Multiple sequence alignment - TraesCS4B01G368200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G368200 chr4B 100.000 2321 0 0 1 2321 654700421 654698101 0.000000e+00 4287
1 TraesCS4B01G368200 chr4B 96.081 1786 58 7 543 2321 654752375 654750595 0.000000e+00 2900
2 TraesCS4B01G368200 chr4B 95.745 1786 64 7 543 2321 654762614 654760834 0.000000e+00 2867
3 TraesCS4B01G368200 chr4B 95.623 1782 69 7 543 2321 654774820 654773045 0.000000e+00 2850
4 TraesCS4B01G368200 chr4B 83.718 1818 200 44 543 2321 654603476 654601716 0.000000e+00 1629
5 TraesCS4B01G368200 chr4B 95.548 921 34 6 1403 2321 654634194 654633279 0.000000e+00 1467
6 TraesCS4B01G368200 chr4B 88.180 846 79 8 543 1383 655059483 655058654 0.000000e+00 989
7 TraesCS4B01G368200 chr4B 89.093 761 77 3 629 1383 655092529 655091769 0.000000e+00 941
8 TraesCS4B01G368200 chr4B 96.296 378 12 2 543 919 654643206 654642830 9.110000e-174 619
9 TraesCS4B01G368200 chr4B 82.629 213 29 7 335 544 57962911 57963118 5.090000e-42 182
10 TraesCS4B01G368200 chr4B 82.692 208 29 6 340 544 347565815 347565612 6.590000e-41 178
11 TraesCS4B01G368200 chr4B 79.755 163 31 2 387 548 535220253 535220092 1.460000e-22 117
12 TraesCS4B01G368200 chr4A 94.849 563 19 2 1 554 658036397 658036958 0.000000e+00 870
13 TraesCS4B01G368200 chrUn 88.296 675 66 9 773 1438 189558348 189557678 0.000000e+00 797
14 TraesCS4B01G368200 chrUn 87.773 687 71 9 761 1438 154546022 154546704 0.000000e+00 791
15 TraesCS4B01G368200 chrUn 88.281 640 65 6 773 1404 363525503 363524866 0.000000e+00 758
16 TraesCS4B01G368200 chrUn 96.822 409 13 0 1589 1997 477840581 477840173 0.000000e+00 684
17 TraesCS4B01G368200 chrUn 85.469 640 77 12 1506 2136 154497096 154497728 0.000000e+00 652
18 TraesCS4B01G368200 chrUn 85.469 640 77 12 1506 2136 159524456 159523824 0.000000e+00 652
19 TraesCS4B01G368200 chrUn 91.809 293 21 3 543 835 154570964 154571253 2.780000e-109 405
20 TraesCS4B01G368200 chrUn 85.818 275 34 4 1797 2069 154572577 154572848 1.050000e-73 287
21 TraesCS4B01G368200 chrUn 90.426 94 9 0 445 538 81270276 81270369 8.710000e-25 124
22 TraesCS4B01G368200 chr5A 92.053 302 22 2 543 843 692206132 692205832 7.670000e-115 424
23 TraesCS4B01G368200 chr5B 82.870 216 26 10 335 544 616335924 616335714 1.420000e-42 183
24 TraesCS4B01G368200 chr5B 81.019 216 30 10 335 544 641225688 641225478 6.640000e-36 161
25 TraesCS4B01G368200 chr7B 81.875 160 25 4 387 544 99488811 99488654 5.200000e-27 132
26 TraesCS4B01G368200 chr2A 79.355 155 30 2 385 538 736728016 736727863 8.770000e-20 108


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G368200 chr4B 654698101 654700421 2320 True 4287 4287 100.0000 1 2321 1 chr4B.!!$R6 2320
1 TraesCS4B01G368200 chr4B 654750595 654752375 1780 True 2900 2900 96.0810 543 2321 1 chr4B.!!$R7 1778
2 TraesCS4B01G368200 chr4B 654760834 654762614 1780 True 2867 2867 95.7450 543 2321 1 chr4B.!!$R8 1778
3 TraesCS4B01G368200 chr4B 654773045 654774820 1775 True 2850 2850 95.6230 543 2321 1 chr4B.!!$R9 1778
4 TraesCS4B01G368200 chr4B 654601716 654603476 1760 True 1629 1629 83.7180 543 2321 1 chr4B.!!$R3 1778
5 TraesCS4B01G368200 chr4B 654633279 654634194 915 True 1467 1467 95.5480 1403 2321 1 chr4B.!!$R4 918
6 TraesCS4B01G368200 chr4B 655058654 655059483 829 True 989 989 88.1800 543 1383 1 chr4B.!!$R10 840
7 TraesCS4B01G368200 chr4B 655091769 655092529 760 True 941 941 89.0930 629 1383 1 chr4B.!!$R11 754
8 TraesCS4B01G368200 chr4A 658036397 658036958 561 False 870 870 94.8490 1 554 1 chr4A.!!$F1 553
9 TraesCS4B01G368200 chrUn 189557678 189558348 670 True 797 797 88.2960 773 1438 1 chrUn.!!$R2 665
10 TraesCS4B01G368200 chrUn 154546022 154546704 682 False 791 791 87.7730 761 1438 1 chrUn.!!$F3 677
11 TraesCS4B01G368200 chrUn 363524866 363525503 637 True 758 758 88.2810 773 1404 1 chrUn.!!$R3 631
12 TraesCS4B01G368200 chrUn 154497096 154497728 632 False 652 652 85.4690 1506 2136 1 chrUn.!!$F2 630
13 TraesCS4B01G368200 chrUn 159523824 159524456 632 True 652 652 85.4690 1506 2136 1 chrUn.!!$R1 630
14 TraesCS4B01G368200 chrUn 154570964 154572848 1884 False 346 405 88.8135 543 2069 2 chrUn.!!$F4 1526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
462 463 0.02161 CGATCGAACGGACGAAAACG 59.978 55.0 10.26 11.43 45.16 3.6 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1351 2010 0.096976 CCACGACGATGCATGGTTTC 59.903 55.0 15.94 3.25 0.0 2.78 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 0.104934 GGAGGAGGGGAGAAGCCATA 60.105 60.000 0.00 0.00 38.95 2.74
57 58 0.387202 CGAGGAGAAGATGATGCGGT 59.613 55.000 0.00 0.00 0.00 5.68
167 168 2.442458 GAGGAGAGGGGACGGGAC 60.442 72.222 0.00 0.00 0.00 4.46
168 169 4.077180 AGGAGAGGGGACGGGACC 62.077 72.222 0.00 0.00 0.00 4.46
219 220 4.394712 GACGGGGAGTGGTGGCTG 62.395 72.222 0.00 0.00 0.00 4.85
241 242 3.300013 CCAGGAAGGGGACGAGAC 58.700 66.667 0.00 0.00 0.00 3.36
242 243 2.711922 CCAGGAAGGGGACGAGACG 61.712 68.421 0.00 0.00 0.00 4.18
243 244 2.362632 AGGAAGGGGACGAGACGG 60.363 66.667 0.00 0.00 0.00 4.79
244 245 4.144703 GGAAGGGGACGAGACGGC 62.145 72.222 0.00 0.00 0.00 5.68
245 246 4.493747 GAAGGGGACGAGACGGCG 62.494 72.222 4.80 4.80 34.63 6.46
259 260 3.299190 GGCGGCGCCTCTATCTCT 61.299 66.667 41.44 0.00 46.69 3.10
260 261 2.257067 GCGGCGCCTCTATCTCTC 59.743 66.667 26.68 0.00 0.00 3.20
261 262 2.556459 GCGGCGCCTCTATCTCTCA 61.556 63.158 26.68 0.00 0.00 3.27
262 263 1.284408 CGGCGCCTCTATCTCTCAC 59.716 63.158 26.68 0.00 0.00 3.51
263 264 1.284408 GGCGCCTCTATCTCTCACG 59.716 63.158 22.15 0.00 0.00 4.35
264 265 1.284408 GCGCCTCTATCTCTCACGG 59.716 63.158 0.00 0.00 0.00 4.94
265 266 1.953017 CGCCTCTATCTCTCACGGG 59.047 63.158 0.00 0.00 0.00 5.28
266 267 0.535328 CGCCTCTATCTCTCACGGGA 60.535 60.000 0.00 0.00 0.00 5.14
267 268 1.693627 GCCTCTATCTCTCACGGGAA 58.306 55.000 0.00 0.00 0.00 3.97
268 269 2.032620 GCCTCTATCTCTCACGGGAAA 58.967 52.381 0.00 0.00 0.00 3.13
269 270 2.223852 GCCTCTATCTCTCACGGGAAAC 60.224 54.545 0.00 0.00 0.00 2.78
270 271 3.024547 CCTCTATCTCTCACGGGAAACA 58.975 50.000 0.00 0.00 0.00 2.83
271 272 3.181485 CCTCTATCTCTCACGGGAAACAC 60.181 52.174 0.00 0.00 0.00 3.32
272 273 2.422479 TCTATCTCTCACGGGAAACACG 59.578 50.000 0.00 0.00 37.36 4.49
273 274 1.254026 ATCTCTCACGGGAAACACGA 58.746 50.000 0.00 0.00 34.93 4.35
274 275 1.034356 TCTCTCACGGGAAACACGAA 58.966 50.000 0.00 0.00 34.93 3.85
275 276 1.000607 TCTCTCACGGGAAACACGAAG 60.001 52.381 0.00 0.00 34.93 3.79
276 277 1.000607 CTCTCACGGGAAACACGAAGA 60.001 52.381 0.00 2.36 34.93 2.87
277 278 1.000607 TCTCACGGGAAACACGAAGAG 60.001 52.381 0.00 7.24 37.89 2.85
278 279 1.000607 CTCACGGGAAACACGAAGAGA 60.001 52.381 12.22 0.87 38.37 3.10
279 280 1.409790 TCACGGGAAACACGAAGAGAA 59.590 47.619 0.00 0.00 34.93 2.87
280 281 1.792949 CACGGGAAACACGAAGAGAAG 59.207 52.381 0.00 0.00 34.93 2.85
281 282 1.684983 ACGGGAAACACGAAGAGAAGA 59.315 47.619 0.00 0.00 34.93 2.87
282 283 2.288273 ACGGGAAACACGAAGAGAAGAG 60.288 50.000 0.00 0.00 34.93 2.85
283 284 2.689646 GGGAAACACGAAGAGAAGAGG 58.310 52.381 0.00 0.00 0.00 3.69
284 285 2.299297 GGGAAACACGAAGAGAAGAGGA 59.701 50.000 0.00 0.00 0.00 3.71
285 286 3.318886 GGAAACACGAAGAGAAGAGGAC 58.681 50.000 0.00 0.00 0.00 3.85
286 287 2.708386 AACACGAAGAGAAGAGGACG 57.292 50.000 0.00 0.00 0.00 4.79
287 288 0.241481 ACACGAAGAGAAGAGGACGC 59.759 55.000 0.00 0.00 0.00 5.19
288 289 0.523966 CACGAAGAGAAGAGGACGCT 59.476 55.000 0.00 0.00 0.00 5.07
289 290 0.523966 ACGAAGAGAAGAGGACGCTG 59.476 55.000 0.00 0.00 0.00 5.18
290 291 0.179150 CGAAGAGAAGAGGACGCTGG 60.179 60.000 0.00 0.00 0.00 4.85
291 292 0.174617 GAAGAGAAGAGGACGCTGGG 59.825 60.000 0.00 0.00 0.00 4.45
292 293 0.543174 AAGAGAAGAGGACGCTGGGT 60.543 55.000 0.00 0.00 0.00 4.51
293 294 1.216710 GAGAAGAGGACGCTGGGTG 59.783 63.158 0.70 0.00 0.00 4.61
294 295 2.232298 GAGAAGAGGACGCTGGGTGG 62.232 65.000 0.70 0.00 0.00 4.61
295 296 2.203788 AAGAGGACGCTGGGTGGA 60.204 61.111 0.70 0.00 0.00 4.02
296 297 2.232298 GAAGAGGACGCTGGGTGGAG 62.232 65.000 0.70 0.00 0.00 3.86
297 298 2.680352 GAGGACGCTGGGTGGAGA 60.680 66.667 0.70 0.00 0.00 3.71
298 299 2.681778 AGGACGCTGGGTGGAGAG 60.682 66.667 0.70 0.00 0.00 3.20
299 300 2.680352 GGACGCTGGGTGGAGAGA 60.680 66.667 0.70 0.00 0.00 3.10
300 301 2.283529 GGACGCTGGGTGGAGAGAA 61.284 63.158 0.70 0.00 0.00 2.87
301 302 1.079750 GACGCTGGGTGGAGAGAAC 60.080 63.158 0.70 0.00 0.00 3.01
302 303 2.266055 CGCTGGGTGGAGAGAACC 59.734 66.667 0.00 0.00 36.94 3.62
308 309 2.917804 GGTGGAGAGAACCCTAGGG 58.082 63.158 27.36 27.36 42.03 3.53
309 310 1.338890 GGTGGAGAGAACCCTAGGGC 61.339 65.000 28.88 12.77 39.32 5.19
310 311 0.617820 GTGGAGAGAACCCTAGGGCA 60.618 60.000 28.88 12.84 39.32 5.36
311 312 0.343372 TGGAGAGAACCCTAGGGCAT 59.657 55.000 28.88 17.43 39.32 4.40
312 313 1.274416 TGGAGAGAACCCTAGGGCATT 60.274 52.381 28.88 15.89 39.32 3.56
313 314 1.141858 GGAGAGAACCCTAGGGCATTG 59.858 57.143 28.88 3.82 39.32 2.82
314 315 1.141858 GAGAGAACCCTAGGGCATTGG 59.858 57.143 28.88 3.00 39.32 3.16
318 319 3.018901 CCCTAGGGCATTGGGCTT 58.981 61.111 16.90 0.00 44.01 4.35
319 320 1.311059 CCCTAGGGCATTGGGCTTT 59.689 57.895 16.90 0.00 44.01 3.51
320 321 0.325577 CCCTAGGGCATTGGGCTTTT 60.326 55.000 16.90 0.00 44.01 2.27
321 322 1.063266 CCCTAGGGCATTGGGCTTTTA 60.063 52.381 16.90 0.00 44.01 1.52
322 323 2.426268 CCCTAGGGCATTGGGCTTTTAT 60.426 50.000 16.90 0.00 44.01 1.40
323 324 3.181423 CCCTAGGGCATTGGGCTTTTATA 60.181 47.826 16.90 0.00 44.01 0.98
324 325 3.826729 CCTAGGGCATTGGGCTTTTATAC 59.173 47.826 0.00 0.00 44.01 1.47
325 326 2.677914 AGGGCATTGGGCTTTTATACC 58.322 47.619 0.00 0.00 44.01 2.73
326 327 2.247372 AGGGCATTGGGCTTTTATACCT 59.753 45.455 0.00 0.00 44.01 3.08
327 328 2.628178 GGGCATTGGGCTTTTATACCTC 59.372 50.000 0.00 0.00 44.01 3.85
328 329 2.628178 GGCATTGGGCTTTTATACCTCC 59.372 50.000 0.00 0.00 44.01 4.30
329 330 3.566351 GCATTGGGCTTTTATACCTCCT 58.434 45.455 0.00 0.00 40.25 3.69
330 331 3.319122 GCATTGGGCTTTTATACCTCCTG 59.681 47.826 0.00 0.00 40.25 3.86
331 332 4.792068 CATTGGGCTTTTATACCTCCTGA 58.208 43.478 0.00 0.00 0.00 3.86
332 333 3.926058 TGGGCTTTTATACCTCCTGAC 57.074 47.619 0.00 0.00 0.00 3.51
333 334 2.169769 TGGGCTTTTATACCTCCTGACG 59.830 50.000 0.00 0.00 0.00 4.35
334 335 2.433239 GGGCTTTTATACCTCCTGACGA 59.567 50.000 0.00 0.00 0.00 4.20
335 336 3.118519 GGGCTTTTATACCTCCTGACGAA 60.119 47.826 0.00 0.00 0.00 3.85
336 337 4.510571 GGCTTTTATACCTCCTGACGAAA 58.489 43.478 0.00 0.00 0.00 3.46
337 338 5.123936 GGCTTTTATACCTCCTGACGAAAT 58.876 41.667 0.00 0.00 0.00 2.17
338 339 5.589050 GGCTTTTATACCTCCTGACGAAATT 59.411 40.000 0.00 0.00 0.00 1.82
339 340 6.238402 GGCTTTTATACCTCCTGACGAAATTC 60.238 42.308 0.00 0.00 0.00 2.17
340 341 6.238402 GCTTTTATACCTCCTGACGAAATTCC 60.238 42.308 0.00 0.00 0.00 3.01
341 342 3.840124 ATACCTCCTGACGAAATTCCC 57.160 47.619 0.00 0.00 0.00 3.97
342 343 1.657804 ACCTCCTGACGAAATTCCCT 58.342 50.000 0.00 0.00 0.00 4.20
343 344 1.555533 ACCTCCTGACGAAATTCCCTC 59.444 52.381 0.00 0.00 0.00 4.30
344 345 1.471676 CCTCCTGACGAAATTCCCTCG 60.472 57.143 0.00 0.00 42.06 4.63
345 346 0.535335 TCCTGACGAAATTCCCTCGG 59.465 55.000 3.31 0.00 40.64 4.63
346 347 1.090052 CCTGACGAAATTCCCTCGGC 61.090 60.000 3.31 0.17 44.86 5.54
347 348 3.395669 GACGAAATTCCCTCGGCG 58.604 61.111 0.00 0.00 40.64 6.46
348 349 2.125269 ACGAAATTCCCTCGGCGG 60.125 61.111 7.21 0.00 40.64 6.13
358 359 3.833645 CTCGGCGGGACATCGGAA 61.834 66.667 0.00 0.00 0.00 4.30
359 360 3.151710 TCGGCGGGACATCGGAAT 61.152 61.111 7.21 0.00 0.00 3.01
360 361 1.802337 CTCGGCGGGACATCGGAATA 61.802 60.000 0.00 0.00 0.00 1.75
361 362 1.068417 CGGCGGGACATCGGAATAA 59.932 57.895 0.00 0.00 0.00 1.40
362 363 1.219522 CGGCGGGACATCGGAATAAC 61.220 60.000 0.00 0.00 0.00 1.89
363 364 0.179067 GGCGGGACATCGGAATAACA 60.179 55.000 0.00 0.00 0.00 2.41
364 365 0.935196 GCGGGACATCGGAATAACAC 59.065 55.000 0.00 0.00 0.00 3.32
365 366 1.205657 CGGGACATCGGAATAACACG 58.794 55.000 0.00 0.00 0.00 4.49
366 367 0.935196 GGGACATCGGAATAACACGC 59.065 55.000 0.00 0.00 0.00 5.34
367 368 0.575390 GGACATCGGAATAACACGCG 59.425 55.000 3.53 3.53 0.00 6.01
368 369 1.552226 GACATCGGAATAACACGCGA 58.448 50.000 15.93 0.00 0.00 5.87
369 370 2.124903 GACATCGGAATAACACGCGAT 58.875 47.619 15.93 0.13 0.00 4.58
370 371 1.858458 ACATCGGAATAACACGCGATG 59.142 47.619 15.93 10.38 40.50 3.84
371 372 1.192312 CATCGGAATAACACGCGATGG 59.808 52.381 15.93 4.07 36.19 3.51
372 373 1.149361 TCGGAATAACACGCGATGGC 61.149 55.000 15.93 0.00 0.00 4.40
373 374 1.425267 CGGAATAACACGCGATGGCA 61.425 55.000 15.93 0.00 39.92 4.92
374 375 0.027586 GGAATAACACGCGATGGCAC 59.972 55.000 15.93 0.00 39.92 5.01
391 392 5.590530 TGGCACAAGATTTTTACACTGTT 57.409 34.783 0.00 0.00 31.92 3.16
392 393 5.971763 TGGCACAAGATTTTTACACTGTTT 58.028 33.333 0.00 0.00 31.92 2.83
393 394 6.039616 TGGCACAAGATTTTTACACTGTTTC 58.960 36.000 0.00 0.00 31.92 2.78
394 395 5.173131 GGCACAAGATTTTTACACTGTTTCG 59.827 40.000 0.00 0.00 0.00 3.46
395 396 5.968848 GCACAAGATTTTTACACTGTTTCGA 59.031 36.000 0.00 0.00 0.00 3.71
396 397 6.636850 GCACAAGATTTTTACACTGTTTCGAT 59.363 34.615 0.00 0.00 0.00 3.59
397 398 7.149128 GCACAAGATTTTTACACTGTTTCGATC 60.149 37.037 0.00 0.00 0.00 3.69
398 399 7.323656 CACAAGATTTTTACACTGTTTCGATCC 59.676 37.037 0.00 0.00 0.00 3.36
399 400 7.012894 ACAAGATTTTTACACTGTTTCGATCCA 59.987 33.333 0.00 0.00 0.00 3.41
400 401 6.899114 AGATTTTTACACTGTTTCGATCCAC 58.101 36.000 0.00 0.00 0.00 4.02
401 402 6.485313 AGATTTTTACACTGTTTCGATCCACA 59.515 34.615 0.00 0.00 0.00 4.17
402 403 5.666969 TTTTACACTGTTTCGATCCACAG 57.333 39.130 15.03 15.03 45.15 3.66
409 410 5.255710 CTGTTTCGATCCACAGTATCTCT 57.744 43.478 10.38 0.00 36.44 3.10
410 411 5.655488 CTGTTTCGATCCACAGTATCTCTT 58.345 41.667 10.38 0.00 36.44 2.85
411 412 6.037786 TGTTTCGATCCACAGTATCTCTTT 57.962 37.500 0.00 0.00 0.00 2.52
412 413 7.165460 TGTTTCGATCCACAGTATCTCTTTA 57.835 36.000 0.00 0.00 0.00 1.85
413 414 7.782049 TGTTTCGATCCACAGTATCTCTTTAT 58.218 34.615 0.00 0.00 0.00 1.40
414 415 7.706607 TGTTTCGATCCACAGTATCTCTTTATG 59.293 37.037 0.00 0.00 0.00 1.90
415 416 7.582667 TTCGATCCACAGTATCTCTTTATGA 57.417 36.000 0.00 0.00 0.00 2.15
416 417 7.767250 TCGATCCACAGTATCTCTTTATGAT 57.233 36.000 0.00 0.00 0.00 2.45
417 418 7.821652 TCGATCCACAGTATCTCTTTATGATC 58.178 38.462 0.00 0.00 0.00 2.92
418 419 6.744993 CGATCCACAGTATCTCTTTATGATCG 59.255 42.308 0.00 0.00 0.00 3.69
419 420 7.361286 CGATCCACAGTATCTCTTTATGATCGA 60.361 40.741 0.00 0.00 38.19 3.59
420 421 7.582667 TCCACAGTATCTCTTTATGATCGAA 57.417 36.000 0.00 0.00 0.00 3.71
421 422 7.426410 TCCACAGTATCTCTTTATGATCGAAC 58.574 38.462 0.00 0.00 0.00 3.95
422 423 6.360947 CCACAGTATCTCTTTATGATCGAACG 59.639 42.308 0.00 0.00 0.00 3.95
423 424 6.913132 CACAGTATCTCTTTATGATCGAACGT 59.087 38.462 0.00 0.00 0.00 3.99
424 425 7.112287 CACAGTATCTCTTTATGATCGAACGTC 59.888 40.741 0.00 0.00 0.00 4.34
425 426 7.012515 ACAGTATCTCTTTATGATCGAACGTCT 59.987 37.037 0.00 0.00 0.00 4.18
426 427 7.532546 CAGTATCTCTTTATGATCGAACGTCTC 59.467 40.741 0.00 0.00 0.00 3.36
427 428 5.813080 TCTCTTTATGATCGAACGTCTCA 57.187 39.130 0.00 0.00 0.00 3.27
428 429 6.378710 TCTCTTTATGATCGAACGTCTCAT 57.621 37.500 14.78 14.78 34.22 2.90
429 430 7.492352 TCTCTTTATGATCGAACGTCTCATA 57.508 36.000 13.45 13.45 32.20 2.15
430 431 8.100508 TCTCTTTATGATCGAACGTCTCATAT 57.899 34.615 16.06 0.00 33.24 1.78
431 432 8.231161 TCTCTTTATGATCGAACGTCTCATATC 58.769 37.037 16.06 6.87 33.24 1.63
432 433 8.100508 TCTTTATGATCGAACGTCTCATATCT 57.899 34.615 16.06 3.02 33.24 1.98
433 434 8.231161 TCTTTATGATCGAACGTCTCATATCTC 58.769 37.037 16.06 0.00 33.24 2.75
434 435 7.674471 TTATGATCGAACGTCTCATATCTCT 57.326 36.000 16.06 2.31 33.24 3.10
435 436 5.599359 TGATCGAACGTCTCATATCTCTC 57.401 43.478 0.00 0.00 0.00 3.20
436 437 4.452795 TGATCGAACGTCTCATATCTCTCC 59.547 45.833 0.00 0.00 0.00 3.71
437 438 3.805207 TCGAACGTCTCATATCTCTCCA 58.195 45.455 0.00 0.00 0.00 3.86
438 439 4.390264 TCGAACGTCTCATATCTCTCCAT 58.610 43.478 0.00 0.00 0.00 3.41
439 440 4.822350 TCGAACGTCTCATATCTCTCCATT 59.178 41.667 0.00 0.00 0.00 3.16
440 441 5.995897 TCGAACGTCTCATATCTCTCCATTA 59.004 40.000 0.00 0.00 0.00 1.90
441 442 6.147985 TCGAACGTCTCATATCTCTCCATTAG 59.852 42.308 0.00 0.00 0.00 1.73
442 443 6.147985 CGAACGTCTCATATCTCTCCATTAGA 59.852 42.308 0.00 0.00 0.00 2.10
443 444 6.811253 ACGTCTCATATCTCTCCATTAGAC 57.189 41.667 0.00 0.00 0.00 2.59
444 445 5.863898 CGTCTCATATCTCTCCATTAGACG 58.136 45.833 0.00 0.00 45.90 4.18
446 447 7.624360 GTCTCATATCTCTCCATTAGACGAT 57.376 40.000 0.00 0.00 0.00 3.73
447 448 7.693952 GTCTCATATCTCTCCATTAGACGATC 58.306 42.308 0.00 0.00 0.00 3.69
448 449 6.536941 TCTCATATCTCTCCATTAGACGATCG 59.463 42.308 14.88 14.88 0.00 3.69
449 450 6.407202 TCATATCTCTCCATTAGACGATCGA 58.593 40.000 24.34 0.00 0.00 3.59
450 451 6.879458 TCATATCTCTCCATTAGACGATCGAA 59.121 38.462 24.34 6.10 0.00 3.71
451 452 4.815040 TCTCTCCATTAGACGATCGAAC 57.185 45.455 24.34 14.96 0.00 3.95
452 453 3.247886 TCTCTCCATTAGACGATCGAACG 59.752 47.826 24.34 13.95 39.31 3.95
453 454 2.289820 TCTCCATTAGACGATCGAACGG 59.710 50.000 24.34 8.02 37.61 4.44
454 455 2.289820 CTCCATTAGACGATCGAACGGA 59.710 50.000 24.34 12.20 37.61 4.69
455 456 2.032550 TCCATTAGACGATCGAACGGAC 59.967 50.000 24.34 12.34 37.61 4.79
456 457 2.034789 CATTAGACGATCGAACGGACG 58.965 52.381 24.34 8.59 37.61 4.79
457 458 1.358877 TTAGACGATCGAACGGACGA 58.641 50.000 24.34 8.44 46.04 4.20
458 459 1.358877 TAGACGATCGAACGGACGAA 58.641 50.000 24.34 4.72 45.16 3.85
459 460 0.518636 AGACGATCGAACGGACGAAA 59.481 50.000 24.34 0.00 45.16 3.46
460 461 1.069022 AGACGATCGAACGGACGAAAA 60.069 47.619 24.34 0.00 45.16 2.29
461 462 1.055338 ACGATCGAACGGACGAAAAC 58.945 50.000 24.34 5.04 45.16 2.43
462 463 0.021610 CGATCGAACGGACGAAAACG 59.978 55.000 10.26 11.43 45.16 3.60
463 464 0.246642 GATCGAACGGACGAAAACGC 60.247 55.000 9.87 0.00 45.16 4.84
464 465 0.940519 ATCGAACGGACGAAAACGCA 60.941 50.000 9.87 0.00 45.16 5.24
465 466 0.940519 TCGAACGGACGAAAACGCAT 60.941 50.000 0.00 0.00 39.34 4.73
466 467 0.515717 CGAACGGACGAAAACGCATC 60.516 55.000 0.00 0.00 35.09 3.91
467 468 0.509499 GAACGGACGAAAACGCATCA 59.491 50.000 0.00 0.00 0.00 3.07
468 469 0.938713 AACGGACGAAAACGCATCAA 59.061 45.000 0.00 0.00 0.00 2.57
469 470 0.511221 ACGGACGAAAACGCATCAAG 59.489 50.000 0.00 0.00 0.00 3.02
470 471 0.179225 CGGACGAAAACGCATCAAGG 60.179 55.000 0.00 0.00 0.00 3.61
471 472 1.153353 GGACGAAAACGCATCAAGGA 58.847 50.000 0.00 0.00 0.00 3.36
472 473 1.136057 GGACGAAAACGCATCAAGGAC 60.136 52.381 0.00 0.00 0.00 3.85
473 474 0.872388 ACGAAAACGCATCAAGGACC 59.128 50.000 0.00 0.00 0.00 4.46
474 475 0.871722 CGAAAACGCATCAAGGACCA 59.128 50.000 0.00 0.00 0.00 4.02
475 476 1.135972 CGAAAACGCATCAAGGACCAG 60.136 52.381 0.00 0.00 0.00 4.00
476 477 2.151202 GAAAACGCATCAAGGACCAGA 58.849 47.619 0.00 0.00 0.00 3.86
477 478 2.496899 AAACGCATCAAGGACCAGAT 57.503 45.000 0.00 0.00 0.00 2.90
478 479 2.029838 AACGCATCAAGGACCAGATC 57.970 50.000 0.00 0.00 0.00 2.75
487 488 3.599584 GACCAGATCCGACGGTCA 58.400 61.111 14.79 0.00 46.98 4.02
488 489 1.433879 GACCAGATCCGACGGTCAG 59.566 63.158 14.79 7.71 46.98 3.51
489 490 2.005960 GACCAGATCCGACGGTCAGG 62.006 65.000 14.79 17.62 46.98 3.86
490 491 1.753078 CCAGATCCGACGGTCAGGA 60.753 63.158 14.79 19.00 41.30 3.86
491 492 1.320344 CCAGATCCGACGGTCAGGAA 61.320 60.000 20.06 8.71 40.32 3.36
492 493 0.101399 CAGATCCGACGGTCAGGAAG 59.899 60.000 20.06 12.28 40.32 3.46
493 494 1.227002 GATCCGACGGTCAGGAAGC 60.227 63.158 20.06 13.73 40.32 3.86
499 500 2.509336 CGGTCAGGAAGCGCGAAT 60.509 61.111 12.10 0.00 42.62 3.34
500 501 2.517450 CGGTCAGGAAGCGCGAATC 61.517 63.158 12.10 6.67 42.62 2.52
501 502 2.517450 GGTCAGGAAGCGCGAATCG 61.517 63.158 12.10 0.00 42.12 3.34
518 519 3.056328 GCTGAGGGCGTTGGGTTC 61.056 66.667 0.00 0.00 0.00 3.62
519 520 2.359975 CTGAGGGCGTTGGGTTCC 60.360 66.667 0.00 0.00 0.00 3.62
520 521 2.852075 TGAGGGCGTTGGGTTCCT 60.852 61.111 0.00 0.00 0.00 3.36
521 522 2.046217 GAGGGCGTTGGGTTCCTC 60.046 66.667 0.00 0.00 38.95 3.71
522 523 3.623703 GAGGGCGTTGGGTTCCTCC 62.624 68.421 0.00 0.00 39.75 4.30
537 538 6.099159 GGTTCCTCCCAGTATGTATCTTAC 57.901 45.833 0.00 0.00 0.00 2.34
538 539 5.011840 GGTTCCTCCCAGTATGTATCTTACC 59.988 48.000 0.00 0.00 0.00 2.85
539 540 4.748701 TCCTCCCAGTATGTATCTTACCC 58.251 47.826 0.00 0.00 0.00 3.69
540 541 4.422592 TCCTCCCAGTATGTATCTTACCCT 59.577 45.833 0.00 0.00 0.00 4.34
541 542 4.528596 CCTCCCAGTATGTATCTTACCCTG 59.471 50.000 0.00 0.00 0.00 4.45
615 627 6.183360 GCAAACCCATCAAACATATCTCATGA 60.183 38.462 0.00 0.00 0.00 3.07
735 747 6.637254 GTCAAACTCGATATATCATGACGTGT 59.363 38.462 13.11 0.79 33.44 4.49
771 784 2.890474 GCACACTACATCCCGGCG 60.890 66.667 0.00 0.00 0.00 6.46
858 1129 5.510179 GCCACAACCTAGTACACTCTTGTTA 60.510 44.000 0.00 0.00 37.15 2.41
861 1132 5.303589 ACAACCTAGTACACTCTTGTTAGCA 59.696 40.000 0.00 0.00 37.15 3.49
935 1206 0.321671 CTGAACCTGGTCATCGTGGT 59.678 55.000 0.00 0.00 0.00 4.16
986 1257 4.802051 CACACCGGCCATCCCAGG 62.802 72.222 0.00 0.00 34.64 4.45
1133 1405 1.066858 CCTGCTAAAGCTCAACCTCGA 60.067 52.381 3.26 0.00 42.66 4.04
1141 1413 3.553437 CTCAACCTCGACGTGCCGT 62.553 63.158 0.00 0.00 45.10 5.68
1257 1592 1.215647 GCTCAACGTCCCTGTCGAT 59.784 57.895 0.00 0.00 0.00 3.59
1435 2114 5.469084 ACGTATTTTGTTTCCTCTTCCAGTC 59.531 40.000 0.00 0.00 0.00 3.51
1447 2126 0.242825 TTCCAGTCCGTCGTCATCAC 59.757 55.000 0.00 0.00 0.00 3.06
1554 2233 7.562640 AATGATATACATACTTGTACACGCG 57.437 36.000 3.53 3.53 41.02 6.01
1555 2234 6.063640 TGATATACATACTTGTACACGCGT 57.936 37.500 5.58 5.58 41.02 6.01
1556 2235 7.188468 TGATATACATACTTGTACACGCGTA 57.812 36.000 13.44 0.00 41.02 4.42
1557 2236 7.071414 TGATATACATACTTGTACACGCGTAC 58.929 38.462 13.44 8.62 46.94 3.67
1631 2310 5.221028 GCCAGCTTGTATGCACACATTATTA 60.221 40.000 0.00 0.00 37.74 0.98
1715 2394 0.531090 TTACAACCGCAGCAACTCGT 60.531 50.000 0.00 0.00 0.00 4.18
1877 2636 9.841880 GTAAAATTTATTTGAACCAGGTCTCTC 57.158 33.333 0.00 0.00 0.00 3.20
1965 2731 9.210329 TCACAATTTCACGCTAAACTAGAATAA 57.790 29.630 0.00 0.00 0.00 1.40
2044 2812 6.594159 CCGTTCATAGTGTCCAGAAAGTAAAT 59.406 38.462 0.00 0.00 0.00 1.40
2081 2852 8.073768 CGAACATCACAATACCTGTTTTAACTT 58.926 33.333 0.00 0.00 35.47 2.66
2085 2856 9.912634 CATCACAATACCTGTTTTAACTTGAAT 57.087 29.630 0.00 0.00 35.47 2.57
2086 2857 9.912634 ATCACAATACCTGTTTTAACTTGAATG 57.087 29.630 0.00 0.00 35.47 2.67
2088 2859 8.967218 CACAATACCTGTTTTAACTTGAATGTG 58.033 33.333 0.00 0.00 35.47 3.21
2118 2892 7.421530 AACACACATGAATGTAGTGTTCTAC 57.578 36.000 23.59 0.00 46.84 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.756333 GCTTCTCCCCTCCTCCTCTAC 60.756 61.905 0.00 0.00 0.00 2.59
28 29 1.903877 CTTCTCCTCGCCACCACCAT 61.904 60.000 0.00 0.00 0.00 3.55
57 58 1.898459 GAGCTCACTCGTCGTCGTCA 61.898 60.000 9.40 0.00 38.33 4.35
135 136 0.612174 TCCTCACGGTTCCTCTCCTG 60.612 60.000 0.00 0.00 0.00 3.86
202 203 4.394712 CAGCCACCACTCCCCGTC 62.395 72.222 0.00 0.00 0.00 4.79
224 225 2.711922 CGTCTCGTCCCCTTCCTGG 61.712 68.421 0.00 0.00 0.00 4.45
225 226 2.711922 CCGTCTCGTCCCCTTCCTG 61.712 68.421 0.00 0.00 0.00 3.86
226 227 2.362632 CCGTCTCGTCCCCTTCCT 60.363 66.667 0.00 0.00 0.00 3.36
227 228 4.144703 GCCGTCTCGTCCCCTTCC 62.145 72.222 0.00 0.00 0.00 3.46
228 229 4.493747 CGCCGTCTCGTCCCCTTC 62.494 72.222 0.00 0.00 0.00 3.46
243 244 2.257067 GAGAGATAGAGGCGCCGC 59.743 66.667 23.92 23.92 0.00 6.53
244 245 1.284408 GTGAGAGATAGAGGCGCCG 59.716 63.158 23.20 0.00 0.00 6.46
245 246 1.284408 CGTGAGAGATAGAGGCGCC 59.716 63.158 21.89 21.89 0.00 6.53
246 247 1.284408 CCGTGAGAGATAGAGGCGC 59.716 63.158 0.00 0.00 0.00 6.53
247 248 0.535328 TCCCGTGAGAGATAGAGGCG 60.535 60.000 0.00 0.00 0.00 5.52
248 249 1.693627 TTCCCGTGAGAGATAGAGGC 58.306 55.000 0.00 0.00 0.00 4.70
249 250 3.024547 TGTTTCCCGTGAGAGATAGAGG 58.975 50.000 0.00 0.00 0.00 3.69
250 251 3.487711 CGTGTTTCCCGTGAGAGATAGAG 60.488 52.174 0.00 0.00 0.00 2.43
251 252 2.422479 CGTGTTTCCCGTGAGAGATAGA 59.578 50.000 0.00 0.00 0.00 1.98
252 253 2.422479 TCGTGTTTCCCGTGAGAGATAG 59.578 50.000 0.00 0.00 0.00 2.08
253 254 2.439409 TCGTGTTTCCCGTGAGAGATA 58.561 47.619 0.00 0.00 0.00 1.98
254 255 1.254026 TCGTGTTTCCCGTGAGAGAT 58.746 50.000 0.00 0.00 0.00 2.75
255 256 1.000607 CTTCGTGTTTCCCGTGAGAGA 60.001 52.381 0.00 0.00 0.00 3.10
256 257 1.000607 TCTTCGTGTTTCCCGTGAGAG 60.001 52.381 0.00 0.00 0.00 3.20
257 258 1.000607 CTCTTCGTGTTTCCCGTGAGA 60.001 52.381 0.00 0.00 32.92 3.27
258 259 1.000607 TCTCTTCGTGTTTCCCGTGAG 60.001 52.381 0.00 0.00 0.00 3.51
259 260 1.034356 TCTCTTCGTGTTTCCCGTGA 58.966 50.000 0.00 0.00 0.00 4.35
260 261 1.792949 CTTCTCTTCGTGTTTCCCGTG 59.207 52.381 0.00 0.00 0.00 4.94
261 262 1.684983 TCTTCTCTTCGTGTTTCCCGT 59.315 47.619 0.00 0.00 0.00 5.28
262 263 2.329379 CTCTTCTCTTCGTGTTTCCCG 58.671 52.381 0.00 0.00 0.00 5.14
263 264 2.299297 TCCTCTTCTCTTCGTGTTTCCC 59.701 50.000 0.00 0.00 0.00 3.97
264 265 3.318886 GTCCTCTTCTCTTCGTGTTTCC 58.681 50.000 0.00 0.00 0.00 3.13
265 266 2.981140 CGTCCTCTTCTCTTCGTGTTTC 59.019 50.000 0.00 0.00 0.00 2.78
266 267 2.862921 GCGTCCTCTTCTCTTCGTGTTT 60.863 50.000 0.00 0.00 0.00 2.83
267 268 1.336056 GCGTCCTCTTCTCTTCGTGTT 60.336 52.381 0.00 0.00 0.00 3.32
268 269 0.241481 GCGTCCTCTTCTCTTCGTGT 59.759 55.000 0.00 0.00 0.00 4.49
269 270 0.523966 AGCGTCCTCTTCTCTTCGTG 59.476 55.000 0.00 0.00 0.00 4.35
270 271 0.523966 CAGCGTCCTCTTCTCTTCGT 59.476 55.000 0.00 0.00 0.00 3.85
271 272 0.179150 CCAGCGTCCTCTTCTCTTCG 60.179 60.000 0.00 0.00 0.00 3.79
272 273 0.174617 CCCAGCGTCCTCTTCTCTTC 59.825 60.000 0.00 0.00 0.00 2.87
273 274 0.543174 ACCCAGCGTCCTCTTCTCTT 60.543 55.000 0.00 0.00 0.00 2.85
274 275 1.077625 ACCCAGCGTCCTCTTCTCT 59.922 57.895 0.00 0.00 0.00 3.10
275 276 1.216710 CACCCAGCGTCCTCTTCTC 59.783 63.158 0.00 0.00 0.00 2.87
276 277 2.286523 CCACCCAGCGTCCTCTTCT 61.287 63.158 0.00 0.00 0.00 2.85
277 278 2.232298 CTCCACCCAGCGTCCTCTTC 62.232 65.000 0.00 0.00 0.00 2.87
278 279 2.203788 TCCACCCAGCGTCCTCTT 60.204 61.111 0.00 0.00 0.00 2.85
279 280 2.681778 CTCCACCCAGCGTCCTCT 60.682 66.667 0.00 0.00 0.00 3.69
280 281 2.680352 TCTCCACCCAGCGTCCTC 60.680 66.667 0.00 0.00 0.00 3.71
281 282 2.681778 CTCTCCACCCAGCGTCCT 60.682 66.667 0.00 0.00 0.00 3.85
282 283 2.283529 TTCTCTCCACCCAGCGTCC 61.284 63.158 0.00 0.00 0.00 4.79
283 284 1.079750 GTTCTCTCCACCCAGCGTC 60.080 63.158 0.00 0.00 0.00 5.19
284 285 2.584391 GGTTCTCTCCACCCAGCGT 61.584 63.158 0.00 0.00 0.00 5.07
285 286 2.266055 GGTTCTCTCCACCCAGCG 59.734 66.667 0.00 0.00 0.00 5.18
290 291 1.338890 GCCCTAGGGTTCTCTCCACC 61.339 65.000 28.96 4.28 37.65 4.61
291 292 0.617820 TGCCCTAGGGTTCTCTCCAC 60.618 60.000 28.96 9.41 37.65 4.02
292 293 0.343372 ATGCCCTAGGGTTCTCTCCA 59.657 55.000 28.96 16.38 37.65 3.86
293 294 1.141858 CAATGCCCTAGGGTTCTCTCC 59.858 57.143 28.96 10.91 37.65 3.71
294 295 1.141858 CCAATGCCCTAGGGTTCTCTC 59.858 57.143 28.96 11.66 37.65 3.20
295 296 1.216990 CCAATGCCCTAGGGTTCTCT 58.783 55.000 28.96 6.92 37.65 3.10
296 297 0.183731 CCCAATGCCCTAGGGTTCTC 59.816 60.000 28.96 12.80 37.81 2.87
297 298 1.937924 GCCCAATGCCCTAGGGTTCT 61.938 60.000 28.96 11.18 44.69 3.01
298 299 1.455773 GCCCAATGCCCTAGGGTTC 60.456 63.158 28.96 13.95 44.69 3.62
299 300 1.518431 AAGCCCAATGCCCTAGGGTT 61.518 55.000 28.96 13.77 44.69 4.11
300 301 1.518431 AAAGCCCAATGCCCTAGGGT 61.518 55.000 28.96 7.48 44.69 4.34
301 302 0.325577 AAAAGCCCAATGCCCTAGGG 60.326 55.000 24.89 24.89 45.68 3.53
302 303 2.452600 TAAAAGCCCAATGCCCTAGG 57.547 50.000 0.06 0.06 42.71 3.02
303 304 3.826729 GGTATAAAAGCCCAATGCCCTAG 59.173 47.826 0.00 0.00 42.71 3.02
304 305 3.465588 AGGTATAAAAGCCCAATGCCCTA 59.534 43.478 0.00 0.00 42.71 3.53
305 306 2.247372 AGGTATAAAAGCCCAATGCCCT 59.753 45.455 0.00 0.00 42.71 5.19
306 307 2.628178 GAGGTATAAAAGCCCAATGCCC 59.372 50.000 0.00 0.00 42.71 5.36
307 308 2.628178 GGAGGTATAAAAGCCCAATGCC 59.372 50.000 0.00 0.00 42.71 4.40
308 309 3.319122 CAGGAGGTATAAAAGCCCAATGC 59.681 47.826 0.00 0.00 41.71 3.56
309 310 4.580580 GTCAGGAGGTATAAAAGCCCAATG 59.419 45.833 0.00 0.00 0.00 2.82
310 311 4.686122 CGTCAGGAGGTATAAAAGCCCAAT 60.686 45.833 0.00 0.00 0.00 3.16
311 312 3.370103 CGTCAGGAGGTATAAAAGCCCAA 60.370 47.826 0.00 0.00 0.00 4.12
312 313 2.169769 CGTCAGGAGGTATAAAAGCCCA 59.830 50.000 0.00 0.00 0.00 5.36
313 314 2.433239 TCGTCAGGAGGTATAAAAGCCC 59.567 50.000 0.00 0.00 0.00 5.19
314 315 3.814005 TCGTCAGGAGGTATAAAAGCC 57.186 47.619 0.00 0.00 0.00 4.35
315 316 6.238402 GGAATTTCGTCAGGAGGTATAAAAGC 60.238 42.308 0.00 0.00 0.00 3.51
316 317 6.260271 GGGAATTTCGTCAGGAGGTATAAAAG 59.740 42.308 0.00 0.00 0.00 2.27
317 318 6.069847 AGGGAATTTCGTCAGGAGGTATAAAA 60.070 38.462 0.00 0.00 0.00 1.52
318 319 5.427481 AGGGAATTTCGTCAGGAGGTATAAA 59.573 40.000 0.00 0.00 0.00 1.40
319 320 4.966805 AGGGAATTTCGTCAGGAGGTATAA 59.033 41.667 0.00 0.00 0.00 0.98
320 321 4.553678 AGGGAATTTCGTCAGGAGGTATA 58.446 43.478 0.00 0.00 0.00 1.47
321 322 3.385115 AGGGAATTTCGTCAGGAGGTAT 58.615 45.455 0.00 0.00 0.00 2.73
322 323 2.764572 GAGGGAATTTCGTCAGGAGGTA 59.235 50.000 1.42 0.00 0.00 3.08
323 324 1.555533 GAGGGAATTTCGTCAGGAGGT 59.444 52.381 1.42 0.00 0.00 3.85
324 325 1.471676 CGAGGGAATTTCGTCAGGAGG 60.472 57.143 7.20 0.00 33.57 4.30
325 326 1.471676 CCGAGGGAATTTCGTCAGGAG 60.472 57.143 7.20 0.00 36.37 3.69
326 327 0.535335 CCGAGGGAATTTCGTCAGGA 59.465 55.000 7.20 0.00 36.37 3.86
327 328 1.090052 GCCGAGGGAATTTCGTCAGG 61.090 60.000 7.20 9.35 36.37 3.86
328 329 1.421410 CGCCGAGGGAATTTCGTCAG 61.421 60.000 7.20 0.00 36.37 3.51
329 330 1.447140 CGCCGAGGGAATTTCGTCA 60.447 57.895 7.20 0.00 36.37 4.35
330 331 2.171725 CCGCCGAGGGAATTTCGTC 61.172 63.158 0.00 0.00 36.37 4.20
331 332 2.125269 CCGCCGAGGGAATTTCGT 60.125 61.111 0.00 0.00 36.37 3.85
341 342 1.802337 TATTCCGATGTCCCGCCGAG 61.802 60.000 0.00 0.00 0.00 4.63
342 343 1.393487 TTATTCCGATGTCCCGCCGA 61.393 55.000 0.00 0.00 0.00 5.54
343 344 1.068417 TTATTCCGATGTCCCGCCG 59.932 57.895 0.00 0.00 0.00 6.46
344 345 0.179067 TGTTATTCCGATGTCCCGCC 60.179 55.000 0.00 0.00 0.00 6.13
345 346 0.935196 GTGTTATTCCGATGTCCCGC 59.065 55.000 0.00 0.00 0.00 6.13
346 347 1.205657 CGTGTTATTCCGATGTCCCG 58.794 55.000 0.00 0.00 0.00 5.14
347 348 0.935196 GCGTGTTATTCCGATGTCCC 59.065 55.000 0.00 0.00 0.00 4.46
348 349 0.575390 CGCGTGTTATTCCGATGTCC 59.425 55.000 0.00 0.00 0.00 4.02
349 350 1.552226 TCGCGTGTTATTCCGATGTC 58.448 50.000 5.77 0.00 0.00 3.06
350 351 1.858458 CATCGCGTGTTATTCCGATGT 59.142 47.619 5.77 0.00 46.99 3.06
352 353 1.497991 CCATCGCGTGTTATTCCGAT 58.502 50.000 5.77 0.00 40.65 4.18
353 354 1.149361 GCCATCGCGTGTTATTCCGA 61.149 55.000 5.77 0.00 0.00 4.55
354 355 1.275657 GCCATCGCGTGTTATTCCG 59.724 57.895 5.77 0.00 0.00 4.30
355 356 0.027586 GTGCCATCGCGTGTTATTCC 59.972 55.000 5.77 0.00 38.08 3.01
356 357 0.724549 TGTGCCATCGCGTGTTATTC 59.275 50.000 5.77 0.00 38.08 1.75
357 358 1.130373 CTTGTGCCATCGCGTGTTATT 59.870 47.619 5.77 0.00 38.08 1.40
358 359 0.726827 CTTGTGCCATCGCGTGTTAT 59.273 50.000 5.77 0.00 38.08 1.89
359 360 0.319986 TCTTGTGCCATCGCGTGTTA 60.320 50.000 5.77 0.00 38.08 2.41
360 361 0.955428 ATCTTGTGCCATCGCGTGTT 60.955 50.000 5.77 0.00 38.08 3.32
361 362 0.955428 AATCTTGTGCCATCGCGTGT 60.955 50.000 5.77 0.00 38.08 4.49
362 363 0.168788 AAATCTTGTGCCATCGCGTG 59.831 50.000 5.77 3.64 38.08 5.34
363 364 0.881118 AAAATCTTGTGCCATCGCGT 59.119 45.000 5.77 0.00 38.08 6.01
364 365 1.981254 AAAAATCTTGTGCCATCGCG 58.019 45.000 0.00 0.00 38.08 5.87
365 366 3.608073 GTGTAAAAATCTTGTGCCATCGC 59.392 43.478 0.00 0.00 0.00 4.58
366 367 4.853196 CAGTGTAAAAATCTTGTGCCATCG 59.147 41.667 0.00 0.00 0.00 3.84
367 368 5.772521 ACAGTGTAAAAATCTTGTGCCATC 58.227 37.500 0.00 0.00 0.00 3.51
368 369 5.789643 ACAGTGTAAAAATCTTGTGCCAT 57.210 34.783 0.00 0.00 0.00 4.40
369 370 5.590530 AACAGTGTAAAAATCTTGTGCCA 57.409 34.783 0.00 0.00 0.00 4.92
370 371 5.173131 CGAAACAGTGTAAAAATCTTGTGCC 59.827 40.000 0.00 0.00 0.00 5.01
371 372 5.968848 TCGAAACAGTGTAAAAATCTTGTGC 59.031 36.000 0.00 0.00 0.00 4.57
372 373 7.323656 GGATCGAAACAGTGTAAAAATCTTGTG 59.676 37.037 0.00 0.00 0.00 3.33
373 374 7.012894 TGGATCGAAACAGTGTAAAAATCTTGT 59.987 33.333 0.00 0.00 0.00 3.16
374 375 7.323656 GTGGATCGAAACAGTGTAAAAATCTTG 59.676 37.037 0.00 0.00 0.00 3.02
375 376 7.012894 TGTGGATCGAAACAGTGTAAAAATCTT 59.987 33.333 0.00 0.00 0.00 2.40
376 377 6.485313 TGTGGATCGAAACAGTGTAAAAATCT 59.515 34.615 0.00 0.00 0.00 2.40
377 378 6.664515 TGTGGATCGAAACAGTGTAAAAATC 58.335 36.000 0.00 0.00 0.00 2.17
378 379 6.627395 TGTGGATCGAAACAGTGTAAAAAT 57.373 33.333 0.00 0.00 0.00 1.82
379 380 6.055231 CTGTGGATCGAAACAGTGTAAAAA 57.945 37.500 14.75 0.00 39.17 1.94
380 381 5.666969 CTGTGGATCGAAACAGTGTAAAA 57.333 39.130 14.75 0.00 39.17 1.52
388 389 5.661056 AAGAGATACTGTGGATCGAAACA 57.339 39.130 0.00 0.00 0.00 2.83
389 390 7.921214 TCATAAAGAGATACTGTGGATCGAAAC 59.079 37.037 0.00 0.00 0.00 2.78
390 391 8.007405 TCATAAAGAGATACTGTGGATCGAAA 57.993 34.615 0.00 0.00 0.00 3.46
391 392 7.582667 TCATAAAGAGATACTGTGGATCGAA 57.417 36.000 0.00 0.00 0.00 3.71
392 393 7.361286 CGATCATAAAGAGATACTGTGGATCGA 60.361 40.741 0.35 0.00 44.57 3.59
393 394 6.744993 CGATCATAAAGAGATACTGTGGATCG 59.255 42.308 0.00 0.00 40.89 3.69
394 395 7.821652 TCGATCATAAAGAGATACTGTGGATC 58.178 38.462 0.00 0.00 31.00 3.36
395 396 7.767250 TCGATCATAAAGAGATACTGTGGAT 57.233 36.000 0.00 0.00 0.00 3.41
396 397 7.426410 GTTCGATCATAAAGAGATACTGTGGA 58.574 38.462 0.00 0.00 0.00 4.02
397 398 6.360947 CGTTCGATCATAAAGAGATACTGTGG 59.639 42.308 0.00 0.00 0.00 4.17
398 399 6.913132 ACGTTCGATCATAAAGAGATACTGTG 59.087 38.462 0.00 0.00 0.00 3.66
399 400 7.012515 AGACGTTCGATCATAAAGAGATACTGT 59.987 37.037 0.00 0.00 0.00 3.55
400 401 7.356540 AGACGTTCGATCATAAAGAGATACTG 58.643 38.462 0.00 0.00 0.00 2.74
401 402 7.226918 TGAGACGTTCGATCATAAAGAGATACT 59.773 37.037 0.00 0.00 0.00 2.12
402 403 7.353497 TGAGACGTTCGATCATAAAGAGATAC 58.647 38.462 0.00 0.00 0.00 2.24
403 404 7.492352 TGAGACGTTCGATCATAAAGAGATA 57.508 36.000 0.00 0.00 0.00 1.98
404 405 6.378710 TGAGACGTTCGATCATAAAGAGAT 57.621 37.500 0.00 0.00 0.00 2.75
405 406 5.813080 TGAGACGTTCGATCATAAAGAGA 57.187 39.130 0.00 0.00 0.00 3.10
406 407 8.233868 AGATATGAGACGTTCGATCATAAAGAG 58.766 37.037 19.33 0.00 38.89 2.85
407 408 8.100508 AGATATGAGACGTTCGATCATAAAGA 57.899 34.615 19.33 7.70 38.89 2.52
408 409 8.233868 AGAGATATGAGACGTTCGATCATAAAG 58.766 37.037 19.33 0.00 38.89 1.85
409 410 8.100508 AGAGATATGAGACGTTCGATCATAAA 57.899 34.615 19.33 8.39 38.89 1.40
410 411 7.148390 GGAGAGATATGAGACGTTCGATCATAA 60.148 40.741 19.33 10.08 38.89 1.90
411 412 6.314152 GGAGAGATATGAGACGTTCGATCATA 59.686 42.308 18.47 18.47 39.53 2.15
412 413 5.123186 GGAGAGATATGAGACGTTCGATCAT 59.877 44.000 16.38 16.38 37.44 2.45
413 414 4.452795 GGAGAGATATGAGACGTTCGATCA 59.547 45.833 0.00 3.59 0.00 2.92
414 415 4.452795 TGGAGAGATATGAGACGTTCGATC 59.547 45.833 0.00 0.00 0.00 3.69
415 416 4.390264 TGGAGAGATATGAGACGTTCGAT 58.610 43.478 0.00 0.00 0.00 3.59
416 417 3.805207 TGGAGAGATATGAGACGTTCGA 58.195 45.455 0.00 0.00 0.00 3.71
417 418 4.757799 ATGGAGAGATATGAGACGTTCG 57.242 45.455 0.00 0.00 0.00 3.95
418 419 7.302524 GTCTAATGGAGAGATATGAGACGTTC 58.697 42.308 0.00 0.00 33.72 3.95
419 420 6.072948 CGTCTAATGGAGAGATATGAGACGTT 60.073 42.308 13.38 0.00 46.04 3.99
420 421 5.410132 CGTCTAATGGAGAGATATGAGACGT 59.590 44.000 13.38 0.00 46.04 4.34
421 422 5.863898 CGTCTAATGGAGAGATATGAGACG 58.136 45.833 9.07 9.07 45.99 4.18
422 423 7.465379 CGATCGTCTAATGGAGAGATATGAGAC 60.465 44.444 7.03 0.00 33.72 3.36
423 424 6.536941 CGATCGTCTAATGGAGAGATATGAGA 59.463 42.308 7.03 0.00 33.72 3.27
424 425 6.536941 TCGATCGTCTAATGGAGAGATATGAG 59.463 42.308 15.94 0.00 33.72 2.90
425 426 6.407202 TCGATCGTCTAATGGAGAGATATGA 58.593 40.000 15.94 0.00 33.72 2.15
426 427 6.670077 TCGATCGTCTAATGGAGAGATATG 57.330 41.667 15.94 0.00 33.72 1.78
427 428 6.183360 CGTTCGATCGTCTAATGGAGAGATAT 60.183 42.308 15.94 0.00 33.72 1.63
428 429 5.120363 CGTTCGATCGTCTAATGGAGAGATA 59.880 44.000 15.94 0.00 33.72 1.98
429 430 4.083749 CGTTCGATCGTCTAATGGAGAGAT 60.084 45.833 15.94 0.00 33.72 2.75
430 431 3.247886 CGTTCGATCGTCTAATGGAGAGA 59.752 47.826 15.94 0.00 33.72 3.10
431 432 3.546617 CGTTCGATCGTCTAATGGAGAG 58.453 50.000 15.94 0.00 33.72 3.20
432 433 2.289820 CCGTTCGATCGTCTAATGGAGA 59.710 50.000 17.21 0.00 31.86 3.71
433 434 2.289820 TCCGTTCGATCGTCTAATGGAG 59.710 50.000 19.60 2.44 33.80 3.86
434 435 2.032550 GTCCGTTCGATCGTCTAATGGA 59.967 50.000 19.60 19.60 35.61 3.41
435 436 2.382519 GTCCGTTCGATCGTCTAATGG 58.617 52.381 15.94 16.21 31.56 3.16
436 437 2.034789 CGTCCGTTCGATCGTCTAATG 58.965 52.381 15.94 7.58 0.00 1.90
437 438 1.935873 TCGTCCGTTCGATCGTCTAAT 59.064 47.619 15.94 0.00 34.85 1.73
438 439 1.358877 TCGTCCGTTCGATCGTCTAA 58.641 50.000 15.94 0.00 34.85 2.10
439 440 1.358877 TTCGTCCGTTCGATCGTCTA 58.641 50.000 15.94 0.00 39.57 2.59
440 441 0.518636 TTTCGTCCGTTCGATCGTCT 59.481 50.000 15.94 0.00 39.57 4.18
441 442 1.056865 GTTTTCGTCCGTTCGATCGTC 59.943 52.381 15.94 8.82 39.57 4.20
442 443 1.055338 GTTTTCGTCCGTTCGATCGT 58.945 50.000 15.94 0.00 39.57 3.73
443 444 0.021610 CGTTTTCGTCCGTTCGATCG 59.978 55.000 9.36 9.36 39.57 3.69
444 445 0.246642 GCGTTTTCGTCCGTTCGATC 60.247 55.000 0.00 0.00 46.03 3.69
445 446 0.940519 TGCGTTTTCGTCCGTTCGAT 60.941 50.000 0.00 0.00 46.03 3.59
446 447 0.940519 ATGCGTTTTCGTCCGTTCGA 60.941 50.000 0.00 0.00 46.03 3.71
447 448 0.515717 GATGCGTTTTCGTCCGTTCG 60.516 55.000 0.00 0.00 46.03 3.95
448 449 0.509499 TGATGCGTTTTCGTCCGTTC 59.491 50.000 0.00 0.00 46.03 3.95
449 450 0.938713 TTGATGCGTTTTCGTCCGTT 59.061 45.000 0.00 0.00 46.03 4.44
450 451 0.511221 CTTGATGCGTTTTCGTCCGT 59.489 50.000 0.00 0.00 46.03 4.69
451 452 0.179225 CCTTGATGCGTTTTCGTCCG 60.179 55.000 0.00 0.00 46.03 4.79
452 453 1.136057 GTCCTTGATGCGTTTTCGTCC 60.136 52.381 0.00 0.00 46.03 4.79
453 454 1.136057 GGTCCTTGATGCGTTTTCGTC 60.136 52.381 0.00 0.00 46.03 4.20
454 455 0.872388 GGTCCTTGATGCGTTTTCGT 59.128 50.000 0.00 0.00 46.03 3.85
456 457 2.151202 TCTGGTCCTTGATGCGTTTTC 58.849 47.619 0.00 0.00 0.00 2.29
457 458 2.270352 TCTGGTCCTTGATGCGTTTT 57.730 45.000 0.00 0.00 0.00 2.43
458 459 2.359900 GATCTGGTCCTTGATGCGTTT 58.640 47.619 3.25 0.00 0.00 3.60
459 460 1.407437 GGATCTGGTCCTTGATGCGTT 60.407 52.381 0.00 0.00 44.16 4.84
460 461 0.179000 GGATCTGGTCCTTGATGCGT 59.821 55.000 0.00 0.00 44.16 5.24
461 462 0.877649 CGGATCTGGTCCTTGATGCG 60.878 60.000 18.60 18.60 45.46 4.73
462 463 0.465705 TCGGATCTGGTCCTTGATGC 59.534 55.000 5.25 5.18 45.46 3.91
463 464 1.536922 CGTCGGATCTGGTCCTTGATG 60.537 57.143 5.25 0.00 45.46 3.07
464 465 0.747255 CGTCGGATCTGGTCCTTGAT 59.253 55.000 5.25 0.00 45.46 2.57
465 466 1.320344 CCGTCGGATCTGGTCCTTGA 61.320 60.000 4.91 0.00 45.46 3.02
466 467 1.141881 CCGTCGGATCTGGTCCTTG 59.858 63.158 4.91 0.00 45.46 3.61
467 468 1.305046 ACCGTCGGATCTGGTCCTT 60.305 57.895 20.51 0.00 45.46 3.36
468 469 1.753463 GACCGTCGGATCTGGTCCT 60.753 63.158 20.51 0.00 45.14 3.85
469 470 2.806237 GACCGTCGGATCTGGTCC 59.194 66.667 20.51 0.00 45.14 4.46
471 472 2.052690 CCTGACCGTCGGATCTGGT 61.053 63.158 20.51 0.38 39.12 4.00
472 473 1.320344 TTCCTGACCGTCGGATCTGG 61.320 60.000 20.51 21.77 35.76 3.86
473 474 0.101399 CTTCCTGACCGTCGGATCTG 59.899 60.000 20.51 14.52 0.00 2.90
474 475 1.668101 GCTTCCTGACCGTCGGATCT 61.668 60.000 20.51 0.00 0.00 2.75
475 476 1.227002 GCTTCCTGACCGTCGGATC 60.227 63.158 20.51 12.26 0.00 3.36
476 477 2.893398 GCTTCCTGACCGTCGGAT 59.107 61.111 20.51 1.57 0.00 4.18
477 478 3.744719 CGCTTCCTGACCGTCGGA 61.745 66.667 20.51 8.28 0.00 4.55
480 481 3.909258 TTCGCGCTTCCTGACCGTC 62.909 63.158 5.56 0.00 0.00 4.79
481 482 3.296709 ATTCGCGCTTCCTGACCGT 62.297 57.895 5.56 0.00 0.00 4.83
482 483 2.509336 ATTCGCGCTTCCTGACCG 60.509 61.111 5.56 0.00 0.00 4.79
483 484 2.517450 CGATTCGCGCTTCCTGACC 61.517 63.158 5.56 0.00 0.00 4.02
484 485 2.998667 CGATTCGCGCTTCCTGAC 59.001 61.111 5.56 0.00 0.00 3.51
501 502 3.056328 GAACCCAACGCCCTCAGC 61.056 66.667 0.00 0.00 38.52 4.26
502 503 2.359975 GGAACCCAACGCCCTCAG 60.360 66.667 0.00 0.00 0.00 3.35
503 504 2.852075 AGGAACCCAACGCCCTCA 60.852 61.111 0.00 0.00 0.00 3.86
504 505 2.046217 GAGGAACCCAACGCCCTC 60.046 66.667 0.00 0.00 38.47 4.30
505 506 3.647771 GGAGGAACCCAACGCCCT 61.648 66.667 0.00 0.00 0.00 5.19
514 515 5.011840 GGTAAGATACATACTGGGAGGAACC 59.988 48.000 0.00 0.00 38.08 3.62
515 516 5.011840 GGGTAAGATACATACTGGGAGGAAC 59.988 48.000 0.00 0.00 0.00 3.62
516 517 5.102783 AGGGTAAGATACATACTGGGAGGAA 60.103 44.000 0.00 0.00 0.00 3.36
517 518 4.422592 AGGGTAAGATACATACTGGGAGGA 59.577 45.833 0.00 0.00 0.00 3.71
518 519 4.528596 CAGGGTAAGATACATACTGGGAGG 59.471 50.000 0.00 0.00 0.00 4.30
519 520 5.394738 TCAGGGTAAGATACATACTGGGAG 58.605 45.833 0.00 0.00 31.63 4.30
520 521 5.412617 TCAGGGTAAGATACATACTGGGA 57.587 43.478 0.00 0.00 31.63 4.37
521 522 6.295916 GGAATCAGGGTAAGATACATACTGGG 60.296 46.154 0.00 0.00 31.63 4.45
522 523 6.498651 AGGAATCAGGGTAAGATACATACTGG 59.501 42.308 0.00 0.00 31.63 4.00
523 524 7.546250 AGGAATCAGGGTAAGATACATACTG 57.454 40.000 0.00 0.00 0.00 2.74
524 525 8.432805 CAAAGGAATCAGGGTAAGATACATACT 58.567 37.037 0.00 0.00 0.00 2.12
525 526 8.211629 ACAAAGGAATCAGGGTAAGATACATAC 58.788 37.037 0.00 0.00 0.00 2.39
526 527 8.331931 ACAAAGGAATCAGGGTAAGATACATA 57.668 34.615 0.00 0.00 0.00 2.29
527 528 7.213178 ACAAAGGAATCAGGGTAAGATACAT 57.787 36.000 0.00 0.00 0.00 2.29
528 529 6.352737 GGACAAAGGAATCAGGGTAAGATACA 60.353 42.308 0.00 0.00 0.00 2.29
529 530 6.056236 GGACAAAGGAATCAGGGTAAGATAC 58.944 44.000 0.00 0.00 0.00 2.24
530 531 5.970640 AGGACAAAGGAATCAGGGTAAGATA 59.029 40.000 0.00 0.00 0.00 1.98
531 532 4.790790 AGGACAAAGGAATCAGGGTAAGAT 59.209 41.667 0.00 0.00 0.00 2.40
532 533 4.175962 AGGACAAAGGAATCAGGGTAAGA 58.824 43.478 0.00 0.00 0.00 2.10
533 534 4.576330 AGGACAAAGGAATCAGGGTAAG 57.424 45.455 0.00 0.00 0.00 2.34
534 535 5.132144 GGATAGGACAAAGGAATCAGGGTAA 59.868 44.000 0.00 0.00 0.00 2.85
535 536 4.658901 GGATAGGACAAAGGAATCAGGGTA 59.341 45.833 0.00 0.00 0.00 3.69
536 537 3.459969 GGATAGGACAAAGGAATCAGGGT 59.540 47.826 0.00 0.00 0.00 4.34
537 538 3.718956 AGGATAGGACAAAGGAATCAGGG 59.281 47.826 0.00 0.00 0.00 4.45
538 539 6.043706 ACATAGGATAGGACAAAGGAATCAGG 59.956 42.308 0.00 0.00 0.00 3.86
539 540 7.072263 ACATAGGATAGGACAAAGGAATCAG 57.928 40.000 0.00 0.00 0.00 2.90
540 541 8.597167 CATACATAGGATAGGACAAAGGAATCA 58.403 37.037 0.00 0.00 0.00 2.57
541 542 7.550906 GCATACATAGGATAGGACAAAGGAATC 59.449 40.741 0.00 0.00 0.00 2.52
615 627 1.892209 CAAAACCCTTAGACCTGCGT 58.108 50.000 0.00 0.00 0.00 5.24
771 784 4.340097 GGTTGCTTGGGGTGGTATTTATAC 59.660 45.833 0.00 0.00 0.00 1.47
858 1129 4.380233 GCTATGCTGATGAAACAAGTTGCT 60.380 41.667 1.81 0.00 0.00 3.91
861 1132 5.710513 TTGCTATGCTGATGAAACAAGTT 57.289 34.783 0.00 0.00 0.00 2.66
905 1176 1.536662 AGGTTCAGGGCGAGGAAGT 60.537 57.895 0.00 0.00 0.00 3.01
1141 1413 4.121669 GCAGCAGTCCTCGCTCGA 62.122 66.667 0.00 0.00 37.72 4.04
1171 1443 4.070552 GTCGAGGTCGGCAAGCCT 62.071 66.667 9.73 0.00 44.43 4.58
1257 1592 1.251527 GGTTGAGGAGGAGCACGAGA 61.252 60.000 0.00 0.00 0.00 4.04
1351 2010 0.096976 CCACGACGATGCATGGTTTC 59.903 55.000 15.94 3.25 0.00 2.78
1409 2088 7.166167 ACTGGAAGAGGAAACAAAATACGTAT 58.834 34.615 1.14 1.14 37.43 3.06
1435 2114 1.514228 CGAGTGGTGATGACGACGG 60.514 63.158 0.00 0.00 36.02 4.79
1594 2273 3.181455 ACAAGCTGGCAATATATCACGGA 60.181 43.478 0.00 0.00 0.00 4.69
1631 2310 7.935755 AGACGTGGATCTGATCATAATTCAAAT 59.064 33.333 18.64 0.00 0.00 2.32
1715 2394 7.627300 GCTTAACAAAAAGAAAACCATGCCAAA 60.627 33.333 0.00 0.00 0.00 3.28
1756 2515 1.372582 TCGCAGATGCATGGTTCTTC 58.627 50.000 2.46 0.00 42.21 2.87
1877 2636 3.067180 AGGTCAAAGTGTTGCAACATCAG 59.933 43.478 33.16 22.33 41.59 2.90
1965 2731 1.002430 TCAAAAGCGATCTGGTCAGCT 59.998 47.619 2.23 2.23 37.98 4.24
2044 2812 1.606668 GTGATGTTCGTGGAGCCAAAA 59.393 47.619 0.00 0.00 0.00 2.44
2088 2859 8.703604 ACACTACATTCATGTGTGTTATAGAC 57.296 34.615 16.14 0.00 43.57 2.59
2118 2892 6.292061 GCTAGACGATGCTAAATGACTTTCAG 60.292 42.308 0.00 0.00 0.00 3.02
2244 3032 7.269084 GCATATGTTTGATACACGCATTCATAC 59.731 37.037 4.29 0.00 40.19 2.39
2247 3035 5.296531 AGCATATGTTTGATACACGCATTCA 59.703 36.000 4.29 0.00 40.19 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.