436 66.667 35.82 0.00 43.06 3.51
1372 2771 3.424703 ACAAGGTTGGATCCAATGTCAG 58.575 45.455 29.37 19.46 38.28 3.51
1408 2807 2.089980 GCAGATTGCTGGACTCAACAT 58.910 47.619 0.00 0.00 42.53 2.71
1427 2826 1.227350 CCTCGGCATCTCAATCGCA 60.227 57.895 0.00 0.00 0.00 5.10
1430 2829 2.874694 CGGCATCTCAATCGCACGG 61.875 63.158 0.00 0.00 0.00 4.94
1472 2871 1.543802 CAAAACCCACCACATACGCAT 59.456 47.619 0.00 0.00 0.00 4.73
1493 2892 2.584418 CGCGCCACTGAGATCCTG 60.584 66.667 0.00 0.00 0.00 3.86
1530 2929 4.664688 AAAGGGCTATAGATGGAATGGG 57.335 45.455 3.21 0.00 0.00 4.00
1539 2938 5.848286 ATAGATGGAATGGGCACTAATGA 57.152 39.130 0.00 0.00 0.00 2.57
1544 2943 1.949525 GAATGGGCACTAATGACGCAT 59.050 47.619 0.00 0.00 37.22 4.73
1546 2945 0.541392 TGGGCACTAATGACGCATCT 59.459 50.000 0.00 0.00 32.81 2.90
1548 2947 1.656652 GGCACTAATGACGCATCTGT 58.343 50.000 0.00 0.00 0.00 3.41
1579 2978 3.190744 GCGCCACTACTATATAGCAGTGA 59.809 47.826 31.90 6.68 46.03 3.41
1584 2983 5.147865 CACTACTATATAGCAGTGACGCAC 58.852 45.833 28.53 2.28 46.03 5.34
1610 3009 0.668096 CACGGTGCGCCACTAGTAAA 60.668 55.000 18.18 0.00 34.40 2.01
1650 3915 2.299013 TCCGAAGATACTAATGGCGCAT 59.701 45.455 10.83 0.00 0.00 4.73
1653 3918 3.928992 CGAAGATACTAATGGCGCATCAT 59.071 43.478 10.83 0.46 0.00 2.45
1658 3923 0.669619 CTAATGGCGCATCATGGCAA 59.330 50.000 10.83 0.00 45.55 4.52
1659 3924 0.669619 TAATGGCGCATCATGGCAAG 59.330 50.000 10.83 0.00 45.55 4.01
1674 3939 0.657840 GCAAGGTGCGCCATTACTAG 59.342 55.000 20.59 0.77 37.19 2.57
1676 3941 1.665679 CAAGGTGCGCCATTACTAGTG 59.334 52.381 20.59 0.00 37.19 2.74
1697 3962 2.124903 CTAACTAGTAATGGCGCACCG 58.875 52.381 10.83 0.00 39.70 4.94
1709 3974 2.046314 GCACCGGCCACATAGTGT 60.046 61.111 0.00 0.00 32.75 3.55
1719 3984 1.280982 CACATAGTGTGCCGCTACTG 58.719 55.000 10.06 0.57 41.89 2.74
1721 3986 1.275291 ACATAGTGTGCCGCTACTGTT 59.725 47.619 10.06 0.00 28.90 3.16
1722 3987 1.660607 CATAGTGTGCCGCTACTGTTG 59.339 52.381 10.06 5.45 28.90 3.33
2297 7288 3.834056 CCCTCGCCTCCCTCCCTA 61.834 72.222 0.00 0.00 0.00 3.53
2298 7289 2.282446 CCTCGCCTCCCTCCCTAA 59.718 66.667 0.00 0.00 0.00 2.69
2299 7290 2.134933 CCTCGCCTCCCTCCCTAAC 61.135 68.421 0.00 0.00 0.00 2.34
2300 7291 2.042230 TCGCCTCCCTCCCTAACC 60.042 66.667 0.00 0.00 0.00 2.85
2301 7292 3.162154 CGCCTCCCTCCCTAACCC 61.162 72.222 0.00 0.00 0.00 4.11
2302 7293 2.373100 GCCTCCCTCCCTAACCCT 59.627 66.667 0.00 0.00 0.00 4.34
2303 7294 1.766864 GCCTCCCTCCCTAACCCTC 60.767 68.421 0.00 0.00 0.00 4.30
2304 7295 1.457831 CCTCCCTCCCTAACCCTCG 60.458 68.421 0.00 0.00 0.00 4.63
2305 7296 1.457831 CTCCCTCCCTAACCCTCGG 60.458 68.421 0.00 0.00 0.00 4.63
2306 7297 1.937528 TCCCTCCCTAACCCTCGGA 60.938 63.158 0.00 0.00 0.00 4.55
2307 7298 1.457831 CCCTCCCTAACCCTCGGAG 60.458 68.421 0.00 0.00 42.48 4.63
2308 7299 2.134933 CCTCCCTAACCCTCGGAGC 61.135 68.421 0.00 0.00 41.66 4.70
2309 7300 2.042230 TCCCTAACCCTCGGAGCC 60.042 66.667 0.00 0.00 0.00 4.70
2310 7301 3.537874 CCCTAACCCTCGGAGCCG 61.538 72.222 1.74 1.74 41.35 5.52
2311 7302 4.222847 CCTAACCCTCGGAGCCGC 62.223 72.222 3.59 0.00 39.59 6.53
2312 7303 4.222847 CTAACCCTCGGAGCCGCC 62.223 72.222 3.59 0.00 39.59 6.13
2321 7312 2.815647 GGAGCCGCCGAAGACTTG 60.816 66.667 0.00 0.00 0.00 3.16
2322 7313 2.815647 GAGCCGCCGAAGACTTGG 60.816 66.667 0.00 0.00 0.00 3.61
2323 7314 3.296709 GAGCCGCCGAAGACTTGGA 62.297 63.158 0.00 0.00 0.00 3.53
2324 7315 2.815647 GCCGCCGAAGACTTGGAG 60.816 66.667 0.00 0.36 0.00 3.86
2325 7316 2.815647 CCGCCGAAGACTTGGAGC 60.816 66.667 0.00 0.40 0.00 4.70
2326 7317 2.815647 CGCCGAAGACTTGGAGCC 60.816 66.667 0.00 0.00 0.00 4.70
2327 7318 2.665603 GCCGAAGACTTGGAGCCT 59.334 61.111 0.00 0.00 0.00 4.58
2328 7319 1.448717 GCCGAAGACTTGGAGCCTC 60.449 63.158 0.00 0.00 0.00 4.70
2329 7320 1.153745 CCGAAGACTTGGAGCCTCG 60.154 63.158 0.00 0.00 0.00 4.63
2330 7321 1.153745 CGAAGACTTGGAGCCTCGG 60.154 63.158 0.00 0.00 0.00 4.63
2331 7322 1.448717 GAAGACTTGGAGCCTCGGC 60.449 63.158 0.00 0.00 42.33 5.54
2353 7344 3.706373 CCCCACGTCCACCAGGAG 61.706 72.222 0.00 0.00 46.92 3.69
2354 7345 2.603473 CCCACGTCCACCAGGAGA 60.603 66.667 0.00 0.00 46.92 3.71
2355 7346 2.650116 CCCACGTCCACCAGGAGAG 61.650 68.421 0.00 0.00 46.92 3.20
2356 7347 2.650116 CCACGTCCACCAGGAGAGG 61.650 68.421 0.00 0.00 46.92 3.69
2357 7348 1.606601 CACGTCCACCAGGAGAGGA 60.607 63.158 0.00 0.00 46.92 3.71
2358 7349 1.304547 ACGTCCACCAGGAGAGGAG 60.305 63.158 0.00 0.00 46.92 3.69
2359 7350 2.055042 CGTCCACCAGGAGAGGAGG 61.055 68.421 0.00 0.00 46.92 4.30
2360 7351 2.039624 TCCACCAGGAGAGGAGGC 59.960 66.667 0.00 0.00 39.61 4.70
2361 7352 3.086600 CCACCAGGAGAGGAGGCC 61.087 72.222 0.00 0.00 36.89 5.19
2362 7353 3.086600 CACCAGGAGAGGAGGCCC 61.087 72.222 0.00 0.00 0.00 5.80
2363 7354 4.423209 ACCAGGAGAGGAGGCCCC 62.423 72.222 0.00 0.00 0.00 5.80
2364 7355 4.421554 CCAGGAGAGGAGGCCCCA 62.422 72.222 12.24 0.00 37.41 4.96
2365 7356 3.086600 CAGGAGAGGAGGCCCCAC 61.087 72.222 12.24 6.35 37.41 4.61
2366 7357 4.787280 AGGAGAGGAGGCCCCACG 62.787 72.222 12.24 0.00 37.41 4.94
2368 7359 3.462678 GAGAGGAGGCCCCACGTC 61.463 72.222 12.24 9.30 37.41 4.34
2377 7368 3.706373 CCCCACGTCCACCAGGAG 61.706 72.222 0.00 0.00 46.92 3.69
2378 7369 2.603473 CCCACGTCCACCAGGAGA 60.603 66.667 0.00 0.00 46.92 3.71
2379 7370 2.650116 CCCACGTCCACCAGGAGAG 61.650 68.421 0.00 0.00 46.92 3.20
2380 7371 2.650116 CCACGTCCACCAGGAGAGG 61.650 68.421 0.00 0.00 46.92 3.69
2381 7372 1.606601 CACGTCCACCAGGAGAGGA 60.607 63.158 0.00 0.00 46.92 3.71
2382 7373 1.304547 ACGTCCACCAGGAGAGGAG 60.305 63.158 0.00 0.00 46.92 3.69
2383 7374 2.055042 CGTCCACCAGGAGAGGAGG 61.055 68.421 0.00 0.00 46.92 4.30
2384 7375 2.039624 TCCACCAGGAGAGGAGGC 59.960 66.667 0.00 0.00 39.61 4.70
2385 7376 3.086600 CCACCAGGAGAGGAGGCC 61.087 72.222 0.00 0.00 36.89 5.19
2386 7377 3.086600 CACCAGGAGAGGAGGCCC 61.087 72.222 0.00 0.00 0.00 5.80
2387 7378 4.787280 ACCAGGAGAGGAGGCCCG 62.787 72.222 0.00 0.00 37.58 6.13
2406 7397 2.521224 GACCTCCCCGCCGTCTAT 60.521 66.667 0.00 0.00 0.00 1.98
2407 7398 2.521224 ACCTCCCCGCCGTCTATC 60.521 66.667 0.00 0.00 0.00 2.08
2408 7399 3.303928 CCTCCCCGCCGTCTATCC 61.304 72.222 0.00 0.00 0.00 2.59
2409 7400 3.303928 CTCCCCGCCGTCTATCCC 61.304 72.222 0.00 0.00 0.00 3.85
2410 7401 4.928140 TCCCCGCCGTCTATCCCC 62.928 72.222 0.00 0.00 0.00 4.81
2415 7406 3.992317 GCCGTCTATCCCCGCCTC 61.992 72.222 0.00 0.00 0.00 4.70
2416 7407 3.303928 CCGTCTATCCCCGCCTCC 61.304 72.222 0.00 0.00 0.00 4.30
2417 7408 3.303928 CGTCTATCCCCGCCTCCC 61.304 72.222 0.00 0.00 0.00 4.30
2418 7409 2.923568 GTCTATCCCCGCCTCCCC 60.924 72.222 0.00 0.00 0.00 4.81
2419 7410 4.250170 TCTATCCCCGCCTCCCCC 62.250 72.222 0.00 0.00 0.00 5.40
2420 7411 4.574614 CTATCCCCGCCTCCCCCA 62.575 72.222 0.00 0.00 0.00 4.96
2421 7412 4.111094 TATCCCCGCCTCCCCCAA 62.111 66.667 0.00 0.00 0.00 4.12
2429 7420 4.479993 CCTCCCCCAAGCTCGCTG 62.480 72.222 0.00 0.00 0.00 5.18
2430 7421 3.710722 CTCCCCCAAGCTCGCTGT 61.711 66.667 0.00 0.00 0.00 4.40
2431 7422 3.672295 CTCCCCCAAGCTCGCTGTC 62.672 68.421 0.00 0.00 0.00 3.51
2432 7423 3.710722 CCCCCAAGCTCGCTGTCT 61.711 66.667 0.00 0.00 0.00 3.41
2433 7424 2.125350 CCCCAAGCTCGCTGTCTC 60.125 66.667 0.00 0.00 0.00 3.36
2434 7425 2.125350 CCCAAGCTCGCTGTCTCC 60.125 66.667 0.00 0.00 0.00 3.71
2435 7426 2.507992 CCAAGCTCGCTGTCTCCG 60.508 66.667 0.00 0.00 0.00 4.63
2436 7427 3.184683 CAAGCTCGCTGTCTCCGC 61.185 66.667 0.00 0.00 0.00 5.54
2437 7428 4.443266 AAGCTCGCTGTCTCCGCC 62.443 66.667 0.00 0.00 0.00 6.13
2440 7431 4.200283 CTCGCTGTCTCCGCCCTC 62.200 72.222 0.00 0.00 0.00 4.30
2469 7460 3.402681 CTCCGGCCACCACCTCAT 61.403 66.667 2.24 0.00 0.00 2.90
2470 7461 3.391665 CTCCGGCCACCACCTCATC 62.392 68.421 2.24 0.00 0.00 2.92
2471 7462 4.838152 CCGGCCACCACCTCATCG 62.838 72.222 2.24 0.00 0.00 3.84
2472 7463 4.082523 CGGCCACCACCTCATCGT 62.083 66.667 2.24 0.00 0.00 3.73
2473 7464 2.436646 GGCCACCACCTCATCGTG 60.437 66.667 0.00 0.00 0.00 4.35
2478 7469 4.919653 CCACCTCATCGTGGTCAG 57.080 61.111 0.00 0.00 46.97 3.51
2479 7470 1.219124 CCACCTCATCGTGGTCAGG 59.781 63.158 0.00 0.00 46.97 3.86
2480 7471 1.544825 CCACCTCATCGTGGTCAGGT 61.545 60.000 0.00 0.00 46.97 4.00
2481 7472 1.182667 CACCTCATCGTGGTCAGGTA 58.817 55.000 0.00 0.00 37.13 3.08
2482 7473 1.548719 CACCTCATCGTGGTCAGGTAA 59.451 52.381 0.00 0.00 37.13 2.85
2483 7474 1.549170 ACCTCATCGTGGTCAGGTAAC 59.451 52.381 0.00 0.00 37.50 2.50
2484 7475 1.134788 CCTCATCGTGGTCAGGTAACC 60.135 57.143 0.00 0.00 39.94 2.85
2485 7476 0.899720 TCATCGTGGTCAGGTAACCC 59.100 55.000 0.00 0.00 38.65 4.11
2486 7477 0.902531 CATCGTGGTCAGGTAACCCT 59.097 55.000 0.00 0.00 44.02 4.34
2487 7478 1.134788 CATCGTGGTCAGGTAACCCTC 60.135 57.143 0.00 0.00 39.89 4.30
2488 7479 0.901580 TCGTGGTCAGGTAACCCTCC 60.902 60.000 0.00 0.00 39.89 4.30
2489 7480 0.903454 CGTGGTCAGGTAACCCTCCT 60.903 60.000 0.00 0.00 39.89 3.69
2490 7481 0.903236 GTGGTCAGGTAACCCTCCTC 59.097 60.000 0.00 0.00 39.89 3.71
2496 7487 0.340208 AGGTAACCCTCCTCCCTCTG 59.660 60.000 0.00 0.00 35.62 3.35
2500 7491 2.445654 CCCTCCTCCCTCTGCCTC 60.446 72.222 0.00 0.00 0.00 4.70
2501 7492 2.695597 CCTCCTCCCTCTGCCTCT 59.304 66.667 0.00 0.00 0.00 3.69
2511 7502 1.063717 CCTCTGCCTCTCTTCTCCTCT 60.064 57.143 0.00 0.00 0.00 3.69
2513 7504 1.922447 TCTGCCTCTCTTCTCCTCTCT 59.078 52.381 0.00 0.00 0.00 3.10
2514 7505 2.311542 TCTGCCTCTCTTCTCCTCTCTT 59.688 50.000 0.00 0.00 0.00 2.85
2516 7507 2.031870 GCCTCTCTTCTCCTCTCTTCC 58.968 57.143 0.00 0.00 0.00 3.46
2517 7508 2.358195 GCCTCTCTTCTCCTCTCTTCCT 60.358 54.545 0.00 0.00 0.00 3.36
2518 7509 3.555966 CCTCTCTTCTCCTCTCTTCCTC 58.444 54.545 0.00 0.00 0.00 3.71
2519 7510 3.555966 CTCTCTTCTCCTCTCTTCCTCC 58.444 54.545 0.00 0.00 0.00 4.30
2520 7511 3.197983 TCTCTTCTCCTCTCTTCCTCCT 58.802 50.000 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.439426 CCGGAACATCACACACTTCAAAAA 60.439 41.667 0.00 0.00 0.00 1.94
31 32 3.066064 CCGGAACATCACACACTTCAAAA 59.934 43.478 0.00 0.00 0.00 2.44
32 33 2.616376 CCGGAACATCACACACTTCAAA 59.384 45.455 0.00 0.00 0.00 2.69
33 34 2.217750 CCGGAACATCACACACTTCAA 58.782 47.619 0.00 0.00 0.00 2.69
34 35 1.140052 ACCGGAACATCACACACTTCA 59.860 47.619 9.46 0.00 0.00 3.02
35 36 1.878953 ACCGGAACATCACACACTTC 58.121 50.000 9.46 0.00 0.00 3.01
36 37 3.135994 GTTACCGGAACATCACACACTT 58.864 45.455 9.46 0.00 38.02 3.16
37 38 2.367567 AGTTACCGGAACATCACACACT 59.632 45.455 9.46 0.00 40.86 3.55
38 39 2.762745 AGTTACCGGAACATCACACAC 58.237 47.619 9.46 0.00 40.86 3.82
39 40 3.478857 AAGTTACCGGAACATCACACA 57.521 42.857 9.46 0.00 40.86 3.72
40 41 3.370061 GCTAAGTTACCGGAACATCACAC 59.630 47.826 9.46 0.00 40.86 3.82
41 42 3.259876 AGCTAAGTTACCGGAACATCACA 59.740 43.478 9.46 0.00 40.86 3.58
42 43 3.858247 AGCTAAGTTACCGGAACATCAC 58.142 45.455 9.46 0.66 40.86 3.06
43 44 4.708421 ACTAGCTAAGTTACCGGAACATCA 59.292 41.667 9.46 0.00 40.86 3.07
44 45 5.259832 ACTAGCTAAGTTACCGGAACATC 57.740 43.478 9.46 0.00 40.86 3.06
45 46 5.672421 AACTAGCTAAGTTACCGGAACAT 57.328 39.130 9.46 4.03 46.85 2.71
62 63 3.511934 AGAGAGGTGCTTGTGGTAACTAG 59.488 47.826 0.00 0.00 37.61 2.57
63 64 3.507411 AGAGAGGTGCTTGTGGTAACTA 58.493 45.455 0.00 0.00 37.61 2.24
64 65 2.300437 GAGAGAGGTGCTTGTGGTAACT 59.700 50.000 0.00 0.00 37.61 2.24
65 66 2.300437 AGAGAGAGGTGCTTGTGGTAAC 59.700 50.000 0.00 0.00 0.00 2.50
66 67 2.609747 AGAGAGAGGTGCTTGTGGTAA 58.390 47.619 0.00 0.00 0.00 2.85
67 68 2.310779 AGAGAGAGGTGCTTGTGGTA 57.689 50.000 0.00 0.00 0.00 3.25
68 69 1.346068 GAAGAGAGAGGTGCTTGTGGT 59.654 52.381 0.00 0.00 0.00 4.16
69 70 1.345741 TGAAGAGAGAGGTGCTTGTGG 59.654 52.381 0.00 0.00 0.00 4.17
70 71 2.827800 TGAAGAGAGAGGTGCTTGTG 57.172 50.000 0.00 0.00 0.00 3.33
71 72 5.489792 TTAATGAAGAGAGAGGTGCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
72 73 6.998968 ATTTAATGAAGAGAGAGGTGCTTG 57.001 37.500 0.00 0.00 0.00 4.01
73 74 8.270744 ACATATTTAATGAAGAGAGAGGTGCTT 58.729 33.333 0.00 0.00 0.00 3.91
74 75 7.714377 CACATATTTAATGAAGAGAGAGGTGCT 59.286 37.037 0.00 0.00 0.00 4.40
75 76 7.519649 GCACATATTTAATGAAGAGAGAGGTGC 60.520 40.741 0.00 0.00 37.76 5.01
76 77 7.041508 GGCACATATTTAATGAAGAGAGAGGTG 60.042 40.741 0.00 0.00 0.00 4.00
77 78 6.995091 GGCACATATTTAATGAAGAGAGAGGT 59.005 38.462 0.00 0.00 0.00 3.85
78 79 6.994496 TGGCACATATTTAATGAAGAGAGAGG 59.006 38.462 0.00 0.00 0.00 3.69
79 80 7.496920 TGTGGCACATATTTAATGAAGAGAGAG 59.503 37.037 17.96 0.00 44.52 3.20
80 81 7.337938 TGTGGCACATATTTAATGAAGAGAGA 58.662 34.615 17.96 0.00 44.52 3.10
81 82 7.558161 TGTGGCACATATTTAATGAAGAGAG 57.442 36.000 17.96 0.00 44.52 3.20
82 83 9.625747 TTATGTGGCACATATTTAATGAAGAGA 57.374 29.630 33.89 16.11 44.52 3.10
83 84 9.888878 CTTATGTGGCACATATTTAATGAAGAG 57.111 33.333 33.89 22.09 44.52 2.85
84 85 9.625747 TCTTATGTGGCACATATTTAATGAAGA 57.374 29.630 33.89 28.32 44.52 2.87
91 92 9.853555 CAACTTTTCTTATGTGGCACATATTTA 57.146 29.630 33.89 21.55 44.52 1.40
92 93 8.367156 ACAACTTTTCTTATGTGGCACATATTT 58.633 29.630 33.89 17.52 44.52 1.40
93 94 7.895759 ACAACTTTTCTTATGTGGCACATATT 58.104 30.769 33.89 22.58 44.52 1.28
94 95 7.466746 ACAACTTTTCTTATGTGGCACATAT 57.533 32.000 33.89 18.57 44.52 1.78
95 96 6.892658 ACAACTTTTCTTATGTGGCACATA 57.107 33.333 31.06 31.06 44.52 2.29
96 97 5.789643 ACAACTTTTCTTATGTGGCACAT 57.210 34.783 33.18 33.18 44.52 3.21
97 98 6.892658 ATACAACTTTTCTTATGTGGCACA 57.107 33.333 24.36 24.36 0.00 4.57
98 99 6.586082 CCAATACAACTTTTCTTATGTGGCAC 59.414 38.462 11.55 11.55 0.00 5.01
99 100 6.491745 TCCAATACAACTTTTCTTATGTGGCA 59.508 34.615 0.00 0.00 0.00 4.92
100 101 6.919721 TCCAATACAACTTTTCTTATGTGGC 58.080 36.000 0.00 0.00 0.00 5.01
101 102 8.110860 ACTCCAATACAACTTTTCTTATGTGG 57.889 34.615 0.00 0.00 0.00 4.17
107 108 8.918202 TCACATACTCCAATACAACTTTTCTT 57.082 30.769 0.00 0.00 0.00 2.52
108 109 8.950210 CATCACATACTCCAATACAACTTTTCT 58.050 33.333 0.00 0.00 0.00 2.52
109 110 8.730680 ACATCACATACTCCAATACAACTTTTC 58.269 33.333 0.00 0.00 0.00 2.29
110 111 8.635765 ACATCACATACTCCAATACAACTTTT 57.364 30.769 0.00 0.00 0.00 2.27
111 112 8.635765 AACATCACATACTCCAATACAACTTT 57.364 30.769 0.00 0.00 0.00 2.66
112 113 9.162764 GTAACATCACATACTCCAATACAACTT 57.837 33.333 0.00 0.00 0.00 2.66
113 114 8.540388 AGTAACATCACATACTCCAATACAACT 58.460 33.333 0.00 0.00 0.00 3.16
114 115 8.718102 AGTAACATCACATACTCCAATACAAC 57.282 34.615 0.00 0.00 0.00 3.32
115 116 8.942338 GAGTAACATCACATACTCCAATACAA 57.058 34.615 2.30 0.00 41.29 2.41
123 124 7.907214 AACTTTGGAGTAACATCACATACTC 57.093 36.000 4.72 4.72 44.66 2.59
124 125 8.594550 AGTAACTTTGGAGTAACATCACATACT 58.405 33.333 0.00 0.00 34.21 2.12
125 126 8.773404 AGTAACTTTGGAGTAACATCACATAC 57.227 34.615 0.00 0.00 34.21 2.39
126 127 8.038944 GGAGTAACTTTGGAGTAACATCACATA 58.961 37.037 0.00 0.00 34.21 2.29
127 128 6.879458 GGAGTAACTTTGGAGTAACATCACAT 59.121 38.462 0.00 0.00 34.21 3.21
128 129 6.228258 GGAGTAACTTTGGAGTAACATCACA 58.772 40.000 0.00 0.00 34.21 3.58
129 130 5.642491 GGGAGTAACTTTGGAGTAACATCAC 59.358 44.000 0.00 0.00 34.21 3.06
130 131 5.280317 GGGGAGTAACTTTGGAGTAACATCA 60.280 44.000 0.00 0.00 34.21 3.07
131 132 5.183969 GGGGAGTAACTTTGGAGTAACATC 58.816 45.833 0.00 0.00 34.21 3.06
132 133 4.600111 TGGGGAGTAACTTTGGAGTAACAT 59.400 41.667 0.00 0.00 34.21 2.71
133 134 3.975312 TGGGGAGTAACTTTGGAGTAACA 59.025 43.478 0.00 0.00 34.21 2.41
134 135 4.041321 AGTGGGGAGTAACTTTGGAGTAAC 59.959 45.833 0.00 0.00 34.21 2.50
135 136 4.041198 CAGTGGGGAGTAACTTTGGAGTAA 59.959 45.833 0.00 0.00 34.21 2.24
136 137 3.581332 CAGTGGGGAGTAACTTTGGAGTA 59.419 47.826 0.00 0.00 34.21 2.59
137 138 2.372172 CAGTGGGGAGTAACTTTGGAGT 59.628 50.000 0.00 0.00 37.87 3.85
138 139 2.372172 ACAGTGGGGAGTAACTTTGGAG 59.628 50.000 0.00 0.00 0.00 3.86
139 140 2.105821 CACAGTGGGGAGTAACTTTGGA 59.894 50.000 0.00 0.00 0.00 3.53
140 141 2.105821 TCACAGTGGGGAGTAACTTTGG 59.894 50.000 0.00 0.00 0.00 3.28
141 142 3.139077 GTCACAGTGGGGAGTAACTTTG 58.861 50.000 0.00 0.00 0.00 2.77
142 143 2.105993 GGTCACAGTGGGGAGTAACTTT 59.894 50.000 0.00 0.00 0.00 2.66
143 144 1.697982 GGTCACAGTGGGGAGTAACTT 59.302 52.381 0.00 0.00 0.00 2.66
144 145 1.349067 GGTCACAGTGGGGAGTAACT 58.651 55.000 0.00 0.00 0.00 2.24
145 146 1.002087 CTGGTCACAGTGGGGAGTAAC 59.998 57.143 0.00 0.00 39.92 2.50
146 147 1.348064 CTGGTCACAGTGGGGAGTAA 58.652 55.000 0.00 0.00 39.92 2.24
147 148 1.192146 GCTGGTCACAGTGGGGAGTA 61.192 60.000 0.00 0.00 46.62 2.59
148 149 2.520536 GCTGGTCACAGTGGGGAGT 61.521 63.158 0.00 0.00 46.62 3.85
149 150 2.348998 GCTGGTCACAGTGGGGAG 59.651 66.667 0.00 0.00 46.62 4.30
150 151 2.395180 TAGGCTGGTCACAGTGGGGA 62.395 60.000 0.00 0.00 46.62 4.81
151 152 1.488705 TTAGGCTGGTCACAGTGGGG 61.489 60.000 0.00 0.00 46.62 4.96
152 153 0.620556 ATTAGGCTGGTCACAGTGGG 59.379 55.000 0.00 0.00 46.62 4.61
153 154 3.845781 ATATTAGGCTGGTCACAGTGG 57.154 47.619 0.00 0.00 46.62 4.00
154 155 7.807977 AAAATATATTAGGCTGGTCACAGTG 57.192 36.000 0.00 0.00 46.62 3.66
176 177 4.569162 GTCATCGTCCGGTGATATCAAAAA 59.431 41.667 7.07 0.00 0.00 1.94
177 178 4.116961 GTCATCGTCCGGTGATATCAAAA 58.883 43.478 7.07 0.00 0.00 2.44
178 179 3.383505 AGTCATCGTCCGGTGATATCAAA 59.616 43.478 7.07 0.00 0.00 2.69
179 180 2.956333 AGTCATCGTCCGGTGATATCAA 59.044 45.455 7.07 0.00 0.00 2.57
180 181 2.552743 GAGTCATCGTCCGGTGATATCA 59.447 50.000 5.87 0.00 0.00 2.15
181 182 2.412977 CGAGTCATCGTCCGGTGATATC 60.413 54.545 5.87 6.93 44.09 1.63
182 183 1.535896 CGAGTCATCGTCCGGTGATAT 59.464 52.381 5.87 0.00 44.09 1.63
183 184 0.942252 CGAGTCATCGTCCGGTGATA 59.058 55.000 5.87 0.00 44.09 2.15
184 185 1.728069 CGAGTCATCGTCCGGTGAT 59.272 57.895 5.87 3.44 44.09 3.06
185 186 3.184206 CGAGTCATCGTCCGGTGA 58.816 61.111 0.00 0.00 44.09 4.02
194 195 4.058817 AGAACTTTGGAACACGAGTCATC 58.941 43.478 0.00 0.00 39.29 2.92
195 196 3.809832 CAGAACTTTGGAACACGAGTCAT 59.190 43.478 0.00 0.00 39.29 3.06
196 197 3.194861 CAGAACTTTGGAACACGAGTCA 58.805 45.455 0.00 0.00 39.29 3.41
197 198 2.032808 GCAGAACTTTGGAACACGAGTC 60.033 50.000 0.00 0.00 39.29 3.36
198 199 1.940613 GCAGAACTTTGGAACACGAGT 59.059 47.619 0.00 0.00 39.29 4.18
199 200 1.264288 GGCAGAACTTTGGAACACGAG 59.736 52.381 0.00 0.00 39.29 4.18
200 201 1.305201 GGCAGAACTTTGGAACACGA 58.695 50.000 0.00 0.00 39.29 4.35
201 202 0.310854 GGGCAGAACTTTGGAACACG 59.689 55.000 0.00 0.00 39.29 4.49
202 203 1.692411 AGGGCAGAACTTTGGAACAC 58.308 50.000 0.00 0.00 39.29 3.32
203 204 2.031120 CAAGGGCAGAACTTTGGAACA 58.969 47.619 0.00 0.00 0.00 3.18
204 205 2.306847 TCAAGGGCAGAACTTTGGAAC 58.693 47.619 0.00 0.00 0.00 3.62
205 206 2.746279 TCAAGGGCAGAACTTTGGAA 57.254 45.000 0.00 0.00 0.00 3.53
206 207 2.978156 ATCAAGGGCAGAACTTTGGA 57.022 45.000 0.00 0.00 0.00 3.53
207 208 4.060205 CAAAATCAAGGGCAGAACTTTGG 58.940 43.478 0.00 0.00 0.00 3.28
208 209 4.060205 CCAAAATCAAGGGCAGAACTTTG 58.940 43.478 0.00 0.00 0.00 2.77
209 210 3.966665 TCCAAAATCAAGGGCAGAACTTT 59.033 39.130 0.00 0.00 0.00 2.66
210 211 3.575687 CTCCAAAATCAAGGGCAGAACTT 59.424 43.478 0.00 0.00 0.00 2.66
211 212 3.160269 CTCCAAAATCAAGGGCAGAACT 58.840 45.455 0.00 0.00 0.00 3.01
212 213 2.232208 CCTCCAAAATCAAGGGCAGAAC 59.768 50.000 0.00 0.00 0.00 3.01
213 214 2.109834 TCCTCCAAAATCAAGGGCAGAA 59.890 45.455 0.00 0.00 0.00 3.02
214 215 1.710244 TCCTCCAAAATCAAGGGCAGA 59.290 47.619 0.00 0.00 0.00 4.26
215 216 2.220653 TCCTCCAAAATCAAGGGCAG 57.779 50.000 0.00 0.00 0.00 4.85
216 217 2.459644 CATCCTCCAAAATCAAGGGCA 58.540 47.619 0.00 0.00 0.00 5.36
217 218 1.758862 CCATCCTCCAAAATCAAGGGC 59.241 52.381 0.00 0.00 0.00 5.19
218 219 1.758862 GCCATCCTCCAAAATCAAGGG 59.241 52.381 0.00 0.00 0.00 3.95
219 220 2.459644 TGCCATCCTCCAAAATCAAGG 58.540 47.619 0.00 0.00 0.00 3.61
220 221 3.702548 TCATGCCATCCTCCAAAATCAAG 59.297 43.478 0.00 0.00 0.00 3.02
221 222 3.710724 TCATGCCATCCTCCAAAATCAA 58.289 40.909 0.00 0.00 0.00 2.57
222 223 3.385314 TCATGCCATCCTCCAAAATCA 57.615 42.857 0.00 0.00 0.00 2.57
223 224 4.950205 AATCATGCCATCCTCCAAAATC 57.050 40.909 0.00 0.00 0.00 2.17
224 225 5.703730 AAAATCATGCCATCCTCCAAAAT 57.296 34.783 0.00 0.00 0.00 1.82
225 226 5.502089 AAAAATCATGCCATCCTCCAAAA 57.498 34.783 0.00 0.00 0.00 2.44
373 408 5.504173 GCAATTGTTTTCTATACCTCGAGGC 60.504 44.000 31.56 11.98 39.32 4.70
384 419 9.462174 CAAGTGATGTAAAGCAATTGTTTTCTA 57.538 29.630 21.56 13.19 35.91 2.10
392 427 5.473066 AAGCCAAGTGATGTAAAGCAATT 57.527 34.783 0.00 0.00 0.00 2.32
451 486 1.011333 ACTTGGTCGTGGTGAAAACG 58.989 50.000 0.00 0.00 42.36 3.60
462 497 3.381045 ACACGCATCATATACTTGGTCG 58.619 45.455 0.00 0.00 0.00 4.79
478 513 1.262151 TCGCTTTGGTTTCTAACACGC 59.738 47.619 0.00 0.00 0.00 5.34
483 521 3.811083 TCCAACTCGCTTTGGTTTCTAA 58.189 40.909 12.89 0.00 45.60 2.10
535 575 1.115326 AGGCCTGGTTCCAGCAAAAC 61.115 55.000 3.11 1.93 33.07 2.43
551 591 0.674581 TAGTCACAGTGCATGCAGGC 60.675 55.000 23.41 18.05 0.00 4.85
562 602 2.501316 TCACCCATCACCATAGTCACAG 59.499 50.000 0.00 0.00 0.00 3.66
567 607 2.707791 CCATCTCACCCATCACCATAGT 59.292 50.000 0.00 0.00 0.00 2.12
570 610 1.897473 TCCATCTCACCCATCACCAT 58.103 50.000 0.00 0.00 0.00 3.55
571 611 1.897473 ATCCATCTCACCCATCACCA 58.103 50.000 0.00 0.00 0.00 4.17
572 612 4.437682 TTTATCCATCTCACCCATCACC 57.562 45.455 0.00 0.00 0.00 4.02
573 613 6.773638 AGTATTTATCCATCTCACCCATCAC 58.226 40.000 0.00 0.00 0.00 3.06
574 614 6.558394 TGAGTATTTATCCATCTCACCCATCA 59.442 38.462 0.00 0.00 31.51 3.07
575 615 7.009179 TGAGTATTTATCCATCTCACCCATC 57.991 40.000 0.00 0.00 31.51 3.51
576 616 7.579940 ATGAGTATTTATCCATCTCACCCAT 57.420 36.000 0.00 0.00 37.85 4.00
596 636 4.681942 GCACGGCTGAGTAGTAATTATGAG 59.318 45.833 0.00 0.00 0.00 2.90
634 675 4.773013 TCCCTTTTAATACGCCTAAGGTG 58.227 43.478 0.00 0.00 39.41 4.00
636 677 5.434408 AGTTCCCTTTTAATACGCCTAAGG 58.566 41.667 0.00 0.00 36.07 2.69
691 734 1.137086 CGGATCGAAATGGTCTCTGGT 59.863 52.381 0.00 0.00 0.00 4.00
706 2090 1.134788 ACTGGAATCGACCAACGGATC 60.135 52.381 0.00 0.00 42.82 3.36
754 2141 1.026584 TATAGGCGCAACGAGCTGTA 58.973 50.000 10.83 0.00 42.61 2.74
757 2146 2.927014 GCTTATATAGGCGCAACGAGCT 60.927 50.000 10.83 0.00 42.61 4.09
803 2195 2.824936 TGTTTGTGGCATAAGTGATGGG 59.175 45.455 0.00 0.00 35.91 4.00
814 2206 3.243873 TGTTTCTGTTTGTGTTTGTGGCA 60.244 39.130 0.00 0.00 0.00 4.92
842 2234 9.827411 GTAATAGTTTAGTTGGCTCTTCTTTTG 57.173 33.333 0.00 0.00 0.00 2.44
857 2249 5.975939 CGAAACGGAGGGAGTAATAGTTTAG 59.024 44.000 0.00 0.00 31.57 1.85
858 2250 5.652014 TCGAAACGGAGGGAGTAATAGTTTA 59.348 40.000 0.00 0.00 31.57 2.01
865 2257 3.967332 AATTCGAAACGGAGGGAGTAA 57.033 42.857 0.00 0.00 0.00 2.24
866 2258 4.019174 AGTAATTCGAAACGGAGGGAGTA 58.981 43.478 0.00 0.00 0.00 2.59
868 2260 3.521947 AGTAATTCGAAACGGAGGGAG 57.478 47.619 0.00 0.00 0.00 4.30
869 2261 3.007182 ACAAGTAATTCGAAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
870 2262 3.332034 ACAAGTAATTCGAAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
871 2263 4.243270 AGACAAGTAATTCGAAACGGAGG 58.757 43.478 0.00 0.00 0.00 4.30
872 2264 5.389516 CCAAGACAAGTAATTCGAAACGGAG 60.390 44.000 0.00 0.00 0.00 4.63
873 2265 4.449743 CCAAGACAAGTAATTCGAAACGGA 59.550 41.667 0.00 0.00 0.00 4.69
874 2266 4.449743 TCCAAGACAAGTAATTCGAAACGG 59.550 41.667 0.00 0.00 0.00 4.44
875 2267 5.585500 TCCAAGACAAGTAATTCGAAACG 57.415 39.130 0.00 0.00 0.00 3.60
877 2269 7.936584 ACAAATCCAAGACAAGTAATTCGAAA 58.063 30.769 0.00 0.00 0.00 3.46
878 2270 7.444183 AGACAAATCCAAGACAAGTAATTCGAA 59.556 33.333 0.00 0.00 0.00 3.71
879 2271 6.934645 AGACAAATCCAAGACAAGTAATTCGA 59.065 34.615 0.00 0.00 0.00 3.71
880 2272 7.133891 AGACAAATCCAAGACAAGTAATTCG 57.866 36.000 0.00 0.00 0.00 3.34
881 2273 9.436957 TCTAGACAAATCCAAGACAAGTAATTC 57.563 33.333 0.00 0.00 0.00 2.17
882 2274 9.965902 ATCTAGACAAATCCAAGACAAGTAATT 57.034 29.630 0.00 0.00 0.00 1.40
884 2276 9.871238 GTATCTAGACAAATCCAAGACAAGTAA 57.129 33.333 0.00 0.00 0.00 2.24
885 2277 8.188799 CGTATCTAGACAAATCCAAGACAAGTA 58.811 37.037 0.00 0.00 0.00 2.24
886 2278 7.036220 CGTATCTAGACAAATCCAAGACAAGT 58.964 38.462 0.00 0.00 0.00 3.16
887 2279 6.477033 CCGTATCTAGACAAATCCAAGACAAG 59.523 42.308 0.00 0.00 0.00 3.16
888 2280 6.153851 TCCGTATCTAGACAAATCCAAGACAA 59.846 38.462 0.00 0.00 0.00 3.18
889 2281 5.655090 TCCGTATCTAGACAAATCCAAGACA 59.345 40.000 0.00 0.00 0.00 3.41
891 2283 6.323996 ACATCCGTATCTAGACAAATCCAAGA 59.676 38.462 0.00 0.00 0.00 3.02
892 2284 6.516718 ACATCCGTATCTAGACAAATCCAAG 58.483 40.000 0.00 0.00 0.00 3.61
893 2285 6.479972 ACATCCGTATCTAGACAAATCCAA 57.520 37.500 0.00 0.00 0.00 3.53
894 2286 7.776618 ATACATCCGTATCTAGACAAATCCA 57.223 36.000 0.00 0.00 32.66 3.41
908 2300 9.570468 ACTAAAATGAGTCTAGATACATCCGTA 57.430 33.333 12.66 6.93 0.00 4.02
910 2302 8.353684 ACACTAAAATGAGTCTAGATACATCCG 58.646 37.037 12.66 6.68 0.00 4.18
922 2314 8.969267 CGGATGTATCTAACACTAAAATGAGTC 58.031 37.037 0.00 0.00 42.09 3.36
923 2315 8.475639 ACGGATGTATCTAACACTAAAATGAGT 58.524 33.333 0.00 0.00 42.09 3.41
924 2316 8.873215 ACGGATGTATCTAACACTAAAATGAG 57.127 34.615 0.00 0.00 42.09 2.90
941 2333 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
942 2334 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
943 2335 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
944 2336 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
945 2337 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
946 2338 8.407064 ACTTGTCTTAGATTTGTCTAGATACGG 58.593 37.037 0.00 0.00 0.00 4.02
953 2345 9.582431 CCGAATTACTTGTCTTAGATTTGTCTA 57.418 33.333 0.00 0.00 0.00 2.59
954 2346 8.311836 TCCGAATTACTTGTCTTAGATTTGTCT 58.688 33.333 0.00 0.00 0.00 3.41
955 2347 8.475331 TCCGAATTACTTGTCTTAGATTTGTC 57.525 34.615 0.00 0.00 0.00 3.18
956 2348 8.718734 GTTCCGAATTACTTGTCTTAGATTTGT 58.281 33.333 0.00 0.00 0.00 2.83
957 2349 7.898309 CGTTCCGAATTACTTGTCTTAGATTTG 59.102 37.037 0.00 0.00 0.00 2.32
958 2350 7.816031 TCGTTCCGAATTACTTGTCTTAGATTT 59.184 33.333 0.00 0.00 31.06 2.17
959 2351 7.318141 TCGTTCCGAATTACTTGTCTTAGATT 58.682 34.615 0.00 0.00 31.06 2.40
960 2352 6.860080 TCGTTCCGAATTACTTGTCTTAGAT 58.140 36.000 0.00 0.00 31.06 1.98
961 2353 6.258230 TCGTTCCGAATTACTTGTCTTAGA 57.742 37.500 0.00 0.00 31.06 2.10
962 2354 6.805271 TCTTCGTTCCGAATTACTTGTCTTAG 59.195 38.462 0.00 0.00 44.85 2.18
963 2355 6.680810 TCTTCGTTCCGAATTACTTGTCTTA 58.319 36.000 0.00 0.00 44.85 2.10
964 2356 5.535333 TCTTCGTTCCGAATTACTTGTCTT 58.465 37.500 0.00 0.00 44.85 3.01
965 2357 5.048224 TCTCTTCGTTCCGAATTACTTGTCT 60.048 40.000 0.00 0.00 44.85 3.41
966 2358 5.159209 TCTCTTCGTTCCGAATTACTTGTC 58.841 41.667 0.00 0.00 44.85 3.18
967 2359 5.130292 TCTCTTCGTTCCGAATTACTTGT 57.870 39.130 0.00 0.00 44.85 3.16
968 2360 5.162075 ACTCTCTTCGTTCCGAATTACTTG 58.838 41.667 0.00 0.00 44.85 3.16
969 2361 5.388408 ACTCTCTTCGTTCCGAATTACTT 57.612 39.130 0.00 0.00 44.85 2.24
970 2362 5.413833 TGTACTCTCTTCGTTCCGAATTACT 59.586 40.000 0.00 0.00 44.85 2.24
971 2363 5.634896 TGTACTCTCTTCGTTCCGAATTAC 58.365 41.667 0.00 0.00 44.85 1.89
972 2364 5.885230 TGTACTCTCTTCGTTCCGAATTA 57.115 39.130 0.00 0.00 44.85 1.40
973 2365 4.778534 TGTACTCTCTTCGTTCCGAATT 57.221 40.909 0.00 0.00 44.85 2.17
974 2366 4.778534 TTGTACTCTCTTCGTTCCGAAT 57.221 40.909 0.00 0.00 44.85 3.34
975 2367 4.216902 TGATTGTACTCTCTTCGTTCCGAA 59.783 41.667 0.00 0.00 43.75 4.30
976 2368 3.754850 TGATTGTACTCTCTTCGTTCCGA 59.245 43.478 0.00 0.00 0.00 4.55
977 2369 4.092771 TGATTGTACTCTCTTCGTTCCG 57.907 45.455 0.00 0.00 0.00 4.30
978 2370 6.183360 CCATTTGATTGTACTCTCTTCGTTCC 60.183 42.308 0.00 0.00 0.00 3.62
979 2371 6.673316 GCCATTTGATTGTACTCTCTTCGTTC 60.673 42.308 0.00 0.00 0.00 3.95
980 2372 5.122396 GCCATTTGATTGTACTCTCTTCGTT 59.878 40.000 0.00 0.00 0.00 3.85
981 2373 4.631813 GCCATTTGATTGTACTCTCTTCGT 59.368 41.667 0.00 0.00 0.00 3.85
982 2374 4.631377 TGCCATTTGATTGTACTCTCTTCG 59.369 41.667 0.00 0.00 0.00 3.79
983 2375 6.238593 GGATGCCATTTGATTGTACTCTCTTC 60.239 42.308 0.00 0.00 0.00 2.87
984 2376 5.591877 GGATGCCATTTGATTGTACTCTCTT 59.408 40.000 0.00 0.00 0.00 2.85
985 2377 5.104193 AGGATGCCATTTGATTGTACTCTCT 60.104 40.000 0.00 0.00 0.00 3.10
986 2378 5.128919 AGGATGCCATTTGATTGTACTCTC 58.871 41.667 0.00 0.00 0.00 3.20
987 2379 5.121380 AGGATGCCATTTGATTGTACTCT 57.879 39.130 0.00 0.00 0.00 3.24
988 2380 4.276926 GGAGGATGCCATTTGATTGTACTC 59.723 45.833 0.00 0.00 0.00 2.59
989 2381 4.079558 AGGAGGATGCCATTTGATTGTACT 60.080 41.667 0.00 0.00 0.00 2.73
990 2382 4.037208 CAGGAGGATGCCATTTGATTGTAC 59.963 45.833 0.00 0.00 0.00 2.90
1013 2405 1.827681 GGCAAGGAGAAGGAAGGAAC 58.172 55.000 0.00 0.00 0.00 3.62
1132 2524 0.768622 AACATGACAGGAAACGGGGA 59.231 50.000 0.00 0.00 0.00 4.81
1136 2531 3.684305 TGCTGATAACATGACAGGAAACG 59.316 43.478 0.00 0.00 33.00 3.60
1206 2601 9.136952 TGTAAGCTTAGATCTTACGAAGTTTTC 57.863 33.333 6.38 1.79 45.31 2.29
1207 2602 9.654663 ATGTAAGCTTAGATCTTACGAAGTTTT 57.345 29.630 10.22 1.09 45.31 2.43
1208 2603 9.088512 CATGTAAGCTTAGATCTTACGAAGTTT 57.911 33.333 12.93 5.46 45.31 2.66
1214 2609 8.136165 AGGTAACATGTAAGCTTAGATCTTACG 58.864 37.037 23.31 12.87 43.17 3.18
1286 2685 1.079405 GGCGTTGACTTCCATCGGA 60.079 57.895 0.00 0.00 38.16 4.55
1304 2703 1.396301 GCTGCCTTGAAGAAGTCATCG 59.604 52.381 0.00 0.00 35.70 3.84
1325 2724 1.687146 CCTAGGCCTGTCCAGAGCA 60.687 63.158 17.99 0.00 37.29 4.26
1336 2735 0.322546 CTTGTTGGTCACCCTAGGCC 60.323 60.000 2.05 0.00 0.00 5.19
1372 2771 4.569761 ATCTGCATGACATTGATCAAGC 57.430 40.909 14.54 10.82 42.33 4.01
1408 2807 1.068083 GCGATTGAGATGCCGAGGA 59.932 57.895 0.00 0.00 0.00 3.71
1427 2826 0.178987 AGGGAGCATAGTCGATCCGT 60.179 55.000 0.00 0.00 42.62 4.69
1450 2849 1.335506 GCGTATGTGGTGGGTTTTGTG 60.336 52.381 0.00 0.00 0.00 3.33
1472 2871 2.755876 ATCTCAGTGGCGCGAGGA 60.756 61.111 12.10 0.00 0.00 3.71
1493 2892 2.418334 CCCTTTTCCTAGTAGTGCCGTC 60.418 54.545 0.00 0.00 0.00 4.79
1530 2929 2.270923 TGACAGATGCGTCATTAGTGC 58.729 47.619 8.99 0.00 40.94 4.40
1539 2938 1.300971 GCACCACATGACAGATGCGT 61.301 55.000 0.00 0.00 0.00 5.24
1544 2943 2.358615 GGCGCACCACATGACAGA 60.359 61.111 10.83 0.00 35.26 3.41
1593 2992 1.149987 TTTTTACTAGTGGCGCACCG 58.850 50.000 10.83 2.80 39.70 4.94
1622 3887 7.510630 CGCCATTAGTATCTTCGGAAAATAAG 58.489 38.462 0.00 0.00 0.00 1.73
1623 3888 6.073440 GCGCCATTAGTATCTTCGGAAAATAA 60.073 38.462 0.00 0.00 0.00 1.40
1625 3890 4.213482 GCGCCATTAGTATCTTCGGAAAAT 59.787 41.667 0.00 0.00 0.00 1.82
1632 3897 4.093998 CCATGATGCGCCATTAGTATCTTC 59.906 45.833 4.18 0.00 32.96 2.87
1635 3900 2.096496 GCCATGATGCGCCATTAGTATC 59.904 50.000 4.18 0.00 0.00 2.24
1658 3923 0.462047 GCACTAGTAATGGCGCACCT 60.462 55.000 10.83 0.00 36.63 4.00
1659 3924 0.462047 AGCACTAGTAATGGCGCACC 60.462 55.000 10.83 0.00 0.00 5.01
1674 3939 2.284417 GTGCGCCATTACTAGTTAGCAC 59.716 50.000 4.18 10.42 45.03 4.40
1676 3941 1.865340 GGTGCGCCATTACTAGTTAGC 59.135 52.381 12.58 0.00 34.09 3.09
1701 3966 0.895530 ACAGTAGCGGCACACTATGT 59.104 50.000 1.45 0.00 0.00 2.29
2280 7271 3.390671 TTAGGGAGGGAGGCGAGGG 62.391 68.421 0.00 0.00 0.00 4.30
2281 7272 2.134933 GTTAGGGAGGGAGGCGAGG 61.135 68.421 0.00 0.00 0.00 4.63
2282 7273 2.134933 GGTTAGGGAGGGAGGCGAG 61.135 68.421 0.00 0.00 0.00 5.03
2283 7274 2.042230 GGTTAGGGAGGGAGGCGA 60.042 66.667 0.00 0.00 0.00 5.54
2284 7275 3.162154 GGGTTAGGGAGGGAGGCG 61.162 72.222 0.00 0.00 0.00 5.52
2285 7276 1.766864 GAGGGTTAGGGAGGGAGGC 60.767 68.421 0.00 0.00 0.00 4.70
2286 7277 1.457831 CGAGGGTTAGGGAGGGAGG 60.458 68.421 0.00 0.00 0.00 4.30
2287 7278 1.457831 CCGAGGGTTAGGGAGGGAG 60.458 68.421 0.00 0.00 0.00 4.30
2288 7279 1.937528 TCCGAGGGTTAGGGAGGGA 60.938 63.158 0.00 0.00 0.00 4.20
2289 7280 1.457831 CTCCGAGGGTTAGGGAGGG 60.458 68.421 0.00 0.00 42.91 4.30
2290 7281 2.134933 GCTCCGAGGGTTAGGGAGG 61.135 68.421 8.27 0.00 45.97 4.30
2292 7283 2.042230 GGCTCCGAGGGTTAGGGA 60.042 66.667 0.00 0.00 0.00 4.20
2293 7284 3.537874 CGGCTCCGAGGGTTAGGG 61.538 72.222 1.35 0.00 42.83 3.53
2294 7285 4.222847 GCGGCTCCGAGGGTTAGG 62.223 72.222 13.11 0.00 42.83 2.69
2295 7286 4.222847 GGCGGCTCCGAGGGTTAG 62.223 72.222 13.11 0.00 42.83 2.34
2304 7295 2.815647 CAAGTCTTCGGCGGCTCC 60.816 66.667 7.21 0.00 0.00 4.70
2305 7296 2.815647 CCAAGTCTTCGGCGGCTC 60.816 66.667 7.21 0.00 0.00 4.70
2306 7297 3.302347 CTCCAAGTCTTCGGCGGCT 62.302 63.158 7.21 0.00 0.00 5.52
2307 7298 2.815647 CTCCAAGTCTTCGGCGGC 60.816 66.667 7.21 0.00 0.00 6.53
2308 7299 2.815647 GCTCCAAGTCTTCGGCGG 60.816 66.667 7.21 0.00 0.00 6.13
2309 7300 2.815647 GGCTCCAAGTCTTCGGCG 60.816 66.667 0.00 0.00 0.00 6.46
2310 7301 1.448717 GAGGCTCCAAGTCTTCGGC 60.449 63.158 2.15 0.00 24.78 5.54
2311 7302 1.153745 CGAGGCTCCAAGTCTTCGG 60.154 63.158 9.32 0.00 24.78 4.30
2312 7303 1.153745 CCGAGGCTCCAAGTCTTCG 60.154 63.158 9.32 0.00 24.78 3.79
2313 7304 1.448717 GCCGAGGCTCCAAGTCTTC 60.449 63.158 9.32 0.00 38.26 2.87
2314 7305 2.665603 GCCGAGGCTCCAAGTCTT 59.334 61.111 9.32 0.00 38.26 3.01
2315 7306 3.764466 CGCCGAGGCTCCAAGTCT 61.764 66.667 9.32 0.00 39.32 3.24
2336 7327 3.706373 CTCCTGGTGGACGTGGGG 61.706 72.222 0.00 0.00 37.46 4.96
2337 7328 2.603473 TCTCCTGGTGGACGTGGG 60.603 66.667 0.00 0.00 37.46 4.61
2338 7329 2.650116 CCTCTCCTGGTGGACGTGG 61.650 68.421 0.00 0.00 37.46 4.94
2339 7330 1.599606 CTCCTCTCCTGGTGGACGTG 61.600 65.000 0.00 0.00 37.46 4.49
2340 7331 1.304547 CTCCTCTCCTGGTGGACGT 60.305 63.158 0.00 0.00 37.46 4.34
2341 7332 2.055042 CCTCCTCTCCTGGTGGACG 61.055 68.421 0.00 0.00 41.84 4.79
2342 7333 2.363172 GCCTCCTCTCCTGGTGGAC 61.363 68.421 5.90 0.00 41.84 4.02
2343 7334 2.039624 GCCTCCTCTCCTGGTGGA 59.960 66.667 5.90 0.00 41.84 4.02
2344 7335 3.086600 GGCCTCCTCTCCTGGTGG 61.087 72.222 0.00 0.00 42.10 4.61
2345 7336 3.086600 GGGCCTCCTCTCCTGGTG 61.087 72.222 0.84 0.00 0.00 4.17
2346 7337 4.423209 GGGGCCTCCTCTCCTGGT 62.423 72.222 0.84 0.00 0.00 4.00
2347 7338 4.421554 TGGGGCCTCCTCTCCTGG 62.422 72.222 0.00 0.00 36.20 4.45
2348 7339 3.086600 GTGGGGCCTCCTCTCCTG 61.087 72.222 0.00 0.00 36.20 3.86
2349 7340 4.787280 CGTGGGGCCTCCTCTCCT 62.787 72.222 0.00 0.00 36.20 3.69
2351 7342 3.462678 GACGTGGGGCCTCCTCTC 61.463 72.222 0.00 0.00 36.20 3.20
2360 7351 3.706373 CTCCTGGTGGACGTGGGG 61.706 72.222 0.00 0.00 37.46 4.96
2361 7352 2.603473 TCTCCTGGTGGACGTGGG 60.603 66.667 0.00 0.00 37.46 4.61
2362 7353 2.650116 CCTCTCCTGGTGGACGTGG 61.650 68.421 0.00 0.00 37.46 4.94
2363 7354 1.599606 CTCCTCTCCTGGTGGACGTG 61.600 65.000 0.00 0.00 37.46 4.49
2364 7355 1.304547 CTCCTCTCCTGGTGGACGT 60.305 63.158 0.00 0.00 37.46 4.34
2365 7356 2.055042 CCTCCTCTCCTGGTGGACG 61.055 68.421 0.00 0.00 41.84 4.79
2366 7357 2.363172 GCCTCCTCTCCTGGTGGAC 61.363 68.421 5.90 0.00 41.84 4.02
2367 7358 2.039624 GCCTCCTCTCCTGGTGGA 59.960 66.667 5.90 0.00 41.84 4.02
2368 7359 3.086600 GGCCTCCTCTCCTGGTGG 61.087 72.222 0.00 0.00 42.10 4.61
2369 7360 3.086600 GGGCCTCCTCTCCTGGTG 61.087 72.222 0.84 0.00 0.00 4.17
2370 7361 4.787280 CGGGCCTCCTCTCCTGGT 62.787 72.222 0.84 0.00 0.00 4.00
2389 7380 2.521224 ATAGACGGCGGGGAGGTC 60.521 66.667 13.24 0.00 0.00 3.85
2390 7381 2.521224 GATAGACGGCGGGGAGGT 60.521 66.667 13.24 0.00 0.00 3.85
2391 7382 3.303928 GGATAGACGGCGGGGAGG 61.304 72.222 13.24 0.00 0.00 4.30
2392 7383 3.303928 GGGATAGACGGCGGGGAG 61.304 72.222 13.24 0.00 0.00 4.30
2393 7384 4.928140 GGGGATAGACGGCGGGGA 62.928 72.222 13.24 0.00 0.00 4.81
2399 7390 3.303928 GGAGGCGGGGATAGACGG 61.304 72.222 0.00 0.00 0.00 4.79
2400 7391 3.303928 GGGAGGCGGGGATAGACG 61.304 72.222 0.00 0.00 0.00 4.18
2401 7392 2.923568 GGGGAGGCGGGGATAGAC 60.924 72.222 0.00 0.00 0.00 2.59
2402 7393 4.250170 GGGGGAGGCGGGGATAGA 62.250 72.222 0.00 0.00 0.00 1.98
2403 7394 4.574614 TGGGGGAGGCGGGGATAG 62.575 72.222 0.00 0.00 0.00 2.08
2404 7395 4.111094 TTGGGGGAGGCGGGGATA 62.111 66.667 0.00 0.00 0.00 2.59
2412 7403 4.479993 CAGCGAGCTTGGGGGAGG 62.480 72.222 2.37 0.00 0.00 4.30
2413 7404 3.672295 GACAGCGAGCTTGGGGGAG 62.672 68.421 2.37 0.00 0.00 4.30
2414 7405 3.706373 GACAGCGAGCTTGGGGGA 61.706 66.667 2.37 0.00 0.00 4.81
2415 7406 3.672295 GAGACAGCGAGCTTGGGGG 62.672 68.421 2.37 0.00 0.00 5.40
2416 7407 2.125350 GAGACAGCGAGCTTGGGG 60.125 66.667 2.37 0.00 0.00 4.96
2417 7408 2.125350 GGAGACAGCGAGCTTGGG 60.125 66.667 2.37 0.00 0.00 4.12
2418 7409 2.507992 CGGAGACAGCGAGCTTGG 60.508 66.667 2.37 0.00 0.00 3.61
2419 7410 3.184683 GCGGAGACAGCGAGCTTG 61.185 66.667 0.00 0.00 0.00 4.01
2420 7411 4.443266 GGCGGAGACAGCGAGCTT 62.443 66.667 0.00 0.00 31.66 3.74
2423 7414 4.200283 GAGGGCGGAGACAGCGAG 62.200 72.222 0.00 0.00 37.00 5.03
2452 7443 3.391665 GATGAGGTGGTGGCCGGAG 62.392 68.421 5.05 0.00 0.00 4.63
2453 7444 3.399181 GATGAGGTGGTGGCCGGA 61.399 66.667 5.05 0.00 0.00 5.14
2454 7445 4.838152 CGATGAGGTGGTGGCCGG 62.838 72.222 0.00 0.00 0.00 6.13
2455 7446 4.082523 ACGATGAGGTGGTGGCCG 62.083 66.667 0.00 0.00 0.00 6.13
2456 7447 2.436646 CACGATGAGGTGGTGGCC 60.437 66.667 0.00 0.00 33.39 5.36
2462 7453 1.182667 TACCTGACCACGATGAGGTG 58.817 55.000 0.00 0.00 40.09 4.00
2463 7454 1.549170 GTTACCTGACCACGATGAGGT 59.451 52.381 0.00 0.00 43.46 3.85
2464 7455 1.134788 GGTTACCTGACCACGATGAGG 60.135 57.143 0.00 0.00 39.57 3.86
2465 7456 1.134788 GGGTTACCTGACCACGATGAG 60.135 57.143 0.00 0.00 41.65 2.90
2466 7457 0.899720 GGGTTACCTGACCACGATGA 59.100 55.000 0.00 0.00 41.65 2.92
2467 7458 3.453559 GGGTTACCTGACCACGATG 57.546 57.895 0.00 0.00 41.65 3.84
2478 7469 1.338890 GCAGAGGGAGGAGGGTTACC 61.339 65.000 0.00 0.00 0.00 2.85
2479 7470 1.338890 GGCAGAGGGAGGAGGGTTAC 61.339 65.000 0.00 0.00 0.00 2.50
2480 7471 1.003051 GGCAGAGGGAGGAGGGTTA 59.997 63.158 0.00 0.00 0.00 2.85
2481 7472 2.285743 GGCAGAGGGAGGAGGGTT 60.286 66.667 0.00 0.00 0.00 4.11
2482 7473 3.288381 AGGCAGAGGGAGGAGGGT 61.288 66.667 0.00 0.00 0.00 4.34
2483 7474 2.445654 GAGGCAGAGGGAGGAGGG 60.446 72.222 0.00 0.00 0.00 4.30
2484 7475 1.457455 GAGAGGCAGAGGGAGGAGG 60.457 68.421 0.00 0.00 0.00 4.30
2485 7476 0.032217 AAGAGAGGCAGAGGGAGGAG 60.032 60.000 0.00 0.00 0.00 3.69
2486 7477 0.032615 GAAGAGAGGCAGAGGGAGGA 60.033 60.000 0.00 0.00 0.00 3.71
2487 7478 0.032217 AGAAGAGAGGCAGAGGGAGG 60.032 60.000 0.00 0.00 0.00 4.30
2488 7479 1.402787 GAGAAGAGAGGCAGAGGGAG 58.597 60.000 0.00 0.00 0.00 4.30
2489 7480 0.032615 GGAGAAGAGAGGCAGAGGGA 60.033 60.000 0.00 0.00 0.00 4.20
2490 7481 0.032217 AGGAGAAGAGAGGCAGAGGG 60.032 60.000 0.00 0.00 0.00 4.30
2496 7487 2.031870 GGAAGAGAGGAGAAGAGAGGC 58.968 57.143 0.00 0.00 0.00 4.70
2500 7491 3.669939 AGGAGGAAGAGAGGAGAAGAG 57.330 52.381 0.00 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.