Multiple sequence alignment - TraesCS4B01G371300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G371300 | chr4B | 100.000 | 5084 | 0 | 0 | 1 | 5084 | 656898689 | 656903772 | 0.000000e+00 | 9389.0 |
1 | TraesCS4B01G371300 | chr4B | 76.038 | 530 | 73 | 33 | 903 | 1418 | 648502987 | 648502498 | 5.120000e-55 | 226.0 |
2 | TraesCS4B01G371300 | chr4B | 85.535 | 159 | 18 | 4 | 2190 | 2346 | 648501519 | 648501364 | 1.460000e-35 | 161.0 |
3 | TraesCS4B01G371300 | chr4D | 90.517 | 2436 | 160 | 38 | 1845 | 4249 | 509830287 | 509827892 | 0.000000e+00 | 3153.0 |
4 | TraesCS4B01G371300 | chr4D | 84.469 | 1101 | 82 | 38 | 760 | 1804 | 509831423 | 509830356 | 0.000000e+00 | 1003.0 |
5 | TraesCS4B01G371300 | chr4D | 78.213 | 638 | 95 | 24 | 3631 | 4246 | 503356334 | 503355719 | 8.040000e-98 | 368.0 |
6 | TraesCS4B01G371300 | chr4D | 82.809 | 413 | 58 | 7 | 3151 | 3561 | 503357638 | 503357237 | 1.740000e-94 | 357.0 |
7 | TraesCS4B01G371300 | chr4D | 91.770 | 243 | 17 | 3 | 4844 | 5084 | 509827390 | 509827149 | 8.160000e-88 | 335.0 |
8 | TraesCS4B01G371300 | chr4D | 76.295 | 502 | 73 | 29 | 926 | 1418 | 503359346 | 503358882 | 5.120000e-55 | 226.0 |
9 | TraesCS4B01G371300 | chr4D | 88.073 | 109 | 13 | 0 | 2233 | 2341 | 503358313 | 503358205 | 4.130000e-26 | 130.0 |
10 | TraesCS4B01G371300 | chr5A | 90.796 | 1130 | 79 | 11 | 2440 | 3556 | 698639642 | 698638525 | 0.000000e+00 | 1487.0 |
11 | TraesCS4B01G371300 | chr5A | 85.801 | 1155 | 77 | 28 | 3560 | 4652 | 698638397 | 698637268 | 0.000000e+00 | 1144.0 |
12 | TraesCS4B01G371300 | chr5A | 87.056 | 788 | 51 | 13 | 1665 | 2441 | 698640471 | 698639724 | 0.000000e+00 | 843.0 |
13 | TraesCS4B01G371300 | chr5A | 83.744 | 609 | 46 | 26 | 1048 | 1636 | 698641040 | 698640465 | 1.250000e-145 | 527.0 |
14 | TraesCS4B01G371300 | chr5A | 87.013 | 462 | 29 | 16 | 4653 | 5084 | 698637304 | 698636844 | 4.570000e-135 | 492.0 |
15 | TraesCS4B01G371300 | chr5A | 78.644 | 590 | 80 | 23 | 3631 | 4196 | 687691549 | 687690982 | 2.910000e-92 | 350.0 |
16 | TraesCS4B01G371300 | chr5A | 80.147 | 408 | 67 | 8 | 3151 | 3556 | 687692983 | 687692588 | 4.980000e-75 | 292.0 |
17 | TraesCS4B01G371300 | chr5A | 75.285 | 526 | 61 | 41 | 903 | 1418 | 687694897 | 687694431 | 2.420000e-43 | 187.0 |
18 | TraesCS4B01G371300 | chr5A | 83.544 | 158 | 19 | 5 | 2190 | 2343 | 687693733 | 687693579 | 1.910000e-29 | 141.0 |
19 | TraesCS4B01G371300 | chr3D | 85.583 | 652 | 72 | 14 | 16 | 662 | 19743081 | 19743715 | 0.000000e+00 | 664.0 |
20 | TraesCS4B01G371300 | chr5B | 90.389 | 437 | 18 | 13 | 1 | 415 | 670801366 | 670800932 | 2.070000e-153 | 553.0 |
21 | TraesCS4B01G371300 | chr5B | 81.558 | 385 | 51 | 15 | 3188 | 3564 | 170195470 | 170195098 | 2.980000e-77 | 300.0 |
22 | TraesCS4B01G371300 | chr5B | 92.079 | 202 | 15 | 1 | 469 | 669 | 670800554 | 670800353 | 3.000000e-72 | 283.0 |
23 | TraesCS4B01G371300 | chr2B | 90.160 | 437 | 19 | 13 | 1 | 415 | 50571346 | 50570912 | 9.620000e-152 | 547.0 |
24 | TraesCS4B01G371300 | chr2B | 80.893 | 403 | 57 | 14 | 3185 | 3575 | 311739884 | 311740278 | 2.980000e-77 | 300.0 |
25 | TraesCS4B01G371300 | chr2B | 91.500 | 200 | 15 | 2 | 471 | 669 | 50570638 | 50570440 | 1.800000e-69 | 274.0 |
26 | TraesCS4B01G371300 | chr1B | 89.703 | 437 | 20 | 14 | 1 | 415 | 50025004 | 50024571 | 7.490000e-148 | 534.0 |
27 | TraesCS4B01G371300 | chr1B | 91.925 | 161 | 12 | 1 | 509 | 669 | 50024213 | 50024054 | 1.840000e-54 | 224.0 |
28 | TraesCS4B01G371300 | chr5D | 82.642 | 386 | 53 | 9 | 3185 | 3564 | 528156820 | 528157197 | 3.790000e-86 | 329.0 |
29 | TraesCS4B01G371300 | chr7A | 81.728 | 405 | 59 | 11 | 3166 | 3564 | 193437378 | 193437773 | 1.770000e-84 | 324.0 |
30 | TraesCS4B01G371300 | chr3A | 83.333 | 354 | 53 | 5 | 314 | 662 | 27295093 | 27295445 | 6.350000e-84 | 322.0 |
31 | TraesCS4B01G371300 | chr3A | 86.809 | 235 | 26 | 5 | 44 | 278 | 27291767 | 27291996 | 1.820000e-64 | 257.0 |
32 | TraesCS4B01G371300 | chr2D | 80.818 | 391 | 57 | 11 | 3185 | 3564 | 407455049 | 407455432 | 1.790000e-74 | 291.0 |
33 | TraesCS4B01G371300 | chr7B | 77.160 | 162 | 28 | 9 | 207 | 364 | 652947720 | 652947876 | 9.070000e-13 | 86.1 |
34 | TraesCS4B01G371300 | chr4A | 100.000 | 31 | 0 | 0 | 718 | 748 | 614259604 | 614259574 | 1.980000e-04 | 58.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G371300 | chr4B | 656898689 | 656903772 | 5083 | False | 9389.00 | 9389 | 100.000000 | 1 | 5084 | 1 | chr4B.!!$F1 | 5083 |
1 | TraesCS4B01G371300 | chr4D | 509827149 | 509831423 | 4274 | True | 1497.00 | 3153 | 88.918667 | 760 | 5084 | 3 | chr4D.!!$R2 | 4324 |
2 | TraesCS4B01G371300 | chr4D | 503355719 | 503359346 | 3627 | True | 270.25 | 368 | 81.347500 | 926 | 4246 | 4 | chr4D.!!$R1 | 3320 |
3 | TraesCS4B01G371300 | chr5A | 698636844 | 698641040 | 4196 | True | 898.60 | 1487 | 86.882000 | 1048 | 5084 | 5 | chr5A.!!$R2 | 4036 |
4 | TraesCS4B01G371300 | chr5A | 687690982 | 687694897 | 3915 | True | 242.50 | 350 | 79.405000 | 903 | 4196 | 4 | chr5A.!!$R1 | 3293 |
5 | TraesCS4B01G371300 | chr3D | 19743081 | 19743715 | 634 | False | 664.00 | 664 | 85.583000 | 16 | 662 | 1 | chr3D.!!$F1 | 646 |
6 | TraesCS4B01G371300 | chr5B | 670800353 | 670801366 | 1013 | True | 418.00 | 553 | 91.234000 | 1 | 669 | 2 | chr5B.!!$R2 | 668 |
7 | TraesCS4B01G371300 | chr2B | 50570440 | 50571346 | 906 | True | 410.50 | 547 | 90.830000 | 1 | 669 | 2 | chr2B.!!$R1 | 668 |
8 | TraesCS4B01G371300 | chr1B | 50024054 | 50025004 | 950 | True | 379.00 | 534 | 90.814000 | 1 | 669 | 2 | chr1B.!!$R1 | 668 |
9 | TraesCS4B01G371300 | chr3A | 27291767 | 27295445 | 3678 | False | 289.50 | 322 | 85.071000 | 44 | 662 | 2 | chr3A.!!$F1 | 618 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
695 | 4089 | 0.100503 | AAATAAATGCGAGCGCCACC | 59.899 | 50.0 | 12.70 | 0.0 | 41.09 | 4.61 | F |
1615 | 5074 | 0.107214 | TTCGGGCCCTGATGATGTTC | 60.107 | 55.0 | 22.43 | 0.0 | 0.00 | 3.18 | F |
2882 | 6828 | 0.038892 | CACATCTTGCACCAAGTGGC | 60.039 | 55.0 | 0.00 | 0.0 | 41.66 | 5.01 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2002 | 5532 | 0.120377 | AATAGGTGGTGGGACTGGGA | 59.880 | 55.0 | 0.00 | 0.0 | 0.0 | 4.37 | R |
2918 | 6864 | 0.179134 | GGGACGATGACCTCACGAAG | 60.179 | 60.0 | 0.00 | 0.0 | 0.0 | 3.79 | R |
4355 | 9584 | 0.179200 | CATAAAACCACCGCGCTGTC | 60.179 | 55.0 | 5.56 | 0.0 | 0.0 | 3.51 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
96 | 99 | 1.002868 | GGCGAGGATGATGATGGGG | 60.003 | 63.158 | 0.00 | 0.00 | 0.00 | 4.96 |
108 | 111 | 3.379865 | GATGGGGCGGCTACAACGA | 62.380 | 63.158 | 9.56 | 0.00 | 0.00 | 3.85 |
191 | 194 | 4.160439 | TGGAACCATGTTGTGTTTTTGCTA | 59.840 | 37.500 | 0.00 | 0.00 | 0.00 | 3.49 |
203 | 206 | 9.793252 | GTTGTGTTTTTGCTAGAATCATATCAT | 57.207 | 29.630 | 0.00 | 0.00 | 0.00 | 2.45 |
213 | 216 | 9.341078 | TGCTAGAATCATATCATTGTTTTGCTA | 57.659 | 29.630 | 0.00 | 0.00 | 0.00 | 3.49 |
268 | 272 | 8.970859 | ATCAAAATTTTGTTGGAACCATGTTA | 57.029 | 26.923 | 25.98 | 6.28 | 39.18 | 2.41 |
342 | 3408 | 7.658525 | TGCTGGAACCATATCAATTATTTGT | 57.341 | 32.000 | 0.00 | 0.00 | 34.32 | 2.83 |
421 | 3487 | 2.506438 | GACACTGGTACGAGCGGC | 60.506 | 66.667 | 4.60 | 0.00 | 0.00 | 6.53 |
446 | 3512 | 0.538977 | AACCGACGACAAGAGGAGGA | 60.539 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
450 | 3516 | 1.676314 | CGACGACAAGAGGAGGAGAGA | 60.676 | 57.143 | 0.00 | 0.00 | 0.00 | 3.10 |
454 | 3520 | 1.412343 | GACAAGAGGAGGAGAGATGCC | 59.588 | 57.143 | 0.00 | 0.00 | 0.00 | 4.40 |
456 | 3522 | 0.758685 | AAGAGGAGGAGAGATGCCGG | 60.759 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
504 | 3895 | 2.100197 | CTGGAGGGACGACACAATCTA | 58.900 | 52.381 | 0.00 | 0.00 | 0.00 | 1.98 |
513 | 3904 | 1.481871 | GACACAATCTAGACGGGGGA | 58.518 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
514 | 3905 | 2.040178 | GACACAATCTAGACGGGGGAT | 58.960 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
551 | 3942 | 2.758327 | ATACGGAGCTCGGGCACA | 60.758 | 61.111 | 23.45 | 7.71 | 44.45 | 4.57 |
629 | 4023 | 2.760650 | ACGGTTCTGTGCATCTCTATCA | 59.239 | 45.455 | 0.00 | 0.00 | 0.00 | 2.15 |
639 | 4033 | 1.959985 | CATCTCTATCAGACGCTGGGT | 59.040 | 52.381 | 0.00 | 0.00 | 32.26 | 4.51 |
669 | 4063 | 0.970427 | CCTAAATTTGGGCCCGTGCT | 60.970 | 55.000 | 19.37 | 2.54 | 37.74 | 4.40 |
670 | 4064 | 0.455815 | CTAAATTTGGGCCCGTGCTC | 59.544 | 55.000 | 19.37 | 0.00 | 38.98 | 4.26 |
671 | 4065 | 1.309499 | TAAATTTGGGCCCGTGCTCG | 61.309 | 55.000 | 19.37 | 0.14 | 42.67 | 5.03 |
677 | 4071 | 4.849310 | GGCCCGTGCTCGCCATAA | 62.849 | 66.667 | 1.89 | 0.00 | 45.01 | 1.90 |
678 | 4072 | 2.822255 | GCCCGTGCTCGCCATAAA | 60.822 | 61.111 | 1.89 | 0.00 | 35.54 | 1.40 |
679 | 4073 | 2.186826 | GCCCGTGCTCGCCATAAAT | 61.187 | 57.895 | 1.89 | 0.00 | 35.54 | 1.40 |
680 | 4074 | 0.882927 | GCCCGTGCTCGCCATAAATA | 60.883 | 55.000 | 1.89 | 0.00 | 35.54 | 1.40 |
681 | 4075 | 1.588674 | CCCGTGCTCGCCATAAATAA | 58.411 | 50.000 | 1.89 | 0.00 | 35.54 | 1.40 |
682 | 4076 | 1.944024 | CCCGTGCTCGCCATAAATAAA | 59.056 | 47.619 | 1.89 | 0.00 | 35.54 | 1.40 |
683 | 4077 | 2.552315 | CCCGTGCTCGCCATAAATAAAT | 59.448 | 45.455 | 1.89 | 0.00 | 35.54 | 1.40 |
684 | 4078 | 3.554524 | CCGTGCTCGCCATAAATAAATG | 58.445 | 45.455 | 1.89 | 0.00 | 35.54 | 2.32 |
685 | 4079 | 2.973224 | CGTGCTCGCCATAAATAAATGC | 59.027 | 45.455 | 0.00 | 0.00 | 0.00 | 3.56 |
686 | 4080 | 2.973224 | GTGCTCGCCATAAATAAATGCG | 59.027 | 45.455 | 0.00 | 0.00 | 0.00 | 4.73 |
687 | 4081 | 2.875317 | TGCTCGCCATAAATAAATGCGA | 59.125 | 40.909 | 4.76 | 4.76 | 35.58 | 5.10 |
688 | 4082 | 3.058983 | TGCTCGCCATAAATAAATGCGAG | 60.059 | 43.478 | 23.26 | 23.26 | 45.58 | 5.03 |
689 | 4083 | 3.482786 | CTCGCCATAAATAAATGCGAGC | 58.517 | 45.455 | 17.55 | 0.00 | 41.66 | 5.03 |
690 | 4084 | 2.096466 | TCGCCATAAATAAATGCGAGCG | 60.096 | 45.455 | 0.25 | 0.00 | 36.80 | 5.03 |
691 | 4085 | 1.978782 | GCCATAAATAAATGCGAGCGC | 59.021 | 47.619 | 8.08 | 8.08 | 42.35 | 5.92 |
692 | 4086 | 2.584791 | CCATAAATAAATGCGAGCGCC | 58.415 | 47.619 | 12.70 | 0.00 | 41.09 | 6.53 |
693 | 4087 | 2.031245 | CCATAAATAAATGCGAGCGCCA | 60.031 | 45.455 | 12.70 | 0.00 | 41.09 | 5.69 |
694 | 4088 | 2.748461 | TAAATAAATGCGAGCGCCAC | 57.252 | 45.000 | 12.70 | 0.00 | 41.09 | 5.01 |
695 | 4089 | 0.100503 | AAATAAATGCGAGCGCCACC | 59.899 | 50.000 | 12.70 | 0.00 | 41.09 | 4.61 |
696 | 4090 | 1.724582 | AATAAATGCGAGCGCCACCC | 61.725 | 55.000 | 12.70 | 0.00 | 41.09 | 4.61 |
697 | 4091 | 2.608970 | ATAAATGCGAGCGCCACCCT | 62.609 | 55.000 | 12.70 | 0.00 | 41.09 | 4.34 |
712 | 4106 | 4.769920 | CCTGGTGGGATGGGGATA | 57.230 | 61.111 | 0.00 | 0.00 | 37.23 | 2.59 |
713 | 4107 | 3.203834 | CCTGGTGGGATGGGGATAT | 57.796 | 57.895 | 0.00 | 0.00 | 37.23 | 1.63 |
714 | 4108 | 0.995024 | CCTGGTGGGATGGGGATATC | 59.005 | 60.000 | 0.00 | 0.00 | 37.23 | 1.63 |
715 | 4109 | 1.746157 | CTGGTGGGATGGGGATATCA | 58.254 | 55.000 | 4.83 | 0.00 | 0.00 | 2.15 |
716 | 4110 | 2.281966 | CTGGTGGGATGGGGATATCAT | 58.718 | 52.381 | 4.83 | 0.00 | 0.00 | 2.45 |
717 | 4111 | 2.651334 | CTGGTGGGATGGGGATATCATT | 59.349 | 50.000 | 4.83 | 0.00 | 0.00 | 2.57 |
718 | 4112 | 2.379567 | TGGTGGGATGGGGATATCATTG | 59.620 | 50.000 | 4.83 | 0.00 | 0.00 | 2.82 |
719 | 4113 | 2.379907 | GGTGGGATGGGGATATCATTGT | 59.620 | 50.000 | 4.83 | 0.00 | 0.00 | 2.71 |
720 | 4114 | 3.562176 | GGTGGGATGGGGATATCATTGTC | 60.562 | 52.174 | 4.83 | 0.00 | 0.00 | 3.18 |
721 | 4115 | 2.649312 | TGGGATGGGGATATCATTGTCC | 59.351 | 50.000 | 4.83 | 6.49 | 32.53 | 4.02 |
729 | 4123 | 5.117406 | GGGATATCATTGTCCCCCTAATC | 57.883 | 47.826 | 4.83 | 0.00 | 45.35 | 1.75 |
730 | 4124 | 4.540099 | GGGATATCATTGTCCCCCTAATCA | 59.460 | 45.833 | 4.83 | 0.00 | 45.35 | 2.57 |
731 | 4125 | 5.194537 | GGGATATCATTGTCCCCCTAATCAT | 59.805 | 44.000 | 4.83 | 0.00 | 45.35 | 2.45 |
732 | 4126 | 6.360618 | GGATATCATTGTCCCCCTAATCATC | 58.639 | 44.000 | 4.83 | 0.00 | 0.00 | 2.92 |
733 | 4127 | 4.664688 | ATCATTGTCCCCCTAATCATCC | 57.335 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
734 | 4128 | 3.402353 | TCATTGTCCCCCTAATCATCCA | 58.598 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
735 | 4129 | 3.790976 | TCATTGTCCCCCTAATCATCCAA | 59.209 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
736 | 4130 | 3.662759 | TTGTCCCCCTAATCATCCAAC | 57.337 | 47.619 | 0.00 | 0.00 | 0.00 | 3.77 |
737 | 4131 | 1.850345 | TGTCCCCCTAATCATCCAACC | 59.150 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
738 | 4132 | 1.850345 | GTCCCCCTAATCATCCAACCA | 59.150 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
739 | 4133 | 1.850345 | TCCCCCTAATCATCCAACCAC | 59.150 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
740 | 4134 | 1.568597 | CCCCCTAATCATCCAACCACA | 59.431 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
741 | 4135 | 2.177669 | CCCCCTAATCATCCAACCACAT | 59.822 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
742 | 4136 | 3.225104 | CCCCTAATCATCCAACCACATG | 58.775 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
743 | 4137 | 3.373001 | CCCCTAATCATCCAACCACATGT | 60.373 | 47.826 | 0.00 | 0.00 | 0.00 | 3.21 |
744 | 4138 | 4.280819 | CCCTAATCATCCAACCACATGTT | 58.719 | 43.478 | 0.00 | 0.00 | 37.80 | 2.71 |
753 | 4147 | 1.549203 | AACCACATGTTGATCAGGCC | 58.451 | 50.000 | 3.55 | 0.00 | 35.31 | 5.19 |
754 | 4148 | 0.700564 | ACCACATGTTGATCAGGCCT | 59.299 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
755 | 4149 | 1.915489 | ACCACATGTTGATCAGGCCTA | 59.085 | 47.619 | 3.98 | 0.00 | 0.00 | 3.93 |
756 | 4150 | 2.511218 | ACCACATGTTGATCAGGCCTAT | 59.489 | 45.455 | 3.98 | 0.00 | 0.00 | 2.57 |
757 | 4151 | 2.882761 | CCACATGTTGATCAGGCCTATG | 59.117 | 50.000 | 3.98 | 6.38 | 0.00 | 2.23 |
758 | 4152 | 2.882761 | CACATGTTGATCAGGCCTATGG | 59.117 | 50.000 | 3.98 | 0.00 | 0.00 | 2.74 |
843 | 4237 | 0.247974 | AGACGCGTGTACGATGCTAC | 60.248 | 55.000 | 20.70 | 0.00 | 43.02 | 3.58 |
847 | 4241 | 0.921347 | GCGTGTACGATGCTACCTTG | 59.079 | 55.000 | 8.82 | 0.00 | 43.02 | 3.61 |
913 | 4315 | 1.764180 | TTCGTTTGGAACACCGTCGC | 61.764 | 55.000 | 0.00 | 0.00 | 39.29 | 5.19 |
914 | 4316 | 2.247267 | GTTTGGAACACCGTCGCG | 59.753 | 61.111 | 0.00 | 0.00 | 39.29 | 5.87 |
915 | 4317 | 2.202905 | TTTGGAACACCGTCGCGT | 60.203 | 55.556 | 5.77 | 0.00 | 39.29 | 6.01 |
916 | 4318 | 2.239124 | TTTGGAACACCGTCGCGTC | 61.239 | 57.895 | 5.77 | 0.00 | 39.29 | 5.19 |
917 | 4319 | 4.986587 | TGGAACACCGTCGCGTCG | 62.987 | 66.667 | 18.65 | 18.65 | 0.00 | 5.12 |
937 | 4340 | 2.434884 | ACGCACGGCCAATCTCAG | 60.435 | 61.111 | 2.24 | 0.00 | 0.00 | 3.35 |
966 | 4369 | 1.442184 | CGTTGTCTCGTCCCGTCTG | 60.442 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
1027 | 4430 | 2.364448 | GACCTCCGCTTCCCCTCT | 60.364 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
1031 | 4434 | 4.377760 | TCCGCTTCCCCTCTCCGT | 62.378 | 66.667 | 0.00 | 0.00 | 0.00 | 4.69 |
1049 | 4458 | 4.883300 | CGCCGTCGCCGTACTCTC | 62.883 | 72.222 | 0.00 | 0.00 | 0.00 | 3.20 |
1051 | 4460 | 4.233635 | CCGTCGCCGTACTCTCCG | 62.234 | 72.222 | 0.00 | 0.00 | 0.00 | 4.63 |
1120 | 4532 | 1.229209 | TCCACCCTCACCCACTCTC | 60.229 | 63.158 | 0.00 | 0.00 | 0.00 | 3.20 |
1127 | 4539 | 1.229209 | TCACCCACTCTCCTCCCAC | 60.229 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
1133 | 4545 | 0.911525 | CACTCTCCTCCCACCCATGT | 60.912 | 60.000 | 0.00 | 0.00 | 0.00 | 3.21 |
1146 | 4558 | 2.615447 | CACCCATGTCTCGATTGATTGG | 59.385 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1150 | 4562 | 3.940852 | CCATGTCTCGATTGATTGGTTGA | 59.059 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
1156 | 4568 | 3.996363 | CTCGATTGATTGGTTGACTGACA | 59.004 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
1158 | 4570 | 3.125829 | CGATTGATTGGTTGACTGACAGG | 59.874 | 47.826 | 7.51 | 0.00 | 0.00 | 4.00 |
1160 | 4572 | 3.576078 | TGATTGGTTGACTGACAGGTT | 57.424 | 42.857 | 7.51 | 0.00 | 0.00 | 3.50 |
1161 | 4573 | 3.897239 | TGATTGGTTGACTGACAGGTTT | 58.103 | 40.909 | 7.51 | 0.00 | 0.00 | 3.27 |
1162 | 4574 | 3.631686 | TGATTGGTTGACTGACAGGTTTG | 59.368 | 43.478 | 7.51 | 0.00 | 0.00 | 2.93 |
1163 | 4575 | 2.051334 | TGGTTGACTGACAGGTTTGG | 57.949 | 50.000 | 7.51 | 0.00 | 0.00 | 3.28 |
1164 | 4576 | 1.318576 | GGTTGACTGACAGGTTTGGG | 58.681 | 55.000 | 7.51 | 0.00 | 0.00 | 4.12 |
1165 | 4577 | 1.409661 | GGTTGACTGACAGGTTTGGGT | 60.410 | 52.381 | 7.51 | 0.00 | 0.00 | 4.51 |
1168 | 4580 | 1.318576 | GACTGACAGGTTTGGGTTGG | 58.681 | 55.000 | 7.51 | 0.00 | 0.00 | 3.77 |
1172 | 4584 | 1.006043 | TGACAGGTTTGGGTTGGTTGA | 59.994 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
1177 | 4589 | 1.000394 | GGTTTGGGTTGGTTGATTCGG | 60.000 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
1179 | 4591 | 1.182385 | TTGGGTTGGTTGATTCGGGC | 61.182 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1180 | 4592 | 1.304134 | GGGTTGGTTGATTCGGGCT | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
1291 | 4735 | 1.321074 | ACGACCGACCCCATCTTCTC | 61.321 | 60.000 | 0.00 | 0.00 | 0.00 | 2.87 |
1310 | 4765 | 4.637663 | CCCCCTCCTCTCATCCTC | 57.362 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
1312 | 4767 | 1.231641 | CCCCTCCTCTCATCCTCGT | 59.768 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
1313 | 4768 | 0.825840 | CCCCTCCTCTCATCCTCGTC | 60.826 | 65.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1314 | 4769 | 0.184933 | CCCTCCTCTCATCCTCGTCT | 59.815 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1315 | 4770 | 1.604604 | CCTCCTCTCATCCTCGTCTC | 58.395 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1316 | 4771 | 1.604604 | CTCCTCTCATCCTCGTCTCC | 58.395 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1317 | 4772 | 0.919710 | TCCTCTCATCCTCGTCTCCA | 59.080 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1339 | 4797 | 1.925229 | GCTGCAGCTTGACTCTCTAG | 58.075 | 55.000 | 31.33 | 0.00 | 38.21 | 2.43 |
1340 | 4798 | 1.204467 | GCTGCAGCTTGACTCTCTAGT | 59.796 | 52.381 | 31.33 | 0.00 | 37.00 | 2.57 |
1342 | 4800 | 3.510719 | CTGCAGCTTGACTCTCTAGTTC | 58.489 | 50.000 | 0.00 | 0.00 | 35.56 | 3.01 |
1349 | 4807 | 2.779506 | TGACTCTCTAGTTCGTGCTCA | 58.220 | 47.619 | 0.00 | 0.00 | 35.56 | 4.26 |
1422 | 4880 | 0.890996 | CCACCAACAGGTCTGCTTCC | 60.891 | 60.000 | 0.00 | 0.00 | 31.84 | 3.46 |
1439 | 4897 | 0.546122 | TCCACTTCAACCAGCACAGT | 59.454 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
1440 | 4898 | 1.064758 | TCCACTTCAACCAGCACAGTT | 60.065 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
1441 | 4899 | 1.750778 | CCACTTCAACCAGCACAGTTT | 59.249 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
1514 | 4973 | 7.446769 | TGCTCTAACTGTTGTAAAATCCACTA | 58.553 | 34.615 | 2.69 | 0.00 | 0.00 | 2.74 |
1528 | 4987 | 9.836076 | GTAAAATCCACTAACCATACTGTTTTC | 57.164 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
1531 | 4990 | 4.600111 | TCCACTAACCATACTGTTTTCCCT | 59.400 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
1532 | 4991 | 5.786457 | TCCACTAACCATACTGTTTTCCCTA | 59.214 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1534 | 4993 | 7.624478 | TCCACTAACCATACTGTTTTCCCTATA | 59.376 | 37.037 | 0.00 | 0.00 | 0.00 | 1.31 |
1535 | 4994 | 7.713942 | CCACTAACCATACTGTTTTCCCTATAC | 59.286 | 40.741 | 0.00 | 0.00 | 0.00 | 1.47 |
1536 | 4995 | 8.262227 | CACTAACCATACTGTTTTCCCTATACA | 58.738 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
1537 | 4996 | 8.999895 | ACTAACCATACTGTTTTCCCTATACAT | 58.000 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
1538 | 4997 | 9.273016 | CTAACCATACTGTTTTCCCTATACATG | 57.727 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
1540 | 4999 | 7.280356 | ACCATACTGTTTTCCCTATACATGTC | 58.720 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
1541 | 5000 | 7.092623 | ACCATACTGTTTTCCCTATACATGTCA | 60.093 | 37.037 | 0.00 | 0.00 | 0.00 | 3.58 |
1542 | 5001 | 7.939039 | CCATACTGTTTTCCCTATACATGTCAT | 59.061 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
1543 | 5002 | 9.342308 | CATACTGTTTTCCCTATACATGTCATT | 57.658 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
1544 | 5003 | 9.920946 | ATACTGTTTTCCCTATACATGTCATTT | 57.079 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
1545 | 5004 | 8.650143 | ACTGTTTTCCCTATACATGTCATTTT | 57.350 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
1615 | 5074 | 0.107214 | TTCGGGCCCTGATGATGTTC | 60.107 | 55.000 | 22.43 | 0.00 | 0.00 | 3.18 |
1628 | 5087 | 2.430465 | TGATGTTCTTTCCTCTGCTGC | 58.570 | 47.619 | 0.00 | 0.00 | 0.00 | 5.25 |
1645 | 5107 | 2.612471 | GCTGCATGCTGGGTAGATAGAG | 60.612 | 54.545 | 23.88 | 7.68 | 38.95 | 2.43 |
1715 | 5179 | 3.055240 | AGGTGAAGGAGATGAAAGAGCTG | 60.055 | 47.826 | 0.00 | 0.00 | 0.00 | 4.24 |
1763 | 5235 | 6.019748 | CCTGTCTCAGGTATATCATACCCTT | 58.980 | 44.000 | 10.98 | 0.00 | 45.82 | 3.95 |
1777 | 5249 | 6.817765 | TCATACCCTTCTGTCATTTTGTTC | 57.182 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
1901 | 5424 | 1.304134 | GGGGAACTTGATTGGCCGT | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 5.68 |
1999 | 5529 | 4.151689 | CGGCTTTCAGACTTATTCGTTTCA | 59.848 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
2002 | 5532 | 5.179555 | GCTTTCAGACTTATTCGTTTCACCT | 59.820 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2003 | 5533 | 6.618805 | GCTTTCAGACTTATTCGTTTCACCTC | 60.619 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
2004 | 5534 | 4.817517 | TCAGACTTATTCGTTTCACCTCC | 58.182 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
2005 | 5535 | 3.933332 | CAGACTTATTCGTTTCACCTCCC | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2006 | 5536 | 3.581332 | AGACTTATTCGTTTCACCTCCCA | 59.419 | 43.478 | 0.00 | 0.00 | 0.00 | 4.37 |
2007 | 5537 | 3.933332 | GACTTATTCGTTTCACCTCCCAG | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 4.45 |
2037 | 5567 | 5.589855 | CCACCTATTGTATGCAACTGAATGA | 59.410 | 40.000 | 0.00 | 0.00 | 37.44 | 2.57 |
2086 | 5792 | 2.238521 | GCCTCTCTCCTCATGTCTAGG | 58.761 | 57.143 | 0.00 | 0.00 | 35.26 | 3.02 |
2103 | 5809 | 2.764314 | GGCATGCCAACTAGTGCCG | 61.764 | 63.158 | 32.08 | 0.00 | 46.50 | 5.69 |
2105 | 5811 | 2.114670 | CATGCCAACTAGTGCCGGG | 61.115 | 63.158 | 2.18 | 0.00 | 0.00 | 5.73 |
2136 | 5848 | 5.011533 | CCCCAAAAATGTTCATACAAGGTCA | 59.988 | 40.000 | 0.00 | 0.00 | 37.91 | 4.02 |
2144 | 5856 | 9.912634 | AAATGTTCATACAAGGTCATACTTTTG | 57.087 | 29.630 | 0.00 | 0.00 | 37.91 | 2.44 |
2172 | 5891 | 4.322080 | TCAATGATGAGTAGGCCTTACG | 57.678 | 45.455 | 12.58 | 0.00 | 37.35 | 3.18 |
2185 | 5904 | 1.269102 | GCCTTACGCTTCGCAGAGATA | 60.269 | 52.381 | 0.00 | 0.00 | 38.43 | 1.98 |
2186 | 5905 | 2.608261 | GCCTTACGCTTCGCAGAGATAT | 60.608 | 50.000 | 0.00 | 0.00 | 38.43 | 1.63 |
2187 | 5906 | 3.366070 | GCCTTACGCTTCGCAGAGATATA | 60.366 | 47.826 | 0.00 | 0.00 | 38.43 | 0.86 |
2188 | 5907 | 4.675671 | GCCTTACGCTTCGCAGAGATATAT | 60.676 | 45.833 | 0.00 | 0.00 | 38.43 | 0.86 |
2221 | 5940 | 8.339714 | TCAGTTTTTGTGCAGTAAGTTATGTAC | 58.660 | 33.333 | 0.00 | 0.00 | 33.26 | 2.90 |
2312 | 6044 | 1.066454 | GCCGCTTTGTGGTGTAAGTTT | 59.934 | 47.619 | 0.00 | 0.00 | 35.34 | 2.66 |
2319 | 6051 | 7.013529 | CGCTTTGTGGTGTAAGTTTATCTAAC | 58.986 | 38.462 | 0.00 | 0.00 | 36.99 | 2.34 |
2349 | 6089 | 8.220755 | TCCAACTAATATCCAGTTTGTTATGC | 57.779 | 34.615 | 0.97 | 0.00 | 33.99 | 3.14 |
2364 | 6104 | 3.632604 | TGTTATGCCAAGTTTTCAACCGA | 59.367 | 39.130 | 0.00 | 0.00 | 0.00 | 4.69 |
2370 | 6110 | 3.691498 | CCAAGTTTTCAACCGACAACTC | 58.309 | 45.455 | 0.00 | 0.00 | 40.47 | 3.01 |
2401 | 6141 | 9.905713 | ACAGACTGGCAAATTATCTAAGAATAA | 57.094 | 29.630 | 7.51 | 0.00 | 0.00 | 1.40 |
2543 | 6366 | 0.809385 | CCCTGAGCACTTGCAAGATG | 59.191 | 55.000 | 32.50 | 24.45 | 45.16 | 2.90 |
2550 | 6375 | 2.295349 | AGCACTTGCAAGATGTTTGGAG | 59.705 | 45.455 | 32.50 | 3.05 | 45.16 | 3.86 |
2588 | 6413 | 9.713713 | TGCAACTATCAGTGTTGTAGTTATTTA | 57.286 | 29.630 | 13.79 | 4.03 | 44.54 | 1.40 |
2623 | 6448 | 3.256631 | GTGTTCATGAAGCCCTGATGTTT | 59.743 | 43.478 | 8.80 | 0.00 | 0.00 | 2.83 |
2625 | 6450 | 5.048083 | GTGTTCATGAAGCCCTGATGTTTAA | 60.048 | 40.000 | 8.80 | 0.00 | 0.00 | 1.52 |
2655 | 6480 | 4.834406 | ATCCCCCTTCTACAGTCTGATA | 57.166 | 45.455 | 6.91 | 0.00 | 0.00 | 2.15 |
2686 | 6514 | 6.266558 | AGCTACCTCCTAACATTGTATCTCTG | 59.733 | 42.308 | 0.00 | 0.00 | 0.00 | 3.35 |
2775 | 6603 | 6.986817 | GGACTACGTACAGGTATTAGTGTCTA | 59.013 | 42.308 | 0.00 | 0.00 | 0.00 | 2.59 |
2882 | 6828 | 0.038892 | CACATCTTGCACCAAGTGGC | 60.039 | 55.000 | 0.00 | 0.00 | 41.66 | 5.01 |
2918 | 6864 | 5.049680 | CCCAACGGTGAGTATTATATTGCAC | 60.050 | 44.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2947 | 6893 | 2.100252 | GGTCATCGTCCCGATAAACAGA | 59.900 | 50.000 | 0.00 | 0.00 | 45.19 | 3.41 |
2977 | 6923 | 9.865321 | TCACCTTTATGTTATTGTAGTCAGTAC | 57.135 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
3034 | 6988 | 3.064207 | CAAATTGCTTGCTGTGCTGATT | 58.936 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
3044 | 6998 | 3.436704 | TGCTGTGCTGATTAGTTAACTGC | 59.563 | 43.478 | 18.56 | 12.57 | 33.65 | 4.40 |
3050 | 7004 | 7.102993 | TGTGCTGATTAGTTAACTGCTATTGA | 58.897 | 34.615 | 18.56 | 0.00 | 0.00 | 2.57 |
3224 | 7336 | 8.692110 | TTAAGTAGGTAATCGTAATGTGTGTG | 57.308 | 34.615 | 0.00 | 0.00 | 0.00 | 3.82 |
3281 | 7393 | 7.800380 | CAGAATGCAATATCGTAGAAACCATTC | 59.200 | 37.037 | 0.00 | 0.00 | 43.58 | 2.67 |
3300 | 7412 | 5.221501 | CCATTCATTGGCCTTTAACCATAGG | 60.222 | 44.000 | 3.32 | 0.00 | 39.09 | 2.57 |
3302 | 7414 | 8.996885 | CCATTCATTGGCCTTTAACCATAGGTT | 61.997 | 40.741 | 3.32 | 6.66 | 43.20 | 3.50 |
3303 | 7415 | 6.080969 | TCATTGGCCTTTAACCATAGGTTA | 57.919 | 37.500 | 3.32 | 4.59 | 44.94 | 2.85 |
3331 | 7443 | 7.769044 | GGAACTAAACCAGAGCAGTATTCAATA | 59.231 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
3332 | 7444 | 8.723942 | AACTAAACCAGAGCAGTATTCAATAG | 57.276 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
3431 | 7545 | 6.184789 | TCCCAAACTTAACAATGAGATACCC | 58.815 | 40.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3459 | 7573 | 6.430000 | TGAAAGAAATGCTACCTACAAGGAAC | 59.570 | 38.462 | 0.00 | 0.00 | 37.67 | 3.62 |
3583 | 7822 | 4.568072 | ATGGTGCACTGTATAAGTTGGA | 57.432 | 40.909 | 17.98 | 0.00 | 36.83 | 3.53 |
3626 | 8780 | 3.006537 | TCGCCTATGATGCCCTTAACTAC | 59.993 | 47.826 | 0.00 | 0.00 | 0.00 | 2.73 |
3627 | 8781 | 3.006967 | CGCCTATGATGCCCTTAACTACT | 59.993 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
3628 | 8782 | 4.503296 | CGCCTATGATGCCCTTAACTACTT | 60.503 | 45.833 | 0.00 | 0.00 | 0.00 | 2.24 |
3629 | 8783 | 5.279306 | CGCCTATGATGCCCTTAACTACTTA | 60.279 | 44.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3665 | 8820 | 5.305139 | TGATGTGCAGTTTGAGAATGATG | 57.695 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
3700 | 8855 | 0.671796 | GGGAAACTTCGTGGTTTGGG | 59.328 | 55.000 | 11.68 | 0.00 | 39.20 | 4.12 |
3749 | 8904 | 1.860240 | TCCTACCTCCTCAGCAGGTAT | 59.140 | 52.381 | 0.00 | 0.00 | 44.08 | 2.73 |
3750 | 8905 | 3.061369 | TCCTACCTCCTCAGCAGGTATA | 58.939 | 50.000 | 0.00 | 0.00 | 44.08 | 1.47 |
3751 | 8906 | 3.465966 | TCCTACCTCCTCAGCAGGTATAA | 59.534 | 47.826 | 0.00 | 0.00 | 44.08 | 0.98 |
3752 | 8907 | 4.108124 | TCCTACCTCCTCAGCAGGTATAAT | 59.892 | 45.833 | 0.00 | 0.00 | 44.08 | 1.28 |
3753 | 8908 | 5.315109 | TCCTACCTCCTCAGCAGGTATAATA | 59.685 | 44.000 | 0.00 | 0.00 | 44.08 | 0.98 |
3757 | 8912 | 5.540719 | ACCTCCTCAGCAGGTATAATAGAAC | 59.459 | 44.000 | 0.00 | 0.00 | 42.91 | 3.01 |
3760 | 8915 | 7.291411 | TCCTCAGCAGGTATAATAGAACTTC | 57.709 | 40.000 | 0.00 | 0.00 | 41.28 | 3.01 |
3785 | 8957 | 5.690409 | TGTTCTTCATGTTCAACTAGTCGAC | 59.310 | 40.000 | 7.70 | 7.70 | 0.00 | 4.20 |
3786 | 8958 | 5.447624 | TCTTCATGTTCAACTAGTCGACA | 57.552 | 39.130 | 19.50 | 2.03 | 0.00 | 4.35 |
3799 | 8971 | 0.511653 | GTCGACAAAGTTTCGAGGCC | 59.488 | 55.000 | 11.55 | 0.00 | 45.76 | 5.19 |
3810 | 8982 | 0.740868 | TTCGAGGCCATTTCTGCTCG | 60.741 | 55.000 | 5.01 | 2.37 | 33.62 | 5.03 |
3830 | 9002 | 1.887956 | GCTGACCCTGGCAAGATTTGA | 60.888 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
3883 | 9055 | 2.224159 | GGTCTGAAGGCCCTGGACA | 61.224 | 63.158 | 0.00 | 1.08 | 0.00 | 4.02 |
3906 | 9078 | 2.087009 | CGGGCGAGTCAAGTTCGTC | 61.087 | 63.158 | 0.00 | 0.00 | 41.64 | 4.20 |
3909 | 9081 | 0.733223 | GGCGAGTCAAGTTCGTCTCC | 60.733 | 60.000 | 0.00 | 0.00 | 39.43 | 3.71 |
3993 | 9165 | 4.792068 | TGAAGGACAAACCATCTGTTTCT | 58.208 | 39.130 | 0.00 | 0.00 | 45.35 | 2.52 |
4082 | 9263 | 1.135915 | CCTCCTTCAGTCCTCGACATG | 59.864 | 57.143 | 0.00 | 0.00 | 34.60 | 3.21 |
4083 | 9264 | 2.095461 | CTCCTTCAGTCCTCGACATGA | 58.905 | 52.381 | 0.00 | 0.00 | 34.60 | 3.07 |
4084 | 9265 | 2.692557 | CTCCTTCAGTCCTCGACATGAT | 59.307 | 50.000 | 0.00 | 0.00 | 34.60 | 2.45 |
4085 | 9266 | 2.428530 | TCCTTCAGTCCTCGACATGATG | 59.571 | 50.000 | 0.00 | 0.00 | 34.60 | 3.07 |
4086 | 9267 | 2.428530 | CCTTCAGTCCTCGACATGATGA | 59.571 | 50.000 | 0.00 | 0.00 | 34.60 | 2.92 |
4087 | 9268 | 3.069300 | CCTTCAGTCCTCGACATGATGAT | 59.931 | 47.826 | 0.00 | 0.00 | 34.60 | 2.45 |
4114 | 9296 | 1.538047 | CACCATCTTGTTGTCAGGGG | 58.462 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4119 | 9301 | 4.726825 | ACCATCTTGTTGTCAGGGGTATAT | 59.273 | 41.667 | 0.00 | 0.00 | 0.00 | 0.86 |
4120 | 9302 | 5.908831 | ACCATCTTGTTGTCAGGGGTATATA | 59.091 | 40.000 | 0.00 | 0.00 | 0.00 | 0.86 |
4121 | 9303 | 6.562608 | ACCATCTTGTTGTCAGGGGTATATAT | 59.437 | 38.462 | 0.00 | 0.00 | 0.00 | 0.86 |
4122 | 9304 | 7.737607 | ACCATCTTGTTGTCAGGGGTATATATA | 59.262 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
4123 | 9305 | 8.260818 | CCATCTTGTTGTCAGGGGTATATATAG | 58.739 | 40.741 | 0.00 | 0.00 | 0.00 | 1.31 |
4124 | 9306 | 8.816894 | CATCTTGTTGTCAGGGGTATATATAGT | 58.183 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
4126 | 9308 | 7.787904 | TCTTGTTGTCAGGGGTATATATAGTGT | 59.212 | 37.037 | 0.00 | 0.00 | 0.00 | 3.55 |
4128 | 9310 | 7.732025 | TGTTGTCAGGGGTATATATAGTGTTG | 58.268 | 38.462 | 0.00 | 0.00 | 0.00 | 3.33 |
4130 | 9312 | 6.626238 | TGTCAGGGGTATATATAGTGTTGGA | 58.374 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
4131 | 9313 | 6.724441 | TGTCAGGGGTATATATAGTGTTGGAG | 59.276 | 42.308 | 0.00 | 0.00 | 0.00 | 3.86 |
4132 | 9314 | 6.724905 | GTCAGGGGTATATATAGTGTTGGAGT | 59.275 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
4133 | 9315 | 6.724441 | TCAGGGGTATATATAGTGTTGGAGTG | 59.276 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
4134 | 9316 | 6.023603 | AGGGGTATATATAGTGTTGGAGTGG | 58.976 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4135 | 9317 | 5.783875 | GGGGTATATATAGTGTTGGAGTGGT | 59.216 | 44.000 | 0.00 | 0.00 | 0.00 | 4.16 |
4136 | 9318 | 6.070938 | GGGGTATATATAGTGTTGGAGTGGTC | 60.071 | 46.154 | 0.00 | 0.00 | 0.00 | 4.02 |
4171 | 9353 | 7.550196 | ACATGTCATTCTTTGTTCAAGCTTTTT | 59.450 | 29.630 | 0.00 | 0.00 | 31.70 | 1.94 |
4199 | 9382 | 1.014564 | GCGCCGCTTTGTAGAAGACT | 61.015 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
4200 | 9383 | 0.716108 | CGCCGCTTTGTAGAAGACTG | 59.284 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4206 | 9389 | 2.159234 | GCTTTGTAGAAGACTGCAGCAG | 59.841 | 50.000 | 21.54 | 21.54 | 39.62 | 4.24 |
4219 | 9402 | 3.047796 | CTGCAGCAGCTGTAAAAACAAG | 58.952 | 45.455 | 23.60 | 1.82 | 42.74 | 3.16 |
4255 | 9439 | 5.529060 | CCATGTCAGGTCCTTAATTAGCTTC | 59.471 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4260 | 9444 | 6.823689 | GTCAGGTCCTTAATTAGCTTCATTCA | 59.176 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
4265 | 9474 | 7.420800 | GTCCTTAATTAGCTTCATTCACATGG | 58.579 | 38.462 | 0.00 | 0.00 | 0.00 | 3.66 |
4288 | 9500 | 7.095910 | TGGTTTGCTCATGTTGGTTTTATATG | 58.904 | 34.615 | 0.00 | 0.00 | 0.00 | 1.78 |
4289 | 9501 | 6.035975 | GGTTTGCTCATGTTGGTTTTATATGC | 59.964 | 38.462 | 0.00 | 0.00 | 0.00 | 3.14 |
4290 | 9502 | 5.911378 | TGCTCATGTTGGTTTTATATGCA | 57.089 | 34.783 | 0.00 | 0.00 | 0.00 | 3.96 |
4355 | 9584 | 5.602458 | TCTACGTACATGCCTAGTATTCG | 57.398 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
4363 | 9709 | 1.269444 | GCCTAGTATTCGACAGCGCG | 61.269 | 60.000 | 0.00 | 0.00 | 37.46 | 6.86 |
4402 | 9748 | 1.180029 | AATGCGGCATGCTTCTCTTT | 58.820 | 45.000 | 17.43 | 6.09 | 46.63 | 2.52 |
4415 | 9762 | 7.919621 | GCATGCTTCTCTTTATAGAAAAATGCT | 59.080 | 33.333 | 11.37 | 0.00 | 43.19 | 3.79 |
4427 | 9774 | 1.972872 | AAAATGCTAGATGGAGGCCG | 58.027 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
4439 | 9786 | 4.467438 | AGATGGAGGCCGAATTTCAAAAAT | 59.533 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
4499 | 9862 | 7.837689 | ACACCTATACCTAGAGACACATTACAA | 59.162 | 37.037 | 0.00 | 0.00 | 0.00 | 2.41 |
4503 | 9866 | 7.735326 | ATACCTAGAGACACATTACAACCTT | 57.265 | 36.000 | 0.00 | 0.00 | 0.00 | 3.50 |
4627 | 10023 | 7.696992 | AAAATTATTTTCTTAGCCTGACCGA | 57.303 | 32.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4628 | 10024 | 6.927294 | AATTATTTTCTTAGCCTGACCGAG | 57.073 | 37.500 | 0.00 | 0.00 | 0.00 | 4.63 |
4629 | 10025 | 3.983044 | ATTTTCTTAGCCTGACCGAGT | 57.017 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
4630 | 10026 | 3.314541 | TTTTCTTAGCCTGACCGAGTC | 57.685 | 47.619 | 0.00 | 0.00 | 0.00 | 3.36 |
4631 | 10027 | 1.919240 | TTCTTAGCCTGACCGAGTCA | 58.081 | 50.000 | 6.57 | 6.57 | 40.50 | 3.41 |
4632 | 10028 | 1.919240 | TCTTAGCCTGACCGAGTCAA | 58.081 | 50.000 | 7.90 | 0.00 | 42.26 | 3.18 |
4633 | 10029 | 2.457598 | TCTTAGCCTGACCGAGTCAAT | 58.542 | 47.619 | 7.90 | 1.54 | 42.26 | 2.57 |
4634 | 10030 | 3.628008 | TCTTAGCCTGACCGAGTCAATA | 58.372 | 45.455 | 7.90 | 0.79 | 42.26 | 1.90 |
4635 | 10031 | 3.632604 | TCTTAGCCTGACCGAGTCAATAG | 59.367 | 47.826 | 7.90 | 2.55 | 42.26 | 1.73 |
4636 | 10032 | 2.145397 | AGCCTGACCGAGTCAATAGA | 57.855 | 50.000 | 7.90 | 0.00 | 42.26 | 1.98 |
4637 | 10033 | 2.457598 | AGCCTGACCGAGTCAATAGAA | 58.542 | 47.619 | 7.90 | 0.00 | 42.26 | 2.10 |
4638 | 10034 | 2.832129 | AGCCTGACCGAGTCAATAGAAA | 59.168 | 45.455 | 7.90 | 0.00 | 42.26 | 2.52 |
4639 | 10035 | 3.260884 | AGCCTGACCGAGTCAATAGAAAA | 59.739 | 43.478 | 7.90 | 0.00 | 42.26 | 2.29 |
4640 | 10036 | 4.000988 | GCCTGACCGAGTCAATAGAAAAA | 58.999 | 43.478 | 7.90 | 0.00 | 42.26 | 1.94 |
4641 | 10037 | 4.636206 | GCCTGACCGAGTCAATAGAAAAAT | 59.364 | 41.667 | 7.90 | 0.00 | 42.26 | 1.82 |
4642 | 10038 | 5.815740 | GCCTGACCGAGTCAATAGAAAAATA | 59.184 | 40.000 | 7.90 | 0.00 | 42.26 | 1.40 |
4643 | 10039 | 6.483640 | GCCTGACCGAGTCAATAGAAAAATAT | 59.516 | 38.462 | 7.90 | 0.00 | 42.26 | 1.28 |
4644 | 10040 | 7.656137 | GCCTGACCGAGTCAATAGAAAAATATA | 59.344 | 37.037 | 7.90 | 0.00 | 42.26 | 0.86 |
4645 | 10041 | 9.712305 | CCTGACCGAGTCAATAGAAAAATATAT | 57.288 | 33.333 | 7.90 | 0.00 | 42.26 | 0.86 |
4676 | 10072 | 4.079253 | GGTCTGGCCAAGTCAATAGAAAA | 58.921 | 43.478 | 7.01 | 0.00 | 37.17 | 2.29 |
4807 | 10244 | 5.153950 | ACTTAGGACAGAGCTAAACCTTG | 57.846 | 43.478 | 6.55 | 4.24 | 32.90 | 3.61 |
4869 | 10316 | 3.064820 | CCGCAAACGCCTCATAAATTAGT | 59.935 | 43.478 | 0.00 | 0.00 | 38.22 | 2.24 |
4909 | 10357 | 9.416794 | CATAAGATTATCTTACACACTAGGCAG | 57.583 | 37.037 | 15.88 | 0.00 | 41.27 | 4.85 |
4926 | 10374 | 5.690997 | AGGCAGTTTTACTTTACTTGCTC | 57.309 | 39.130 | 0.00 | 0.00 | 0.00 | 4.26 |
4945 | 10393 | 4.201960 | TGCTCTTACACACAAAATCGCAAA | 60.202 | 37.500 | 0.00 | 0.00 | 0.00 | 3.68 |
4990 | 10444 | 2.334977 | TGCCAACCAAGTTCTCTAGGA | 58.665 | 47.619 | 0.00 | 0.00 | 0.00 | 2.94 |
4993 | 10447 | 3.173965 | CCAACCAAGTTCTCTAGGAGGA | 58.826 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
5050 | 10505 | 1.434696 | GGTTCATGCCGAAGCCATG | 59.565 | 57.895 | 4.30 | 0.00 | 44.72 | 3.66 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
96 | 99 | 3.925238 | CGCCATCGTTGTAGCCGC | 61.925 | 66.667 | 0.00 | 0.00 | 0.00 | 6.53 |
108 | 111 | 3.132925 | GCAAAAATAATCATGGCGCCAT | 58.867 | 40.909 | 36.10 | 36.10 | 37.08 | 4.40 |
268 | 272 | 7.132213 | CGTTCATATCGTTCCAGCAAAAATAT | 58.868 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
310 | 3311 | 6.795144 | TGATATGGTTCCAGCAAAAATGAT | 57.205 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
342 | 3408 | 3.902881 | AGCAAAAACACATGGTTCCAA | 57.097 | 38.095 | 0.00 | 0.00 | 39.29 | 3.53 |
421 | 3487 | 0.040692 | TCTTGTCGTCGGTTGACTCG | 60.041 | 55.000 | 0.00 | 0.00 | 43.21 | 4.18 |
432 | 3498 | 2.374184 | CATCTCTCCTCCTCTTGTCGT | 58.626 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
438 | 3504 | 1.152567 | CCGGCATCTCTCCTCCTCT | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
504 | 3895 | 2.143419 | GCATCTCCATCCCCCGTCT | 61.143 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
513 | 3904 | 2.028778 | GAGCTCGCGCATCTCCAT | 59.971 | 61.111 | 8.75 | 0.00 | 39.10 | 3.41 |
514 | 3905 | 3.451894 | TGAGCTCGCGCATCTCCA | 61.452 | 61.111 | 8.75 | 0.00 | 39.10 | 3.86 |
652 | 4046 | 1.309499 | CGAGCACGGGCCCAAATTTA | 61.309 | 55.000 | 24.92 | 0.00 | 42.56 | 1.40 |
664 | 4058 | 2.973224 | GCATTTATTTATGGCGAGCACG | 59.027 | 45.455 | 0.00 | 0.00 | 42.93 | 5.34 |
669 | 4063 | 2.096466 | CGCTCGCATTTATTTATGGCGA | 60.096 | 45.455 | 6.85 | 6.85 | 36.48 | 5.54 |
670 | 4064 | 2.233355 | CGCTCGCATTTATTTATGGCG | 58.767 | 47.619 | 0.00 | 0.00 | 31.16 | 5.69 |
671 | 4065 | 1.978782 | GCGCTCGCATTTATTTATGGC | 59.021 | 47.619 | 9.59 | 0.00 | 41.49 | 4.40 |
672 | 4066 | 2.031245 | TGGCGCTCGCATTTATTTATGG | 60.031 | 45.455 | 16.36 | 0.00 | 44.11 | 2.74 |
673 | 4067 | 2.973224 | GTGGCGCTCGCATTTATTTATG | 59.027 | 45.455 | 16.36 | 0.00 | 44.11 | 1.90 |
674 | 4068 | 2.031157 | GGTGGCGCTCGCATTTATTTAT | 60.031 | 45.455 | 16.36 | 0.00 | 44.11 | 1.40 |
675 | 4069 | 1.332375 | GGTGGCGCTCGCATTTATTTA | 59.668 | 47.619 | 16.36 | 0.00 | 44.11 | 1.40 |
676 | 4070 | 0.100503 | GGTGGCGCTCGCATTTATTT | 59.899 | 50.000 | 16.36 | 0.00 | 44.11 | 1.40 |
677 | 4071 | 1.724582 | GGGTGGCGCTCGCATTTATT | 61.725 | 55.000 | 16.36 | 0.00 | 44.11 | 1.40 |
678 | 4072 | 2.186826 | GGGTGGCGCTCGCATTTAT | 61.187 | 57.895 | 16.36 | 0.00 | 44.11 | 1.40 |
679 | 4073 | 2.822255 | GGGTGGCGCTCGCATTTA | 60.822 | 61.111 | 16.36 | 0.00 | 44.11 | 1.40 |
680 | 4074 | 4.722700 | AGGGTGGCGCTCGCATTT | 62.723 | 61.111 | 16.36 | 0.00 | 44.11 | 2.32 |
695 | 4089 | 0.995024 | GATATCCCCATCCCACCAGG | 59.005 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
696 | 4090 | 1.746157 | TGATATCCCCATCCCACCAG | 58.254 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
697 | 4091 | 2.379567 | CAATGATATCCCCATCCCACCA | 59.620 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
698 | 4092 | 2.379907 | ACAATGATATCCCCATCCCACC | 59.620 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
699 | 4093 | 3.562176 | GGACAATGATATCCCCATCCCAC | 60.562 | 52.174 | 0.00 | 0.00 | 0.00 | 4.61 |
700 | 4094 | 2.649312 | GGACAATGATATCCCCATCCCA | 59.351 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
701 | 4095 | 3.372440 | GGACAATGATATCCCCATCCC | 57.628 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
708 | 4102 | 5.779241 | TGATTAGGGGGACAATGATATCC | 57.221 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
709 | 4103 | 6.069440 | TGGATGATTAGGGGGACAATGATATC | 60.069 | 42.308 | 0.00 | 0.00 | 0.00 | 1.63 |
710 | 4104 | 5.797457 | TGGATGATTAGGGGGACAATGATAT | 59.203 | 40.000 | 0.00 | 0.00 | 0.00 | 1.63 |
711 | 4105 | 5.169438 | TGGATGATTAGGGGGACAATGATA | 58.831 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
712 | 4106 | 3.989558 | TGGATGATTAGGGGGACAATGAT | 59.010 | 43.478 | 0.00 | 0.00 | 0.00 | 2.45 |
713 | 4107 | 3.402353 | TGGATGATTAGGGGGACAATGA | 58.598 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
714 | 4108 | 3.882102 | TGGATGATTAGGGGGACAATG | 57.118 | 47.619 | 0.00 | 0.00 | 0.00 | 2.82 |
715 | 4109 | 3.117131 | GGTTGGATGATTAGGGGGACAAT | 60.117 | 47.826 | 0.00 | 0.00 | 0.00 | 2.71 |
716 | 4110 | 2.243736 | GGTTGGATGATTAGGGGGACAA | 59.756 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
717 | 4111 | 1.850345 | GGTTGGATGATTAGGGGGACA | 59.150 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
718 | 4112 | 1.850345 | TGGTTGGATGATTAGGGGGAC | 59.150 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
719 | 4113 | 1.850345 | GTGGTTGGATGATTAGGGGGA | 59.150 | 52.381 | 0.00 | 0.00 | 0.00 | 4.81 |
720 | 4114 | 1.568597 | TGTGGTTGGATGATTAGGGGG | 59.431 | 52.381 | 0.00 | 0.00 | 0.00 | 5.40 |
721 | 4115 | 3.225104 | CATGTGGTTGGATGATTAGGGG | 58.775 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
722 | 4116 | 3.902218 | ACATGTGGTTGGATGATTAGGG | 58.098 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
734 | 4128 | 1.076024 | AGGCCTGATCAACATGTGGTT | 59.924 | 47.619 | 3.11 | 0.00 | 41.47 | 3.67 |
735 | 4129 | 0.700564 | AGGCCTGATCAACATGTGGT | 59.299 | 50.000 | 3.11 | 0.00 | 0.00 | 4.16 |
736 | 4130 | 2.715749 | TAGGCCTGATCAACATGTGG | 57.284 | 50.000 | 17.99 | 0.00 | 0.00 | 4.17 |
737 | 4131 | 2.882761 | CCATAGGCCTGATCAACATGTG | 59.117 | 50.000 | 17.99 | 0.00 | 0.00 | 3.21 |
738 | 4132 | 2.750807 | GCCATAGGCCTGATCAACATGT | 60.751 | 50.000 | 17.99 | 0.00 | 44.06 | 3.21 |
739 | 4133 | 1.884579 | GCCATAGGCCTGATCAACATG | 59.115 | 52.381 | 17.99 | 9.11 | 44.06 | 3.21 |
740 | 4134 | 2.283145 | GCCATAGGCCTGATCAACAT | 57.717 | 50.000 | 17.99 | 0.00 | 44.06 | 2.71 |
741 | 4135 | 3.806941 | GCCATAGGCCTGATCAACA | 57.193 | 52.632 | 17.99 | 0.00 | 44.06 | 3.33 |
752 | 4146 | 1.135689 | GCACAAAACGTCTGCCATAGG | 60.136 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
753 | 4147 | 1.535028 | TGCACAAAACGTCTGCCATAG | 59.465 | 47.619 | 0.00 | 0.00 | 0.00 | 2.23 |
754 | 4148 | 1.265635 | GTGCACAAAACGTCTGCCATA | 59.734 | 47.619 | 13.17 | 0.00 | 0.00 | 2.74 |
755 | 4149 | 0.030638 | GTGCACAAAACGTCTGCCAT | 59.969 | 50.000 | 13.17 | 0.00 | 0.00 | 4.40 |
756 | 4150 | 1.431440 | GTGCACAAAACGTCTGCCA | 59.569 | 52.632 | 13.17 | 0.00 | 0.00 | 4.92 |
757 | 4151 | 1.654137 | CGTGCACAAAACGTCTGCC | 60.654 | 57.895 | 18.64 | 0.00 | 36.31 | 4.85 |
758 | 4152 | 0.654472 | CTCGTGCACAAAACGTCTGC | 60.654 | 55.000 | 18.64 | 0.00 | 41.70 | 4.26 |
759 | 4153 | 0.654472 | GCTCGTGCACAAAACGTCTG | 60.654 | 55.000 | 18.64 | 0.00 | 41.70 | 3.51 |
760 | 4154 | 1.641677 | GCTCGTGCACAAAACGTCT | 59.358 | 52.632 | 18.64 | 0.00 | 41.70 | 4.18 |
761 | 4155 | 1.717728 | CGCTCGTGCACAAAACGTC | 60.718 | 57.895 | 18.64 | 0.00 | 41.70 | 4.34 |
762 | 4156 | 2.323105 | CGCTCGTGCACAAAACGT | 59.677 | 55.556 | 18.64 | 0.00 | 41.70 | 3.99 |
763 | 4157 | 1.823260 | TACCGCTCGTGCACAAAACG | 61.823 | 55.000 | 18.64 | 13.93 | 42.36 | 3.60 |
770 | 4164 | 2.151881 | TTTTAACTACCGCTCGTGCA | 57.848 | 45.000 | 10.43 | 0.00 | 39.64 | 4.57 |
807 | 4201 | 7.042254 | ACACGCGTCTAATTCTTAGTTTTTCTT | 60.042 | 33.333 | 9.86 | 0.00 | 34.81 | 2.52 |
808 | 4202 | 6.423001 | ACACGCGTCTAATTCTTAGTTTTTCT | 59.577 | 34.615 | 9.86 | 0.00 | 34.81 | 2.52 |
810 | 4204 | 6.535274 | ACACGCGTCTAATTCTTAGTTTTT | 57.465 | 33.333 | 9.86 | 0.00 | 34.81 | 1.94 |
815 | 4209 | 4.581493 | TCGTACACGCGTCTAATTCTTAG | 58.419 | 43.478 | 9.86 | 0.00 | 39.60 | 2.18 |
871 | 4273 | 9.088512 | CGAAGAAGTTTGCTAGTACTATGAAAT | 57.911 | 33.333 | 2.33 | 0.00 | 0.00 | 2.17 |
893 | 4295 | 0.231279 | CGACGGTGTTCCAAACGAAG | 59.769 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
915 | 4317 | 4.673298 | ATTGGCCGTGCGTGTCGA | 62.673 | 61.111 | 0.00 | 0.00 | 0.00 | 4.20 |
916 | 4318 | 4.147322 | GATTGGCCGTGCGTGTCG | 62.147 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
917 | 4319 | 2.740714 | GAGATTGGCCGTGCGTGTC | 61.741 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
937 | 4340 | 1.609840 | GAGACAACGTCGCTCACTGC | 61.610 | 60.000 | 7.22 | 0.00 | 37.67 | 4.40 |
960 | 4363 | 4.753662 | TCGGAGGGACCCAGACGG | 62.754 | 72.222 | 14.60 | 8.28 | 34.64 | 4.79 |
961 | 4364 | 3.450115 | GTCGGAGGGACCCAGACG | 61.450 | 72.222 | 14.60 | 13.92 | 39.90 | 4.18 |
1037 | 4440 | 2.821366 | GGACGGAGAGTACGGCGA | 60.821 | 66.667 | 16.62 | 0.00 | 41.14 | 5.54 |
1044 | 4453 | 1.208844 | TGAGGAGGAGGACGGAGAGT | 61.209 | 60.000 | 0.00 | 0.00 | 0.00 | 3.24 |
1120 | 4532 | 1.050988 | ATCGAGACATGGGTGGGAGG | 61.051 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1127 | 4539 | 2.923121 | ACCAATCAATCGAGACATGGG | 58.077 | 47.619 | 0.00 | 3.67 | 34.04 | 4.00 |
1133 | 4545 | 4.245660 | GTCAGTCAACCAATCAATCGAGA | 58.754 | 43.478 | 0.00 | 0.00 | 0.00 | 4.04 |
1146 | 4558 | 2.052782 | ACCCAAACCTGTCAGTCAAC | 57.947 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1150 | 4562 | 0.629058 | ACCAACCCAAACCTGTCAGT | 59.371 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1156 | 4568 | 1.960689 | CGAATCAACCAACCCAAACCT | 59.039 | 47.619 | 0.00 | 0.00 | 0.00 | 3.50 |
1158 | 4570 | 1.000394 | CCCGAATCAACCAACCCAAAC | 60.000 | 52.381 | 0.00 | 0.00 | 0.00 | 2.93 |
1160 | 4572 | 1.182385 | GCCCGAATCAACCAACCCAA | 61.182 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
1161 | 4573 | 1.605165 | GCCCGAATCAACCAACCCA | 60.605 | 57.895 | 0.00 | 0.00 | 0.00 | 4.51 |
1162 | 4574 | 1.304134 | AGCCCGAATCAACCAACCC | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 4.11 |
1163 | 4575 | 1.883021 | CAGCCCGAATCAACCAACC | 59.117 | 57.895 | 0.00 | 0.00 | 0.00 | 3.77 |
1164 | 4576 | 1.212751 | GCAGCCCGAATCAACCAAC | 59.787 | 57.895 | 0.00 | 0.00 | 0.00 | 3.77 |
1165 | 4577 | 1.228398 | TGCAGCCCGAATCAACCAA | 60.228 | 52.632 | 0.00 | 0.00 | 0.00 | 3.67 |
1168 | 4580 | 2.409870 | CCCTGCAGCCCGAATCAAC | 61.410 | 63.158 | 8.66 | 0.00 | 0.00 | 3.18 |
1172 | 4584 | 1.454479 | CAATCCCTGCAGCCCGAAT | 60.454 | 57.895 | 8.66 | 0.00 | 0.00 | 3.34 |
1177 | 4589 | 3.743017 | TCCCCAATCCCTGCAGCC | 61.743 | 66.667 | 8.66 | 0.00 | 0.00 | 4.85 |
1179 | 4591 | 2.276740 | GGTCCCCAATCCCTGCAG | 59.723 | 66.667 | 6.78 | 6.78 | 0.00 | 4.41 |
1180 | 4592 | 2.534011 | TGGTCCCCAATCCCTGCA | 60.534 | 61.111 | 0.00 | 0.00 | 0.00 | 4.41 |
1305 | 4760 | 0.965439 | GCAGCTATGGAGACGAGGAT | 59.035 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
1316 | 4771 | 8.563127 | AACTAGAGAGTCAAGCTGCAGCTATG | 62.563 | 46.154 | 39.78 | 33.53 | 42.85 | 2.23 |
1317 | 4772 | 6.620139 | AACTAGAGAGTCAAGCTGCAGCTAT | 61.620 | 44.000 | 39.78 | 26.09 | 42.85 | 2.97 |
1336 | 4794 | 4.211164 | TGAACACAAATGAGCACGAACTAG | 59.789 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
1338 | 4796 | 2.942376 | TGAACACAAATGAGCACGAACT | 59.058 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
1339 | 4797 | 3.002246 | TCTGAACACAAATGAGCACGAAC | 59.998 | 43.478 | 0.00 | 0.00 | 0.00 | 3.95 |
1340 | 4798 | 3.202097 | TCTGAACACAAATGAGCACGAA | 58.798 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
1342 | 4800 | 2.802247 | TCTCTGAACACAAATGAGCACG | 59.198 | 45.455 | 0.00 | 0.00 | 0.00 | 5.34 |
1349 | 4807 | 5.335191 | GCTTCCGATTTCTCTGAACACAAAT | 60.335 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
1422 | 4880 | 3.508744 | AAAACTGTGCTGGTTGAAGTG | 57.491 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
1441 | 4899 | 9.072375 | TGTACAGATGGACAAATATGACAAAAA | 57.928 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
1493 | 4952 | 8.385898 | TGGTTAGTGGATTTTACAACAGTTAG | 57.614 | 34.615 | 0.00 | 0.00 | 0.00 | 2.34 |
1561 | 5020 | 1.688197 | ACCTGACCTTGTTGCAAATGG | 59.312 | 47.619 | 0.00 | 6.39 | 0.00 | 3.16 |
1603 | 5062 | 3.626670 | GCAGAGGAAAGAACATCATCAGG | 59.373 | 47.826 | 0.00 | 0.00 | 30.33 | 3.86 |
1604 | 5063 | 4.333095 | CAGCAGAGGAAAGAACATCATCAG | 59.667 | 45.833 | 0.00 | 0.00 | 30.33 | 2.90 |
1628 | 5087 | 7.415592 | TGAATATCTCTATCTACCCAGCATG | 57.584 | 40.000 | 0.00 | 0.00 | 0.00 | 4.06 |
1645 | 5107 | 3.015327 | GCAGGCAGGGATGATGAATATC | 58.985 | 50.000 | 0.00 | 0.00 | 0.00 | 1.63 |
1671 | 5135 | 4.125703 | TGCAAAAACAAATTACCAGGCAG | 58.874 | 39.130 | 0.00 | 0.00 | 0.00 | 4.85 |
1672 | 5136 | 4.125703 | CTGCAAAAACAAATTACCAGGCA | 58.874 | 39.130 | 0.00 | 0.00 | 0.00 | 4.75 |
1673 | 5137 | 3.498018 | CCTGCAAAAACAAATTACCAGGC | 59.502 | 43.478 | 0.00 | 0.00 | 33.09 | 4.85 |
1674 | 5138 | 4.511082 | CACCTGCAAAAACAAATTACCAGG | 59.489 | 41.667 | 0.00 | 0.00 | 43.16 | 4.45 |
1715 | 5179 | 1.344942 | CGATGTTATAGCCGCCGCTC | 61.345 | 60.000 | 1.83 | 0.00 | 43.95 | 5.03 |
1758 | 5230 | 5.200483 | TCTTGAACAAAATGACAGAAGGGT | 58.800 | 37.500 | 0.00 | 0.00 | 0.00 | 4.34 |
1759 | 5231 | 5.772825 | TCTTGAACAAAATGACAGAAGGG | 57.227 | 39.130 | 0.00 | 0.00 | 0.00 | 3.95 |
1763 | 5235 | 7.572523 | ACTGATTCTTGAACAAAATGACAGA | 57.427 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1814 | 5337 | 3.999663 | ACAAACTAGAGCAGAATCAGCAC | 59.000 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
1901 | 5424 | 1.347378 | TCACAATACTGGAGCACTGCA | 59.653 | 47.619 | 3.30 | 0.00 | 0.00 | 4.41 |
1969 | 5499 | 6.682863 | CGAATAAGTCTGAAAGCCGTTTATTG | 59.317 | 38.462 | 0.00 | 0.00 | 0.00 | 1.90 |
1974 | 5504 | 3.660865 | ACGAATAAGTCTGAAAGCCGTT | 58.339 | 40.909 | 0.00 | 0.00 | 0.00 | 4.44 |
1976 | 5506 | 4.151689 | TGAAACGAATAAGTCTGAAAGCCG | 59.848 | 41.667 | 0.00 | 0.00 | 0.00 | 5.52 |
1999 | 5529 | 2.529389 | GTGGTGGGACTGGGAGGT | 60.529 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
2002 | 5532 | 0.120377 | AATAGGTGGTGGGACTGGGA | 59.880 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2003 | 5533 | 0.255890 | CAATAGGTGGTGGGACTGGG | 59.744 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
2004 | 5534 | 0.991920 | ACAATAGGTGGTGGGACTGG | 59.008 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2005 | 5535 | 3.808728 | CATACAATAGGTGGTGGGACTG | 58.191 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2006 | 5536 | 2.172717 | GCATACAATAGGTGGTGGGACT | 59.827 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2007 | 5537 | 2.092646 | TGCATACAATAGGTGGTGGGAC | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2122 | 5833 | 9.394477 | GTTTCAAAAGTATGACCTTGTATGAAC | 57.606 | 33.333 | 0.00 | 0.00 | 29.55 | 3.18 |
2144 | 5856 | 5.649831 | AGGCCTACTCATCATTGAAAGTTTC | 59.350 | 40.000 | 1.29 | 8.75 | 0.00 | 2.78 |
2185 | 5904 | 7.605449 | ACTGCACAAAAACTGAATAGCAATAT | 58.395 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
2186 | 5905 | 6.980593 | ACTGCACAAAAACTGAATAGCAATA | 58.019 | 32.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2187 | 5906 | 5.846203 | ACTGCACAAAAACTGAATAGCAAT | 58.154 | 33.333 | 0.00 | 0.00 | 0.00 | 3.56 |
2188 | 5907 | 5.261209 | ACTGCACAAAAACTGAATAGCAA | 57.739 | 34.783 | 0.00 | 0.00 | 0.00 | 3.91 |
2221 | 5940 | 7.397892 | TGACCTGTTAGAAGAAGTATCAGAG | 57.602 | 40.000 | 0.00 | 0.00 | 0.00 | 3.35 |
2319 | 6051 | 9.838339 | AACAAACTGGATATTAGTTGGAGATAG | 57.162 | 33.333 | 12.59 | 0.00 | 38.32 | 2.08 |
2364 | 6104 | 2.017049 | GCCAGTCTGTTGTTGAGTTGT | 58.983 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
2370 | 6110 | 6.017400 | AGATAATTTGCCAGTCTGTTGTTG | 57.983 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
2463 | 6286 | 6.822667 | TTGAATGGCATTAGCATATACCTG | 57.177 | 37.500 | 13.65 | 0.00 | 44.61 | 4.00 |
2538 | 6361 | 5.261040 | TCAGGGATTTCTCCAAACATCTT | 57.739 | 39.130 | 0.00 | 0.00 | 44.08 | 2.40 |
2543 | 6366 | 3.511146 | TGCATTCAGGGATTTCTCCAAAC | 59.489 | 43.478 | 0.00 | 0.00 | 44.08 | 2.93 |
2550 | 6375 | 5.591877 | ACTGATAGTTGCATTCAGGGATTTC | 59.408 | 40.000 | 16.19 | 0.00 | 40.92 | 2.17 |
2588 | 6413 | 9.369904 | GGCTTCATGAACACATTTTAATACATT | 57.630 | 29.630 | 3.38 | 0.00 | 0.00 | 2.71 |
2590 | 6415 | 7.178274 | AGGGCTTCATGAACACATTTTAATACA | 59.822 | 33.333 | 3.38 | 0.00 | 0.00 | 2.29 |
2591 | 6416 | 7.489113 | CAGGGCTTCATGAACACATTTTAATAC | 59.511 | 37.037 | 3.38 | 0.00 | 0.00 | 1.89 |
2592 | 6417 | 7.395772 | TCAGGGCTTCATGAACACATTTTAATA | 59.604 | 33.333 | 3.38 | 0.00 | 0.00 | 0.98 |
2593 | 6418 | 6.211184 | TCAGGGCTTCATGAACACATTTTAAT | 59.789 | 34.615 | 3.38 | 0.00 | 0.00 | 1.40 |
2594 | 6419 | 5.538053 | TCAGGGCTTCATGAACACATTTTAA | 59.462 | 36.000 | 3.38 | 0.00 | 0.00 | 1.52 |
2596 | 6421 | 3.896888 | TCAGGGCTTCATGAACACATTTT | 59.103 | 39.130 | 3.38 | 0.00 | 0.00 | 1.82 |
2597 | 6422 | 3.499338 | TCAGGGCTTCATGAACACATTT | 58.501 | 40.909 | 3.38 | 0.00 | 0.00 | 2.32 |
2601 | 6426 | 2.440409 | ACATCAGGGCTTCATGAACAC | 58.560 | 47.619 | 3.38 | 3.17 | 0.00 | 3.32 |
2623 | 6448 | 3.672211 | AGAAGGGGGATACGGGAAATTA | 58.328 | 45.455 | 0.00 | 0.00 | 37.60 | 1.40 |
2625 | 6450 | 2.207926 | AGAAGGGGGATACGGGAAAT | 57.792 | 50.000 | 0.00 | 0.00 | 37.60 | 2.17 |
2655 | 6480 | 5.484290 | ACAATGTTAGGAGGTAGCTACAGTT | 59.516 | 40.000 | 24.75 | 10.07 | 0.00 | 3.16 |
2686 | 6514 | 6.145535 | CAGAAAATACCAGACTGCAGAAAAC | 58.854 | 40.000 | 23.35 | 8.67 | 0.00 | 2.43 |
2775 | 6603 | 2.038557 | AGTTTGGGACATGACTAAGCGT | 59.961 | 45.455 | 0.00 | 0.00 | 39.30 | 5.07 |
2882 | 6828 | 4.006989 | TCACCGTTGGGATTTTGATGTAG | 58.993 | 43.478 | 0.00 | 0.00 | 36.97 | 2.74 |
2918 | 6864 | 0.179134 | GGGACGATGACCTCACGAAG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2972 | 6918 | 5.064707 | CAGGTTCGGTTATCAAATGGTACTG | 59.935 | 44.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2977 | 6923 | 2.752354 | TGCAGGTTCGGTTATCAAATGG | 59.248 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
2983 | 6929 | 4.499037 | AAAAAGTGCAGGTTCGGTTATC | 57.501 | 40.909 | 0.00 | 0.00 | 0.00 | 1.75 |
3050 | 7004 | 2.730934 | ACATGAGCCTCATCAATGCT | 57.269 | 45.000 | 3.68 | 0.00 | 34.28 | 3.79 |
3054 | 7008 | 6.496218 | ACTCAGATATACATGAGCCTCATCAA | 59.504 | 38.462 | 3.68 | 0.00 | 45.56 | 2.57 |
3102 | 7056 | 9.884465 | CAAACCTCTTGTTAATAACTTCTGAAG | 57.116 | 33.333 | 15.59 | 15.59 | 35.67 | 3.02 |
3148 | 7249 | 9.066892 | ACACACACAATAGAACATGAAACTAAT | 57.933 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
3149 | 7250 | 8.445275 | ACACACACAATAGAACATGAAACTAA | 57.555 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
3213 | 7325 | 6.300354 | AGTTGAAAGCTACACACACATTAC | 57.700 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
3300 | 7412 | 5.246307 | ACTGCTCTGGTTTAGTTCCATAAC | 58.754 | 41.667 | 0.00 | 0.00 | 34.26 | 1.89 |
3302 | 7414 | 6.808321 | ATACTGCTCTGGTTTAGTTCCATA | 57.192 | 37.500 | 0.00 | 0.00 | 34.26 | 2.74 |
3303 | 7415 | 5.700402 | ATACTGCTCTGGTTTAGTTCCAT | 57.300 | 39.130 | 0.00 | 0.00 | 34.26 | 3.41 |
3331 | 7443 | 9.113838 | CACATTTTCAGTGGCTAAGAATATACT | 57.886 | 33.333 | 0.00 | 0.00 | 33.43 | 2.12 |
3332 | 7444 | 9.109393 | TCACATTTTCAGTGGCTAAGAATATAC | 57.891 | 33.333 | 0.00 | 0.00 | 37.58 | 1.47 |
3431 | 7545 | 4.250464 | TGTAGGTAGCATTTCTTTCACCG | 58.750 | 43.478 | 0.00 | 0.00 | 0.00 | 4.94 |
3459 | 7573 | 2.370281 | TTCTCTAAGCTGCTGAACCG | 57.630 | 50.000 | 1.35 | 0.00 | 0.00 | 4.44 |
3500 | 7614 | 5.528870 | CGATTTTAGGCTTTTGTCAACCTT | 58.471 | 37.500 | 0.00 | 0.00 | 33.60 | 3.50 |
3501 | 7615 | 4.558697 | GCGATTTTAGGCTTTTGTCAACCT | 60.559 | 41.667 | 0.00 | 0.00 | 36.27 | 3.50 |
3502 | 7616 | 3.673338 | GCGATTTTAGGCTTTTGTCAACC | 59.327 | 43.478 | 0.00 | 0.00 | 0.00 | 3.77 |
3564 | 7803 | 5.001232 | TCTTTCCAACTTATACAGTGCACC | 58.999 | 41.667 | 14.63 | 0.00 | 35.12 | 5.01 |
3583 | 7822 | 7.770897 | AGGCGAAGTACATTCTGATATTTCTTT | 59.229 | 33.333 | 0.00 | 0.00 | 35.61 | 2.52 |
3595 | 7834 | 3.433615 | GGCATCATAGGCGAAGTACATTC | 59.566 | 47.826 | 0.00 | 0.00 | 34.31 | 2.67 |
3626 | 8780 | 8.408043 | TGCACATCATATTAGGGGAAAATAAG | 57.592 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
3627 | 8781 | 8.004215 | ACTGCACATCATATTAGGGGAAAATAA | 58.996 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3628 | 8782 | 7.526041 | ACTGCACATCATATTAGGGGAAAATA | 58.474 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
3629 | 8783 | 6.376248 | ACTGCACATCATATTAGGGGAAAAT | 58.624 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3665 | 8820 | 2.410469 | CCGGGGTATGACGACGAC | 59.590 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
3700 | 8855 | 5.869579 | TCAAAGGCTCCATCAGGATAATAC | 58.130 | 41.667 | 0.00 | 0.00 | 44.70 | 1.89 |
3757 | 8912 | 7.358765 | CGACTAGTTGAACATGAAGAACAGAAG | 60.359 | 40.741 | 3.81 | 1.45 | 0.00 | 2.85 |
3760 | 8915 | 5.920840 | TCGACTAGTTGAACATGAAGAACAG | 59.079 | 40.000 | 10.57 | 2.52 | 0.00 | 3.16 |
3774 | 8929 | 4.148348 | CCTCGAAACTTTGTCGACTAGTTG | 59.852 | 45.833 | 26.25 | 18.66 | 42.31 | 3.16 |
3785 | 8957 | 3.568538 | CAGAAATGGCCTCGAAACTTTG | 58.431 | 45.455 | 3.32 | 0.00 | 0.00 | 2.77 |
3786 | 8958 | 2.029918 | GCAGAAATGGCCTCGAAACTTT | 60.030 | 45.455 | 3.32 | 0.00 | 0.00 | 2.66 |
3799 | 8971 | 0.392193 | AGGGTCAGCGAGCAGAAATG | 60.392 | 55.000 | 9.33 | 0.00 | 0.00 | 2.32 |
3810 | 8982 | 0.529378 | CAAATCTTGCCAGGGTCAGC | 59.471 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
3830 | 9002 | 4.190001 | CTGATACAGCTTTGTCTGCAGAT | 58.810 | 43.478 | 21.47 | 3.30 | 37.59 | 2.90 |
3883 | 9055 | 4.394712 | CTTGACTCGCCCGGCCTT | 62.395 | 66.667 | 3.10 | 0.00 | 0.00 | 4.35 |
3906 | 9078 | 2.997315 | TGACCTCCTGGCACGGAG | 60.997 | 66.667 | 19.87 | 19.87 | 44.51 | 4.63 |
3909 | 9081 | 3.314331 | AGGTGACCTCCTGGCACG | 61.314 | 66.667 | 0.00 | 0.00 | 39.54 | 5.34 |
4086 | 9267 | 4.863548 | ACAACAAGATGGTGGATCATCAT | 58.136 | 39.130 | 2.79 | 0.00 | 44.30 | 2.45 |
4087 | 9268 | 4.263418 | TGACAACAAGATGGTGGATCATCA | 60.263 | 41.667 | 2.79 | 0.00 | 44.30 | 3.07 |
4114 | 9296 | 8.082852 | CACTGACCACTCCAACACTATATATAC | 58.917 | 40.741 | 0.00 | 0.00 | 0.00 | 1.47 |
4119 | 9301 | 3.513912 | CCACTGACCACTCCAACACTATA | 59.486 | 47.826 | 0.00 | 0.00 | 0.00 | 1.31 |
4120 | 9302 | 2.303022 | CCACTGACCACTCCAACACTAT | 59.697 | 50.000 | 0.00 | 0.00 | 0.00 | 2.12 |
4121 | 9303 | 1.691976 | CCACTGACCACTCCAACACTA | 59.308 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
4122 | 9304 | 0.469917 | CCACTGACCACTCCAACACT | 59.530 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4123 | 9305 | 0.180406 | ACCACTGACCACTCCAACAC | 59.820 | 55.000 | 0.00 | 0.00 | 0.00 | 3.32 |
4124 | 9306 | 0.180171 | CACCACTGACCACTCCAACA | 59.820 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
4126 | 9308 | 1.414919 | GTACACCACTGACCACTCCAA | 59.585 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
4128 | 9310 | 1.045407 | TGTACACCACTGACCACTCC | 58.955 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4130 | 9312 | 2.037251 | GACATGTACACCACTGACCACT | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4131 | 9313 | 2.224185 | TGACATGTACACCACTGACCAC | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
4132 | 9314 | 2.043227 | TGACATGTACACCACTGACCA | 58.957 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
4133 | 9315 | 2.831685 | TGACATGTACACCACTGACC | 57.168 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
4134 | 9316 | 4.569943 | AGAATGACATGTACACCACTGAC | 58.430 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
4135 | 9317 | 4.890158 | AGAATGACATGTACACCACTGA | 57.110 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
4136 | 9318 | 5.239306 | ACAAAGAATGACATGTACACCACTG | 59.761 | 40.000 | 0.00 | 0.00 | 0.00 | 3.66 |
4171 | 9353 | 3.286751 | AAGCGGCGCTTCAAGCAA | 61.287 | 55.556 | 38.70 | 0.00 | 46.77 | 3.91 |
4199 | 9382 | 2.687425 | TCTTGTTTTTACAGCTGCTGCA | 59.313 | 40.909 | 28.39 | 14.52 | 42.74 | 4.41 |
4200 | 9383 | 3.354089 | TCTTGTTTTTACAGCTGCTGC | 57.646 | 42.857 | 28.39 | 12.16 | 34.37 | 5.25 |
4206 | 9389 | 4.142249 | ACCTGTGGTTCTTGTTTTTACAGC | 60.142 | 41.667 | 0.00 | 0.00 | 34.33 | 4.40 |
4265 | 9474 | 6.589523 | TGCATATAAAACCAACATGAGCAAAC | 59.410 | 34.615 | 0.00 | 0.00 | 0.00 | 2.93 |
4290 | 9502 | 6.402222 | TCCAAAATACAAGCAACAAAGTGTT | 58.598 | 32.000 | 0.00 | 0.00 | 42.08 | 3.32 |
4355 | 9584 | 0.179200 | CATAAAACCACCGCGCTGTC | 60.179 | 55.000 | 5.56 | 0.00 | 0.00 | 3.51 |
4363 | 9709 | 6.085573 | GCATTTTGCAAATCATAAAACCACC | 58.914 | 36.000 | 13.65 | 0.00 | 44.26 | 4.61 |
4402 | 9748 | 6.476378 | GGCCTCCATCTAGCATTTTTCTATA | 58.524 | 40.000 | 0.00 | 0.00 | 0.00 | 1.31 |
4415 | 9762 | 3.924114 | TTGAAATTCGGCCTCCATCTA | 57.076 | 42.857 | 0.00 | 0.00 | 0.00 | 1.98 |
4417 | 9764 | 3.866883 | TTTTGAAATTCGGCCTCCATC | 57.133 | 42.857 | 0.00 | 0.00 | 0.00 | 3.51 |
4471 | 9821 | 7.735326 | AATGTGTCTCTAGGTATAGGTGTTT | 57.265 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
4472 | 9822 | 7.837689 | TGTAATGTGTCTCTAGGTATAGGTGTT | 59.162 | 37.037 | 0.00 | 0.00 | 0.00 | 3.32 |
4535 | 9924 | 9.202273 | CACGGAGGATGAAAAATTTGAAAAATA | 57.798 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
4536 | 9925 | 7.930865 | TCACGGAGGATGAAAAATTTGAAAAAT | 59.069 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
4537 | 9926 | 7.223777 | GTCACGGAGGATGAAAAATTTGAAAAA | 59.776 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
4540 | 9929 | 5.561919 | CGTCACGGAGGATGAAAAATTTGAA | 60.562 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4546 | 9935 | 1.153353 | GCGTCACGGAGGATGAAAAA | 58.847 | 50.000 | 0.00 | 0.00 | 0.00 | 1.94 |
4553 | 9942 | 3.138798 | GCCTAGCGTCACGGAGGA | 61.139 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
4607 | 10003 | 5.046878 | TGACTCGGTCAGGCTAAGAAAATAA | 60.047 | 40.000 | 3.02 | 0.00 | 37.67 | 1.40 |
4608 | 10004 | 4.464951 | TGACTCGGTCAGGCTAAGAAAATA | 59.535 | 41.667 | 3.02 | 0.00 | 37.67 | 1.40 |
4609 | 10005 | 3.260884 | TGACTCGGTCAGGCTAAGAAAAT | 59.739 | 43.478 | 3.02 | 0.00 | 37.67 | 1.82 |
4611 | 10007 | 2.244695 | TGACTCGGTCAGGCTAAGAAA | 58.755 | 47.619 | 3.02 | 0.00 | 37.67 | 2.52 |
4614 | 10010 | 2.969628 | ATTGACTCGGTCAGGCTAAG | 57.030 | 50.000 | 6.79 | 0.00 | 43.69 | 2.18 |
4615 | 10011 | 3.628008 | TCTATTGACTCGGTCAGGCTAA | 58.372 | 45.455 | 6.79 | 0.00 | 43.69 | 3.09 |
4616 | 10012 | 3.292492 | TCTATTGACTCGGTCAGGCTA | 57.708 | 47.619 | 6.79 | 1.91 | 43.69 | 3.93 |
4617 | 10013 | 2.145397 | TCTATTGACTCGGTCAGGCT | 57.855 | 50.000 | 6.79 | 0.00 | 43.69 | 4.58 |
4618 | 10014 | 2.961526 | TTCTATTGACTCGGTCAGGC | 57.038 | 50.000 | 6.79 | 0.00 | 43.69 | 4.85 |
4619 | 10015 | 9.712305 | ATATATTTTTCTATTGACTCGGTCAGG | 57.288 | 33.333 | 6.79 | 3.44 | 43.69 | 3.86 |
4635 | 10031 | 9.899226 | GCCAGACCTAATGTTGATATATTTTTC | 57.101 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
4636 | 10032 | 8.860088 | GGCCAGACCTAATGTTGATATATTTTT | 58.140 | 33.333 | 0.00 | 0.00 | 34.51 | 1.94 |
4637 | 10033 | 8.004215 | TGGCCAGACCTAATGTTGATATATTTT | 58.996 | 33.333 | 0.00 | 0.00 | 40.22 | 1.82 |
4638 | 10034 | 7.526041 | TGGCCAGACCTAATGTTGATATATTT | 58.474 | 34.615 | 0.00 | 0.00 | 40.22 | 1.40 |
4639 | 10035 | 7.090319 | TGGCCAGACCTAATGTTGATATATT | 57.910 | 36.000 | 0.00 | 0.00 | 40.22 | 1.28 |
4640 | 10036 | 6.702449 | TGGCCAGACCTAATGTTGATATAT | 57.298 | 37.500 | 0.00 | 0.00 | 40.22 | 0.86 |
4641 | 10037 | 6.101150 | ACTTGGCCAGACCTAATGTTGATATA | 59.899 | 38.462 | 5.11 | 0.00 | 40.22 | 0.86 |
4642 | 10038 | 5.103940 | ACTTGGCCAGACCTAATGTTGATAT | 60.104 | 40.000 | 5.11 | 0.00 | 40.22 | 1.63 |
4643 | 10039 | 4.227300 | ACTTGGCCAGACCTAATGTTGATA | 59.773 | 41.667 | 5.11 | 0.00 | 40.22 | 2.15 |
4644 | 10040 | 3.010584 | ACTTGGCCAGACCTAATGTTGAT | 59.989 | 43.478 | 5.11 | 0.00 | 40.22 | 2.57 |
4645 | 10041 | 2.375174 | ACTTGGCCAGACCTAATGTTGA | 59.625 | 45.455 | 5.11 | 0.00 | 40.22 | 3.18 |
4646 | 10042 | 2.749621 | GACTTGGCCAGACCTAATGTTG | 59.250 | 50.000 | 5.11 | 0.00 | 40.22 | 3.33 |
4647 | 10043 | 2.375174 | TGACTTGGCCAGACCTAATGTT | 59.625 | 45.455 | 5.11 | 0.00 | 40.22 | 2.71 |
4648 | 10044 | 1.985159 | TGACTTGGCCAGACCTAATGT | 59.015 | 47.619 | 5.11 | 0.00 | 40.22 | 2.71 |
4649 | 10045 | 2.787473 | TGACTTGGCCAGACCTAATG | 57.213 | 50.000 | 5.11 | 0.00 | 40.22 | 1.90 |
4650 | 10046 | 4.721776 | TCTATTGACTTGGCCAGACCTAAT | 59.278 | 41.667 | 5.11 | 7.48 | 40.22 | 1.73 |
4651 | 10047 | 4.101114 | TCTATTGACTTGGCCAGACCTAA | 58.899 | 43.478 | 5.11 | 0.00 | 40.22 | 2.69 |
4693 | 10089 | 7.862512 | AATTGAATGAAACACATTTGTTGGT | 57.137 | 28.000 | 0.00 | 0.00 | 45.69 | 3.67 |
4765 | 10161 | 7.760340 | CCTAAGTCAAACTAATCTACACCAGAC | 59.240 | 40.741 | 0.00 | 0.00 | 35.62 | 3.51 |
4807 | 10244 | 5.745769 | GCTGCAGCCAACTCTAAATTATTTC | 59.254 | 40.000 | 28.76 | 0.00 | 34.31 | 2.17 |
4869 | 10316 | 8.874156 | AGATAATCTTATGGATCAGTGCACTAA | 58.126 | 33.333 | 21.20 | 5.25 | 32.76 | 2.24 |
4909 | 10357 | 8.392612 | TGTGTGTAAGAGCAAGTAAAGTAAAAC | 58.607 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
4926 | 10374 | 4.041049 | TGCTTTGCGATTTTGTGTGTAAG | 58.959 | 39.130 | 0.00 | 0.00 | 0.00 | 2.34 |
4945 | 10393 | 2.358003 | GCTTCCGCTGAGTGTGCT | 60.358 | 61.111 | 0.00 | 0.00 | 0.00 | 4.40 |
4990 | 10444 | 2.817258 | TCGTCGAATTTTGGCATTTCCT | 59.183 | 40.909 | 0.00 | 0.00 | 35.26 | 3.36 |
4993 | 10447 | 2.224549 | TCGTCGTCGAATTTTGGCATTT | 59.775 | 40.909 | 1.37 | 0.00 | 43.34 | 2.32 |
5050 | 10505 | 6.652205 | TGACCTATTTATTCCCCCATATCC | 57.348 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.