Multiple sequence alignment - TraesCS4B01G362100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G362100 chr4B 100.000 2897 0 0 1 2897 651020982 651023878 0.000000e+00 5350.0
1 TraesCS4B01G362100 chr4B 95.782 1375 22 9 573 1917 651752441 651753809 0.000000e+00 2185.0
2 TraesCS4B01G362100 chr4B 95.718 1378 23 9 573 1920 651770710 651769339 0.000000e+00 2185.0
3 TraesCS4B01G362100 chr4B 93.260 549 32 4 1349 1897 651768745 651768202 0.000000e+00 804.0
4 TraesCS4B01G362100 chr4B 91.848 552 39 3 2345 2895 651754308 651754854 0.000000e+00 765.0
5 TraesCS4B01G362100 chr4B 88.386 508 29 10 1918 2403 651769304 651768805 4.160000e-163 584.0
6 TraesCS4B01G362100 chr4B 88.671 459 29 13 1918 2361 651753847 651754297 3.280000e-149 538.0
7 TraesCS4B01G362100 chr4B 92.823 209 15 0 2684 2892 651768438 651768230 1.300000e-78 303.0
8 TraesCS4B01G362100 chr5A 91.198 1954 104 35 753 2668 688989246 688991169 0.000000e+00 2593.0
9 TraesCS4B01G362100 chr5A 97.347 867 18 1 998 1864 689299027 689299888 0.000000e+00 1469.0
10 TraesCS4B01G362100 chr5A 86.635 636 50 9 1917 2527 689029091 689029716 0.000000e+00 671.0
11 TraesCS4B01G362100 chr5A 90.033 301 30 0 1535 1835 689028689 689028989 9.730000e-105 390.0
12 TraesCS4B01G362100 chr5A 92.222 180 14 0 2684 2863 689028810 689028989 3.700000e-64 255.0
13 TraesCS4B01G362100 chr5A 94.118 153 8 1 2517 2668 689033924 689034076 6.240000e-57 231.0
14 TraesCS4B01G362100 chr5A 90.805 87 6 1 472 556 55273896 55273982 6.560000e-22 115.0
15 TraesCS4B01G362100 chr5A 94.340 53 3 0 1947 1999 689300045 689300097 6.650000e-12 82.4
16 TraesCS4B01G362100 chr4D 92.015 1340 35 24 573 1863 504344420 504345736 0.000000e+00 1816.0
17 TraesCS4B01G362100 chr4D 92.015 1340 35 24 573 1863 505189978 505188662 0.000000e+00 1816.0
18 TraesCS4B01G362100 chr4D 97.206 859 20 1 1045 1903 504996493 504997347 0.000000e+00 1450.0
19 TraesCS4B01G362100 chr4D 91.180 771 40 7 1917 2668 504345811 504346572 0.000000e+00 1022.0
20 TraesCS4B01G362100 chr4D 91.180 771 40 7 1917 2668 505188587 505187826 0.000000e+00 1022.0
21 TraesCS4B01G362100 chr4D 84.553 369 45 12 76 438 306427836 306427474 3.550000e-94 355.0
22 TraesCS4B01G362100 chr2D 90.508 453 24 7 1 438 103063637 103064085 5.380000e-162 580.0
23 TraesCS4B01G362100 chr2D 86.133 375 28 7 76 438 651701425 651701063 1.630000e-102 383.0
24 TraesCS4B01G362100 chr2D 83.733 375 37 5 76 438 60175506 60175144 1.660000e-87 333.0
25 TraesCS4B01G362100 chr2B 87.140 451 38 6 7 438 665150262 665149813 7.210000e-136 494.0
26 TraesCS4B01G362100 chr2B 84.024 338 32 11 112 438 438604926 438604600 3.630000e-79 305.0
27 TraesCS4B01G362100 chr2B 96.053 76 2 1 472 547 665182343 665182417 3.920000e-24 122.0
28 TraesCS4B01G362100 chr1D 86.117 461 35 5 7 438 390410388 390409928 1.220000e-128 470.0
29 TraesCS4B01G362100 chr1D 85.714 392 26 8 76 438 359697090 359696700 1.260000e-103 387.0
30 TraesCS4B01G362100 chr1D 90.347 259 14 2 1 249 38905760 38906017 2.150000e-86 329.0
31 TraesCS4B01G362100 chr2A 83.673 441 59 8 2238 2668 101032854 101032417 1.250000e-108 403.0
32 TraesCS4B01G362100 chr3D 87.842 329 37 3 112 438 611900167 611900494 1.630000e-102 383.0
33 TraesCS4B01G362100 chr7A 82.727 440 50 16 1 438 13854908 13855323 4.560000e-98 368.0
34 TraesCS4B01G362100 chr1A 83.461 393 32 7 76 436 554557322 554557713 4.630000e-88 335.0
35 TraesCS4B01G362100 chr1A 94.937 79 3 1 467 545 512475728 512475651 3.920000e-24 122.0
36 TraesCS4B01G362100 chr5D 83.081 396 31 8 76 438 387823380 387823772 7.740000e-86 327.0
37 TraesCS4B01G362100 chr5D 82.653 392 28 6 76 438 370737052 370736672 7.800000e-81 311.0
38 TraesCS4B01G362100 chr1B 80.942 446 53 19 1 438 659947384 659947805 1.000000e-84 324.0
39 TraesCS4B01G362100 chr3A 81.857 237 37 5 2433 2668 554088284 554088053 8.190000e-46 195.0
40 TraesCS4B01G362100 chr5B 96.053 76 3 0 472 547 6592371 6592296 1.090000e-24 124.0
41 TraesCS4B01G362100 chr5B 90.909 88 4 3 464 547 629971884 629971797 6.560000e-22 115.0
42 TraesCS4B01G362100 chr6A 89.899 99 4 4 464 556 66269496 66269594 3.920000e-24 122.0
43 TraesCS4B01G362100 chr6A 88.889 99 5 4 464 556 66266771 66266673 1.820000e-22 117.0
44 TraesCS4B01G362100 chr4A 90.805 87 6 1 472 556 532160493 532160407 6.560000e-22 115.0
45 TraesCS4B01G362100 chr3B 87.879 99 6 4 464 556 42176117 42176215 8.490000e-21 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G362100 chr4B 651020982 651023878 2896 False 5350.000000 5350 100.000000 1 2897 1 chr4B.!!$F1 2896
1 TraesCS4B01G362100 chr4B 651752441 651754854 2413 False 1162.666667 2185 92.100333 573 2895 3 chr4B.!!$F2 2322
2 TraesCS4B01G362100 chr4B 651768202 651770710 2508 True 969.000000 2185 92.546750 573 2892 4 chr4B.!!$R1 2319
3 TraesCS4B01G362100 chr5A 688989246 688991169 1923 False 2593.000000 2593 91.198000 753 2668 1 chr5A.!!$F2 1915
4 TraesCS4B01G362100 chr5A 689299027 689300097 1070 False 775.700000 1469 95.843500 998 1999 2 chr5A.!!$F5 1001
5 TraesCS4B01G362100 chr5A 689028689 689029716 1027 False 438.666667 671 89.630000 1535 2863 3 chr5A.!!$F4 1328
6 TraesCS4B01G362100 chr4D 504996493 504997347 854 False 1450.000000 1450 97.206000 1045 1903 1 chr4D.!!$F1 858
7 TraesCS4B01G362100 chr4D 504344420 504346572 2152 False 1419.000000 1816 91.597500 573 2668 2 chr4D.!!$F2 2095
8 TraesCS4B01G362100 chr4D 505187826 505189978 2152 True 1419.000000 1816 91.597500 573 2668 2 chr4D.!!$R2 2095

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
475 476 0.035439 ACATGATTGACCGGTCCACC 60.035 55.0 31.19 13.23 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2414 2632 0.250727 CTCCGAGTTTTGCCTTCCCA 60.251 55.0 0.0 0.0 0.0 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.939066 GTAGGAGCCTACAACATTGTGT 58.061 45.455 19.25 0.00 45.90 3.72
26 27 5.080969 GTAGGAGCCTACAACATTGTGTA 57.919 43.478 19.25 0.00 45.90 2.90
27 28 3.939066 AGGAGCCTACAACATTGTGTAC 58.061 45.455 7.53 0.00 42.31 2.90
28 29 3.326588 AGGAGCCTACAACATTGTGTACA 59.673 43.478 7.53 0.00 42.31 2.90
29 30 4.069304 GGAGCCTACAACATTGTGTACAA 58.931 43.478 7.53 0.00 42.31 2.41
30 31 4.083484 GGAGCCTACAACATTGTGTACAAC 60.083 45.833 7.53 0.00 42.31 3.32
31 32 4.456535 AGCCTACAACATTGTGTACAACA 58.543 39.130 7.53 0.00 42.31 3.33
43 44 5.651172 TGTGTACAACAAATTCTCGTCAG 57.349 39.130 0.00 0.00 35.24 3.51
44 45 4.025229 TGTGTACAACAAATTCTCGTCAGC 60.025 41.667 0.00 0.00 35.24 4.26
45 46 4.025229 GTGTACAACAAATTCTCGTCAGCA 60.025 41.667 0.00 0.00 0.00 4.41
46 47 4.572795 TGTACAACAAATTCTCGTCAGCAA 59.427 37.500 0.00 0.00 0.00 3.91
47 48 4.630894 ACAACAAATTCTCGTCAGCAAA 57.369 36.364 0.00 0.00 0.00 3.68
48 49 4.601019 ACAACAAATTCTCGTCAGCAAAG 58.399 39.130 0.00 0.00 0.00 2.77
49 50 4.335315 ACAACAAATTCTCGTCAGCAAAGA 59.665 37.500 0.00 0.00 0.00 2.52
50 51 4.739046 ACAAATTCTCGTCAGCAAAGAG 57.261 40.909 0.00 0.00 35.08 2.85
51 52 3.499918 ACAAATTCTCGTCAGCAAAGAGG 59.500 43.478 3.06 0.00 34.58 3.69
52 53 1.731720 ATTCTCGTCAGCAAAGAGGC 58.268 50.000 3.06 0.00 34.58 4.70
53 54 0.392706 TTCTCGTCAGCAAAGAGGCA 59.607 50.000 3.06 0.00 34.58 4.75
54 55 0.037882 TCTCGTCAGCAAAGAGGCAG 60.038 55.000 3.06 0.00 34.58 4.85
55 56 0.037882 CTCGTCAGCAAAGAGGCAGA 60.038 55.000 0.00 0.00 35.83 4.26
56 57 0.319900 TCGTCAGCAAAGAGGCAGAC 60.320 55.000 0.00 0.00 44.11 3.51
57 58 0.601046 CGTCAGCAAAGAGGCAGACA 60.601 55.000 10.52 0.00 46.81 3.41
58 59 1.818642 GTCAGCAAAGAGGCAGACAT 58.181 50.000 5.92 0.00 46.04 3.06
59 60 1.736681 GTCAGCAAAGAGGCAGACATC 59.263 52.381 5.92 0.00 46.04 3.06
60 61 0.725686 CAGCAAAGAGGCAGACATCG 59.274 55.000 0.00 0.00 35.83 3.84
61 62 0.610174 AGCAAAGAGGCAGACATCGA 59.390 50.000 0.00 0.00 35.83 3.59
62 63 1.002430 AGCAAAGAGGCAGACATCGAA 59.998 47.619 0.00 0.00 35.83 3.71
63 64 2.012673 GCAAAGAGGCAGACATCGAAT 58.987 47.619 0.00 0.00 0.00 3.34
64 65 3.118629 AGCAAAGAGGCAGACATCGAATA 60.119 43.478 0.00 0.00 35.83 1.75
65 66 3.001736 GCAAAGAGGCAGACATCGAATAC 59.998 47.826 0.00 0.00 0.00 1.89
66 67 3.460857 AAGAGGCAGACATCGAATACC 57.539 47.619 0.00 0.00 0.00 2.73
67 68 2.672098 AGAGGCAGACATCGAATACCT 58.328 47.619 0.00 0.00 0.00 3.08
68 69 3.833732 AGAGGCAGACATCGAATACCTA 58.166 45.455 0.00 0.00 0.00 3.08
69 70 4.215908 AGAGGCAGACATCGAATACCTAA 58.784 43.478 0.00 0.00 0.00 2.69
70 71 4.038162 AGAGGCAGACATCGAATACCTAAC 59.962 45.833 0.00 0.00 0.00 2.34
71 72 3.961408 AGGCAGACATCGAATACCTAACT 59.039 43.478 0.00 0.00 0.00 2.24
72 73 5.138276 AGGCAGACATCGAATACCTAACTA 58.862 41.667 0.00 0.00 0.00 2.24
73 74 5.009811 AGGCAGACATCGAATACCTAACTAC 59.990 44.000 0.00 0.00 0.00 2.73
74 75 5.009811 GGCAGACATCGAATACCTAACTACT 59.990 44.000 0.00 0.00 0.00 2.57
75 76 5.915758 GCAGACATCGAATACCTAACTACTG 59.084 44.000 0.00 0.00 0.00 2.74
76 77 5.915758 CAGACATCGAATACCTAACTACTGC 59.084 44.000 0.00 0.00 0.00 4.40
77 78 5.593095 AGACATCGAATACCTAACTACTGCA 59.407 40.000 0.00 0.00 0.00 4.41
78 79 6.265649 AGACATCGAATACCTAACTACTGCAT 59.734 38.462 0.00 0.00 0.00 3.96
79 80 6.448006 ACATCGAATACCTAACTACTGCATC 58.552 40.000 0.00 0.00 0.00 3.91
80 81 6.040504 ACATCGAATACCTAACTACTGCATCA 59.959 38.462 0.00 0.00 0.00 3.07
81 82 6.650427 TCGAATACCTAACTACTGCATCAT 57.350 37.500 0.00 0.00 0.00 2.45
82 83 6.678878 TCGAATACCTAACTACTGCATCATC 58.321 40.000 0.00 0.00 0.00 2.92
83 84 6.490381 TCGAATACCTAACTACTGCATCATCT 59.510 38.462 0.00 0.00 0.00 2.90
84 85 7.664318 TCGAATACCTAACTACTGCATCATCTA 59.336 37.037 0.00 0.00 0.00 1.98
85 86 8.462811 CGAATACCTAACTACTGCATCATCTAT 58.537 37.037 0.00 0.00 0.00 1.98
86 87 9.579768 GAATACCTAACTACTGCATCATCTATG 57.420 37.037 0.00 0.00 38.74 2.23
101 102 8.503486 CATCATCTATGCTGAAATTTTGCTAC 57.497 34.615 15.00 0.00 0.00 3.58
102 103 7.870509 TCATCTATGCTGAAATTTTGCTACT 57.129 32.000 15.00 5.99 0.00 2.57
103 104 7.923888 TCATCTATGCTGAAATTTTGCTACTC 58.076 34.615 15.00 0.00 0.00 2.59
104 105 7.553760 TCATCTATGCTGAAATTTTGCTACTCA 59.446 33.333 15.00 0.00 0.00 3.41
105 106 7.686438 TCTATGCTGAAATTTTGCTACTCAA 57.314 32.000 15.00 0.00 0.00 3.02
106 107 7.755591 TCTATGCTGAAATTTTGCTACTCAAG 58.244 34.615 15.00 6.63 35.84 3.02
107 108 6.579666 ATGCTGAAATTTTGCTACTCAAGA 57.420 33.333 15.00 0.00 35.84 3.02
108 109 6.389830 TGCTGAAATTTTGCTACTCAAGAA 57.610 33.333 15.00 0.00 35.84 2.52
109 110 6.208644 TGCTGAAATTTTGCTACTCAAGAAC 58.791 36.000 15.00 0.00 35.84 3.01
110 111 6.183360 TGCTGAAATTTTGCTACTCAAGAACA 60.183 34.615 15.00 0.00 35.84 3.18
111 112 6.142958 GCTGAAATTTTGCTACTCAAGAACAC 59.857 38.462 9.08 0.00 35.84 3.32
112 113 6.503524 TGAAATTTTGCTACTCAAGAACACC 58.496 36.000 0.00 0.00 35.84 4.16
113 114 6.096141 TGAAATTTTGCTACTCAAGAACACCA 59.904 34.615 0.00 0.00 35.84 4.17
114 115 6.655078 AATTTTGCTACTCAAGAACACCAT 57.345 33.333 0.00 0.00 35.84 3.55
115 116 6.655078 ATTTTGCTACTCAAGAACACCATT 57.345 33.333 0.00 0.00 35.84 3.16
116 117 6.463995 TTTTGCTACTCAAGAACACCATTT 57.536 33.333 0.00 0.00 35.84 2.32
117 118 6.463995 TTTGCTACTCAAGAACACCATTTT 57.536 33.333 0.00 0.00 35.84 1.82
118 119 6.463995 TTGCTACTCAAGAACACCATTTTT 57.536 33.333 0.00 0.00 0.00 1.94
119 120 5.830912 TGCTACTCAAGAACACCATTTTTG 58.169 37.500 0.00 0.00 0.00 2.44
120 121 4.681483 GCTACTCAAGAACACCATTTTTGC 59.319 41.667 0.00 0.00 0.00 3.68
121 122 5.507985 GCTACTCAAGAACACCATTTTTGCT 60.508 40.000 0.00 0.00 0.00 3.91
122 123 6.293955 GCTACTCAAGAACACCATTTTTGCTA 60.294 38.462 0.00 0.00 0.00 3.49
123 124 6.463995 ACTCAAGAACACCATTTTTGCTAA 57.536 33.333 0.00 0.00 0.00 3.09
124 125 6.872920 ACTCAAGAACACCATTTTTGCTAAA 58.127 32.000 0.00 0.00 0.00 1.85
125 126 7.500141 ACTCAAGAACACCATTTTTGCTAAAT 58.500 30.769 0.00 0.00 0.00 1.40
126 127 7.653311 ACTCAAGAACACCATTTTTGCTAAATC 59.347 33.333 0.00 0.00 0.00 2.17
127 128 6.928492 TCAAGAACACCATTTTTGCTAAATCC 59.072 34.615 0.00 0.00 0.00 3.01
128 129 5.793817 AGAACACCATTTTTGCTAAATCCC 58.206 37.500 0.00 0.00 0.00 3.85
129 130 5.543790 AGAACACCATTTTTGCTAAATCCCT 59.456 36.000 0.00 0.00 0.00 4.20
130 131 6.723977 AGAACACCATTTTTGCTAAATCCCTA 59.276 34.615 0.00 0.00 0.00 3.53
131 132 6.926630 ACACCATTTTTGCTAAATCCCTAA 57.073 33.333 0.00 0.00 0.00 2.69
132 133 6.697395 ACACCATTTTTGCTAAATCCCTAAC 58.303 36.000 0.00 0.00 0.00 2.34
133 134 6.496911 ACACCATTTTTGCTAAATCCCTAACT 59.503 34.615 0.00 0.00 0.00 2.24
134 135 6.813152 CACCATTTTTGCTAAATCCCTAACTG 59.187 38.462 0.00 0.00 0.00 3.16
135 136 5.812127 CCATTTTTGCTAAATCCCTAACTGC 59.188 40.000 0.00 0.00 0.00 4.40
136 137 5.400066 TTTTTGCTAAATCCCTAACTGCC 57.600 39.130 0.00 0.00 0.00 4.85
137 138 3.730215 TTGCTAAATCCCTAACTGCCA 57.270 42.857 0.00 0.00 0.00 4.92
138 139 3.951563 TGCTAAATCCCTAACTGCCAT 57.048 42.857 0.00 0.00 0.00 4.40
139 140 5.381184 TTGCTAAATCCCTAACTGCCATA 57.619 39.130 0.00 0.00 0.00 2.74
140 141 4.973168 TGCTAAATCCCTAACTGCCATAG 58.027 43.478 0.00 0.00 0.00 2.23
141 142 4.202461 TGCTAAATCCCTAACTGCCATAGG 60.202 45.833 0.00 0.00 39.76 2.57
159 160 5.992217 CCATAGGCATAGTCAAGAACTAACC 59.008 44.000 0.00 0.00 43.61 2.85
160 161 6.183361 CCATAGGCATAGTCAAGAACTAACCT 60.183 42.308 12.21 12.21 45.82 3.50
161 162 5.346181 AGGCATAGTCAAGAACTAACCTC 57.654 43.478 4.98 0.00 42.93 3.85
162 163 4.777896 AGGCATAGTCAAGAACTAACCTCA 59.222 41.667 4.98 0.00 42.93 3.86
163 164 5.426833 AGGCATAGTCAAGAACTAACCTCAT 59.573 40.000 4.98 0.00 42.93 2.90
164 165 6.069963 AGGCATAGTCAAGAACTAACCTCATT 60.070 38.462 4.98 0.00 42.93 2.57
165 166 6.599638 GGCATAGTCAAGAACTAACCTCATTT 59.400 38.462 0.00 0.00 43.61 2.32
166 167 7.414540 GGCATAGTCAAGAACTAACCTCATTTG 60.415 40.741 0.00 0.00 43.61 2.32
167 168 7.119846 GCATAGTCAAGAACTAACCTCATTTGT 59.880 37.037 0.00 0.00 43.61 2.83
168 169 8.660373 CATAGTCAAGAACTAACCTCATTTGTC 58.340 37.037 0.00 0.00 43.61 3.18
169 170 6.591935 AGTCAAGAACTAACCTCATTTGTCA 58.408 36.000 0.00 0.00 36.07 3.58
170 171 6.483640 AGTCAAGAACTAACCTCATTTGTCAC 59.516 38.462 0.00 0.00 36.07 3.67
171 172 6.260050 GTCAAGAACTAACCTCATTTGTCACA 59.740 38.462 0.00 0.00 0.00 3.58
172 173 6.483307 TCAAGAACTAACCTCATTTGTCACAG 59.517 38.462 0.00 0.00 0.00 3.66
173 174 6.174720 AGAACTAACCTCATTTGTCACAGA 57.825 37.500 0.00 0.00 0.00 3.41
174 175 6.226787 AGAACTAACCTCATTTGTCACAGAG 58.773 40.000 0.00 0.00 0.00 3.35
175 176 5.552870 ACTAACCTCATTTGTCACAGAGT 57.447 39.130 0.00 0.00 0.00 3.24
176 177 6.665992 ACTAACCTCATTTGTCACAGAGTA 57.334 37.500 0.00 0.00 0.00 2.59
177 178 6.692486 ACTAACCTCATTTGTCACAGAGTAG 58.308 40.000 0.00 0.00 0.00 2.57
178 179 3.931578 ACCTCATTTGTCACAGAGTAGC 58.068 45.455 0.00 0.00 0.00 3.58
179 180 3.265791 CCTCATTTGTCACAGAGTAGCC 58.734 50.000 0.00 0.00 0.00 3.93
180 181 2.926200 CTCATTTGTCACAGAGTAGCCG 59.074 50.000 0.00 0.00 0.00 5.52
181 182 2.299013 TCATTTGTCACAGAGTAGCCGT 59.701 45.455 0.00 0.00 0.00 5.68
182 183 2.433868 TTTGTCACAGAGTAGCCGTC 57.566 50.000 0.00 0.00 0.00 4.79
183 184 0.240145 TTGTCACAGAGTAGCCGTCG 59.760 55.000 0.00 0.00 0.00 5.12
184 185 1.136984 GTCACAGAGTAGCCGTCGG 59.863 63.158 6.99 6.99 0.00 4.79
185 186 1.002990 TCACAGAGTAGCCGTCGGA 60.003 57.895 17.49 0.00 0.00 4.55
186 187 1.136984 CACAGAGTAGCCGTCGGAC 59.863 63.158 17.49 5.06 0.00 4.79
187 188 2.396955 ACAGAGTAGCCGTCGGACG 61.397 63.158 22.88 22.88 42.11 4.79
188 189 2.104859 CAGAGTAGCCGTCGGACGA 61.105 63.158 30.33 9.24 46.05 4.20
189 190 2.105466 AGAGTAGCCGTCGGACGAC 61.105 63.158 30.33 20.34 46.05 4.34
200 201 2.413765 GGACGACGAGCTGGATCC 59.586 66.667 4.20 4.20 0.00 3.36
201 202 2.122167 GGACGACGAGCTGGATCCT 61.122 63.158 14.23 0.00 0.00 3.24
202 203 1.668101 GGACGACGAGCTGGATCCTT 61.668 60.000 14.23 0.00 0.00 3.36
203 204 0.248702 GACGACGAGCTGGATCCTTC 60.249 60.000 14.23 7.31 0.00 3.46
204 205 0.965866 ACGACGAGCTGGATCCTTCA 60.966 55.000 14.23 0.00 0.00 3.02
205 206 0.526524 CGACGAGCTGGATCCTTCAC 60.527 60.000 14.23 2.45 0.00 3.18
206 207 0.820871 GACGAGCTGGATCCTTCACT 59.179 55.000 14.23 4.70 0.00 3.41
207 208 0.820871 ACGAGCTGGATCCTTCACTC 59.179 55.000 14.23 12.56 0.00 3.51
208 209 0.103937 CGAGCTGGATCCTTCACTCC 59.896 60.000 14.23 0.00 0.00 3.85
209 210 1.198713 GAGCTGGATCCTTCACTCCA 58.801 55.000 14.23 0.00 39.23 3.86
210 211 1.556911 GAGCTGGATCCTTCACTCCAA 59.443 52.381 14.23 0.00 40.92 3.53
211 212 1.558756 AGCTGGATCCTTCACTCCAAG 59.441 52.381 14.23 0.00 40.92 3.61
212 213 1.556911 GCTGGATCCTTCACTCCAAGA 59.443 52.381 14.23 0.00 40.92 3.02
213 214 2.172293 GCTGGATCCTTCACTCCAAGAT 59.828 50.000 14.23 0.00 40.92 2.40
214 215 3.389329 GCTGGATCCTTCACTCCAAGATA 59.611 47.826 14.23 0.00 40.92 1.98
215 216 4.742138 GCTGGATCCTTCACTCCAAGATAC 60.742 50.000 14.23 0.00 40.92 2.24
216 217 3.711704 TGGATCCTTCACTCCAAGATACC 59.288 47.826 14.23 0.00 38.59 2.73
217 218 3.711704 GGATCCTTCACTCCAAGATACCA 59.288 47.826 3.84 0.00 0.00 3.25
218 219 4.349342 GGATCCTTCACTCCAAGATACCAT 59.651 45.833 3.84 0.00 0.00 3.55
219 220 5.544176 GGATCCTTCACTCCAAGATACCATA 59.456 44.000 3.84 0.00 0.00 2.74
220 221 6.295575 GGATCCTTCACTCCAAGATACCATAG 60.296 46.154 3.84 0.00 0.00 2.23
221 222 4.901849 TCCTTCACTCCAAGATACCATAGG 59.098 45.833 0.00 0.00 0.00 2.57
222 223 4.040952 CCTTCACTCCAAGATACCATAGGG 59.959 50.000 0.00 0.00 41.29 3.53
223 224 3.587498 TCACTCCAAGATACCATAGGGG 58.413 50.000 0.00 0.00 44.81 4.79
224 225 3.208922 TCACTCCAAGATACCATAGGGGA 59.791 47.826 0.00 0.00 41.15 4.81
225 226 3.325135 CACTCCAAGATACCATAGGGGAC 59.675 52.174 0.00 0.00 41.15 4.46
226 227 2.563179 CTCCAAGATACCATAGGGGACG 59.437 54.545 0.00 0.00 41.15 4.79
227 228 2.178325 TCCAAGATACCATAGGGGACGA 59.822 50.000 0.00 0.00 41.15 4.20
228 229 2.563179 CCAAGATACCATAGGGGACGAG 59.437 54.545 0.00 0.00 41.15 4.18
229 230 1.926108 AGATACCATAGGGGACGAGC 58.074 55.000 0.00 0.00 41.15 5.03
230 231 1.429687 AGATACCATAGGGGACGAGCT 59.570 52.381 0.00 0.00 41.15 4.09
231 232 1.546476 GATACCATAGGGGACGAGCTG 59.454 57.143 0.00 0.00 41.15 4.24
232 233 0.469331 TACCATAGGGGACGAGCTGG 60.469 60.000 0.00 0.00 41.15 4.85
233 234 1.457643 CCATAGGGGACGAGCTGGA 60.458 63.158 1.44 0.00 40.01 3.86
234 235 1.742768 CATAGGGGACGAGCTGGAC 59.257 63.158 1.44 0.00 0.00 4.02
235 236 1.828660 ATAGGGGACGAGCTGGACG 60.829 63.158 1.44 0.00 0.00 4.79
261 262 3.730761 GAGCTTGCTGGTGGCGTG 61.731 66.667 0.00 0.00 45.43 5.34
264 265 3.052082 CTTGCTGGTGGCGTGGAG 61.052 66.667 0.00 0.00 45.43 3.86
265 266 3.535629 CTTGCTGGTGGCGTGGAGA 62.536 63.158 0.00 0.00 45.43 3.71
266 267 3.113514 TTGCTGGTGGCGTGGAGAA 62.114 57.895 0.00 0.00 45.43 2.87
267 268 2.743928 GCTGGTGGCGTGGAGAAG 60.744 66.667 0.00 0.00 0.00 2.85
268 269 2.743928 CTGGTGGCGTGGAGAAGC 60.744 66.667 0.00 0.00 0.00 3.86
269 270 3.241530 TGGTGGCGTGGAGAAGCT 61.242 61.111 0.00 0.00 0.00 3.74
270 271 2.743928 GGTGGCGTGGAGAAGCTG 60.744 66.667 0.00 0.00 0.00 4.24
271 272 3.426568 GTGGCGTGGAGAAGCTGC 61.427 66.667 0.00 0.00 0.00 5.25
272 273 3.630013 TGGCGTGGAGAAGCTGCT 61.630 61.111 0.00 0.00 0.00 4.24
273 274 3.123620 GGCGTGGAGAAGCTGCTG 61.124 66.667 0.00 0.00 0.00 4.41
274 275 3.797546 GCGTGGAGAAGCTGCTGC 61.798 66.667 6.20 6.20 40.05 5.25
287 288 4.486503 GCTGCTGGAGCTGAGGGG 62.487 72.222 14.33 0.00 45.21 4.79
288 289 3.795041 CTGCTGGAGCTGAGGGGG 61.795 72.222 0.00 0.00 41.71 5.40
307 308 3.023116 CAGGGGGCAGATGGGGAA 61.023 66.667 0.00 0.00 0.00 3.97
308 309 3.023735 AGGGGGCAGATGGGGAAC 61.024 66.667 0.00 0.00 0.00 3.62
309 310 4.506255 GGGGGCAGATGGGGAACG 62.506 72.222 0.00 0.00 0.00 3.95
310 311 3.407967 GGGGCAGATGGGGAACGA 61.408 66.667 0.00 0.00 0.00 3.85
311 312 2.190578 GGGCAGATGGGGAACGAG 59.809 66.667 0.00 0.00 0.00 4.18
312 313 2.670148 GGGCAGATGGGGAACGAGT 61.670 63.158 0.00 0.00 0.00 4.18
313 314 1.450312 GGCAGATGGGGAACGAGTG 60.450 63.158 0.00 0.00 0.00 3.51
314 315 1.450312 GCAGATGGGGAACGAGTGG 60.450 63.158 0.00 0.00 0.00 4.00
315 316 1.899437 GCAGATGGGGAACGAGTGGA 61.899 60.000 0.00 0.00 0.00 4.02
316 317 0.176680 CAGATGGGGAACGAGTGGAG 59.823 60.000 0.00 0.00 0.00 3.86
317 318 1.153349 GATGGGGAACGAGTGGAGC 60.153 63.158 0.00 0.00 0.00 4.70
318 319 1.613630 ATGGGGAACGAGTGGAGCT 60.614 57.895 0.00 0.00 0.00 4.09
319 320 1.903877 ATGGGGAACGAGTGGAGCTG 61.904 60.000 0.00 0.00 0.00 4.24
320 321 2.266055 GGGAACGAGTGGAGCTGG 59.734 66.667 0.00 0.00 0.00 4.85
321 322 2.283529 GGGAACGAGTGGAGCTGGA 61.284 63.158 0.00 0.00 0.00 3.86
322 323 1.216710 GGAACGAGTGGAGCTGGAG 59.783 63.158 0.00 0.00 0.00 3.86
323 324 1.446966 GAACGAGTGGAGCTGGAGC 60.447 63.158 0.00 0.00 42.49 4.70
333 334 4.459089 GCTGGAGCTGGACCGGAC 62.459 72.222 9.46 0.00 38.21 4.79
334 335 4.135153 CTGGAGCTGGACCGGACG 62.135 72.222 9.46 0.00 35.98 4.79
335 336 4.988716 TGGAGCTGGACCGGACGT 62.989 66.667 9.46 0.00 0.00 4.34
336 337 4.436998 GGAGCTGGACCGGACGTG 62.437 72.222 9.46 0.00 0.00 4.49
337 338 3.371063 GAGCTGGACCGGACGTGA 61.371 66.667 9.46 0.00 0.00 4.35
338 339 2.915659 AGCTGGACCGGACGTGAA 60.916 61.111 9.46 0.00 0.00 3.18
339 340 2.737376 GCTGGACCGGACGTGAAC 60.737 66.667 9.46 0.00 0.00 3.18
340 341 3.048602 CTGGACCGGACGTGAACT 58.951 61.111 9.46 0.00 0.00 3.01
341 342 1.080705 CTGGACCGGACGTGAACTC 60.081 63.158 9.46 0.00 0.00 3.01
342 343 2.126580 GGACCGGACGTGAACTCG 60.127 66.667 9.46 0.00 0.00 4.18
343 344 2.620112 GGACCGGACGTGAACTCGA 61.620 63.158 9.46 0.00 34.70 4.04
344 345 1.505353 GACCGGACGTGAACTCGAT 59.495 57.895 9.46 0.00 34.70 3.59
345 346 0.109412 GACCGGACGTGAACTCGATT 60.109 55.000 9.46 0.00 34.70 3.34
346 347 0.109412 ACCGGACGTGAACTCGATTC 60.109 55.000 9.46 0.00 37.88 2.52
347 348 0.801067 CCGGACGTGAACTCGATTCC 60.801 60.000 0.00 0.76 36.36 3.01
348 349 1.132199 CGGACGTGAACTCGATTCCG 61.132 60.000 0.00 11.50 40.77 4.30
349 350 0.169672 GGACGTGAACTCGATTCCGA 59.830 55.000 0.00 0.00 43.35 4.55
350 351 1.257539 GACGTGAACTCGATTCCGAC 58.742 55.000 0.00 11.30 40.30 4.79
351 352 0.594602 ACGTGAACTCGATTCCGACA 59.405 50.000 16.74 0.00 40.30 4.35
352 353 1.201647 ACGTGAACTCGATTCCGACAT 59.798 47.619 16.74 0.00 40.30 3.06
353 354 2.421073 ACGTGAACTCGATTCCGACATA 59.579 45.455 16.74 0.00 40.30 2.29
354 355 3.036633 CGTGAACTCGATTCCGACATAG 58.963 50.000 0.00 0.00 40.30 2.23
355 356 3.487042 CGTGAACTCGATTCCGACATAGT 60.487 47.826 0.00 0.00 40.30 2.12
356 357 4.421948 GTGAACTCGATTCCGACATAGTT 58.578 43.478 0.00 0.00 40.30 2.24
357 358 5.575957 GTGAACTCGATTCCGACATAGTTA 58.424 41.667 0.00 0.00 40.30 2.24
358 359 6.032094 GTGAACTCGATTCCGACATAGTTAA 58.968 40.000 0.00 0.00 40.30 2.01
359 360 6.696148 GTGAACTCGATTCCGACATAGTTAAT 59.304 38.462 0.00 0.00 40.30 1.40
360 361 7.222224 GTGAACTCGATTCCGACATAGTTAATT 59.778 37.037 0.00 0.00 40.30 1.40
361 362 7.434307 TGAACTCGATTCCGACATAGTTAATTC 59.566 37.037 0.00 0.00 40.30 2.17
362 363 6.802608 ACTCGATTCCGACATAGTTAATTCA 58.197 36.000 0.00 0.00 40.30 2.57
363 364 6.918569 ACTCGATTCCGACATAGTTAATTCAG 59.081 38.462 0.00 0.00 40.30 3.02
364 365 6.213677 TCGATTCCGACATAGTTAATTCAGG 58.786 40.000 0.00 0.00 40.30 3.86
365 366 5.983720 CGATTCCGACATAGTTAATTCAGGT 59.016 40.000 0.00 0.00 38.22 4.00
366 367 6.074302 CGATTCCGACATAGTTAATTCAGGTG 60.074 42.308 0.00 0.00 38.22 4.00
367 368 5.670792 TCCGACATAGTTAATTCAGGTGT 57.329 39.130 0.00 0.00 0.00 4.16
368 369 5.416083 TCCGACATAGTTAATTCAGGTGTG 58.584 41.667 0.00 0.00 0.00 3.82
369 370 4.034048 CCGACATAGTTAATTCAGGTGTGC 59.966 45.833 0.00 0.00 0.00 4.57
370 371 4.870426 CGACATAGTTAATTCAGGTGTGCT 59.130 41.667 0.00 0.00 0.00 4.40
371 372 6.040247 CGACATAGTTAATTCAGGTGTGCTA 58.960 40.000 0.00 0.00 0.00 3.49
372 373 6.701841 CGACATAGTTAATTCAGGTGTGCTAT 59.298 38.462 0.00 0.00 0.00 2.97
373 374 7.865889 CGACATAGTTAATTCAGGTGTGCTATA 59.134 37.037 0.00 0.00 0.00 1.31
374 375 8.888579 ACATAGTTAATTCAGGTGTGCTATAC 57.111 34.615 0.00 0.00 0.00 1.47
375 376 8.705594 ACATAGTTAATTCAGGTGTGCTATACT 58.294 33.333 0.00 0.00 0.00 2.12
376 377 8.982685 CATAGTTAATTCAGGTGTGCTATACTG 58.017 37.037 0.00 0.00 0.00 2.74
377 378 5.817816 AGTTAATTCAGGTGTGCTATACTGC 59.182 40.000 0.00 0.00 0.00 4.40
378 379 3.912496 ATTCAGGTGTGCTATACTGCA 57.088 42.857 0.00 0.00 41.05 4.41
379 380 2.967599 TCAGGTGTGCTATACTGCAG 57.032 50.000 13.48 13.48 44.20 4.41
380 381 1.482182 TCAGGTGTGCTATACTGCAGG 59.518 52.381 19.93 0.31 44.20 4.85
381 382 1.208052 CAGGTGTGCTATACTGCAGGT 59.792 52.381 19.93 8.94 44.20 4.00
382 383 1.909302 AGGTGTGCTATACTGCAGGTT 59.091 47.619 19.93 7.31 44.20 3.50
383 384 2.009774 GGTGTGCTATACTGCAGGTTG 58.990 52.381 19.93 8.45 44.20 3.77
384 385 2.354704 GGTGTGCTATACTGCAGGTTGA 60.355 50.000 19.93 0.02 44.20 3.18
385 386 3.535561 GTGTGCTATACTGCAGGTTGAT 58.464 45.455 19.93 8.18 44.20 2.57
386 387 4.442893 GGTGTGCTATACTGCAGGTTGATA 60.443 45.833 19.93 8.89 44.20 2.15
387 388 5.116180 GTGTGCTATACTGCAGGTTGATAA 58.884 41.667 19.93 0.00 44.20 1.75
388 389 5.584649 GTGTGCTATACTGCAGGTTGATAAA 59.415 40.000 19.93 0.00 44.20 1.40
389 390 6.093495 GTGTGCTATACTGCAGGTTGATAAAA 59.907 38.462 19.93 0.00 44.20 1.52
390 391 6.316140 TGTGCTATACTGCAGGTTGATAAAAG 59.684 38.462 19.93 4.50 44.20 2.27
391 392 6.538742 GTGCTATACTGCAGGTTGATAAAAGA 59.461 38.462 19.93 0.00 44.20 2.52
392 393 7.065803 GTGCTATACTGCAGGTTGATAAAAGAA 59.934 37.037 19.93 0.00 44.20 2.52
393 394 7.609918 TGCTATACTGCAGGTTGATAAAAGAAA 59.390 33.333 19.93 0.00 38.12 2.52
394 395 8.458843 GCTATACTGCAGGTTGATAAAAGAAAA 58.541 33.333 19.93 0.00 0.00 2.29
397 398 6.458210 ACTGCAGGTTGATAAAAGAAAATGG 58.542 36.000 19.93 0.00 0.00 3.16
398 399 5.237048 TGCAGGTTGATAAAAGAAAATGGC 58.763 37.500 0.00 0.00 0.00 4.40
399 400 5.221601 TGCAGGTTGATAAAAGAAAATGGCA 60.222 36.000 0.00 0.00 0.00 4.92
400 401 5.349543 GCAGGTTGATAAAAGAAAATGGCAG 59.650 40.000 0.00 0.00 0.00 4.85
401 402 6.458210 CAGGTTGATAAAAGAAAATGGCAGT 58.542 36.000 0.00 0.00 0.00 4.40
402 403 6.930722 CAGGTTGATAAAAGAAAATGGCAGTT 59.069 34.615 0.00 0.00 0.00 3.16
403 404 7.442062 CAGGTTGATAAAAGAAAATGGCAGTTT 59.558 33.333 13.30 13.30 0.00 2.66
404 405 7.992608 AGGTTGATAAAAGAAAATGGCAGTTTT 59.007 29.630 14.62 10.30 34.19 2.43
405 406 8.620416 GGTTGATAAAAGAAAATGGCAGTTTTT 58.380 29.630 14.62 5.97 31.80 1.94
427 428 3.389211 GCAAAAGTGCGTGCGCTG 61.389 61.111 17.49 8.09 41.93 5.18
428 429 2.327592 CAAAAGTGCGTGCGCTGA 59.672 55.556 17.49 0.00 42.51 4.26
429 430 2.005537 CAAAAGTGCGTGCGCTGAC 61.006 57.895 17.49 8.37 42.51 3.51
430 431 3.181169 AAAAGTGCGTGCGCTGACC 62.181 57.895 17.49 3.54 42.51 4.02
440 441 3.374402 CGCTGACCGGTCCAGTCT 61.374 66.667 31.19 0.00 35.21 3.24
441 442 2.932234 CGCTGACCGGTCCAGTCTT 61.932 63.158 31.19 0.00 35.21 3.01
442 443 1.079750 GCTGACCGGTCCAGTCTTC 60.080 63.158 31.19 11.67 35.21 2.87
443 444 1.213013 CTGACCGGTCCAGTCTTCG 59.787 63.158 31.19 6.06 35.21 3.79
444 445 2.214181 CTGACCGGTCCAGTCTTCGG 62.214 65.000 31.19 6.09 46.95 4.30
445 446 1.975407 GACCGGTCCAGTCTTCGGA 60.975 63.158 24.75 0.00 44.69 4.55
446 447 1.935327 GACCGGTCCAGTCTTCGGAG 61.935 65.000 24.75 0.00 44.69 4.63
447 448 1.677966 CCGGTCCAGTCTTCGGAGA 60.678 63.158 0.00 0.00 44.69 3.71
448 449 1.038130 CCGGTCCAGTCTTCGGAGAT 61.038 60.000 0.00 0.00 44.69 2.75
449 450 0.101399 CGGTCCAGTCTTCGGAGATG 59.899 60.000 0.00 0.00 35.04 2.90
450 451 0.461961 GGTCCAGTCTTCGGAGATGG 59.538 60.000 13.27 13.27 35.04 3.51
451 452 1.187087 GTCCAGTCTTCGGAGATGGT 58.813 55.000 16.93 0.00 35.04 3.55
452 453 1.134965 GTCCAGTCTTCGGAGATGGTG 60.135 57.143 16.93 7.57 35.04 4.17
453 454 0.898320 CCAGTCTTCGGAGATGGTGT 59.102 55.000 0.00 0.00 35.04 4.16
454 455 2.100197 CCAGTCTTCGGAGATGGTGTA 58.900 52.381 0.00 0.00 35.04 2.90
455 456 2.159226 CCAGTCTTCGGAGATGGTGTAC 60.159 54.545 0.00 0.00 35.04 2.90
456 457 2.492088 CAGTCTTCGGAGATGGTGTACA 59.508 50.000 0.00 0.00 35.04 2.90
457 458 2.492484 AGTCTTCGGAGATGGTGTACAC 59.508 50.000 18.01 18.01 35.04 2.90
458 459 2.230508 GTCTTCGGAGATGGTGTACACA 59.769 50.000 26.51 13.55 35.04 3.72
459 460 3.096852 TCTTCGGAGATGGTGTACACAT 58.903 45.455 26.51 17.38 35.04 3.21
460 461 2.959507 TCGGAGATGGTGTACACATG 57.040 50.000 26.51 8.33 0.00 3.21
461 462 2.452505 TCGGAGATGGTGTACACATGA 58.547 47.619 26.51 10.82 0.00 3.07
462 463 3.031013 TCGGAGATGGTGTACACATGAT 58.969 45.455 26.51 14.94 0.00 2.45
463 464 3.450817 TCGGAGATGGTGTACACATGATT 59.549 43.478 26.51 8.46 0.00 2.57
464 465 3.557185 CGGAGATGGTGTACACATGATTG 59.443 47.826 26.51 7.49 0.00 2.67
465 466 4.680440 CGGAGATGGTGTACACATGATTGA 60.680 45.833 26.51 2.53 0.00 2.57
466 467 4.572389 GGAGATGGTGTACACATGATTGAC 59.428 45.833 26.51 7.89 0.00 3.18
467 468 4.517285 AGATGGTGTACACATGATTGACC 58.483 43.478 26.51 7.34 0.00 4.02
468 469 2.694213 TGGTGTACACATGATTGACCG 58.306 47.619 26.51 0.00 0.00 4.79
469 470 2.006888 GGTGTACACATGATTGACCGG 58.993 52.381 26.51 0.00 0.00 5.28
470 471 2.614481 GGTGTACACATGATTGACCGGT 60.614 50.000 26.51 6.92 0.00 5.28
471 472 2.671396 GTGTACACATGATTGACCGGTC 59.329 50.000 28.17 28.17 0.00 4.79
472 473 2.277084 GTACACATGATTGACCGGTCC 58.723 52.381 31.19 16.73 0.00 4.46
473 474 0.690192 ACACATGATTGACCGGTCCA 59.310 50.000 31.19 21.93 0.00 4.02
474 475 1.086696 CACATGATTGACCGGTCCAC 58.913 55.000 31.19 21.11 0.00 4.02
475 476 0.035439 ACATGATTGACCGGTCCACC 60.035 55.000 31.19 13.23 0.00 4.61
476 477 0.253044 CATGATTGACCGGTCCACCT 59.747 55.000 31.19 13.19 0.00 4.00
477 478 0.253044 ATGATTGACCGGTCCACCTG 59.747 55.000 31.19 0.00 0.00 4.00
478 479 1.078426 GATTGACCGGTCCACCTGG 60.078 63.158 31.19 0.00 36.31 4.45
479 480 3.268103 ATTGACCGGTCCACCTGGC 62.268 63.158 31.19 5.34 34.50 4.85
480 481 4.954118 TGACCGGTCCACCTGGCT 62.954 66.667 31.19 0.00 34.50 4.75
481 482 4.394712 GACCGGTCCACCTGGCTG 62.395 72.222 24.75 0.00 34.50 4.85
485 486 4.284550 GGTCCACCTGGCTGCCAA 62.285 66.667 23.51 4.09 30.80 4.52
486 487 2.036256 GTCCACCTGGCTGCCAAT 59.964 61.111 23.51 11.13 30.80 3.16
487 488 1.607467 GTCCACCTGGCTGCCAATT 60.607 57.895 23.51 9.42 30.80 2.32
488 489 1.607178 TCCACCTGGCTGCCAATTG 60.607 57.895 23.51 20.35 30.80 2.32
489 490 2.652095 CCACCTGGCTGCCAATTGG 61.652 63.158 25.73 25.73 31.72 3.16
499 500 3.985877 CCAATTGGCGAGCTGTGA 58.014 55.556 12.53 0.00 0.00 3.58
500 501 2.485677 CCAATTGGCGAGCTGTGAT 58.514 52.632 12.53 0.00 0.00 3.06
501 502 0.813184 CCAATTGGCGAGCTGTGATT 59.187 50.000 12.53 0.00 0.00 2.57
502 503 1.468565 CCAATTGGCGAGCTGTGATTG 60.469 52.381 12.53 0.00 0.00 2.67
503 504 0.813184 AATTGGCGAGCTGTGATTGG 59.187 50.000 0.00 0.00 0.00 3.16
504 505 1.660560 ATTGGCGAGCTGTGATTGGC 61.661 55.000 0.00 0.00 0.00 4.52
505 506 3.512516 GGCGAGCTGTGATTGGCC 61.513 66.667 0.00 0.00 0.00 5.36
506 507 2.437359 GCGAGCTGTGATTGGCCT 60.437 61.111 3.32 0.00 0.00 5.19
507 508 2.758089 GCGAGCTGTGATTGGCCTG 61.758 63.158 3.32 0.00 0.00 4.85
508 509 1.078918 CGAGCTGTGATTGGCCTGA 60.079 57.895 3.32 0.00 0.00 3.86
509 510 1.088340 CGAGCTGTGATTGGCCTGAG 61.088 60.000 3.32 0.00 0.00 3.35
510 511 0.251354 GAGCTGTGATTGGCCTGAGA 59.749 55.000 3.32 0.00 0.00 3.27
511 512 0.035630 AGCTGTGATTGGCCTGAGAC 60.036 55.000 3.32 0.00 0.00 3.36
512 513 0.035630 GCTGTGATTGGCCTGAGACT 60.036 55.000 3.32 0.00 0.00 3.24
513 514 1.208052 GCTGTGATTGGCCTGAGACTA 59.792 52.381 3.32 0.00 0.00 2.59
514 515 2.355108 GCTGTGATTGGCCTGAGACTAA 60.355 50.000 3.32 0.00 0.00 2.24
515 516 3.869912 GCTGTGATTGGCCTGAGACTAAA 60.870 47.826 3.32 0.00 0.00 1.85
516 517 4.521146 CTGTGATTGGCCTGAGACTAAAT 58.479 43.478 3.32 0.00 0.00 1.40
517 518 4.517285 TGTGATTGGCCTGAGACTAAATC 58.483 43.478 3.32 2.55 0.00 2.17
518 519 4.019411 TGTGATTGGCCTGAGACTAAATCA 60.019 41.667 3.32 5.49 33.02 2.57
519 520 5.128919 GTGATTGGCCTGAGACTAAATCAT 58.871 41.667 12.42 0.00 36.67 2.45
520 521 5.238214 GTGATTGGCCTGAGACTAAATCATC 59.762 44.000 12.42 5.19 36.67 2.92
521 522 4.842531 TTGGCCTGAGACTAAATCATCA 57.157 40.909 3.32 0.00 0.00 3.07
522 523 4.142609 TGGCCTGAGACTAAATCATCAC 57.857 45.455 3.32 0.00 0.00 3.06
523 524 3.519107 TGGCCTGAGACTAAATCATCACA 59.481 43.478 3.32 0.00 0.00 3.58
524 525 4.164796 TGGCCTGAGACTAAATCATCACAT 59.835 41.667 3.32 0.00 0.00 3.21
525 526 4.514441 GGCCTGAGACTAAATCATCACATG 59.486 45.833 0.00 0.00 0.00 3.21
526 527 5.363101 GCCTGAGACTAAATCATCACATGA 58.637 41.667 0.00 0.00 44.55 3.07
527 528 5.466058 GCCTGAGACTAAATCATCACATGAG 59.534 44.000 0.00 0.00 43.53 2.90
528 529 5.990386 CCTGAGACTAAATCATCACATGAGG 59.010 44.000 0.00 0.00 43.53 3.86
529 530 6.407865 CCTGAGACTAAATCATCACATGAGGT 60.408 42.308 0.00 0.00 43.53 3.85
540 541 3.837213 CACATGAGGTGCAAGTTAAGG 57.163 47.619 0.00 0.00 41.36 2.69
541 542 3.149196 CACATGAGGTGCAAGTTAAGGT 58.851 45.455 0.00 0.00 41.36 3.50
542 543 4.323417 CACATGAGGTGCAAGTTAAGGTA 58.677 43.478 0.00 0.00 41.36 3.08
543 544 4.943705 CACATGAGGTGCAAGTTAAGGTAT 59.056 41.667 0.00 0.00 41.36 2.73
544 545 4.943705 ACATGAGGTGCAAGTTAAGGTATG 59.056 41.667 0.00 0.00 0.00 2.39
545 546 3.950397 TGAGGTGCAAGTTAAGGTATGG 58.050 45.455 0.00 0.00 0.00 2.74
546 547 3.329520 TGAGGTGCAAGTTAAGGTATGGT 59.670 43.478 0.00 0.00 0.00 3.55
547 548 3.939592 GAGGTGCAAGTTAAGGTATGGTC 59.060 47.826 0.00 0.00 0.00 4.02
548 549 3.587506 AGGTGCAAGTTAAGGTATGGTCT 59.412 43.478 0.00 0.00 0.00 3.85
549 550 3.689649 GGTGCAAGTTAAGGTATGGTCTG 59.310 47.826 0.00 0.00 0.00 3.51
550 551 3.127030 GTGCAAGTTAAGGTATGGTCTGC 59.873 47.826 0.00 0.00 0.00 4.26
551 552 3.244735 TGCAAGTTAAGGTATGGTCTGCA 60.245 43.478 0.00 0.00 0.00 4.41
552 553 3.756434 GCAAGTTAAGGTATGGTCTGCAA 59.244 43.478 0.00 0.00 0.00 4.08
553 554 4.142600 GCAAGTTAAGGTATGGTCTGCAAG 60.143 45.833 0.00 0.00 0.00 4.01
554 555 4.910458 AGTTAAGGTATGGTCTGCAAGT 57.090 40.909 0.00 0.00 33.76 3.16
555 556 5.242795 AGTTAAGGTATGGTCTGCAAGTT 57.757 39.130 0.00 0.00 33.76 2.66
556 557 6.368779 AGTTAAGGTATGGTCTGCAAGTTA 57.631 37.500 0.00 0.00 33.76 2.24
557 558 6.407202 AGTTAAGGTATGGTCTGCAAGTTAG 58.593 40.000 0.00 0.00 33.76 2.34
558 559 3.914426 AGGTATGGTCTGCAAGTTAGG 57.086 47.619 0.00 0.00 33.76 2.69
559 560 2.505819 AGGTATGGTCTGCAAGTTAGGG 59.494 50.000 0.00 0.00 33.76 3.53
560 561 2.238898 GGTATGGTCTGCAAGTTAGGGT 59.761 50.000 0.00 0.00 33.76 4.34
561 562 3.453353 GGTATGGTCTGCAAGTTAGGGTA 59.547 47.826 0.00 0.00 33.76 3.69
562 563 3.629142 ATGGTCTGCAAGTTAGGGTAC 57.371 47.619 0.00 0.00 33.76 3.34
563 564 2.616524 TGGTCTGCAAGTTAGGGTACT 58.383 47.619 0.00 0.00 33.76 2.73
564 565 3.781808 TGGTCTGCAAGTTAGGGTACTA 58.218 45.455 0.00 0.00 33.76 1.82
565 566 4.359105 TGGTCTGCAAGTTAGGGTACTAT 58.641 43.478 0.00 0.00 33.76 2.12
566 567 4.781087 TGGTCTGCAAGTTAGGGTACTATT 59.219 41.667 0.00 0.00 33.76 1.73
567 568 5.959594 TGGTCTGCAAGTTAGGGTACTATTA 59.040 40.000 0.00 0.00 33.76 0.98
568 569 6.127253 TGGTCTGCAAGTTAGGGTACTATTAC 60.127 42.308 0.00 0.00 33.76 1.89
569 570 5.975939 GTCTGCAAGTTAGGGTACTATTACG 59.024 44.000 0.00 0.00 33.76 3.18
570 571 5.653769 TCTGCAAGTTAGGGTACTATTACGT 59.346 40.000 0.00 0.00 33.76 3.57
571 572 5.894807 TGCAAGTTAGGGTACTATTACGTC 58.105 41.667 0.00 0.00 0.00 4.34
675 677 2.890474 GTGACGGCCGCCATAGTG 60.890 66.667 28.58 0.00 0.00 2.74
686 688 6.044046 CGGCCGCCATAGTGTTATTATTATA 58.956 40.000 14.67 0.00 0.00 0.98
687 689 6.704493 CGGCCGCCATAGTGTTATTATTATAT 59.296 38.462 14.67 0.00 0.00 0.86
688 690 7.225931 CGGCCGCCATAGTGTTATTATTATATT 59.774 37.037 14.67 0.00 0.00 1.28
689 691 9.550406 GGCCGCCATAGTGTTATTATTATATTA 57.450 33.333 3.91 0.00 0.00 0.98
1144 1203 2.047274 CCCAACATCACGGCGTCT 60.047 61.111 10.85 0.00 0.00 4.18
1948 2093 6.705863 TGCGATGAGAGCATGAGTATATAT 57.294 37.500 0.00 0.00 40.01 0.86
1949 2094 7.807977 TGCGATGAGAGCATGAGTATATATA 57.192 36.000 0.00 0.00 40.01 0.86
1999 2144 7.448748 AAGAGCGTGGACAACTAATAATTTT 57.551 32.000 0.00 0.00 0.00 1.82
2078 2223 4.718858 TGGTACGCACGCATTAATTATC 57.281 40.909 0.00 0.00 0.00 1.75
2131 2286 0.879765 GCTCGAGCTAGCCCGTTATA 59.120 55.000 29.88 0.00 36.45 0.98
2136 2299 3.057033 TCGAGCTAGCCCGTTATATTTCC 60.057 47.826 18.57 0.00 0.00 3.13
2137 2300 3.056749 CGAGCTAGCCCGTTATATTTCCT 60.057 47.826 10.89 0.00 0.00 3.36
2138 2301 4.496360 GAGCTAGCCCGTTATATTTCCTC 58.504 47.826 12.13 0.00 0.00 3.71
2139 2302 4.161102 AGCTAGCCCGTTATATTTCCTCT 58.839 43.478 12.13 0.00 0.00 3.69
2140 2303 4.593634 AGCTAGCCCGTTATATTTCCTCTT 59.406 41.667 12.13 0.00 0.00 2.85
2141 2304 4.930405 GCTAGCCCGTTATATTTCCTCTTC 59.070 45.833 2.29 0.00 0.00 2.87
2142 2305 5.279556 GCTAGCCCGTTATATTTCCTCTTCT 60.280 44.000 2.29 0.00 0.00 2.85
2143 2306 5.216614 AGCCCGTTATATTTCCTCTTCTC 57.783 43.478 0.00 0.00 0.00 2.87
2250 2432 2.159382 GTCTCCATTTTCGCCAAAGGA 58.841 47.619 0.00 0.00 0.00 3.36
2314 2500 7.036996 TCTGCAACAATGAAATGTTCTACAA 57.963 32.000 0.00 0.00 41.44 2.41
2414 2632 4.399004 TGTAGCTGCAAAACAAACCATT 57.601 36.364 0.43 0.00 0.00 3.16
2424 2642 1.799933 ACAAACCATTGGGAAGGCAA 58.200 45.000 7.78 0.00 41.01 4.52
2425 2643 2.122768 ACAAACCATTGGGAAGGCAAA 58.877 42.857 7.78 0.00 41.01 3.68
2428 2646 2.101640 ACCATTGGGAAGGCAAAACT 57.898 45.000 7.78 0.00 38.05 2.66
2445 2663 4.625607 AAACTCGGAGTCCAAATTCTCT 57.374 40.909 11.71 0.00 0.00 3.10
2478 2696 4.604976 CTTCCAAGAAGAAAACAGTGCAG 58.395 43.478 0.00 0.00 0.00 4.41
2481 2699 4.704540 TCCAAGAAGAAAACAGTGCAGAAA 59.295 37.500 0.00 0.00 0.00 2.52
2530 2750 2.430694 AGGTTTTCACCCTGAACAAAGC 59.569 45.455 0.00 0.00 45.63 3.51
2793 3121 3.379445 CGCTACACCACCGAGGGT 61.379 66.667 0.00 0.00 43.89 4.34
2871 3199 2.582978 GAGACCAAGGGCGGGTAC 59.417 66.667 0.00 0.00 39.19 3.34
2896 3224 5.351465 TGAAGATGATGATGATGATGATGCG 59.649 40.000 0.00 0.00 0.00 4.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.532521 ACAATGTTGTAGGCTCCTACTTCT 59.467 41.667 22.46 6.47 46.53 2.85
1 2 4.631813 CACAATGTTGTAGGCTCCTACTTC 59.368 45.833 22.46 16.28 46.53 3.01
2 3 4.041691 ACACAATGTTGTAGGCTCCTACTT 59.958 41.667 22.46 9.29 46.53 2.24
3 4 3.583086 ACACAATGTTGTAGGCTCCTACT 59.417 43.478 22.46 4.17 46.53 2.57
4 5 3.939066 ACACAATGTTGTAGGCTCCTAC 58.061 45.455 17.05 17.05 46.56 3.18
5 6 4.528987 TGTACACAATGTTGTAGGCTCCTA 59.471 41.667 0.00 0.00 39.91 2.94
6 7 3.326588 TGTACACAATGTTGTAGGCTCCT 59.673 43.478 0.00 0.00 39.91 3.69
7 8 3.670625 TGTACACAATGTTGTAGGCTCC 58.329 45.455 0.00 0.00 39.91 4.70
8 9 4.513692 TGTTGTACACAATGTTGTAGGCTC 59.486 41.667 0.00 0.00 39.91 4.70
9 10 4.456535 TGTTGTACACAATGTTGTAGGCT 58.543 39.130 0.00 0.00 39.91 4.58
10 11 4.822036 TGTTGTACACAATGTTGTAGGC 57.178 40.909 0.00 0.00 39.91 3.93
11 12 8.134895 AGAATTTGTTGTACACAATGTTGTAGG 58.865 33.333 0.00 0.00 45.17 3.18
12 13 9.169468 GAGAATTTGTTGTACACAATGTTGTAG 57.831 33.333 0.00 0.00 45.17 2.74
13 14 7.853437 CGAGAATTTGTTGTACACAATGTTGTA 59.147 33.333 0.00 0.00 45.17 2.41
14 15 6.690957 CGAGAATTTGTTGTACACAATGTTGT 59.309 34.615 0.00 1.66 45.17 3.32
15 16 6.690957 ACGAGAATTTGTTGTACACAATGTTG 59.309 34.615 0.00 0.00 45.17 3.33
16 17 6.791303 ACGAGAATTTGTTGTACACAATGTT 58.209 32.000 0.00 2.75 45.17 2.71
17 18 6.037720 TGACGAGAATTTGTTGTACACAATGT 59.962 34.615 0.00 0.00 45.17 2.71
18 19 6.426327 TGACGAGAATTTGTTGTACACAATG 58.574 36.000 0.00 0.00 45.17 2.82
19 20 6.612247 TGACGAGAATTTGTTGTACACAAT 57.388 33.333 0.00 0.00 45.17 2.71
20 21 5.503357 GCTGACGAGAATTTGTTGTACACAA 60.503 40.000 0.00 0.69 44.11 3.33
21 22 4.025229 GCTGACGAGAATTTGTTGTACACA 60.025 41.667 0.00 0.00 0.00 3.72
22 23 4.025229 TGCTGACGAGAATTTGTTGTACAC 60.025 41.667 0.00 0.00 0.00 2.90
23 24 4.123506 TGCTGACGAGAATTTGTTGTACA 58.876 39.130 0.00 0.00 0.00 2.90
24 25 4.725556 TGCTGACGAGAATTTGTTGTAC 57.274 40.909 0.00 0.00 0.00 2.90
25 26 5.525745 TCTTTGCTGACGAGAATTTGTTGTA 59.474 36.000 0.00 0.00 0.00 2.41
26 27 4.335315 TCTTTGCTGACGAGAATTTGTTGT 59.665 37.500 0.00 0.00 0.00 3.32
27 28 4.847633 TCTTTGCTGACGAGAATTTGTTG 58.152 39.130 0.00 0.00 0.00 3.33
28 29 4.023707 CCTCTTTGCTGACGAGAATTTGTT 60.024 41.667 0.00 0.00 0.00 2.83
29 30 3.499918 CCTCTTTGCTGACGAGAATTTGT 59.500 43.478 0.00 0.00 0.00 2.83
30 31 3.669023 GCCTCTTTGCTGACGAGAATTTG 60.669 47.826 0.00 0.00 0.00 2.32
31 32 2.485814 GCCTCTTTGCTGACGAGAATTT 59.514 45.455 0.00 0.00 0.00 1.82
32 33 2.079925 GCCTCTTTGCTGACGAGAATT 58.920 47.619 0.00 0.00 0.00 2.17
33 34 1.002430 TGCCTCTTTGCTGACGAGAAT 59.998 47.619 0.00 0.00 0.00 2.40
34 35 0.392706 TGCCTCTTTGCTGACGAGAA 59.607 50.000 0.00 0.00 0.00 2.87
35 36 0.037882 CTGCCTCTTTGCTGACGAGA 60.038 55.000 0.00 0.00 32.50 4.04
36 37 0.037882 TCTGCCTCTTTGCTGACGAG 60.038 55.000 0.00 0.00 34.75 4.18
37 38 0.319900 GTCTGCCTCTTTGCTGACGA 60.320 55.000 7.18 0.00 45.81 4.20
38 39 2.157421 GTCTGCCTCTTTGCTGACG 58.843 57.895 7.18 0.00 45.81 4.35
40 41 1.673923 CGATGTCTGCCTCTTTGCTGA 60.674 52.381 0.00 0.00 36.94 4.26
41 42 0.725686 CGATGTCTGCCTCTTTGCTG 59.274 55.000 0.00 0.00 0.00 4.41
42 43 0.610174 TCGATGTCTGCCTCTTTGCT 59.390 50.000 0.00 0.00 0.00 3.91
43 44 1.442769 TTCGATGTCTGCCTCTTTGC 58.557 50.000 0.00 0.00 0.00 3.68
44 45 3.557595 GGTATTCGATGTCTGCCTCTTTG 59.442 47.826 0.00 0.00 0.00 2.77
45 46 3.452627 AGGTATTCGATGTCTGCCTCTTT 59.547 43.478 0.00 0.00 0.00 2.52
46 47 3.034635 AGGTATTCGATGTCTGCCTCTT 58.965 45.455 0.00 0.00 0.00 2.85
47 48 2.672098 AGGTATTCGATGTCTGCCTCT 58.328 47.619 0.00 0.00 0.00 3.69
48 49 4.038162 AGTTAGGTATTCGATGTCTGCCTC 59.962 45.833 0.00 0.00 0.00 4.70
49 50 3.961408 AGTTAGGTATTCGATGTCTGCCT 59.039 43.478 0.00 0.00 0.00 4.75
50 51 4.323553 AGTTAGGTATTCGATGTCTGCC 57.676 45.455 0.00 0.00 0.00 4.85
51 52 5.915758 CAGTAGTTAGGTATTCGATGTCTGC 59.084 44.000 0.00 0.00 0.00 4.26
52 53 5.915758 GCAGTAGTTAGGTATTCGATGTCTG 59.084 44.000 0.00 0.00 0.00 3.51
53 54 5.593095 TGCAGTAGTTAGGTATTCGATGTCT 59.407 40.000 0.00 0.00 0.00 3.41
54 55 5.828747 TGCAGTAGTTAGGTATTCGATGTC 58.171 41.667 0.00 0.00 0.00 3.06
55 56 5.847111 TGCAGTAGTTAGGTATTCGATGT 57.153 39.130 0.00 0.00 0.00 3.06
56 57 6.447162 TGATGCAGTAGTTAGGTATTCGATG 58.553 40.000 0.00 0.00 0.00 3.84
57 58 6.650427 TGATGCAGTAGTTAGGTATTCGAT 57.350 37.500 0.00 0.00 0.00 3.59
58 59 6.490381 AGATGATGCAGTAGTTAGGTATTCGA 59.510 38.462 0.00 0.00 0.00 3.71
59 60 6.682746 AGATGATGCAGTAGTTAGGTATTCG 58.317 40.000 0.00 0.00 0.00 3.34
60 61 9.579768 CATAGATGATGCAGTAGTTAGGTATTC 57.420 37.037 0.00 0.00 0.00 1.75
76 77 8.350722 AGTAGCAAAATTTCAGCATAGATGATG 58.649 33.333 15.35 1.26 44.99 3.07
77 78 8.461249 AGTAGCAAAATTTCAGCATAGATGAT 57.539 30.769 15.35 0.00 0.00 2.45
78 79 7.553760 TGAGTAGCAAAATTTCAGCATAGATGA 59.446 33.333 15.35 0.00 0.00 2.92
79 80 7.700505 TGAGTAGCAAAATTTCAGCATAGATG 58.299 34.615 15.35 0.00 0.00 2.90
80 81 7.870509 TGAGTAGCAAAATTTCAGCATAGAT 57.129 32.000 15.35 0.72 0.00 1.98
81 82 7.607607 TCTTGAGTAGCAAAATTTCAGCATAGA 59.392 33.333 15.35 7.36 35.74 1.98
82 83 7.755591 TCTTGAGTAGCAAAATTTCAGCATAG 58.244 34.615 15.35 5.76 35.74 2.23
83 84 7.686438 TCTTGAGTAGCAAAATTTCAGCATA 57.314 32.000 15.35 5.14 35.74 3.14
84 85 6.579666 TCTTGAGTAGCAAAATTTCAGCAT 57.420 33.333 15.35 3.92 35.74 3.79
85 86 6.183360 TGTTCTTGAGTAGCAAAATTTCAGCA 60.183 34.615 15.35 2.45 35.74 4.41
86 87 6.142958 GTGTTCTTGAGTAGCAAAATTTCAGC 59.857 38.462 7.32 7.32 35.74 4.26
87 88 6.638468 GGTGTTCTTGAGTAGCAAAATTTCAG 59.362 38.462 0.00 0.00 35.74 3.02
88 89 6.096141 TGGTGTTCTTGAGTAGCAAAATTTCA 59.904 34.615 0.00 0.00 35.74 2.69
89 90 6.503524 TGGTGTTCTTGAGTAGCAAAATTTC 58.496 36.000 0.00 0.00 35.74 2.17
90 91 6.463995 TGGTGTTCTTGAGTAGCAAAATTT 57.536 33.333 0.00 0.00 35.74 1.82
91 92 6.655078 ATGGTGTTCTTGAGTAGCAAAATT 57.345 33.333 0.00 0.00 35.74 1.82
92 93 6.655078 AATGGTGTTCTTGAGTAGCAAAAT 57.345 33.333 0.00 0.00 35.74 1.82
93 94 6.463995 AAATGGTGTTCTTGAGTAGCAAAA 57.536 33.333 0.00 0.00 35.74 2.44
94 95 6.463995 AAAATGGTGTTCTTGAGTAGCAAA 57.536 33.333 0.00 0.00 35.74 3.68
95 96 6.272318 CAAAAATGGTGTTCTTGAGTAGCAA 58.728 36.000 0.00 0.00 34.73 3.91
96 97 5.735922 GCAAAAATGGTGTTCTTGAGTAGCA 60.736 40.000 0.00 0.00 0.00 3.49
97 98 4.681483 GCAAAAATGGTGTTCTTGAGTAGC 59.319 41.667 0.00 0.00 0.00 3.58
98 99 6.076981 AGCAAAAATGGTGTTCTTGAGTAG 57.923 37.500 0.00 0.00 0.00 2.57
99 100 7.575414 TTAGCAAAAATGGTGTTCTTGAGTA 57.425 32.000 0.00 0.00 0.00 2.59
100 101 6.463995 TTAGCAAAAATGGTGTTCTTGAGT 57.536 33.333 0.00 0.00 0.00 3.41
101 102 7.116805 GGATTTAGCAAAAATGGTGTTCTTGAG 59.883 37.037 2.14 0.00 0.00 3.02
102 103 6.928492 GGATTTAGCAAAAATGGTGTTCTTGA 59.072 34.615 2.14 0.00 0.00 3.02
103 104 6.147656 GGGATTTAGCAAAAATGGTGTTCTTG 59.852 38.462 2.14 0.00 0.00 3.02
104 105 6.043127 AGGGATTTAGCAAAAATGGTGTTCTT 59.957 34.615 2.14 0.00 0.00 2.52
105 106 5.543790 AGGGATTTAGCAAAAATGGTGTTCT 59.456 36.000 2.14 0.00 0.00 3.01
106 107 5.793817 AGGGATTTAGCAAAAATGGTGTTC 58.206 37.500 2.14 0.00 0.00 3.18
107 108 5.823861 AGGGATTTAGCAAAAATGGTGTT 57.176 34.783 2.14 0.00 0.00 3.32
108 109 6.496911 AGTTAGGGATTTAGCAAAAATGGTGT 59.503 34.615 2.14 0.00 0.00 4.16
109 110 6.813152 CAGTTAGGGATTTAGCAAAAATGGTG 59.187 38.462 2.14 0.00 0.00 4.17
110 111 6.574269 GCAGTTAGGGATTTAGCAAAAATGGT 60.574 38.462 2.14 0.00 0.00 3.55
111 112 5.812127 GCAGTTAGGGATTTAGCAAAAATGG 59.188 40.000 2.14 0.00 0.00 3.16
112 113 5.812127 GGCAGTTAGGGATTTAGCAAAAATG 59.188 40.000 2.14 0.00 0.00 2.32
113 114 5.483583 TGGCAGTTAGGGATTTAGCAAAAAT 59.516 36.000 0.00 0.00 0.00 1.82
114 115 4.835615 TGGCAGTTAGGGATTTAGCAAAAA 59.164 37.500 0.00 0.00 0.00 1.94
115 116 4.411927 TGGCAGTTAGGGATTTAGCAAAA 58.588 39.130 0.00 0.00 0.00 2.44
116 117 4.040936 TGGCAGTTAGGGATTTAGCAAA 57.959 40.909 0.00 0.00 0.00 3.68
117 118 3.730215 TGGCAGTTAGGGATTTAGCAA 57.270 42.857 0.00 0.00 0.00 3.91
118 119 3.951563 ATGGCAGTTAGGGATTTAGCA 57.048 42.857 0.00 0.00 0.00 3.49
119 120 4.327680 CCTATGGCAGTTAGGGATTTAGC 58.672 47.826 6.31 0.00 33.86 3.09
134 135 4.078639 AGTTCTTGACTATGCCTATGGC 57.921 45.455 1.01 1.01 42.76 4.40
135 136 5.992217 GGTTAGTTCTTGACTATGCCTATGG 59.008 44.000 0.00 0.00 40.44 2.74
136 137 6.821388 AGGTTAGTTCTTGACTATGCCTATG 58.179 40.000 7.57 0.00 41.15 2.23
137 138 6.611642 TGAGGTTAGTTCTTGACTATGCCTAT 59.388 38.462 8.71 0.00 42.09 2.57
138 139 5.955959 TGAGGTTAGTTCTTGACTATGCCTA 59.044 40.000 8.71 0.00 42.09 3.93
139 140 4.777896 TGAGGTTAGTTCTTGACTATGCCT 59.222 41.667 8.56 8.56 43.41 4.75
140 141 5.086104 TGAGGTTAGTTCTTGACTATGCC 57.914 43.478 0.00 0.00 40.44 4.40
141 142 7.119846 ACAAATGAGGTTAGTTCTTGACTATGC 59.880 37.037 0.00 0.00 40.44 3.14
142 143 8.553459 ACAAATGAGGTTAGTTCTTGACTATG 57.447 34.615 0.00 0.00 40.44 2.23
143 144 8.375506 TGACAAATGAGGTTAGTTCTTGACTAT 58.624 33.333 0.00 0.00 40.44 2.12
144 145 7.656137 GTGACAAATGAGGTTAGTTCTTGACTA 59.344 37.037 0.00 0.00 39.86 2.59
145 146 6.483640 GTGACAAATGAGGTTAGTTCTTGACT 59.516 38.462 0.00 0.00 42.55 3.41
146 147 6.260050 TGTGACAAATGAGGTTAGTTCTTGAC 59.740 38.462 0.00 0.00 0.00 3.18
147 148 6.353323 TGTGACAAATGAGGTTAGTTCTTGA 58.647 36.000 0.00 0.00 0.00 3.02
148 149 6.483307 TCTGTGACAAATGAGGTTAGTTCTTG 59.517 38.462 0.00 0.00 0.00 3.02
149 150 6.591935 TCTGTGACAAATGAGGTTAGTTCTT 58.408 36.000 0.00 0.00 0.00 2.52
150 151 6.174720 TCTGTGACAAATGAGGTTAGTTCT 57.825 37.500 0.00 0.00 0.00 3.01
151 152 5.992217 ACTCTGTGACAAATGAGGTTAGTTC 59.008 40.000 5.49 0.00 0.00 3.01
152 153 5.930135 ACTCTGTGACAAATGAGGTTAGTT 58.070 37.500 5.49 0.00 0.00 2.24
153 154 5.552870 ACTCTGTGACAAATGAGGTTAGT 57.447 39.130 5.49 0.00 0.00 2.24
154 155 5.578727 GCTACTCTGTGACAAATGAGGTTAG 59.421 44.000 5.49 1.22 0.00 2.34
155 156 5.479306 GCTACTCTGTGACAAATGAGGTTA 58.521 41.667 5.49 0.00 0.00 2.85
156 157 4.319177 GCTACTCTGTGACAAATGAGGTT 58.681 43.478 5.49 0.00 0.00 3.50
157 158 3.307059 GGCTACTCTGTGACAAATGAGGT 60.307 47.826 5.49 0.00 0.00 3.85
158 159 3.265791 GGCTACTCTGTGACAAATGAGG 58.734 50.000 5.49 0.00 0.00 3.86
159 160 2.926200 CGGCTACTCTGTGACAAATGAG 59.074 50.000 0.00 0.00 0.00 2.90
160 161 2.299013 ACGGCTACTCTGTGACAAATGA 59.701 45.455 0.00 0.00 31.81 2.57
161 162 2.668457 GACGGCTACTCTGTGACAAATG 59.332 50.000 0.00 0.00 33.57 2.32
162 163 2.671351 CGACGGCTACTCTGTGACAAAT 60.671 50.000 0.00 0.00 33.57 2.32
163 164 1.335597 CGACGGCTACTCTGTGACAAA 60.336 52.381 0.00 0.00 33.57 2.83
164 165 0.240145 CGACGGCTACTCTGTGACAA 59.760 55.000 0.00 0.00 33.57 3.18
165 166 1.583495 CCGACGGCTACTCTGTGACA 61.583 60.000 0.00 0.00 33.57 3.58
166 167 1.136984 CCGACGGCTACTCTGTGAC 59.863 63.158 0.00 0.00 33.57 3.67
167 168 1.002990 TCCGACGGCTACTCTGTGA 60.003 57.895 9.66 0.00 33.57 3.58
168 169 1.136984 GTCCGACGGCTACTCTGTG 59.863 63.158 9.66 0.00 33.57 3.66
169 170 2.396955 CGTCCGACGGCTACTCTGT 61.397 63.158 13.29 0.00 38.08 3.41
170 171 2.104859 TCGTCCGACGGCTACTCTG 61.105 63.158 20.35 0.00 42.81 3.35
171 172 2.105466 GTCGTCCGACGGCTACTCT 61.105 63.158 18.10 0.00 43.82 3.24
172 173 2.402787 GTCGTCCGACGGCTACTC 59.597 66.667 18.10 0.89 43.82 2.59
180 181 2.649843 GATCCAGCTCGTCGTCCGAC 62.650 65.000 9.69 9.69 41.60 4.79
181 182 2.437895 ATCCAGCTCGTCGTCCGA 60.438 61.111 0.00 0.53 45.00 4.55
182 183 2.024871 GATCCAGCTCGTCGTCCG 59.975 66.667 0.00 0.00 38.13 4.79
183 184 1.668101 AAGGATCCAGCTCGTCGTCC 61.668 60.000 15.82 0.00 0.00 4.79
184 185 0.248702 GAAGGATCCAGCTCGTCGTC 60.249 60.000 15.82 0.00 0.00 4.20
185 186 0.965866 TGAAGGATCCAGCTCGTCGT 60.966 55.000 15.82 0.00 0.00 4.34
186 187 0.526524 GTGAAGGATCCAGCTCGTCG 60.527 60.000 15.82 0.00 0.00 5.12
187 188 0.820871 AGTGAAGGATCCAGCTCGTC 59.179 55.000 15.82 5.22 0.00 4.20
188 189 0.820871 GAGTGAAGGATCCAGCTCGT 59.179 55.000 15.82 0.00 0.00 4.18
189 190 0.103937 GGAGTGAAGGATCCAGCTCG 59.896 60.000 15.82 0.00 35.54 5.03
190 191 1.198713 TGGAGTGAAGGATCCAGCTC 58.801 55.000 15.82 14.17 40.70 4.09
191 192 1.558756 CTTGGAGTGAAGGATCCAGCT 59.441 52.381 15.82 5.81 46.01 4.24
192 193 1.556911 TCTTGGAGTGAAGGATCCAGC 59.443 52.381 15.82 5.67 46.01 4.85
193 194 4.202305 GGTATCTTGGAGTGAAGGATCCAG 60.202 50.000 15.82 0.00 46.01 3.86
194 195 3.711704 GGTATCTTGGAGTGAAGGATCCA 59.288 47.826 15.82 0.00 43.87 3.41
195 196 3.711704 TGGTATCTTGGAGTGAAGGATCC 59.288 47.826 2.48 2.48 36.05 3.36
196 197 5.559148 ATGGTATCTTGGAGTGAAGGATC 57.441 43.478 0.00 0.00 0.00 3.36
197 198 5.545723 CCTATGGTATCTTGGAGTGAAGGAT 59.454 44.000 0.00 0.00 0.00 3.24
198 199 4.901849 CCTATGGTATCTTGGAGTGAAGGA 59.098 45.833 0.00 0.00 0.00 3.36
199 200 4.040952 CCCTATGGTATCTTGGAGTGAAGG 59.959 50.000 0.00 0.00 0.00 3.46
200 201 4.040952 CCCCTATGGTATCTTGGAGTGAAG 59.959 50.000 0.00 0.00 0.00 3.02
201 202 3.973973 CCCCTATGGTATCTTGGAGTGAA 59.026 47.826 0.00 0.00 0.00 3.18
202 203 3.208922 TCCCCTATGGTATCTTGGAGTGA 59.791 47.826 0.00 0.00 34.77 3.41
203 204 3.325135 GTCCCCTATGGTATCTTGGAGTG 59.675 52.174 0.00 0.00 34.77 3.51
204 205 3.588569 GTCCCCTATGGTATCTTGGAGT 58.411 50.000 0.00 0.00 34.77 3.85
205 206 2.563179 CGTCCCCTATGGTATCTTGGAG 59.437 54.545 0.00 0.00 34.77 3.86
206 207 2.178325 TCGTCCCCTATGGTATCTTGGA 59.822 50.000 0.00 0.00 34.77 3.53
207 208 2.563179 CTCGTCCCCTATGGTATCTTGG 59.437 54.545 0.00 0.00 34.77 3.61
208 209 2.028930 GCTCGTCCCCTATGGTATCTTG 60.029 54.545 0.00 0.00 34.77 3.02
209 210 2.158295 AGCTCGTCCCCTATGGTATCTT 60.158 50.000 0.00 0.00 34.77 2.40
210 211 1.429687 AGCTCGTCCCCTATGGTATCT 59.570 52.381 0.00 0.00 34.77 1.98
211 212 1.546476 CAGCTCGTCCCCTATGGTATC 59.454 57.143 0.00 0.00 34.77 2.24
212 213 1.633774 CAGCTCGTCCCCTATGGTAT 58.366 55.000 0.00 0.00 34.77 2.73
213 214 0.469331 CCAGCTCGTCCCCTATGGTA 60.469 60.000 0.00 0.00 34.77 3.25
214 215 1.762460 CCAGCTCGTCCCCTATGGT 60.762 63.158 0.00 0.00 34.77 3.55
215 216 1.457643 TCCAGCTCGTCCCCTATGG 60.458 63.158 0.00 0.00 0.00 2.74
216 217 1.742768 GTCCAGCTCGTCCCCTATG 59.257 63.158 0.00 0.00 0.00 2.23
217 218 1.828660 CGTCCAGCTCGTCCCCTAT 60.829 63.158 0.00 0.00 0.00 2.57
218 219 2.439701 CGTCCAGCTCGTCCCCTA 60.440 66.667 0.00 0.00 0.00 3.53
244 245 3.730761 CACGCCACCAGCAAGCTC 61.731 66.667 0.00 0.00 44.04 4.09
247 248 3.052082 CTCCACGCCACCAGCAAG 61.052 66.667 0.00 0.00 44.04 4.01
248 249 3.113514 TTCTCCACGCCACCAGCAA 62.114 57.895 0.00 0.00 44.04 3.91
249 250 3.535629 CTTCTCCACGCCACCAGCA 62.536 63.158 0.00 0.00 44.04 4.41
250 251 2.743928 CTTCTCCACGCCACCAGC 60.744 66.667 0.00 0.00 38.52 4.85
251 252 2.743928 GCTTCTCCACGCCACCAG 60.744 66.667 0.00 0.00 0.00 4.00
252 253 3.241530 AGCTTCTCCACGCCACCA 61.242 61.111 0.00 0.00 0.00 4.17
253 254 2.743928 CAGCTTCTCCACGCCACC 60.744 66.667 0.00 0.00 0.00 4.61
254 255 3.426568 GCAGCTTCTCCACGCCAC 61.427 66.667 0.00 0.00 0.00 5.01
255 256 3.630013 AGCAGCTTCTCCACGCCA 61.630 61.111 0.00 0.00 0.00 5.69
256 257 3.123620 CAGCAGCTTCTCCACGCC 61.124 66.667 0.00 0.00 0.00 5.68
257 258 3.797546 GCAGCAGCTTCTCCACGC 61.798 66.667 0.00 0.00 37.91 5.34
271 272 3.795041 CCCCCTCAGCTCCAGCAG 61.795 72.222 0.48 0.00 45.16 4.24
290 291 3.023116 TTCCCCATCTGCCCCCTG 61.023 66.667 0.00 0.00 0.00 4.45
291 292 3.023735 GTTCCCCATCTGCCCCCT 61.024 66.667 0.00 0.00 0.00 4.79
292 293 4.506255 CGTTCCCCATCTGCCCCC 62.506 72.222 0.00 0.00 0.00 5.40
293 294 3.406595 CTCGTTCCCCATCTGCCCC 62.407 68.421 0.00 0.00 0.00 5.80
294 295 2.190578 CTCGTTCCCCATCTGCCC 59.809 66.667 0.00 0.00 0.00 5.36
295 296 1.450312 CACTCGTTCCCCATCTGCC 60.450 63.158 0.00 0.00 0.00 4.85
296 297 1.450312 CCACTCGTTCCCCATCTGC 60.450 63.158 0.00 0.00 0.00 4.26
297 298 0.176680 CTCCACTCGTTCCCCATCTG 59.823 60.000 0.00 0.00 0.00 2.90
298 299 1.617947 GCTCCACTCGTTCCCCATCT 61.618 60.000 0.00 0.00 0.00 2.90
299 300 1.153349 GCTCCACTCGTTCCCCATC 60.153 63.158 0.00 0.00 0.00 3.51
300 301 1.613630 AGCTCCACTCGTTCCCCAT 60.614 57.895 0.00 0.00 0.00 4.00
301 302 2.203788 AGCTCCACTCGTTCCCCA 60.204 61.111 0.00 0.00 0.00 4.96
302 303 2.266055 CAGCTCCACTCGTTCCCC 59.734 66.667 0.00 0.00 0.00 4.81
303 304 2.232298 CTCCAGCTCCACTCGTTCCC 62.232 65.000 0.00 0.00 0.00 3.97
304 305 1.216710 CTCCAGCTCCACTCGTTCC 59.783 63.158 0.00 0.00 0.00 3.62
305 306 1.446966 GCTCCAGCTCCACTCGTTC 60.447 63.158 0.00 0.00 38.21 3.95
306 307 2.659610 GCTCCAGCTCCACTCGTT 59.340 61.111 0.00 0.00 38.21 3.85
316 317 4.459089 GTCCGGTCCAGCTCCAGC 62.459 72.222 0.00 0.00 42.49 4.85
317 318 4.135153 CGTCCGGTCCAGCTCCAG 62.135 72.222 0.00 0.00 0.00 3.86
318 319 4.988716 ACGTCCGGTCCAGCTCCA 62.989 66.667 0.00 0.00 0.00 3.86
319 320 4.436998 CACGTCCGGTCCAGCTCC 62.437 72.222 0.00 0.00 0.00 4.70
320 321 2.927580 TTCACGTCCGGTCCAGCTC 61.928 63.158 0.00 0.00 0.00 4.09
321 322 2.915659 TTCACGTCCGGTCCAGCT 60.916 61.111 0.00 0.00 0.00 4.24
322 323 2.737376 GTTCACGTCCGGTCCAGC 60.737 66.667 0.00 0.00 0.00 4.85
323 324 1.080705 GAGTTCACGTCCGGTCCAG 60.081 63.158 0.00 0.00 0.00 3.86
324 325 2.911484 CGAGTTCACGTCCGGTCCA 61.911 63.158 0.00 0.00 0.00 4.02
325 326 1.930908 ATCGAGTTCACGTCCGGTCC 61.931 60.000 0.00 0.00 34.70 4.46
326 327 0.109412 AATCGAGTTCACGTCCGGTC 60.109 55.000 0.00 0.00 34.70 4.79
327 328 0.109412 GAATCGAGTTCACGTCCGGT 60.109 55.000 0.00 0.00 36.80 5.28
328 329 0.801067 GGAATCGAGTTCACGTCCGG 60.801 60.000 0.00 0.00 38.64 5.14
329 330 1.132199 CGGAATCGAGTTCACGTCCG 61.132 60.000 0.00 0.00 42.17 4.79
330 331 0.169672 TCGGAATCGAGTTCACGTCC 59.830 55.000 0.00 0.00 40.88 4.79
331 332 1.257539 GTCGGAATCGAGTTCACGTC 58.742 55.000 0.00 0.00 46.91 4.34
332 333 0.594602 TGTCGGAATCGAGTTCACGT 59.405 50.000 0.00 0.00 46.91 4.49
333 334 1.909376 ATGTCGGAATCGAGTTCACG 58.091 50.000 0.00 0.00 46.91 4.35
334 335 4.030134 ACTATGTCGGAATCGAGTTCAC 57.970 45.455 0.00 0.00 46.91 3.18
335 336 4.713824 AACTATGTCGGAATCGAGTTCA 57.286 40.909 0.00 0.00 46.91 3.18
336 337 7.434307 TGAATTAACTATGTCGGAATCGAGTTC 59.566 37.037 0.00 0.00 46.91 3.01
337 338 7.262772 TGAATTAACTATGTCGGAATCGAGTT 58.737 34.615 0.00 0.00 46.91 3.01
338 339 6.802608 TGAATTAACTATGTCGGAATCGAGT 58.197 36.000 0.00 0.00 46.91 4.18
339 340 6.363626 CCTGAATTAACTATGTCGGAATCGAG 59.636 42.308 0.00 0.00 46.91 4.04
340 341 6.183360 ACCTGAATTAACTATGTCGGAATCGA 60.183 38.462 0.00 0.00 43.86 3.59
341 342 5.983720 ACCTGAATTAACTATGTCGGAATCG 59.016 40.000 0.00 0.00 37.82 3.34
342 343 6.761714 ACACCTGAATTAACTATGTCGGAATC 59.238 38.462 0.00 0.00 0.00 2.52
343 344 6.538742 CACACCTGAATTAACTATGTCGGAAT 59.461 38.462 0.00 0.00 0.00 3.01
344 345 5.872617 CACACCTGAATTAACTATGTCGGAA 59.127 40.000 0.00 0.00 0.00 4.30
345 346 5.416083 CACACCTGAATTAACTATGTCGGA 58.584 41.667 0.00 0.00 0.00 4.55
346 347 4.034048 GCACACCTGAATTAACTATGTCGG 59.966 45.833 0.00 0.00 0.00 4.79
347 348 4.870426 AGCACACCTGAATTAACTATGTCG 59.130 41.667 0.00 0.00 0.00 4.35
348 349 8.979574 GTATAGCACACCTGAATTAACTATGTC 58.020 37.037 0.00 0.00 0.00 3.06
349 350 8.705594 AGTATAGCACACCTGAATTAACTATGT 58.294 33.333 0.00 0.00 0.00 2.29
350 351 8.982685 CAGTATAGCACACCTGAATTAACTATG 58.017 37.037 0.00 0.00 0.00 2.23
351 352 7.657761 GCAGTATAGCACACCTGAATTAACTAT 59.342 37.037 0.00 0.00 0.00 2.12
352 353 6.984474 GCAGTATAGCACACCTGAATTAACTA 59.016 38.462 0.00 0.00 0.00 2.24
353 354 5.817816 GCAGTATAGCACACCTGAATTAACT 59.182 40.000 0.00 0.00 0.00 2.24
354 355 5.584649 TGCAGTATAGCACACCTGAATTAAC 59.415 40.000 0.00 0.00 40.11 2.01
355 356 5.739959 TGCAGTATAGCACACCTGAATTAA 58.260 37.500 0.00 0.00 40.11 1.40
356 357 5.351948 TGCAGTATAGCACACCTGAATTA 57.648 39.130 0.00 0.00 40.11 1.40
357 358 4.194640 CTGCAGTATAGCACACCTGAATT 58.805 43.478 5.25 0.00 40.11 2.17
358 359 3.432749 CCTGCAGTATAGCACACCTGAAT 60.433 47.826 13.81 0.00 40.11 2.57
359 360 2.093500 CCTGCAGTATAGCACACCTGAA 60.093 50.000 13.81 0.00 40.11 3.02
360 361 1.482182 CCTGCAGTATAGCACACCTGA 59.518 52.381 13.81 0.00 40.11 3.86
361 362 1.208052 ACCTGCAGTATAGCACACCTG 59.792 52.381 13.81 0.00 40.11 4.00
362 363 1.573108 ACCTGCAGTATAGCACACCT 58.427 50.000 13.81 0.00 40.11 4.00
363 364 2.009774 CAACCTGCAGTATAGCACACC 58.990 52.381 13.81 0.00 40.11 4.16
364 365 2.972625 TCAACCTGCAGTATAGCACAC 58.027 47.619 13.81 0.00 40.11 3.82
365 366 3.912496 ATCAACCTGCAGTATAGCACA 57.088 42.857 13.81 0.00 40.11 4.57
366 367 6.538742 TCTTTTATCAACCTGCAGTATAGCAC 59.461 38.462 13.81 0.00 40.11 4.40
367 368 6.649155 TCTTTTATCAACCTGCAGTATAGCA 58.351 36.000 13.81 0.00 43.35 3.49
368 369 7.553881 TTCTTTTATCAACCTGCAGTATAGC 57.446 36.000 13.81 0.00 0.00 2.97
371 372 8.253113 CCATTTTCTTTTATCAACCTGCAGTAT 58.747 33.333 13.81 3.31 0.00 2.12
372 373 7.601856 CCATTTTCTTTTATCAACCTGCAGTA 58.398 34.615 13.81 0.00 0.00 2.74
373 374 6.458210 CCATTTTCTTTTATCAACCTGCAGT 58.542 36.000 13.81 0.00 0.00 4.40
374 375 5.349543 GCCATTTTCTTTTATCAACCTGCAG 59.650 40.000 6.78 6.78 0.00 4.41
375 376 5.221601 TGCCATTTTCTTTTATCAACCTGCA 60.222 36.000 0.00 0.00 0.00 4.41
376 377 5.237048 TGCCATTTTCTTTTATCAACCTGC 58.763 37.500 0.00 0.00 0.00 4.85
377 378 6.458210 ACTGCCATTTTCTTTTATCAACCTG 58.542 36.000 0.00 0.00 0.00 4.00
378 379 6.670695 ACTGCCATTTTCTTTTATCAACCT 57.329 33.333 0.00 0.00 0.00 3.50
379 380 7.728847 AAACTGCCATTTTCTTTTATCAACC 57.271 32.000 0.00 0.00 0.00 3.77
410 411 3.389211 CAGCGCACGCACTTTTGC 61.389 61.111 18.24 0.00 46.21 3.68
411 412 2.005537 GTCAGCGCACGCACTTTTG 61.006 57.895 18.24 6.34 44.88 2.44
412 413 2.327940 GTCAGCGCACGCACTTTT 59.672 55.556 18.24 0.00 44.88 2.27
413 414 3.649986 GGTCAGCGCACGCACTTT 61.650 61.111 18.24 0.00 44.88 2.66
423 424 2.820767 GAAGACTGGACCGGTCAGCG 62.821 65.000 34.40 23.01 41.77 5.18
424 425 1.079750 GAAGACTGGACCGGTCAGC 60.080 63.158 34.40 19.44 41.77 4.26
425 426 1.213013 CGAAGACTGGACCGGTCAG 59.787 63.158 34.40 28.35 41.77 3.51
426 427 2.273179 CCGAAGACTGGACCGGTCA 61.273 63.158 34.40 19.72 41.77 4.02
427 428 1.935327 CTCCGAAGACTGGACCGGTC 61.935 65.000 27.04 27.04 42.34 4.79
428 429 1.977544 CTCCGAAGACTGGACCGGT 60.978 63.158 6.92 6.92 42.34 5.28
429 430 1.038130 ATCTCCGAAGACTGGACCGG 61.038 60.000 0.00 0.00 43.02 5.28
430 431 0.101399 CATCTCCGAAGACTGGACCG 59.899 60.000 0.00 0.00 33.32 4.79
431 432 0.461961 CCATCTCCGAAGACTGGACC 59.538 60.000 0.00 0.00 34.60 4.46
432 433 1.134965 CACCATCTCCGAAGACTGGAC 60.135 57.143 7.03 0.00 35.47 4.02
433 434 1.186200 CACCATCTCCGAAGACTGGA 58.814 55.000 7.03 0.00 35.47 3.86
434 435 0.898320 ACACCATCTCCGAAGACTGG 59.102 55.000 0.00 0.00 36.78 4.00
435 436 2.492088 TGTACACCATCTCCGAAGACTG 59.508 50.000 0.00 0.00 33.32 3.51
436 437 2.492484 GTGTACACCATCTCCGAAGACT 59.508 50.000 15.42 0.00 33.32 3.24
437 438 2.230508 TGTGTACACCATCTCCGAAGAC 59.769 50.000 22.91 0.00 33.32 3.01
438 439 2.521126 TGTGTACACCATCTCCGAAGA 58.479 47.619 22.91 0.00 35.54 2.87
439 440 3.119137 TCATGTGTACACCATCTCCGAAG 60.119 47.826 22.91 0.00 0.00 3.79
440 441 2.829120 TCATGTGTACACCATCTCCGAA 59.171 45.455 22.91 1.35 0.00 4.30
441 442 2.452505 TCATGTGTACACCATCTCCGA 58.547 47.619 22.91 2.11 0.00 4.55
442 443 2.959507 TCATGTGTACACCATCTCCG 57.040 50.000 22.91 4.14 0.00 4.63
443 444 4.572389 GTCAATCATGTGTACACCATCTCC 59.428 45.833 22.91 0.00 0.00 3.71
444 445 4.572389 GGTCAATCATGTGTACACCATCTC 59.428 45.833 22.91 6.31 0.00 2.75
445 446 4.517285 GGTCAATCATGTGTACACCATCT 58.483 43.478 22.91 3.15 0.00 2.90
446 447 3.309682 CGGTCAATCATGTGTACACCATC 59.690 47.826 22.91 0.00 0.00 3.51
447 448 3.270027 CGGTCAATCATGTGTACACCAT 58.730 45.455 22.91 13.25 0.00 3.55
448 449 2.614229 CCGGTCAATCATGTGTACACCA 60.614 50.000 22.91 11.55 0.00 4.17
449 450 2.006888 CCGGTCAATCATGTGTACACC 58.993 52.381 22.91 6.06 0.00 4.16
450 451 2.671396 GACCGGTCAATCATGTGTACAC 59.329 50.000 29.75 19.36 0.00 2.90
451 452 2.354303 GGACCGGTCAATCATGTGTACA 60.354 50.000 34.40 0.00 0.00 2.90
452 453 2.277084 GGACCGGTCAATCATGTGTAC 58.723 52.381 34.40 9.99 0.00 2.90
453 454 1.903183 TGGACCGGTCAATCATGTGTA 59.097 47.619 34.40 5.71 0.00 2.90
454 455 0.690192 TGGACCGGTCAATCATGTGT 59.310 50.000 34.40 0.00 0.00 3.72
455 456 1.086696 GTGGACCGGTCAATCATGTG 58.913 55.000 34.40 0.00 0.00 3.21
456 457 0.035439 GGTGGACCGGTCAATCATGT 60.035 55.000 34.40 0.00 0.00 3.21
457 458 0.253044 AGGTGGACCGGTCAATCATG 59.747 55.000 34.40 0.00 42.08 3.07
458 459 0.253044 CAGGTGGACCGGTCAATCAT 59.747 55.000 34.40 18.66 42.08 2.45
459 460 1.676968 CAGGTGGACCGGTCAATCA 59.323 57.895 34.40 21.12 42.08 2.57
460 461 1.078426 CCAGGTGGACCGGTCAATC 60.078 63.158 34.40 25.67 42.08 2.67
461 462 3.077907 CCAGGTGGACCGGTCAAT 58.922 61.111 34.40 14.91 42.08 2.57
462 463 3.948719 GCCAGGTGGACCGGTCAA 61.949 66.667 34.40 23.48 42.08 3.18
463 464 4.954118 AGCCAGGTGGACCGGTCA 62.954 66.667 34.40 18.59 42.08 4.02
464 465 4.394712 CAGCCAGGTGGACCGGTC 62.395 72.222 27.04 27.04 42.08 4.79
468 469 3.590466 ATTGGCAGCCAGGTGGACC 62.590 63.158 15.50 0.00 37.39 4.46
469 470 1.607467 AATTGGCAGCCAGGTGGAC 60.607 57.895 15.50 0.00 37.39 4.02
470 471 1.607178 CAATTGGCAGCCAGGTGGA 60.607 57.895 15.50 0.00 37.39 4.02
471 472 2.652095 CCAATTGGCAGCCAGGTGG 61.652 63.158 24.24 24.24 34.50 4.61
472 473 2.975536 CCAATTGGCAGCCAGGTG 59.024 61.111 15.50 16.01 33.81 4.00
482 483 0.813184 AATCACAGCTCGCCAATTGG 59.187 50.000 20.81 20.81 38.53 3.16
483 484 1.468565 CCAATCACAGCTCGCCAATTG 60.469 52.381 0.00 0.00 0.00 2.32
484 485 0.813184 CCAATCACAGCTCGCCAATT 59.187 50.000 0.00 0.00 0.00 2.32
485 486 1.660560 GCCAATCACAGCTCGCCAAT 61.661 55.000 0.00 0.00 0.00 3.16
486 487 2.334946 GCCAATCACAGCTCGCCAA 61.335 57.895 0.00 0.00 0.00 4.52
487 488 2.747460 GCCAATCACAGCTCGCCA 60.747 61.111 0.00 0.00 0.00 5.69
488 489 3.512516 GGCCAATCACAGCTCGCC 61.513 66.667 0.00 0.00 0.00 5.54
489 490 2.437359 AGGCCAATCACAGCTCGC 60.437 61.111 5.01 0.00 0.00 5.03
490 491 1.078918 TCAGGCCAATCACAGCTCG 60.079 57.895 5.01 0.00 0.00 5.03
491 492 0.251354 TCTCAGGCCAATCACAGCTC 59.749 55.000 5.01 0.00 0.00 4.09
492 493 0.035630 GTCTCAGGCCAATCACAGCT 60.036 55.000 5.01 0.00 0.00 4.24
493 494 0.035630 AGTCTCAGGCCAATCACAGC 60.036 55.000 5.01 0.00 0.00 4.40
494 495 3.616956 TTAGTCTCAGGCCAATCACAG 57.383 47.619 5.01 0.00 0.00 3.66
495 496 4.019411 TGATTTAGTCTCAGGCCAATCACA 60.019 41.667 5.01 0.00 0.00 3.58
496 497 4.517285 TGATTTAGTCTCAGGCCAATCAC 58.483 43.478 5.01 0.00 0.00 3.06
497 498 4.842531 TGATTTAGTCTCAGGCCAATCA 57.157 40.909 5.01 6.12 0.00 2.57
498 499 5.238214 GTGATGATTTAGTCTCAGGCCAATC 59.762 44.000 5.01 3.16 0.00 2.67
499 500 5.128919 GTGATGATTTAGTCTCAGGCCAAT 58.871 41.667 5.01 0.00 0.00 3.16
500 501 4.019411 TGTGATGATTTAGTCTCAGGCCAA 60.019 41.667 5.01 0.00 0.00 4.52
501 502 3.519107 TGTGATGATTTAGTCTCAGGCCA 59.481 43.478 5.01 0.00 0.00 5.36
502 503 4.142609 TGTGATGATTTAGTCTCAGGCC 57.857 45.455 0.00 0.00 0.00 5.19
503 504 5.363101 TCATGTGATGATTTAGTCTCAGGC 58.637 41.667 0.00 0.00 33.59 4.85
504 505 5.990386 CCTCATGTGATGATTTAGTCTCAGG 59.010 44.000 0.00 0.00 38.85 3.86
505 506 6.580788 ACCTCATGTGATGATTTAGTCTCAG 58.419 40.000 0.00 0.00 38.85 3.35
506 507 6.550938 ACCTCATGTGATGATTTAGTCTCA 57.449 37.500 0.00 0.00 38.85 3.27
521 522 3.508845 ACCTTAACTTGCACCTCATGT 57.491 42.857 0.00 0.00 34.90 3.21
522 523 4.336433 CCATACCTTAACTTGCACCTCATG 59.664 45.833 0.00 0.00 0.00 3.07
523 524 4.018415 ACCATACCTTAACTTGCACCTCAT 60.018 41.667 0.00 0.00 0.00 2.90
524 525 3.329520 ACCATACCTTAACTTGCACCTCA 59.670 43.478 0.00 0.00 0.00 3.86
525 526 3.939592 GACCATACCTTAACTTGCACCTC 59.060 47.826 0.00 0.00 0.00 3.85
526 527 3.587506 AGACCATACCTTAACTTGCACCT 59.412 43.478 0.00 0.00 0.00 4.00
527 528 3.689649 CAGACCATACCTTAACTTGCACC 59.310 47.826 0.00 0.00 0.00 5.01
528 529 3.127030 GCAGACCATACCTTAACTTGCAC 59.873 47.826 0.00 0.00 0.00 4.57
529 530 3.244735 TGCAGACCATACCTTAACTTGCA 60.245 43.478 0.00 0.00 0.00 4.08
530 531 3.343617 TGCAGACCATACCTTAACTTGC 58.656 45.455 0.00 0.00 0.00 4.01
531 532 5.003804 ACTTGCAGACCATACCTTAACTTG 58.996 41.667 0.00 0.00 0.00 3.16
532 533 5.242795 ACTTGCAGACCATACCTTAACTT 57.757 39.130 0.00 0.00 0.00 2.66
533 534 4.910458 ACTTGCAGACCATACCTTAACT 57.090 40.909 0.00 0.00 0.00 2.24
534 535 5.585047 CCTAACTTGCAGACCATACCTTAAC 59.415 44.000 0.00 0.00 0.00 2.01
535 536 5.338871 CCCTAACTTGCAGACCATACCTTAA 60.339 44.000 0.00 0.00 0.00 1.85
536 537 4.163458 CCCTAACTTGCAGACCATACCTTA 59.837 45.833 0.00 0.00 0.00 2.69
537 538 3.054361 CCCTAACTTGCAGACCATACCTT 60.054 47.826 0.00 0.00 0.00 3.50
538 539 2.505819 CCCTAACTTGCAGACCATACCT 59.494 50.000 0.00 0.00 0.00 3.08
539 540 2.238898 ACCCTAACTTGCAGACCATACC 59.761 50.000 0.00 0.00 0.00 2.73
540 541 3.629142 ACCCTAACTTGCAGACCATAC 57.371 47.619 0.00 0.00 0.00 2.39
541 542 4.359105 AGTACCCTAACTTGCAGACCATA 58.641 43.478 0.00 0.00 0.00 2.74
542 543 3.182152 AGTACCCTAACTTGCAGACCAT 58.818 45.455 0.00 0.00 0.00 3.55
543 544 2.616524 AGTACCCTAACTTGCAGACCA 58.383 47.619 0.00 0.00 0.00 4.02
544 545 5.354842 AATAGTACCCTAACTTGCAGACC 57.645 43.478 0.00 0.00 0.00 3.85
545 546 5.975939 CGTAATAGTACCCTAACTTGCAGAC 59.024 44.000 0.00 0.00 0.00 3.51
546 547 5.653769 ACGTAATAGTACCCTAACTTGCAGA 59.346 40.000 0.00 0.00 0.00 4.26
547 548 5.899299 ACGTAATAGTACCCTAACTTGCAG 58.101 41.667 0.00 0.00 0.00 4.41
548 549 5.163519 GGACGTAATAGTACCCTAACTTGCA 60.164 44.000 0.00 0.00 0.00 4.08
549 550 5.163519 TGGACGTAATAGTACCCTAACTTGC 60.164 44.000 0.00 0.00 0.00 4.01
550 551 6.455360 TGGACGTAATAGTACCCTAACTTG 57.545 41.667 0.00 0.00 0.00 3.16
551 552 5.595952 CCTGGACGTAATAGTACCCTAACTT 59.404 44.000 0.00 0.00 0.00 2.66
552 553 5.103940 TCCTGGACGTAATAGTACCCTAACT 60.104 44.000 0.00 0.00 0.00 2.24
553 554 5.133221 TCCTGGACGTAATAGTACCCTAAC 58.867 45.833 0.00 0.00 0.00 2.34
554 555 5.387113 TCCTGGACGTAATAGTACCCTAA 57.613 43.478 0.00 0.00 0.00 2.69
555 556 5.387113 TTCCTGGACGTAATAGTACCCTA 57.613 43.478 0.00 0.00 0.00 3.53
556 557 3.959495 TCCTGGACGTAATAGTACCCT 57.041 47.619 0.00 0.00 0.00 4.34
557 558 5.343307 TTTTCCTGGACGTAATAGTACCC 57.657 43.478 0.00 0.00 0.00 3.69
558 559 6.576185 TGATTTTCCTGGACGTAATAGTACC 58.424 40.000 0.00 0.00 0.00 3.34
559 560 7.307219 GCATGATTTTCCTGGACGTAATAGTAC 60.307 40.741 0.00 0.00 0.00 2.73
560 561 6.704493 GCATGATTTTCCTGGACGTAATAGTA 59.296 38.462 0.00 0.00 0.00 1.82
561 562 5.527582 GCATGATTTTCCTGGACGTAATAGT 59.472 40.000 0.00 0.00 0.00 2.12
562 563 5.333339 CGCATGATTTTCCTGGACGTAATAG 60.333 44.000 0.00 0.00 0.00 1.73
563 564 4.509970 CGCATGATTTTCCTGGACGTAATA 59.490 41.667 0.00 0.00 0.00 0.98
564 565 3.312421 CGCATGATTTTCCTGGACGTAAT 59.688 43.478 0.00 0.00 0.00 1.89
565 566 2.675844 CGCATGATTTTCCTGGACGTAA 59.324 45.455 0.00 0.00 0.00 3.18
566 567 2.276201 CGCATGATTTTCCTGGACGTA 58.724 47.619 0.00 0.00 0.00 3.57
567 568 1.086696 CGCATGATTTTCCTGGACGT 58.913 50.000 0.00 0.00 0.00 4.34
568 569 1.062587 GACGCATGATTTTCCTGGACG 59.937 52.381 0.00 0.00 0.00 4.79
569 570 1.062587 CGACGCATGATTTTCCTGGAC 59.937 52.381 0.00 0.00 0.00 4.02
570 571 1.368641 CGACGCATGATTTTCCTGGA 58.631 50.000 0.00 0.00 0.00 3.86
571 572 0.248215 GCGACGCATGATTTTCCTGG 60.248 55.000 16.42 0.00 0.00 4.45
688 690 9.647797 CAAATGTTTGGACATGTACTAGTAGTA 57.352 33.333 10.05 5.90 45.58 1.82
689 691 8.154856 ACAAATGTTTGGACATGTACTAGTAGT 58.845 33.333 10.05 8.14 45.58 2.73
690 692 8.443160 CACAAATGTTTGGACATGTACTAGTAG 58.557 37.037 10.05 0.00 45.58 2.57
691 693 7.934665 ACACAAATGTTTGGACATGTACTAGTA 59.065 33.333 10.05 0.00 45.58 1.82
693 695 7.202016 ACACAAATGTTTGGACATGTACTAG 57.798 36.000 10.05 0.00 45.58 2.57
695 697 7.446931 TCATACACAAATGTTTGGACATGTACT 59.553 33.333 10.05 0.00 45.58 2.73
696 698 7.537306 GTCATACACAAATGTTTGGACATGTAC 59.463 37.037 0.00 0.00 45.58 2.90
697 699 7.229506 TGTCATACACAAATGTTTGGACATGTA 59.770 33.333 0.00 9.00 45.58 2.29
698 700 6.040278 TGTCATACACAAATGTTTGGACATGT 59.960 34.615 0.00 0.00 45.58 3.21
710 712 6.017523 TGTCACGAATGTTGTCATACACAAAT 60.018 34.615 0.00 0.00 46.90 2.32
834 856 3.186283 TGACCAAAGCCACCTTCCTATA 58.814 45.455 0.00 0.00 0.00 1.31
837 859 0.111253 CTGACCAAAGCCACCTTCCT 59.889 55.000 0.00 0.00 0.00 3.36
838 860 0.895559 CCTGACCAAAGCCACCTTCC 60.896 60.000 0.00 0.00 0.00 3.46
839 861 0.110486 TCCTGACCAAAGCCACCTTC 59.890 55.000 0.00 0.00 0.00 3.46
840 862 0.555769 TTCCTGACCAAAGCCACCTT 59.444 50.000 0.00 0.00 0.00 3.50
1144 1203 3.378602 TTGCCGTAGCTCGCAGGA 61.379 61.111 0.00 0.00 40.80 3.86
1999 2144 9.677567 GAGCAAGTTTAGATACATCAAAACAAA 57.322 29.630 0.00 0.00 0.00 2.83
2062 2207 7.436536 AAAGAAAAGATAATTAATGCGTGCG 57.563 32.000 0.00 0.00 0.00 5.34
2104 2249 2.284190 GGCTAGCTCGAGCAATCTTTT 58.716 47.619 36.87 18.34 44.76 2.27
2111 2256 1.107538 ATAACGGGCTAGCTCGAGCA 61.108 55.000 41.69 25.20 43.62 4.26
2131 2286 8.845227 GTTTTTGAGAAGAAGAGAAGAGGAAAT 58.155 33.333 0.00 0.00 0.00 2.17
2136 2299 8.430801 TTCAGTTTTTGAGAAGAAGAGAAGAG 57.569 34.615 0.00 0.00 37.07 2.85
2137 2300 8.970859 ATTCAGTTTTTGAGAAGAAGAGAAGA 57.029 30.769 0.00 0.00 37.07 2.87
2138 2301 9.448294 CAATTCAGTTTTTGAGAAGAAGAGAAG 57.552 33.333 0.00 0.00 37.07 2.85
2139 2302 7.917505 GCAATTCAGTTTTTGAGAAGAAGAGAA 59.082 33.333 0.00 0.00 37.07 2.87
2140 2303 7.420800 GCAATTCAGTTTTTGAGAAGAAGAGA 58.579 34.615 0.00 0.00 37.07 3.10
2141 2304 6.640092 GGCAATTCAGTTTTTGAGAAGAAGAG 59.360 38.462 0.00 0.00 37.07 2.85
2142 2305 6.096705 TGGCAATTCAGTTTTTGAGAAGAAGA 59.903 34.615 0.00 0.00 37.07 2.87
2143 2306 6.199719 GTGGCAATTCAGTTTTTGAGAAGAAG 59.800 38.462 0.00 0.00 37.07 2.85
2266 2452 9.521841 AGAGTCTGGATGTAATCGATATCTTTA 57.478 33.333 0.00 0.00 46.86 1.85
2314 2500 2.493278 GGCTGTGTGCATCCTTAATGTT 59.507 45.455 0.00 0.00 45.15 2.71
2321 2507 1.200760 TGTAGGGCTGTGTGCATCCT 61.201 55.000 0.00 0.00 45.15 3.24
2414 2632 0.250727 CTCCGAGTTTTGCCTTCCCA 60.251 55.000 0.00 0.00 0.00 4.37
2424 2642 4.625607 AGAGAATTTGGACTCCGAGTTT 57.374 40.909 1.71 0.00 34.13 2.66
2425 2643 5.740290 TTAGAGAATTTGGACTCCGAGTT 57.260 39.130 1.71 0.00 34.13 3.01
2428 2646 5.932303 CACTTTTAGAGAATTTGGACTCCGA 59.068 40.000 0.00 0.00 34.13 4.55
2445 2663 4.699637 TCTTCTTGGAAGCGTCACTTTTA 58.300 39.130 1.14 0.00 39.29 1.52
2530 2750 1.069906 GCATTGTATTAAGAGCGCGGG 60.070 52.381 8.83 0.00 0.00 6.13
2543 2763 2.030363 CGGCCTTGTTGAAAGCATTGTA 60.030 45.455 0.00 0.00 0.00 2.41
2737 3065 1.070786 GCTTGTCAGGGGTGTCGAA 59.929 57.895 0.00 0.00 0.00 3.71
2793 3121 4.980805 GCGACGGTCTTGGTGCCA 62.981 66.667 6.57 0.00 0.00 4.92
2839 3167 0.108756 GTCTCGTAGGAGGTGTTGGC 60.109 60.000 12.31 0.00 40.85 4.52
2842 3170 1.893801 CTTGGTCTCGTAGGAGGTGTT 59.106 52.381 12.31 0.00 40.85 3.32
2871 3199 6.456181 CGCATCATCATCATCATCATCTTCAG 60.456 42.308 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.