Multiple sequence alignment - TraesCS4B01G361800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G361800 chr4B 100.000 4559 0 0 1 4559 650934173 650938731 0.000000e+00 8419.0
1 TraesCS4B01G361800 chr4B 89.173 508 51 2 1180 1686 631974037 631973533 8.320000e-177 630.0
2 TraesCS4B01G361800 chr4B 97.222 144 4 0 1736 1879 436308121 436307978 1.270000e-60 244.0
3 TraesCS4B01G361800 chr4B 92.982 57 0 3 3750 3802 219608026 219608082 3.780000e-11 80.5
4 TraesCS4B01G361800 chr4D 94.184 1410 54 12 2366 3752 504316553 504317957 0.000000e+00 2124.0
5 TraesCS4B01G361800 chr4D 84.878 1726 147 50 76 1738 504314553 504316227 0.000000e+00 1637.0
6 TraesCS4B01G361800 chr4D 94.545 330 16 2 1877 2204 504316225 504316554 4.070000e-140 508.0
7 TraesCS4B01G361800 chr4D 94.972 179 7 2 2198 2375 75782047 75782224 3.470000e-71 279.0
8 TraesCS4B01G361800 chr4D 79.180 317 52 14 4124 4437 504318382 504318687 1.660000e-49 207.0
9 TraesCS4B01G361800 chr4D 88.430 121 11 2 4234 4351 504320612 504320732 4.750000e-30 143.0
10 TraesCS4B01G361800 chr5A 91.905 1396 69 23 2366 3747 688963897 688965262 0.000000e+00 1912.0
11 TraesCS4B01G361800 chr5A 83.631 1008 105 28 633 1607 688962565 688963545 0.000000e+00 893.0
12 TraesCS4B01G361800 chr5A 82.584 534 67 5 1 529 688961898 688962410 9.000000e-122 448.0
13 TraesCS4B01G361800 chr5A 90.455 220 21 0 1180 1399 32012843 32013062 1.600000e-74 291.0
14 TraesCS4B01G361800 chr5A 91.667 144 9 3 1738 1879 565680751 565680609 3.600000e-46 196.0
15 TraesCS4B01G361800 chr5A 82.741 197 22 10 4117 4308 688965721 688965910 1.010000e-36 165.0
16 TraesCS4B01G361800 chr5A 88.550 131 10 3 4233 4358 688967821 688967951 2.200000e-33 154.0
17 TraesCS4B01G361800 chr2D 89.587 509 45 5 1180 1686 632563526 632563024 1.380000e-179 640.0
18 TraesCS4B01G361800 chr1B 89.370 508 50 2 1180 1686 554152983 554153487 1.790000e-178 636.0
19 TraesCS4B01G361800 chr1B 88.976 508 52 2 1180 1686 625436165 625435661 3.870000e-175 625.0
20 TraesCS4B01G361800 chr1B 87.992 508 57 2 1180 1686 670625858 670625354 8.440000e-167 597.0
21 TraesCS4B01G361800 chr1B 87.841 403 48 1 1180 1581 298765091 298765493 5.340000e-129 472.0
22 TraesCS4B01G361800 chr1B 90.400 125 12 0 1180 1304 4617926 4617802 1.010000e-36 165.0
23 TraesCS4B01G361800 chr1B 83.453 139 13 5 1739 1877 461302827 461302699 2.230000e-23 121.0
24 TraesCS4B01G361800 chr1B 88.000 50 5 1 1831 1880 105688387 105688339 1.770000e-04 58.4
25 TraesCS4B01G361800 chr7B 88.976 508 52 2 1180 1686 704165055 704165559 3.870000e-175 625.0
26 TraesCS4B01G361800 chr7B 88.780 508 53 2 1180 1686 684172484 684172988 1.800000e-173 619.0
27 TraesCS4B01G361800 chr7B 94.318 176 9 1 2193 2368 92045849 92046023 7.520000e-68 268.0
28 TraesCS4B01G361800 chr7B 96.000 50 2 0 3742 3791 329379328 329379377 1.050000e-11 82.4
29 TraesCS4B01G361800 chr2B 88.780 508 53 2 1180 1686 695759599 695760103 1.800000e-173 619.0
30 TraesCS4B01G361800 chr5B 88.780 508 52 3 1180 1686 521346406 521346909 6.480000e-173 617.0
31 TraesCS4B01G361800 chr5B 88.583 508 54 2 1180 1686 567942880 567943384 8.380000e-172 614.0
32 TraesCS4B01G361800 chr5B 90.566 106 6 4 4235 4340 689887462 689887361 2.210000e-28 137.0
33 TraesCS4B01G361800 chr5B 94.444 54 1 2 3751 3804 262565664 262565715 1.050000e-11 82.4
34 TraesCS4B01G361800 chr5B 96.000 50 2 0 3742 3791 295798713 295798664 1.050000e-11 82.4
35 TraesCS4B01G361800 chr3B 80.762 551 66 28 3017 3540 811513822 811513285 1.190000e-105 394.0
36 TraesCS4B01G361800 chr3B 94.915 177 7 2 2202 2376 571752690 571752514 4.490000e-70 276.0
37 TraesCS4B01G361800 chr3B 94.828 174 9 0 2202 2375 120617078 120616905 5.810000e-69 272.0
38 TraesCS4B01G361800 chr3B 96.000 50 2 0 3742 3791 343958756 343958707 1.050000e-11 82.4
39 TraesCS4B01G361800 chr3B 89.062 64 6 1 3728 3791 558501209 558501147 1.360000e-10 78.7
40 TraesCS4B01G361800 chr3A 82.540 441 53 16 3017 3445 734281002 734280574 2.590000e-97 366.0
41 TraesCS4B01G361800 chr3A 87.324 142 16 2 1741 1881 80279101 80278961 1.310000e-35 161.0
42 TraesCS4B01G361800 chr3A 92.784 97 2 4 4232 4323 60628533 60628629 7.960000e-28 135.0
43 TraesCS4B01G361800 chr3A 89.796 49 5 0 1831 1879 71804181 71804229 3.810000e-06 63.9
44 TraesCS4B01G361800 chr6A 89.333 225 19 1 1180 1399 439516054 439516278 1.250000e-70 278.0
45 TraesCS4B01G361800 chr6A 93.750 96 3 2 4228 4323 611065999 611066091 1.710000e-29 141.0
46 TraesCS4B01G361800 chr6A 86.957 69 6 3 3725 3791 424099050 424099117 1.760000e-09 75.0
47 TraesCS4B01G361800 chr6B 95.882 170 7 0 2203 2372 211161479 211161648 4.490000e-70 276.0
48 TraesCS4B01G361800 chr6B 90.323 62 3 3 3745 3803 669617383 669617322 1.360000e-10 78.7
49 TraesCS4B01G361800 chr1D 95.376 173 8 0 2197 2369 238940210 238940382 4.490000e-70 276.0
50 TraesCS4B01G361800 chr1D 95.858 169 7 0 2203 2371 178466306 178466474 1.620000e-69 274.0
51 TraesCS4B01G361800 chr1D 92.553 188 11 3 2185 2370 201728659 201728845 2.700000e-67 267.0
52 TraesCS4B01G361800 chr1D 89.209 139 14 1 1739 1877 343892037 343891900 6.060000e-39 172.0
53 TraesCS4B01G361800 chr6D 95.858 169 7 0 2200 2368 392897142 392896974 1.620000e-69 274.0
54 TraesCS4B01G361800 chr4A 88.496 226 21 1 1180 1400 411855057 411854832 7.520000e-68 268.0
55 TraesCS4B01G361800 chr5D 90.210 143 13 1 1738 1879 447773098 447772956 7.790000e-43 185.0
56 TraesCS4B01G361800 chr5D 91.150 113 7 3 4228 4337 490026024 490026136 2.840000e-32 150.0
57 TraesCS4B01G361800 chr5D 91.089 101 7 2 4235 4334 546684259 546684160 7.960000e-28 135.0
58 TraesCS4B01G361800 chr5D 96.154 52 0 2 3744 3793 451485937 451485886 2.920000e-12 84.2
59 TraesCS4B01G361800 chr3D 92.000 125 10 0 1180 1304 216613671 216613547 4.690000e-40 176.0
60 TraesCS4B01G361800 chr3D 86.395 147 10 2 1738 1884 565688702 565688838 7.900000e-33 152.0
61 TraesCS4B01G361800 chr2A 76.923 143 17 5 1736 1877 769555335 769555462 2.940000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G361800 chr4B 650934173 650938731 4558 False 8419.0 8419 100.0000 1 4559 1 chr4B.!!$F2 4558
1 TraesCS4B01G361800 chr4B 631973533 631974037 504 True 630.0 630 89.1730 1180 1686 1 chr4B.!!$R2 506
2 TraesCS4B01G361800 chr4D 504314553 504320732 6179 False 923.8 2124 88.2434 76 4437 5 chr4D.!!$F2 4361
3 TraesCS4B01G361800 chr5A 688961898 688967951 6053 False 714.4 1912 85.8822 1 4358 5 chr5A.!!$F2 4357
4 TraesCS4B01G361800 chr2D 632563024 632563526 502 True 640.0 640 89.5870 1180 1686 1 chr2D.!!$R1 506
5 TraesCS4B01G361800 chr1B 554152983 554153487 504 False 636.0 636 89.3700 1180 1686 1 chr1B.!!$F2 506
6 TraesCS4B01G361800 chr1B 625435661 625436165 504 True 625.0 625 88.9760 1180 1686 1 chr1B.!!$R4 506
7 TraesCS4B01G361800 chr1B 670625354 670625858 504 True 597.0 597 87.9920 1180 1686 1 chr1B.!!$R5 506
8 TraesCS4B01G361800 chr7B 704165055 704165559 504 False 625.0 625 88.9760 1180 1686 1 chr7B.!!$F4 506
9 TraesCS4B01G361800 chr7B 684172484 684172988 504 False 619.0 619 88.7800 1180 1686 1 chr7B.!!$F3 506
10 TraesCS4B01G361800 chr2B 695759599 695760103 504 False 619.0 619 88.7800 1180 1686 1 chr2B.!!$F1 506
11 TraesCS4B01G361800 chr5B 521346406 521346909 503 False 617.0 617 88.7800 1180 1686 1 chr5B.!!$F2 506
12 TraesCS4B01G361800 chr5B 567942880 567943384 504 False 614.0 614 88.5830 1180 1686 1 chr5B.!!$F3 506
13 TraesCS4B01G361800 chr3B 811513285 811513822 537 True 394.0 394 80.7620 3017 3540 1 chr3B.!!$R5 523

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
625 735 0.105593 TGAGGCATGATCTCGGCTTC 59.894 55.0 11.34 9.74 38.29 3.86 F
1027 1192 0.037605 CTAGGGTTTTCTCGCCGTGT 60.038 55.0 0.00 0.00 0.00 4.49 F
1777 2526 0.174845 CGGCTCCGTGGAATTACAGA 59.825 55.0 0.00 0.00 34.35 3.41 F
1830 2579 0.748005 TTTATCCCTGCAGCTTCGCC 60.748 55.0 8.66 0.00 0.00 5.54 F
1861 2610 1.021202 CTGAGTCTGGAGCGGAGTAG 58.979 60.0 0.00 0.00 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2390 3141 0.112995 TGGTTGAGGAAAGGCTGCAT 59.887 50.000 0.50 0.0 0.00 3.96 R
2617 3369 1.554617 ACCAAAAGCTGCACCAAAACT 59.445 42.857 1.02 0.0 0.00 2.66 R
3290 4075 0.663153 GGCGGAATGGATGTTAGTGC 59.337 55.000 0.00 0.0 0.00 4.40 R
3309 4094 2.806244 CAGTCTTTGGAACCTGTAACGG 59.194 50.000 0.00 0.0 0.00 4.44 R
3850 4655 1.068250 GAATCGAAGGAGCCCTCGG 59.932 63.158 7.60 0.0 30.89 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.444553 GTCAAGCCCGACTCGACAG 60.445 63.158 0.00 0.00 32.92 3.51
33 34 1.939838 GCCCGACTCGACAGAATTGTT 60.940 52.381 0.00 0.00 37.76 2.83
35 36 2.404215 CCGACTCGACAGAATTGTTGT 58.596 47.619 0.00 0.00 39.36 3.32
39 40 3.131396 ACTCGACAGAATTGTTGTCCAC 58.869 45.455 11.93 0.00 41.43 4.02
46 47 3.185188 CAGAATTGTTGTCCACTCACTCG 59.815 47.826 0.00 0.00 0.00 4.18
51 52 3.340034 TGTTGTCCACTCACTCGTTTTT 58.660 40.909 0.00 0.00 0.00 1.94
52 53 3.372822 TGTTGTCCACTCACTCGTTTTTC 59.627 43.478 0.00 0.00 0.00 2.29
58 59 3.377172 CCACTCACTCGTTTTTCAAAGGT 59.623 43.478 0.00 0.00 0.00 3.50
70 71 3.980646 TTCAAAGGTCCAATCAACACG 57.019 42.857 0.00 0.00 0.00 4.49
107 108 1.499438 TCGAGTCCCCATAGATCCACT 59.501 52.381 0.00 0.00 0.00 4.00
122 123 0.183731 CCACTGCCTCCCTAAATCCC 59.816 60.000 0.00 0.00 0.00 3.85
123 124 0.179045 CACTGCCTCCCTAAATCCCG 60.179 60.000 0.00 0.00 0.00 5.14
132 133 1.352352 CCCTAAATCCCGCCATCTGAT 59.648 52.381 0.00 0.00 0.00 2.90
148 149 5.701750 CCATCTGATCCACATCTCTCAAATC 59.298 44.000 0.00 0.00 0.00 2.17
154 155 2.092538 CCACATCTCTCAAATCAGGCCT 60.093 50.000 0.00 0.00 0.00 5.19
161 162 2.756760 TCTCAAATCAGGCCTCATTTGC 59.243 45.455 31.15 0.00 39.08 3.68
172 173 2.697751 GCCTCATTTGCTCCTCTCTCTA 59.302 50.000 0.00 0.00 0.00 2.43
174 175 3.960102 CCTCATTTGCTCCTCTCTCTAGT 59.040 47.826 0.00 0.00 0.00 2.57
181 182 3.118186 TGCTCCTCTCTCTAGTACCTCAC 60.118 52.174 0.00 0.00 0.00 3.51
191 192 6.722328 TCTCTAGTACCTCACTGAAATCTCA 58.278 40.000 0.00 0.00 38.24 3.27
193 194 7.338196 TCTCTAGTACCTCACTGAAATCTCAAG 59.662 40.741 0.00 0.00 38.24 3.02
205 206 5.129634 TGAAATCTCAAGTACAAAGCCACA 58.870 37.500 0.00 0.00 0.00 4.17
206 207 5.769662 TGAAATCTCAAGTACAAAGCCACAT 59.230 36.000 0.00 0.00 0.00 3.21
223 224 4.625324 GCCACATAAGTGTAGATTCACCCA 60.625 45.833 0.00 0.00 44.39 4.51
230 231 3.695060 AGTGTAGATTCACCCAGTAGTCG 59.305 47.826 0.00 0.00 38.91 4.18
255 256 1.953559 TCGTATCCCAAATCTGCTGC 58.046 50.000 0.00 0.00 0.00 5.25
257 258 0.947244 GTATCCCAAATCTGCTGCCG 59.053 55.000 0.00 0.00 0.00 5.69
291 292 2.038295 AGCCTAGCCATAGAAGCATGTC 59.962 50.000 0.00 0.00 0.00 3.06
294 295 4.649692 CCTAGCCATAGAAGCATGTCAAT 58.350 43.478 0.00 0.00 0.00 2.57
295 296 5.798132 CCTAGCCATAGAAGCATGTCAATA 58.202 41.667 0.00 0.00 0.00 1.90
304 305 6.879276 AGAAGCATGTCAATATCCATTCTG 57.121 37.500 0.00 0.00 0.00 3.02
309 310 5.221382 GCATGTCAATATCCATTCTGCCTTT 60.221 40.000 0.00 0.00 0.00 3.11
313 314 6.126507 TGTCAATATCCATTCTGCCTTTCCTA 60.127 38.462 0.00 0.00 0.00 2.94
317 318 4.222124 TCCATTCTGCCTTTCCTACTTC 57.778 45.455 0.00 0.00 0.00 3.01
318 319 3.846588 TCCATTCTGCCTTTCCTACTTCT 59.153 43.478 0.00 0.00 0.00 2.85
319 320 5.030147 TCCATTCTGCCTTTCCTACTTCTA 58.970 41.667 0.00 0.00 0.00 2.10
328 329 5.617252 CCTTTCCTACTTCTAACACAACCA 58.383 41.667 0.00 0.00 0.00 3.67
363 364 3.430333 TTTGAAAAACTCTTGACCCGC 57.570 42.857 0.00 0.00 0.00 6.13
384 385 2.348411 AATTAACTCCATCCCGCCAG 57.652 50.000 0.00 0.00 0.00 4.85
386 387 0.830648 TTAACTCCATCCCGCCAGAG 59.169 55.000 0.00 0.00 0.00 3.35
399 400 1.369091 GCCAGAGCACACCAATACCG 61.369 60.000 0.00 0.00 39.53 4.02
400 401 1.369091 CCAGAGCACACCAATACCGC 61.369 60.000 0.00 0.00 0.00 5.68
402 403 2.435938 AGCACACCAATACCGCCG 60.436 61.111 0.00 0.00 0.00 6.46
409 410 0.179092 ACCAATACCGCCGCTTCTAC 60.179 55.000 0.00 0.00 0.00 2.59
500 506 2.043980 CGCCGGCCCACAAATAACT 61.044 57.895 23.46 0.00 0.00 2.24
503 509 1.407712 GCCGGCCCACAAATAACTCTA 60.408 52.381 18.11 0.00 0.00 2.43
535 541 4.941873 GGGACAGTCCACAAATAACTAAGG 59.058 45.833 21.75 0.00 38.64 2.69
592 702 6.405278 TTTTTCTTTTTGAGGGGTGATCTC 57.595 37.500 0.00 0.00 0.00 2.75
593 703 3.334583 TCTTTTTGAGGGGTGATCTCG 57.665 47.619 0.00 0.00 34.19 4.04
594 704 1.740025 CTTTTTGAGGGGTGATCTCGC 59.260 52.381 3.39 3.39 34.19 5.03
595 705 0.690192 TTTTGAGGGGTGATCTCGCA 59.310 50.000 13.06 0.00 34.19 5.10
596 706 0.250234 TTTGAGGGGTGATCTCGCAG 59.750 55.000 13.06 0.00 34.19 5.18
601 711 1.073923 AGGGGTGATCTCGCAGTTTTT 59.926 47.619 13.06 0.00 0.00 1.94
624 734 0.543277 TTGAGGCATGATCTCGGCTT 59.457 50.000 11.34 1.09 38.29 4.35
625 735 0.105593 TGAGGCATGATCTCGGCTTC 59.894 55.000 11.34 9.74 38.29 3.86
626 736 0.943359 GAGGCATGATCTCGGCTTCG 60.943 60.000 11.34 0.00 38.29 3.79
627 737 1.958205 GGCATGATCTCGGCTTCGG 60.958 63.158 0.00 0.00 34.13 4.30
628 738 2.602322 GCATGATCTCGGCTTCGGC 61.602 63.158 0.00 0.00 40.88 5.54
667 802 1.986882 AACTGTCCAGAAAGCCCAAG 58.013 50.000 0.40 0.00 0.00 3.61
672 807 3.888930 CTGTCCAGAAAGCCCAAGTAAAA 59.111 43.478 0.00 0.00 0.00 1.52
673 808 4.282496 TGTCCAGAAAGCCCAAGTAAAAA 58.718 39.130 0.00 0.00 0.00 1.94
752 887 3.353836 GCAGGCGCCGACAAAGAA 61.354 61.111 23.20 0.00 0.00 2.52
756 891 1.082104 GGCGCCGACAAAGAAACAG 60.082 57.895 12.58 0.00 0.00 3.16
757 892 1.725973 GCGCCGACAAAGAAACAGC 60.726 57.895 0.00 0.00 0.00 4.40
945 1091 0.324091 TTCCAGGTACGAGGTCCTCC 60.324 60.000 13.54 0.00 30.91 4.30
955 1101 1.073397 AGGTCCTCCCCATCCATCC 60.073 63.158 0.00 0.00 0.00 3.51
957 1103 1.073397 GTCCTCCCCATCCATCCCT 60.073 63.158 0.00 0.00 0.00 4.20
997 1143 4.100084 TCCCGAGGGACGACGCTA 62.100 66.667 6.80 0.00 45.77 4.26
999 1145 2.823147 CCGAGGGACGACGCTACT 60.823 66.667 4.21 0.00 45.77 2.57
1002 1167 2.361357 AGGGACGACGCTACTGCT 60.361 61.111 2.08 0.00 37.53 4.24
1027 1192 0.037605 CTAGGGTTTTCTCGCCGTGT 60.038 55.000 0.00 0.00 0.00 4.49
1028 1193 1.203052 CTAGGGTTTTCTCGCCGTGTA 59.797 52.381 0.00 0.00 0.00 2.90
1029 1194 0.320160 AGGGTTTTCTCGCCGTGTAC 60.320 55.000 0.00 0.00 0.00 2.90
1030 1195 0.600782 GGGTTTTCTCGCCGTGTACA 60.601 55.000 0.00 0.00 0.00 2.90
1149 1314 1.781429 CGTCGATGTAAGAATCCAGCG 59.219 52.381 0.00 0.00 41.46 5.18
1175 1340 4.122776 CTCGCAACTTATTAGAGCCACAT 58.877 43.478 0.00 0.00 0.00 3.21
1186 1351 2.121948 AGAGCCACATGCCTTCTCATA 58.878 47.619 0.00 0.00 42.71 2.15
1221 1386 1.219522 CTGACACGGTCGTTGGTTCC 61.220 60.000 0.00 0.00 34.95 3.62
1354 1519 3.190874 GTCGACTTCTTGCCTCTATTGG 58.809 50.000 8.70 0.00 0.00 3.16
1363 1528 3.845781 TGCCTCTATTGGTTGAGATCC 57.154 47.619 0.00 0.00 32.44 3.36
1434 1604 5.555017 ACTGTCTGTCTGCATATCTGTTTT 58.445 37.500 0.00 0.00 0.00 2.43
1438 1608 6.371548 TGTCTGTCTGCATATCTGTTTTAACC 59.628 38.462 0.00 0.00 0.00 2.85
1441 1611 5.580691 TGTCTGCATATCTGTTTTAACCGAG 59.419 40.000 0.00 0.00 0.00 4.63
1475 1645 2.273908 GGAGCTGGTGTTCTCCGTA 58.726 57.895 0.00 0.00 39.43 4.02
1494 1664 3.077339 GTGCGTGCACTTGCTAAAG 57.923 52.632 17.32 0.00 43.12 1.85
1498 1669 2.293122 TGCGTGCACTTGCTAAAGAAAT 59.707 40.909 16.19 0.00 42.66 2.17
1502 1673 4.975502 CGTGCACTTGCTAAAGAAATCAAA 59.024 37.500 16.19 0.00 42.66 2.69
1505 1676 4.382754 GCACTTGCTAAAGAAATCAAACGG 59.617 41.667 0.00 0.00 36.84 4.44
1626 2373 0.463620 TGTTTTGGTGCAGCCTTTCC 59.536 50.000 14.36 0.00 38.35 3.13
1638 2385 2.301009 CAGCCTTTCCTGAAATGCCTTT 59.699 45.455 13.85 0.00 41.02 3.11
1639 2386 2.301009 AGCCTTTCCTGAAATGCCTTTG 59.699 45.455 13.85 0.00 41.02 2.77
1640 2387 2.613725 GCCTTTCCTGAAATGCCTTTGG 60.614 50.000 8.22 0.00 36.40 3.28
1735 2484 9.647797 TGAATTCACAATCGTGTAATAACTAGT 57.352 29.630 3.38 0.00 44.02 2.57
1739 2488 9.577110 TTCACAATCGTGTAATAACTAGTAAGG 57.423 33.333 0.00 0.00 44.02 2.69
1740 2489 8.192774 TCACAATCGTGTAATAACTAGTAAGGG 58.807 37.037 0.00 0.00 44.02 3.95
1741 2490 6.982724 ACAATCGTGTAATAACTAGTAAGGGC 59.017 38.462 0.00 0.00 35.72 5.19
1742 2491 5.520376 TCGTGTAATAACTAGTAAGGGCC 57.480 43.478 0.00 0.00 0.00 5.80
1743 2492 5.203528 TCGTGTAATAACTAGTAAGGGCCT 58.796 41.667 0.00 0.00 0.00 5.19
1744 2493 5.068198 TCGTGTAATAACTAGTAAGGGCCTG 59.932 44.000 6.92 0.00 0.00 4.85
1745 2494 5.163478 CGTGTAATAACTAGTAAGGGCCTGT 60.163 44.000 6.92 0.00 0.00 4.00
1746 2495 6.628844 CGTGTAATAACTAGTAAGGGCCTGTT 60.629 42.308 6.92 9.30 0.00 3.16
1747 2496 6.760298 GTGTAATAACTAGTAAGGGCCTGTTC 59.240 42.308 6.92 0.04 0.00 3.18
1748 2497 4.667519 ATAACTAGTAAGGGCCTGTTCG 57.332 45.455 6.92 0.00 0.00 3.95
1749 2498 1.192428 ACTAGTAAGGGCCTGTTCGG 58.808 55.000 6.92 0.11 0.00 4.30
1758 2507 3.668386 CCTGTTCGGCTTTCCACC 58.332 61.111 0.00 0.00 0.00 4.61
1766 2515 4.699522 GCTTTCCACCGGCTCCGT 62.700 66.667 0.00 0.00 37.81 4.69
1767 2516 2.742372 CTTTCCACCGGCTCCGTG 60.742 66.667 0.00 5.87 37.81 4.94
1768 2517 4.323477 TTTCCACCGGCTCCGTGG 62.323 66.667 17.76 17.76 39.84 4.94
1771 2520 4.096003 CCACCGGCTCCGTGGAAT 62.096 66.667 18.55 0.00 40.42 3.01
1772 2521 2.046314 CACCGGCTCCGTGGAATT 60.046 61.111 0.00 0.00 37.81 2.17
1773 2522 1.219664 CACCGGCTCCGTGGAATTA 59.780 57.895 0.00 0.00 37.81 1.40
1774 2523 1.087771 CACCGGCTCCGTGGAATTAC 61.088 60.000 0.00 0.00 37.81 1.89
1775 2524 1.219664 CCGGCTCCGTGGAATTACA 59.780 57.895 7.59 0.00 37.81 2.41
1776 2525 0.810031 CCGGCTCCGTGGAATTACAG 60.810 60.000 7.59 0.00 37.81 2.74
1777 2526 0.174845 CGGCTCCGTGGAATTACAGA 59.825 55.000 0.00 0.00 34.35 3.41
1778 2527 1.404986 CGGCTCCGTGGAATTACAGAA 60.405 52.381 0.00 0.00 34.35 3.02
1779 2528 2.741878 CGGCTCCGTGGAATTACAGAAT 60.742 50.000 0.00 0.00 34.35 2.40
1780 2529 2.872858 GGCTCCGTGGAATTACAGAATC 59.127 50.000 0.00 0.00 0.00 2.52
1781 2530 3.432326 GGCTCCGTGGAATTACAGAATCT 60.432 47.826 0.00 0.00 0.00 2.40
1782 2531 3.557595 GCTCCGTGGAATTACAGAATCTG 59.442 47.826 8.98 8.98 37.52 2.90
1783 2532 3.531538 TCCGTGGAATTACAGAATCTGC 58.468 45.455 10.62 0.00 34.37 4.26
1784 2533 3.055458 TCCGTGGAATTACAGAATCTGCA 60.055 43.478 10.62 0.00 34.37 4.41
1785 2534 3.310774 CCGTGGAATTACAGAATCTGCAG 59.689 47.826 10.62 7.63 34.37 4.41
1786 2535 4.183865 CGTGGAATTACAGAATCTGCAGA 58.816 43.478 20.79 20.79 34.37 4.26
1787 2536 4.269603 CGTGGAATTACAGAATCTGCAGAG 59.730 45.833 22.96 10.82 34.37 3.35
1788 2537 4.034975 GTGGAATTACAGAATCTGCAGAGC 59.965 45.833 22.96 16.13 34.37 4.09
1789 2538 4.194640 GGAATTACAGAATCTGCAGAGCA 58.805 43.478 22.96 0.00 34.37 4.26
1790 2539 4.034975 GGAATTACAGAATCTGCAGAGCAC 59.965 45.833 22.96 14.85 34.37 4.40
1791 2540 2.680312 TACAGAATCTGCAGAGCACC 57.320 50.000 22.96 10.50 34.37 5.01
1792 2541 0.982704 ACAGAATCTGCAGAGCACCT 59.017 50.000 22.96 12.55 34.37 4.00
1793 2542 2.182827 ACAGAATCTGCAGAGCACCTA 58.817 47.619 22.96 0.00 34.37 3.08
1794 2543 2.568956 ACAGAATCTGCAGAGCACCTAA 59.431 45.455 22.96 0.00 34.37 2.69
1795 2544 3.199508 ACAGAATCTGCAGAGCACCTAAT 59.800 43.478 22.96 0.00 34.37 1.73
1796 2545 4.197750 CAGAATCTGCAGAGCACCTAATT 58.802 43.478 22.96 8.62 33.79 1.40
1797 2546 4.639310 CAGAATCTGCAGAGCACCTAATTT 59.361 41.667 22.96 7.85 33.79 1.82
1798 2547 4.880696 AGAATCTGCAGAGCACCTAATTTC 59.119 41.667 22.96 16.21 33.79 2.17
1799 2548 2.991250 TCTGCAGAGCACCTAATTTCC 58.009 47.619 13.74 0.00 33.79 3.13
1800 2549 2.305635 TCTGCAGAGCACCTAATTTCCA 59.694 45.455 13.74 0.00 33.79 3.53
1801 2550 2.681848 CTGCAGAGCACCTAATTTCCAG 59.318 50.000 8.42 0.00 33.79 3.86
1802 2551 1.403323 GCAGAGCACCTAATTTCCAGC 59.597 52.381 0.00 0.00 0.00 4.85
1803 2552 2.943199 GCAGAGCACCTAATTTCCAGCT 60.943 50.000 0.00 0.00 34.61 4.24
1804 2553 2.941720 CAGAGCACCTAATTTCCAGCTC 59.058 50.000 12.12 12.12 46.47 4.09
1805 2554 2.293170 GAGCACCTAATTTCCAGCTCC 58.707 52.381 0.00 0.00 41.83 4.70
1806 2555 1.635487 AGCACCTAATTTCCAGCTCCA 59.365 47.619 0.00 0.00 0.00 3.86
1807 2556 1.745653 GCACCTAATTTCCAGCTCCAC 59.254 52.381 0.00 0.00 0.00 4.02
1808 2557 2.619074 GCACCTAATTTCCAGCTCCACT 60.619 50.000 0.00 0.00 0.00 4.00
1809 2558 3.370527 GCACCTAATTTCCAGCTCCACTA 60.371 47.826 0.00 0.00 0.00 2.74
1810 2559 4.687219 GCACCTAATTTCCAGCTCCACTAT 60.687 45.833 0.00 0.00 0.00 2.12
1811 2560 5.440610 CACCTAATTTCCAGCTCCACTATT 58.559 41.667 0.00 0.00 0.00 1.73
1812 2561 5.888161 CACCTAATTTCCAGCTCCACTATTT 59.112 40.000 0.00 0.00 0.00 1.40
1813 2562 6.378280 CACCTAATTTCCAGCTCCACTATTTT 59.622 38.462 0.00 0.00 0.00 1.82
1814 2563 7.556275 CACCTAATTTCCAGCTCCACTATTTTA 59.444 37.037 0.00 0.00 0.00 1.52
1815 2564 8.282256 ACCTAATTTCCAGCTCCACTATTTTAT 58.718 33.333 0.00 0.00 0.00 1.40
1816 2565 8.787852 CCTAATTTCCAGCTCCACTATTTTATC 58.212 37.037 0.00 0.00 0.00 1.75
1817 2566 7.588497 AATTTCCAGCTCCACTATTTTATCC 57.412 36.000 0.00 0.00 0.00 2.59
1818 2567 4.706842 TCCAGCTCCACTATTTTATCCC 57.293 45.455 0.00 0.00 0.00 3.85
1819 2568 4.307259 TCCAGCTCCACTATTTTATCCCT 58.693 43.478 0.00 0.00 0.00 4.20
1820 2569 4.103153 TCCAGCTCCACTATTTTATCCCTG 59.897 45.833 0.00 0.00 0.00 4.45
1821 2570 3.817647 CAGCTCCACTATTTTATCCCTGC 59.182 47.826 0.00 0.00 0.00 4.85
1822 2571 3.459598 AGCTCCACTATTTTATCCCTGCA 59.540 43.478 0.00 0.00 0.00 4.41
1823 2572 3.817647 GCTCCACTATTTTATCCCTGCAG 59.182 47.826 6.78 6.78 0.00 4.41
1824 2573 3.817647 CTCCACTATTTTATCCCTGCAGC 59.182 47.826 8.66 0.00 0.00 5.25
1825 2574 3.459598 TCCACTATTTTATCCCTGCAGCT 59.540 43.478 8.66 0.00 0.00 4.24
1826 2575 4.079787 TCCACTATTTTATCCCTGCAGCTT 60.080 41.667 8.66 0.00 0.00 3.74
1827 2576 4.276926 CCACTATTTTATCCCTGCAGCTTC 59.723 45.833 8.66 0.00 0.00 3.86
1828 2577 4.024556 CACTATTTTATCCCTGCAGCTTCG 60.025 45.833 8.66 0.00 0.00 3.79
1829 2578 1.094785 TTTTATCCCTGCAGCTTCGC 58.905 50.000 8.66 0.00 0.00 4.70
1830 2579 0.748005 TTTATCCCTGCAGCTTCGCC 60.748 55.000 8.66 0.00 0.00 5.54
1831 2580 1.909459 TTATCCCTGCAGCTTCGCCA 61.909 55.000 8.66 0.00 0.00 5.69
1832 2581 2.315781 TATCCCTGCAGCTTCGCCAG 62.316 60.000 8.66 0.00 0.00 4.85
1850 2599 2.101965 CTCCGCGAGCTGAGTCTG 59.898 66.667 8.23 0.00 0.00 3.51
1851 2600 3.408501 CTCCGCGAGCTGAGTCTGG 62.409 68.421 8.23 0.00 0.00 3.86
1852 2601 3.443925 CCGCGAGCTGAGTCTGGA 61.444 66.667 8.23 0.00 0.00 3.86
1853 2602 2.101965 CGCGAGCTGAGTCTGGAG 59.898 66.667 0.00 0.00 0.00 3.86
1854 2603 2.202730 GCGAGCTGAGTCTGGAGC 60.203 66.667 0.00 0.00 35.28 4.70
1855 2604 2.101965 CGAGCTGAGTCTGGAGCG 59.898 66.667 0.00 0.00 40.34 5.03
1856 2605 2.493973 GAGCTGAGTCTGGAGCGG 59.506 66.667 0.00 0.00 40.34 5.52
1857 2606 2.036414 AGCTGAGTCTGGAGCGGA 59.964 61.111 0.00 0.00 40.34 5.54
1858 2607 2.003658 GAGCTGAGTCTGGAGCGGAG 62.004 65.000 0.00 0.00 40.34 4.63
1859 2608 2.347322 GCTGAGTCTGGAGCGGAGT 61.347 63.158 0.00 0.00 0.00 3.85
1860 2609 1.032657 GCTGAGTCTGGAGCGGAGTA 61.033 60.000 0.00 0.00 0.00 2.59
1861 2610 1.021202 CTGAGTCTGGAGCGGAGTAG 58.979 60.000 0.00 0.00 0.00 2.57
1862 2611 1.032657 TGAGTCTGGAGCGGAGTAGC 61.033 60.000 0.00 0.00 37.41 3.58
1875 2624 2.388310 GAGTAGCTCCAAACACTCCC 57.612 55.000 0.00 0.00 32.93 4.30
1883 2632 3.621715 GCTCCAAACACTCCCTAAATACG 59.378 47.826 0.00 0.00 0.00 3.06
1895 2644 5.914033 TCCCTAAATACGATGGTTTCTCTG 58.086 41.667 0.00 0.00 0.00 3.35
1898 2647 5.760253 CCTAAATACGATGGTTTCTCTGCAT 59.240 40.000 0.00 0.00 0.00 3.96
1925 2675 3.992643 TGTCAATCAATTGCCCTTTGTG 58.007 40.909 0.00 0.00 37.68 3.33
1930 2680 1.962807 TCAATTGCCCTTTGTGACAGG 59.037 47.619 0.00 0.00 0.00 4.00
1945 2695 3.499918 GTGACAGGATTGTCCTCTTTGTG 59.500 47.826 5.33 0.00 45.66 3.33
1968 2718 4.431086 GCTGCAAAGTTAAACGCAATAACG 60.431 41.667 0.00 0.00 38.11 3.18
2002 2752 5.803461 TGAGTAATTAACCATCTCGTTGTCG 59.197 40.000 0.00 0.00 38.55 4.35
2027 2777 4.331168 AGATTTTAGCTCGCTTGATGTGAC 59.669 41.667 0.00 0.00 0.00 3.67
2047 2797 6.934083 TGTGACTATGATTGCAAGTAAACTGA 59.066 34.615 4.94 0.00 0.00 3.41
2077 2827 8.712285 TTTCTTCTACTCCGTAACAAATATGG 57.288 34.615 0.00 0.00 41.42 2.74
2099 2850 7.303634 TGGAAAAACTAGATTTCTATGCGAC 57.696 36.000 18.46 7.07 37.06 5.19
2188 2939 7.623089 GCTCTCTTAGTACTGCAAAGTTCAATG 60.623 40.741 5.39 0.00 0.00 2.82
2196 2947 4.587584 TGCAAAGTTCAATGCATCTTCA 57.412 36.364 0.00 0.00 46.87 3.02
2204 2955 9.793252 AAAGTTCAATGCATCTTCATGTAATAC 57.207 29.630 0.00 0.00 31.86 1.89
2205 2956 8.743085 AGTTCAATGCATCTTCATGTAATACT 57.257 30.769 0.00 0.00 31.86 2.12
2206 2957 8.834465 AGTTCAATGCATCTTCATGTAATACTC 58.166 33.333 0.00 0.00 31.86 2.59
2207 2958 7.734924 TCAATGCATCTTCATGTAATACTCC 57.265 36.000 0.00 0.00 31.86 3.85
2208 2959 6.712095 TCAATGCATCTTCATGTAATACTCCC 59.288 38.462 0.00 0.00 31.86 4.30
2209 2960 4.631131 TGCATCTTCATGTAATACTCCCG 58.369 43.478 0.00 0.00 31.86 5.14
2210 2961 3.433615 GCATCTTCATGTAATACTCCCGC 59.566 47.826 0.00 0.00 31.86 6.13
2211 2962 4.800914 GCATCTTCATGTAATACTCCCGCT 60.801 45.833 0.00 0.00 31.86 5.52
2212 2963 4.322080 TCTTCATGTAATACTCCCGCTG 57.678 45.455 0.00 0.00 0.00 5.18
2213 2964 3.704566 TCTTCATGTAATACTCCCGCTGT 59.295 43.478 0.00 0.00 0.00 4.40
2214 2965 4.161565 TCTTCATGTAATACTCCCGCTGTT 59.838 41.667 0.00 0.00 0.00 3.16
2215 2966 4.054780 TCATGTAATACTCCCGCTGTTC 57.945 45.455 0.00 0.00 0.00 3.18
2216 2967 2.973694 TGTAATACTCCCGCTGTTCC 57.026 50.000 0.00 0.00 0.00 3.62
2217 2968 2.463752 TGTAATACTCCCGCTGTTCCT 58.536 47.619 0.00 0.00 0.00 3.36
2218 2969 3.634504 TGTAATACTCCCGCTGTTCCTA 58.365 45.455 0.00 0.00 0.00 2.94
2219 2970 4.025360 TGTAATACTCCCGCTGTTCCTAA 58.975 43.478 0.00 0.00 0.00 2.69
2220 2971 4.467082 TGTAATACTCCCGCTGTTCCTAAA 59.533 41.667 0.00 0.00 0.00 1.85
2221 2972 4.772886 AATACTCCCGCTGTTCCTAAAT 57.227 40.909 0.00 0.00 0.00 1.40
2222 2973 5.881923 AATACTCCCGCTGTTCCTAAATA 57.118 39.130 0.00 0.00 0.00 1.40
2223 2974 6.435292 AATACTCCCGCTGTTCCTAAATAT 57.565 37.500 0.00 0.00 0.00 1.28
2224 2975 4.772886 ACTCCCGCTGTTCCTAAATATT 57.227 40.909 0.00 0.00 0.00 1.28
2225 2976 5.112129 ACTCCCGCTGTTCCTAAATATTT 57.888 39.130 5.89 5.89 0.00 1.40
2226 2977 4.881850 ACTCCCGCTGTTCCTAAATATTTG 59.118 41.667 11.05 1.40 0.00 2.32
2227 2978 4.850680 TCCCGCTGTTCCTAAATATTTGT 58.149 39.130 11.05 0.00 0.00 2.83
2228 2979 4.879545 TCCCGCTGTTCCTAAATATTTGTC 59.120 41.667 11.05 0.00 0.00 3.18
2229 2980 4.881850 CCCGCTGTTCCTAAATATTTGTCT 59.118 41.667 11.05 0.00 0.00 3.41
2230 2981 5.357032 CCCGCTGTTCCTAAATATTTGTCTT 59.643 40.000 11.05 0.00 0.00 3.01
2231 2982 6.127730 CCCGCTGTTCCTAAATATTTGTCTTT 60.128 38.462 11.05 0.00 0.00 2.52
2232 2983 7.312899 CCGCTGTTCCTAAATATTTGTCTTTT 58.687 34.615 11.05 0.00 0.00 2.27
2233 2984 7.812669 CCGCTGTTCCTAAATATTTGTCTTTTT 59.187 33.333 11.05 0.00 0.00 1.94
2234 2985 9.834628 CGCTGTTCCTAAATATTTGTCTTTTTA 57.165 29.630 11.05 0.00 0.00 1.52
2250 3001 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
2251 3002 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
2305 3056 8.709386 TTAGAGACTAGATTCACTCATTTTGC 57.291 34.615 0.00 0.00 32.59 3.68
2306 3057 6.945218 AGAGACTAGATTCACTCATTTTGCT 58.055 36.000 0.00 0.00 32.59 3.91
2307 3058 7.041107 AGAGACTAGATTCACTCATTTTGCTC 58.959 38.462 0.00 0.00 32.59 4.26
2308 3059 6.112058 AGACTAGATTCACTCATTTTGCTCC 58.888 40.000 0.00 0.00 0.00 4.70
2309 3060 4.872691 ACTAGATTCACTCATTTTGCTCCG 59.127 41.667 0.00 0.00 0.00 4.63
2310 3061 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2311 3062 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2312 3063 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2313 3064 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2314 3065 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2315 3066 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2316 3067 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2317 3068 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2318 3069 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2319 3070 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
2320 3071 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
2321 3072 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
2322 3073 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
2323 3074 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
2324 3075 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
2325 3076 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
2326 3077 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
2327 3078 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
2328 3079 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
2329 3080 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
2330 3081 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
2331 3082 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
2332 3083 6.183360 CCGTATGTAGTCACTTGTTGAAATCC 60.183 42.308 0.00 0.00 35.39 3.01
2333 3084 6.183360 CGTATGTAGTCACTTGTTGAAATCCC 60.183 42.308 0.00 0.00 35.39 3.85
2334 3085 5.304686 TGTAGTCACTTGTTGAAATCCCT 57.695 39.130 0.00 0.00 35.39 4.20
2335 3086 6.428083 TGTAGTCACTTGTTGAAATCCCTA 57.572 37.500 0.00 0.00 35.39 3.53
2336 3087 6.464222 TGTAGTCACTTGTTGAAATCCCTAG 58.536 40.000 0.00 0.00 35.39 3.02
2337 3088 5.825593 AGTCACTTGTTGAAATCCCTAGA 57.174 39.130 0.00 0.00 35.39 2.43
2338 3089 6.187727 AGTCACTTGTTGAAATCCCTAGAA 57.812 37.500 0.00 0.00 35.39 2.10
2339 3090 6.601332 AGTCACTTGTTGAAATCCCTAGAAA 58.399 36.000 0.00 0.00 35.39 2.52
2340 3091 6.712547 AGTCACTTGTTGAAATCCCTAGAAAG 59.287 38.462 0.00 0.00 35.39 2.62
2341 3092 6.710744 GTCACTTGTTGAAATCCCTAGAAAGA 59.289 38.462 0.00 0.00 35.39 2.52
2342 3093 6.710744 TCACTTGTTGAAATCCCTAGAAAGAC 59.289 38.462 0.00 0.00 0.00 3.01
2343 3094 6.486657 CACTTGTTGAAATCCCTAGAAAGACA 59.513 38.462 0.00 0.00 0.00 3.41
2344 3095 7.013274 CACTTGTTGAAATCCCTAGAAAGACAA 59.987 37.037 0.00 0.00 0.00 3.18
2345 3096 7.559897 ACTTGTTGAAATCCCTAGAAAGACAAA 59.440 33.333 0.00 0.00 0.00 2.83
2346 3097 8.477419 TTGTTGAAATCCCTAGAAAGACAAAT 57.523 30.769 0.00 0.00 0.00 2.32
2347 3098 9.581289 TTGTTGAAATCCCTAGAAAGACAAATA 57.419 29.630 0.00 0.00 0.00 1.40
2348 3099 9.753674 TGTTGAAATCCCTAGAAAGACAAATAT 57.246 29.630 0.00 0.00 0.00 1.28
2356 3107 9.901172 TCCCTAGAAAGACAAATATTTAGGAAC 57.099 33.333 9.87 0.00 0.00 3.62
2357 3108 8.827677 CCCTAGAAAGACAAATATTTAGGAACG 58.172 37.037 9.87 0.00 0.00 3.95
2358 3109 8.827677 CCTAGAAAGACAAATATTTAGGAACGG 58.172 37.037 0.00 0.00 0.00 4.44
2359 3110 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
2360 3111 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
2361 3112 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
2362 3113 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2363 3114 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2364 3115 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
2365 3116 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
2366 3117 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
2367 3118 7.072076 ACAAATATTTAGGAACGGAGGGAGTAT 59.928 37.037 0.00 0.00 0.00 2.12
2377 3128 6.210984 GGAACGGAGGGAGTATATGAGTAAAT 59.789 42.308 0.00 0.00 0.00 1.40
2407 3158 1.251251 ACATGCAGCCTTTCCTCAAC 58.749 50.000 0.00 0.00 0.00 3.18
2434 3185 4.014406 CACCTTTGGTAATAGTGTTCCCC 58.986 47.826 0.00 0.00 32.11 4.81
2461 3212 3.731652 TGCTGCAAAGTTAAATGCACT 57.268 38.095 0.00 0.00 46.87 4.40
2468 3219 5.976534 TGCAAAGTTAAATGCACTAACACAG 59.023 36.000 18.13 10.43 46.87 3.66
2503 3254 4.592942 AGATTTTAGCTTGCCTGATGTGA 58.407 39.130 0.00 0.00 0.00 3.58
2570 3322 5.049267 GCAACAAATACGGGAAAAGTAGACA 60.049 40.000 0.00 0.00 0.00 3.41
2575 3327 8.316214 ACAAATACGGGAAAAGTAGACATCTAA 58.684 33.333 0.00 0.00 0.00 2.10
2635 3387 3.742369 CCATAGTTTTGGTGCAGCTTTTG 59.258 43.478 18.08 5.24 31.74 2.44
2637 3389 1.554617 AGTTTTGGTGCAGCTTTTGGT 59.445 42.857 18.08 0.00 0.00 3.67
2650 3402 2.036346 GCTTTTGGTGAGATGCCTTTGT 59.964 45.455 0.00 0.00 0.00 2.83
2751 3503 2.237143 CCTCTCATCAGTTGCCCTTGTA 59.763 50.000 0.00 0.00 0.00 2.41
2839 3591 3.561725 AGTTTCTCTGCTCCTTTTTGTCG 59.438 43.478 0.00 0.00 0.00 4.35
2860 3612 3.356290 GGTCAATTGCCCTCTGTAACAT 58.644 45.455 0.00 0.00 0.00 2.71
2863 3615 4.458989 GTCAATTGCCCTCTGTAACATTGA 59.541 41.667 0.00 0.00 0.00 2.57
2865 3617 3.500448 TTGCCCTCTGTAACATTGACA 57.500 42.857 0.00 0.00 0.00 3.58
3230 4006 2.224161 GGAGATGTGGACTGAGGTATGC 60.224 54.545 0.00 0.00 0.00 3.14
3231 4007 1.410517 AGATGTGGACTGAGGTATGCG 59.589 52.381 0.00 0.00 0.00 4.73
3290 4075 2.480037 TCTTGTCTTGTATTGCTGCGTG 59.520 45.455 0.00 0.00 0.00 5.34
3309 4094 0.663153 GCACTAACATCCATTCCGCC 59.337 55.000 0.00 0.00 0.00 6.13
3518 4316 1.139654 CGAATGCTCTGGATCAGGGAA 59.860 52.381 0.00 0.00 32.95 3.97
3589 4389 2.076863 GTGCTGTGGTCTGGATGTTAC 58.923 52.381 0.00 0.00 0.00 2.50
3667 4472 4.281688 TCGGATCATCAATATGTCTGCTGA 59.718 41.667 0.00 0.00 34.50 4.26
3752 4557 3.739300 CCCATTCCGTCGTATTGTGATAC 59.261 47.826 0.00 0.00 35.76 2.24
3753 4558 4.500887 CCCATTCCGTCGTATTGTGATACT 60.501 45.833 0.00 0.00 36.74 2.12
3754 4559 4.680110 CCATTCCGTCGTATTGTGATACTC 59.320 45.833 0.00 0.00 36.74 2.59
3755 4560 3.976793 TCCGTCGTATTGTGATACTCC 57.023 47.619 0.00 0.00 36.74 3.85
3756 4561 2.620115 TCCGTCGTATTGTGATACTCCC 59.380 50.000 0.00 0.00 36.74 4.30
3758 4563 3.304525 CCGTCGTATTGTGATACTCCCTC 60.305 52.174 0.00 0.00 36.74 4.30
3759 4564 3.304525 CGTCGTATTGTGATACTCCCTCC 60.305 52.174 0.00 0.00 36.74 4.30
3760 4565 2.882761 TCGTATTGTGATACTCCCTCCG 59.117 50.000 0.00 0.00 36.74 4.63
3761 4566 2.621998 CGTATTGTGATACTCCCTCCGT 59.378 50.000 0.00 0.00 36.74 4.69
3762 4567 3.067742 CGTATTGTGATACTCCCTCCGTT 59.932 47.826 0.00 0.00 36.74 4.44
3763 4568 3.821421 ATTGTGATACTCCCTCCGTTC 57.179 47.619 0.00 0.00 0.00 3.95
3764 4569 1.481871 TGTGATACTCCCTCCGTTCC 58.518 55.000 0.00 0.00 0.00 3.62
3765 4570 1.272816 TGTGATACTCCCTCCGTTCCA 60.273 52.381 0.00 0.00 0.00 3.53
3766 4571 1.829222 GTGATACTCCCTCCGTTCCAA 59.171 52.381 0.00 0.00 0.00 3.53
3767 4572 2.235402 GTGATACTCCCTCCGTTCCAAA 59.765 50.000 0.00 0.00 0.00 3.28
3768 4573 2.907696 TGATACTCCCTCCGTTCCAAAA 59.092 45.455 0.00 0.00 0.00 2.44
3769 4574 3.521937 TGATACTCCCTCCGTTCCAAAAT 59.478 43.478 0.00 0.00 0.00 1.82
3770 4575 4.717778 TGATACTCCCTCCGTTCCAAAATA 59.282 41.667 0.00 0.00 0.00 1.40
3771 4576 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
3772 4577 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
3773 4578 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
3774 4579 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
3775 4580 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
3776 4581 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
3777 4582 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
3778 4583 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
3779 4584 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
3780 4585 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
3781 4586 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
3782 4587 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
3783 4588 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
3784 4589 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
3785 4590 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
3786 4591 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
3787 4592 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
3788 4593 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
3789 4594 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
3838 4643 3.161866 TCCATTTGCCTGGTACCTTTTC 58.838 45.455 14.36 0.39 37.57 2.29
3850 4655 6.183360 CCTGGTACCTTTTCGATGTCAAATAC 60.183 42.308 14.36 0.00 0.00 1.89
3865 4830 0.396695 AATACCGAGGGCTCCTTCGA 60.397 55.000 19.96 3.46 31.76 3.71
3879 4855 3.009723 TCCTTCGATTCACAGGATTTGC 58.990 45.455 0.00 0.00 31.33 3.68
3906 4882 8.728596 TCCTTGGGGATATTTTTCAGTTTAAA 57.271 30.769 0.00 0.00 36.57 1.52
3931 4913 8.757982 ATCAGGAGTCATTTGCACTATATTTT 57.242 30.769 0.00 0.00 0.00 1.82
3971 4953 1.525619 CTCAAACCGTGGAGTTCGTTC 59.474 52.381 0.00 0.00 0.00 3.95
3974 4956 3.110178 CCGTGGAGTTCGTTCGCC 61.110 66.667 0.00 0.00 0.00 5.54
3975 4957 2.049433 CGTGGAGTTCGTTCGCCT 60.049 61.111 4.55 0.00 0.00 5.52
3980 4962 0.942252 GGAGTTCGTTCGCCTTTGTT 59.058 50.000 0.00 0.00 0.00 2.83
3981 4963 1.333791 GGAGTTCGTTCGCCTTTGTTG 60.334 52.381 0.00 0.00 0.00 3.33
3984 4966 0.378962 TTCGTTCGCCTTTGTTGTGG 59.621 50.000 0.00 0.00 0.00 4.17
3999 4981 6.371809 TTGTTGTGGTATCAAACACTCTTC 57.628 37.500 4.02 0.00 38.39 2.87
4021 5005 5.376625 TCTGCACAAATTTCTCTTACAGGT 58.623 37.500 0.00 0.00 0.00 4.00
4026 5010 7.230510 TGCACAAATTTCTCTTACAGGTTACAT 59.769 33.333 0.00 0.00 0.00 2.29
4068 5085 7.105241 ACCTTTTTCTATGAATCAATGAGGC 57.895 36.000 0.00 0.00 0.00 4.70
4075 5092 7.239763 TCTATGAATCAATGAGGCCGTATAA 57.760 36.000 0.00 0.00 0.00 0.98
4088 5105 4.527427 AGGCCGTATAATCTAAGGAGGAAC 59.473 45.833 0.00 0.00 0.00 3.62
4090 5107 5.011840 GGCCGTATAATCTAAGGAGGAACTT 59.988 44.000 0.00 0.00 41.55 2.66
4092 5109 6.990939 GCCGTATAATCTAAGGAGGAACTTTT 59.009 38.462 0.00 0.00 41.55 2.27
4093 5110 7.498239 GCCGTATAATCTAAGGAGGAACTTTTT 59.502 37.037 0.00 0.00 41.55 1.94
4174 5223 2.356665 TGGCCTAAACAGTGAAGCAA 57.643 45.000 3.32 0.00 0.00 3.91
4188 5237 4.222145 AGTGAAGCAAGGAAATCAATGCAT 59.778 37.500 0.00 0.00 41.18 3.96
4189 5238 5.419788 AGTGAAGCAAGGAAATCAATGCATA 59.580 36.000 0.00 0.00 41.18 3.14
4192 5241 5.769484 AGCAAGGAAATCAATGCATAGAG 57.231 39.130 0.00 0.00 41.18 2.43
4193 5242 5.198965 AGCAAGGAAATCAATGCATAGAGT 58.801 37.500 0.00 0.00 41.18 3.24
4194 5243 5.655532 AGCAAGGAAATCAATGCATAGAGTT 59.344 36.000 0.00 0.00 41.18 3.01
4196 5245 6.255020 GCAAGGAAATCAATGCATAGAGTTTG 59.745 38.462 0.00 0.00 38.63 2.93
4201 5250 7.594015 GGAAATCAATGCATAGAGTTTGCTATG 59.406 37.037 0.00 0.00 46.66 2.23
4206 5255 9.428097 TCAATGCATAGAGTTTGCTATGTATAG 57.572 33.333 12.93 0.00 46.51 1.31
4207 5256 9.428097 CAATGCATAGAGTTTGCTATGTATAGA 57.572 33.333 12.93 0.00 46.51 1.98
4209 5258 7.378966 TGCATAGAGTTTGCTATGTATAGACC 58.621 38.462 11.64 0.00 46.00 3.85
4210 5259 7.015195 TGCATAGAGTTTGCTATGTATAGACCA 59.985 37.037 11.64 0.00 46.00 4.02
4214 5263 8.668510 AGAGTTTGCTATGTATAGACCAAATG 57.331 34.615 3.15 0.00 30.60 2.32
4221 5270 6.294120 GCTATGTATAGACCAAATGCATGCAA 60.294 38.462 26.68 8.49 32.77 4.08
4222 5271 5.247507 TGTATAGACCAAATGCATGCAAC 57.752 39.130 26.68 14.35 0.00 4.17
4225 5274 1.001181 AGACCAAATGCATGCAACCAC 59.999 47.619 26.68 13.73 0.00 4.16
4226 5275 1.001181 GACCAAATGCATGCAACCACT 59.999 47.619 26.68 4.34 0.00 4.00
4313 5362 1.606601 GGTTGGGCCCTTCAGTTCC 60.607 63.158 25.70 10.63 0.00 3.62
4314 5363 1.606601 GTTGGGCCCTTCAGTTCCC 60.607 63.158 25.70 0.00 39.22 3.97
4315 5364 2.852281 TTGGGCCCTTCAGTTCCCC 61.852 63.158 25.70 0.00 37.97 4.81
4317 5366 2.548547 GGGCCCTTCAGTTCCCCTT 61.549 63.158 17.04 0.00 32.60 3.95
4318 5367 1.465172 GGCCCTTCAGTTCCCCTTT 59.535 57.895 0.00 0.00 0.00 3.11
4319 5368 0.178932 GGCCCTTCAGTTCCCCTTTT 60.179 55.000 0.00 0.00 0.00 2.27
4320 5369 1.717032 GCCCTTCAGTTCCCCTTTTT 58.283 50.000 0.00 0.00 0.00 1.94
4357 5406 7.687005 TTTTCAAAGTTTGCCACGTTATTAG 57.313 32.000 10.90 0.00 0.00 1.73
4361 5410 4.010667 AGTTTGCCACGTTATTAGACCA 57.989 40.909 0.00 0.00 0.00 4.02
4364 5413 6.354130 AGTTTGCCACGTTATTAGACCATAT 58.646 36.000 0.00 0.00 0.00 1.78
4366 5415 7.988599 AGTTTGCCACGTTATTAGACCATATTA 59.011 33.333 0.00 0.00 0.00 0.98
4369 5418 9.999660 TTGCCACGTTATTAGACCATATTATTA 57.000 29.630 0.00 0.00 0.00 0.98
4407 5526 5.723672 ATGTAGTTCCCAGTGGATATACG 57.276 43.478 11.95 0.00 41.40 3.06
4410 5529 2.090943 AGTTCCCAGTGGATATACGGGA 60.091 50.000 11.95 0.00 41.40 5.14
4411 5530 2.005370 TCCCAGTGGATATACGGGAC 57.995 55.000 11.95 0.00 38.03 4.46
4420 5540 5.104693 AGTGGATATACGGGACAAAACATGA 60.105 40.000 0.00 0.00 0.00 3.07
4424 5544 0.251165 ACGGGACAAAACATGAGGGG 60.251 55.000 0.00 0.00 0.00 4.79
4434 5555 1.458209 CATGAGGGGCCCAATTCCC 60.458 63.158 27.72 4.38 43.46 3.97
4441 5562 1.337384 GGGCCCAATTCCCAATGGAC 61.337 60.000 19.95 0.00 41.57 4.02
4450 5571 4.879295 ATTCCCAATGGACATACAGGAA 57.121 40.909 0.00 10.92 41.57 3.36
4538 5678 4.162888 TGATGAGACTAATGACCATGCACT 59.837 41.667 0.00 0.00 0.00 4.40
4547 5687 2.914059 TGACCATGCACTGATGAGATG 58.086 47.619 0.00 0.00 0.00 2.90
4549 5689 3.132160 GACCATGCACTGATGAGATGAG 58.868 50.000 0.00 0.00 0.00 2.90
4553 5693 0.534652 GCACTGATGAGATGAGGGCC 60.535 60.000 0.00 0.00 36.89 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.435059 GAGTCGGGCTTGACAGGC 60.435 66.667 0.00 0.00 45.20 4.85
17 18 3.184581 GTGGACAACAATTCTGTCGAGTC 59.815 47.826 9.89 0.00 43.45 3.36
26 27 3.131396 ACGAGTGAGTGGACAACAATTC 58.869 45.455 0.00 0.00 0.00 2.17
33 34 3.254470 TGAAAAACGAGTGAGTGGACA 57.746 42.857 0.00 0.00 0.00 4.02
35 36 3.625764 CCTTTGAAAAACGAGTGAGTGGA 59.374 43.478 0.00 0.00 0.00 4.02
39 40 3.625764 TGGACCTTTGAAAAACGAGTGAG 59.374 43.478 0.00 0.00 0.00 3.51
46 47 5.005299 CGTGTTGATTGGACCTTTGAAAAAC 59.995 40.000 0.00 0.00 0.00 2.43
51 52 3.201353 TCGTGTTGATTGGACCTTTGA 57.799 42.857 0.00 0.00 0.00 2.69
52 53 3.980646 TTCGTGTTGATTGGACCTTTG 57.019 42.857 0.00 0.00 0.00 2.77
95 96 0.689623 GGGAGGCAGTGGATCTATGG 59.310 60.000 0.00 0.00 0.00 2.74
107 108 2.752807 GGCGGGATTTAGGGAGGCA 61.753 63.158 0.00 0.00 0.00 4.75
122 123 1.343789 AGAGATGTGGATCAGATGGCG 59.656 52.381 0.00 0.00 0.00 5.69
123 124 2.367894 TGAGAGATGTGGATCAGATGGC 59.632 50.000 0.00 0.00 0.00 4.40
132 133 2.092753 GGCCTGATTTGAGAGATGTGGA 60.093 50.000 0.00 0.00 0.00 4.02
148 149 0.255318 AGAGGAGCAAATGAGGCCTG 59.745 55.000 12.00 0.00 0.00 4.85
154 155 4.890581 GGTACTAGAGAGAGGAGCAAATGA 59.109 45.833 0.00 0.00 0.00 2.57
161 162 4.407621 TCAGTGAGGTACTAGAGAGAGGAG 59.592 50.000 0.00 0.00 41.55 3.69
172 173 6.493802 TGTACTTGAGATTTCAGTGAGGTACT 59.506 38.462 0.00 0.00 41.36 2.73
174 175 6.911250 TGTACTTGAGATTTCAGTGAGGTA 57.089 37.500 0.00 0.00 34.15 3.08
181 182 5.239306 TGTGGCTTTGTACTTGAGATTTCAG 59.761 40.000 0.00 0.00 34.15 3.02
205 206 6.039493 CGACTACTGGGTGAATCTACACTTAT 59.961 42.308 0.00 0.00 40.22 1.73
206 207 5.356190 CGACTACTGGGTGAATCTACACTTA 59.644 44.000 0.00 0.00 40.22 2.24
230 231 3.070018 CAGATTTGGGATACGATGGCTC 58.930 50.000 0.00 0.00 37.60 4.70
240 241 0.034186 TTCGGCAGCAGATTTGGGAT 60.034 50.000 0.00 0.00 0.00 3.85
275 276 5.221986 TGGATATTGACATGCTTCTATGGCT 60.222 40.000 0.00 0.00 36.99 4.75
291 292 6.302269 AGTAGGAAAGGCAGAATGGATATTG 58.698 40.000 0.00 0.00 35.86 1.90
294 295 5.667626 AGAAGTAGGAAAGGCAGAATGGATA 59.332 40.000 0.00 0.00 35.86 2.59
295 296 4.476479 AGAAGTAGGAAAGGCAGAATGGAT 59.524 41.667 0.00 0.00 35.86 3.41
304 305 4.454847 GGTTGTGTTAGAAGTAGGAAAGGC 59.545 45.833 0.00 0.00 0.00 4.35
309 310 5.305902 TGATGTGGTTGTGTTAGAAGTAGGA 59.694 40.000 0.00 0.00 0.00 2.94
313 314 5.036117 ACTGATGTGGTTGTGTTAGAAGT 57.964 39.130 0.00 0.00 0.00 3.01
317 318 5.801350 CCATACTGATGTGGTTGTGTTAG 57.199 43.478 0.00 0.00 32.49 2.34
363 364 2.358898 CTGGCGGGATGGAGTTAATTTG 59.641 50.000 0.00 0.00 0.00 2.32
384 385 2.461110 CGGCGGTATTGGTGTGCTC 61.461 63.158 0.00 0.00 0.00 4.26
386 387 4.174129 GCGGCGGTATTGGTGTGC 62.174 66.667 9.78 0.00 0.00 4.57
500 506 3.913799 TGGACTGTCCCCTCAAAAATAGA 59.086 43.478 23.42 0.00 35.03 1.98
503 509 2.176798 TGTGGACTGTCCCCTCAAAAAT 59.823 45.455 23.42 0.00 35.03 1.82
578 688 0.904865 ACTGCGAGATCACCCCTCAA 60.905 55.000 0.00 0.00 0.00 3.02
579 689 0.904865 AACTGCGAGATCACCCCTCA 60.905 55.000 0.00 0.00 0.00 3.86
581 691 0.693049 AAAACTGCGAGATCACCCCT 59.307 50.000 0.00 0.00 0.00 4.79
582 692 1.534729 AAAAACTGCGAGATCACCCC 58.465 50.000 0.00 0.00 0.00 4.95
611 721 3.635204 GCCGAAGCCGAGATCATG 58.365 61.111 0.00 0.00 38.22 3.07
641 776 3.384789 GGCTTTCTGGACAGTTTTTCCTT 59.615 43.478 0.00 0.00 33.84 3.36
642 777 2.959030 GGCTTTCTGGACAGTTTTTCCT 59.041 45.455 0.00 0.00 33.84 3.36
687 822 1.799181 CGAAGACACGGGTAGCATGAG 60.799 57.143 0.00 0.00 0.00 2.90
689 824 2.665777 CGAAGACACGGGTAGCATG 58.334 57.895 0.00 0.00 0.00 4.06
737 872 1.507141 CTGTTTCTTTGTCGGCGCCT 61.507 55.000 26.68 0.00 0.00 5.52
746 881 2.639751 CTTCGTTCCGCTGTTTCTTTG 58.360 47.619 0.00 0.00 0.00 2.77
747 882 1.002792 GCTTCGTTCCGCTGTTTCTTT 60.003 47.619 0.00 0.00 0.00 2.52
748 883 0.586802 GCTTCGTTCCGCTGTTTCTT 59.413 50.000 0.00 0.00 0.00 2.52
749 884 1.228657 GGCTTCGTTCCGCTGTTTCT 61.229 55.000 0.00 0.00 0.00 2.52
750 885 1.206831 GGCTTCGTTCCGCTGTTTC 59.793 57.895 0.00 0.00 0.00 2.78
751 886 2.258726 GGGCTTCGTTCCGCTGTTT 61.259 57.895 0.00 0.00 0.00 2.83
752 887 2.668550 GGGCTTCGTTCCGCTGTT 60.669 61.111 0.00 0.00 0.00 3.16
756 891 3.423154 CTGTGGGCTTCGTTCCGC 61.423 66.667 0.00 0.00 0.00 5.54
757 892 2.742372 CCTGTGGGCTTCGTTCCG 60.742 66.667 0.00 0.00 0.00 4.30
928 1074 1.757340 GGGAGGACCTCGTACCTGG 60.757 68.421 15.46 0.00 36.57 4.45
945 1091 1.067762 TGGGCTAAGGGATGGATGGG 61.068 60.000 0.00 0.00 0.00 4.00
955 1101 4.176752 GGCGGGACTGGGCTAAGG 62.177 72.222 0.00 0.00 0.00 2.69
957 1103 3.081409 GAGGCGGGACTGGGCTAA 61.081 66.667 0.00 0.00 40.78 3.09
1027 1192 0.741326 GCGGCAGTGAGAGATCTGTA 59.259 55.000 0.00 0.00 34.57 2.74
1028 1193 1.515020 GCGGCAGTGAGAGATCTGT 59.485 57.895 0.00 0.00 34.57 3.41
1029 1194 1.227205 GGCGGCAGTGAGAGATCTG 60.227 63.158 0.00 0.00 35.12 2.90
1030 1195 2.780094 CGGCGGCAGTGAGAGATCT 61.780 63.158 10.53 0.00 0.00 2.75
1059 1224 3.414700 GACCTGCGCACGGAACAG 61.415 66.667 26.07 8.08 0.00 3.16
1175 1340 2.202878 GCGGCGTATGAGAAGGCA 60.203 61.111 9.37 0.00 32.06 4.75
1186 1351 4.379243 AGTAAGCTGCTGCGGCGT 62.379 61.111 26.16 25.20 45.42 5.68
1221 1386 1.469917 CTGCAAGCAACACAAAGACG 58.530 50.000 0.00 0.00 0.00 4.18
1279 1444 1.941294 CTGAGCATGAGAATGGACAGC 59.059 52.381 0.00 0.00 0.00 4.40
1282 1447 0.935898 CGCTGAGCATGAGAATGGAC 59.064 55.000 4.88 0.00 0.00 4.02
1354 1519 2.698855 TGCTAAGCTGGGATCTCAAC 57.301 50.000 0.00 0.00 0.00 3.18
1363 1528 0.106819 ATCTGCCCTTGCTAAGCTGG 60.107 55.000 0.00 0.00 38.71 4.85
1457 1627 0.173708 CTACGGAGAACACCAGCTCC 59.826 60.000 0.00 0.00 45.73 4.70
1494 1664 3.242518 GGCAACTAAGCCGTTTGATTTC 58.757 45.455 0.00 0.00 46.12 2.17
1520 1691 1.664649 TTCGCTTGCACGACAGGAG 60.665 57.895 0.00 0.00 42.78 3.69
1626 2373 4.806640 ATTACCACCAAAGGCATTTCAG 57.193 40.909 0.00 0.00 0.00 3.02
1638 2385 1.982226 AGTGCCACACTATTACCACCA 59.018 47.619 0.00 0.00 43.46 4.17
1639 2386 2.356135 CAGTGCCACACTATTACCACC 58.644 52.381 0.00 0.00 43.43 4.61
1640 2387 1.737793 GCAGTGCCACACTATTACCAC 59.262 52.381 2.85 0.00 43.43 4.16
1741 2490 3.668386 GGTGGAAAGCCGAACAGG 58.332 61.111 0.00 0.00 44.97 4.00
1749 2498 4.699522 ACGGAGCCGGTGGAAAGC 62.700 66.667 14.07 0.00 44.69 3.51
1750 2499 2.742372 CACGGAGCCGGTGGAAAG 60.742 66.667 14.07 0.00 44.69 2.62
1751 2500 4.323477 CCACGGAGCCGGTGGAAA 62.323 66.667 20.20 0.00 44.69 3.13
1754 2503 2.246761 TAATTCCACGGAGCCGGTGG 62.247 60.000 19.33 19.33 44.69 4.61
1755 2504 1.087771 GTAATTCCACGGAGCCGGTG 61.088 60.000 14.07 8.84 44.69 4.94
1756 2505 1.219935 GTAATTCCACGGAGCCGGT 59.780 57.895 14.07 0.00 44.69 5.28
1757 2506 0.810031 CTGTAATTCCACGGAGCCGG 60.810 60.000 14.07 0.00 44.69 6.13
1758 2507 0.174845 TCTGTAATTCCACGGAGCCG 59.825 55.000 7.48 7.48 46.03 5.52
1759 2508 2.396590 TTCTGTAATTCCACGGAGCC 57.603 50.000 0.00 0.00 35.30 4.70
1760 2509 3.557595 CAGATTCTGTAATTCCACGGAGC 59.442 47.826 5.46 0.00 35.30 4.70
1761 2510 3.557595 GCAGATTCTGTAATTCCACGGAG 59.442 47.826 14.90 0.00 35.30 4.63
1762 2511 3.055458 TGCAGATTCTGTAATTCCACGGA 60.055 43.478 14.90 0.00 33.43 4.69
1763 2512 3.270027 TGCAGATTCTGTAATTCCACGG 58.730 45.455 14.90 0.00 33.43 4.94
1764 2513 4.183865 TCTGCAGATTCTGTAATTCCACG 58.816 43.478 13.74 0.00 33.43 4.94
1765 2514 4.034975 GCTCTGCAGATTCTGTAATTCCAC 59.965 45.833 18.63 0.00 33.43 4.02
1766 2515 4.194640 GCTCTGCAGATTCTGTAATTCCA 58.805 43.478 18.63 2.90 33.43 3.53
1767 2516 4.034975 GTGCTCTGCAGATTCTGTAATTCC 59.965 45.833 18.63 0.00 40.08 3.01
1768 2517 4.034975 GGTGCTCTGCAGATTCTGTAATTC 59.965 45.833 18.63 3.40 40.08 2.17
1769 2518 3.944015 GGTGCTCTGCAGATTCTGTAATT 59.056 43.478 18.63 0.00 40.08 1.40
1770 2519 3.199508 AGGTGCTCTGCAGATTCTGTAAT 59.800 43.478 18.63 0.00 40.08 1.89
1771 2520 2.568956 AGGTGCTCTGCAGATTCTGTAA 59.431 45.455 18.63 3.67 40.08 2.41
1772 2521 2.182827 AGGTGCTCTGCAGATTCTGTA 58.817 47.619 18.63 9.75 40.08 2.74
1773 2522 0.982704 AGGTGCTCTGCAGATTCTGT 59.017 50.000 18.63 0.00 40.08 3.41
1774 2523 2.975732 TAGGTGCTCTGCAGATTCTG 57.024 50.000 18.63 9.40 40.08 3.02
1775 2524 4.500499 AATTAGGTGCTCTGCAGATTCT 57.500 40.909 18.63 13.94 40.08 2.40
1776 2525 4.036144 GGAAATTAGGTGCTCTGCAGATTC 59.964 45.833 18.63 13.91 40.08 2.52
1777 2526 3.950395 GGAAATTAGGTGCTCTGCAGATT 59.050 43.478 18.63 4.88 40.08 2.40
1778 2527 3.054139 TGGAAATTAGGTGCTCTGCAGAT 60.054 43.478 18.63 4.20 40.08 2.90
1779 2528 2.305635 TGGAAATTAGGTGCTCTGCAGA 59.694 45.455 17.19 17.19 40.08 4.26
1780 2529 2.681848 CTGGAAATTAGGTGCTCTGCAG 59.318 50.000 7.63 7.63 40.08 4.41
1781 2530 2.715046 CTGGAAATTAGGTGCTCTGCA 58.285 47.619 0.00 0.00 35.60 4.41
1782 2531 1.403323 GCTGGAAATTAGGTGCTCTGC 59.597 52.381 0.00 0.00 0.00 4.26
1783 2532 2.941720 GAGCTGGAAATTAGGTGCTCTG 59.058 50.000 12.95 0.00 42.28 3.35
1784 2533 2.092699 GGAGCTGGAAATTAGGTGCTCT 60.093 50.000 17.08 0.00 44.20 4.09
1785 2534 2.293170 GGAGCTGGAAATTAGGTGCTC 58.707 52.381 0.00 12.22 44.08 4.26
1786 2535 1.635487 TGGAGCTGGAAATTAGGTGCT 59.365 47.619 0.00 0.00 35.42 4.40
1787 2536 1.745653 GTGGAGCTGGAAATTAGGTGC 59.254 52.381 0.00 0.00 35.03 5.01
1788 2537 3.356529 AGTGGAGCTGGAAATTAGGTG 57.643 47.619 0.00 0.00 0.00 4.00
1789 2538 5.717119 AATAGTGGAGCTGGAAATTAGGT 57.283 39.130 0.00 0.00 0.00 3.08
1790 2539 8.697507 ATAAAATAGTGGAGCTGGAAATTAGG 57.302 34.615 0.00 0.00 0.00 2.69
1791 2540 8.787852 GGATAAAATAGTGGAGCTGGAAATTAG 58.212 37.037 0.00 0.00 0.00 1.73
1792 2541 7.724061 GGGATAAAATAGTGGAGCTGGAAATTA 59.276 37.037 0.00 0.00 0.00 1.40
1793 2542 6.551227 GGGATAAAATAGTGGAGCTGGAAATT 59.449 38.462 0.00 0.00 0.00 1.82
1794 2543 6.071320 GGGATAAAATAGTGGAGCTGGAAAT 58.929 40.000 0.00 0.00 0.00 2.17
1795 2544 5.193728 AGGGATAAAATAGTGGAGCTGGAAA 59.806 40.000 0.00 0.00 0.00 3.13
1796 2545 4.726825 AGGGATAAAATAGTGGAGCTGGAA 59.273 41.667 0.00 0.00 0.00 3.53
1797 2546 4.103153 CAGGGATAAAATAGTGGAGCTGGA 59.897 45.833 0.00 0.00 0.00 3.86
1798 2547 4.392940 CAGGGATAAAATAGTGGAGCTGG 58.607 47.826 0.00 0.00 0.00 4.85
1799 2548 3.817647 GCAGGGATAAAATAGTGGAGCTG 59.182 47.826 0.00 0.00 0.00 4.24
1800 2549 3.459598 TGCAGGGATAAAATAGTGGAGCT 59.540 43.478 0.00 0.00 0.00 4.09
1801 2550 3.817647 CTGCAGGGATAAAATAGTGGAGC 59.182 47.826 5.57 0.00 0.00 4.70
1802 2551 3.817647 GCTGCAGGGATAAAATAGTGGAG 59.182 47.826 17.12 0.00 0.00 3.86
1803 2552 3.459598 AGCTGCAGGGATAAAATAGTGGA 59.540 43.478 17.12 0.00 0.00 4.02
1804 2553 3.825328 AGCTGCAGGGATAAAATAGTGG 58.175 45.455 17.12 0.00 0.00 4.00
1805 2554 4.024556 CGAAGCTGCAGGGATAAAATAGTG 60.025 45.833 17.12 0.00 0.00 2.74
1806 2555 4.130118 CGAAGCTGCAGGGATAAAATAGT 58.870 43.478 17.12 0.00 0.00 2.12
1807 2556 4.739046 CGAAGCTGCAGGGATAAAATAG 57.261 45.455 17.12 0.00 0.00 1.73
1833 2582 2.101965 CAGACTCAGCTCGCGGAG 59.898 66.667 15.76 15.76 42.51 4.63
1834 2583 3.443925 CCAGACTCAGCTCGCGGA 61.444 66.667 6.13 0.00 0.00 5.54
1835 2584 3.408501 CTCCAGACTCAGCTCGCGG 62.409 68.421 6.13 0.00 0.00 6.46
1836 2585 2.101965 CTCCAGACTCAGCTCGCG 59.898 66.667 0.00 0.00 0.00 5.87
1837 2586 2.202730 GCTCCAGACTCAGCTCGC 60.203 66.667 0.00 0.00 32.48 5.03
1838 2587 2.101965 CGCTCCAGACTCAGCTCG 59.898 66.667 0.00 0.00 33.09 5.03
1839 2588 2.003658 CTCCGCTCCAGACTCAGCTC 62.004 65.000 0.00 0.00 33.09 4.09
1840 2589 2.036414 TCCGCTCCAGACTCAGCT 59.964 61.111 2.22 0.00 33.09 4.24
1841 2590 1.032657 TACTCCGCTCCAGACTCAGC 61.033 60.000 0.00 0.00 0.00 4.26
1842 2591 1.021202 CTACTCCGCTCCAGACTCAG 58.979 60.000 0.00 0.00 0.00 3.35
1843 2592 1.032657 GCTACTCCGCTCCAGACTCA 61.033 60.000 0.00 0.00 0.00 3.41
1844 2593 0.750182 AGCTACTCCGCTCCAGACTC 60.750 60.000 0.00 0.00 34.57 3.36
1845 2594 1.304952 AGCTACTCCGCTCCAGACT 59.695 57.895 0.00 0.00 34.57 3.24
1846 2595 3.927501 AGCTACTCCGCTCCAGAC 58.072 61.111 0.00 0.00 34.57 3.51
1856 2605 1.903183 AGGGAGTGTTTGGAGCTACTC 59.097 52.381 0.00 0.00 38.98 2.59
1857 2606 2.031495 AGGGAGTGTTTGGAGCTACT 57.969 50.000 0.00 0.00 0.00 2.57
1858 2607 3.975168 TTAGGGAGTGTTTGGAGCTAC 57.025 47.619 0.00 0.00 0.00 3.58
1859 2608 5.394883 CGTATTTAGGGAGTGTTTGGAGCTA 60.395 44.000 0.00 0.00 0.00 3.32
1860 2609 4.623171 CGTATTTAGGGAGTGTTTGGAGCT 60.623 45.833 0.00 0.00 0.00 4.09
1861 2610 3.621715 CGTATTTAGGGAGTGTTTGGAGC 59.378 47.826 0.00 0.00 0.00 4.70
1862 2611 5.080969 TCGTATTTAGGGAGTGTTTGGAG 57.919 43.478 0.00 0.00 0.00 3.86
1863 2612 5.424757 CATCGTATTTAGGGAGTGTTTGGA 58.575 41.667 0.00 0.00 0.00 3.53
1864 2613 4.574828 CCATCGTATTTAGGGAGTGTTTGG 59.425 45.833 0.00 0.00 0.00 3.28
1865 2614 5.183228 ACCATCGTATTTAGGGAGTGTTTG 58.817 41.667 0.00 0.00 0.00 2.93
1866 2615 5.431179 ACCATCGTATTTAGGGAGTGTTT 57.569 39.130 0.00 0.00 0.00 2.83
1867 2616 5.431179 AACCATCGTATTTAGGGAGTGTT 57.569 39.130 0.00 0.00 0.00 3.32
1868 2617 5.189145 AGAAACCATCGTATTTAGGGAGTGT 59.811 40.000 0.00 0.00 0.00 3.55
1869 2618 5.671493 AGAAACCATCGTATTTAGGGAGTG 58.329 41.667 0.00 0.00 0.00 3.51
1870 2619 5.661759 AGAGAAACCATCGTATTTAGGGAGT 59.338 40.000 0.00 0.00 0.00 3.85
1871 2620 5.986135 CAGAGAAACCATCGTATTTAGGGAG 59.014 44.000 0.00 0.00 0.00 4.30
1872 2621 5.684030 GCAGAGAAACCATCGTATTTAGGGA 60.684 44.000 0.00 0.00 0.00 4.20
1873 2622 4.511826 GCAGAGAAACCATCGTATTTAGGG 59.488 45.833 0.00 0.00 0.00 3.53
1874 2623 5.116180 TGCAGAGAAACCATCGTATTTAGG 58.884 41.667 0.00 0.00 0.00 2.69
1875 2624 6.073548 GGATGCAGAGAAACCATCGTATTTAG 60.074 42.308 0.00 0.00 36.97 1.85
1883 2632 4.219288 ACAAAAGGATGCAGAGAAACCATC 59.781 41.667 0.00 0.00 35.72 3.51
1895 2644 4.093850 GGCAATTGATTGACAAAAGGATGC 59.906 41.667 10.34 9.04 45.17 3.91
1930 2680 1.881973 TGCAGCACAAAGAGGACAATC 59.118 47.619 0.00 0.00 0.00 2.67
1945 2695 4.431086 CGTTATTGCGTTTAACTTTGCAGC 60.431 41.667 0.00 0.00 38.75 5.25
1968 2718 9.162764 AGATGGTTAATTACTCACACATTACAC 57.837 33.333 0.00 0.00 0.00 2.90
1975 2725 6.367969 ACAACGAGATGGTTAATTACTCACAC 59.632 38.462 0.00 0.00 0.00 3.82
2002 2752 3.064545 ACATCAAGCGAGCTAAAATCTGC 59.935 43.478 0.00 0.00 0.00 4.26
2077 2827 6.902417 GCAGTCGCATAGAAATCTAGTTTTTC 59.098 38.462 10.87 10.87 38.36 2.29
2099 2850 4.653981 GACTAAGGTCAGTGCAAGTGCAG 61.654 52.174 6.15 0.00 45.58 4.41
2188 2939 3.433615 GCGGGAGTATTACATGAAGATGC 59.566 47.826 0.00 0.00 32.14 3.91
2196 2947 3.039011 AGGAACAGCGGGAGTATTACAT 58.961 45.455 0.00 0.00 0.00 2.29
2204 2955 4.881850 ACAAATATTTAGGAACAGCGGGAG 59.118 41.667 0.00 0.00 0.00 4.30
2205 2956 4.850680 ACAAATATTTAGGAACAGCGGGA 58.149 39.130 0.00 0.00 0.00 5.14
2206 2957 4.881850 AGACAAATATTTAGGAACAGCGGG 59.118 41.667 0.00 0.00 0.00 6.13
2207 2958 6.436843 AAGACAAATATTTAGGAACAGCGG 57.563 37.500 0.00 0.00 0.00 5.52
2208 2959 8.742554 AAAAAGACAAATATTTAGGAACAGCG 57.257 30.769 0.00 0.00 0.00 5.18
2224 2975 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
2225 2976 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
2229 2980 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
2230 2981 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
2231 2982 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
2232 2983 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
2233 2984 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
2234 2985 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
2235 2986 8.562892 CATATGTGGTAGTCCATTTGAAATCTC 58.437 37.037 0.00 0.00 46.20 2.75
2236 2987 8.274322 TCATATGTGGTAGTCCATTTGAAATCT 58.726 33.333 1.90 0.00 46.20 2.40
2237 2988 8.450578 TCATATGTGGTAGTCCATTTGAAATC 57.549 34.615 1.90 0.00 46.20 2.17
2238 2989 8.821686 TTCATATGTGGTAGTCCATTTGAAAT 57.178 30.769 1.90 0.00 46.20 2.17
2239 2990 8.685427 CATTCATATGTGGTAGTCCATTTGAAA 58.315 33.333 1.90 0.00 46.20 2.69
2240 2991 7.833682 ACATTCATATGTGGTAGTCCATTTGAA 59.166 33.333 1.90 7.58 46.20 2.69
2241 2992 7.345691 ACATTCATATGTGGTAGTCCATTTGA 58.654 34.615 1.90 0.00 46.20 2.69
2242 2993 7.572523 ACATTCATATGTGGTAGTCCATTTG 57.427 36.000 1.90 0.00 46.20 2.32
2279 3030 9.155975 GCAAAATGAGTGAATCTAGTCTCTAAA 57.844 33.333 0.00 0.00 0.00 1.85
2280 3031 8.535335 AGCAAAATGAGTGAATCTAGTCTCTAA 58.465 33.333 0.00 0.00 0.00 2.10
2281 3032 8.072321 AGCAAAATGAGTGAATCTAGTCTCTA 57.928 34.615 0.00 0.00 0.00 2.43
2282 3033 6.945218 AGCAAAATGAGTGAATCTAGTCTCT 58.055 36.000 0.00 0.00 0.00 3.10
2283 3034 6.257630 GGAGCAAAATGAGTGAATCTAGTCTC 59.742 42.308 0.00 0.00 0.00 3.36
2284 3035 6.112058 GGAGCAAAATGAGTGAATCTAGTCT 58.888 40.000 0.00 0.00 0.00 3.24
2285 3036 5.006165 CGGAGCAAAATGAGTGAATCTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2286 3037 4.872691 CGGAGCAAAATGAGTGAATCTAGT 59.127 41.667 0.00 0.00 0.00 2.57
2287 3038 4.872691 ACGGAGCAAAATGAGTGAATCTAG 59.127 41.667 0.00 0.00 0.00 2.43
2288 3039 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2289 3040 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2290 3041 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2291 3042 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2292 3043 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2293 3044 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2294 3045 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2295 3046 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2296 3047 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
2297 3048 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
2298 3049 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
2299 3050 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
2300 3051 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2301 3052 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
2302 3053 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
2303 3054 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
2304 3055 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
2305 3056 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
2306 3057 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
2307 3058 6.183360 GGATTTCAACAAGTGACTACATACGG 60.183 42.308 0.00 0.00 35.39 4.02
2308 3059 6.183360 GGGATTTCAACAAGTGACTACATACG 60.183 42.308 0.00 0.00 35.39 3.06
2309 3060 6.879458 AGGGATTTCAACAAGTGACTACATAC 59.121 38.462 0.00 0.00 35.39 2.39
2310 3061 7.016153 AGGGATTTCAACAAGTGACTACATA 57.984 36.000 0.00 0.00 35.39 2.29
2311 3062 5.880901 AGGGATTTCAACAAGTGACTACAT 58.119 37.500 0.00 0.00 35.39 2.29
2312 3063 5.304686 AGGGATTTCAACAAGTGACTACA 57.695 39.130 0.00 0.00 35.39 2.74
2313 3064 6.698380 TCTAGGGATTTCAACAAGTGACTAC 58.302 40.000 0.00 0.00 35.39 2.73
2314 3065 6.928348 TCTAGGGATTTCAACAAGTGACTA 57.072 37.500 0.00 0.00 35.39 2.59
2315 3066 5.825593 TCTAGGGATTTCAACAAGTGACT 57.174 39.130 0.00 0.00 35.39 3.41
2316 3067 6.710744 TCTTTCTAGGGATTTCAACAAGTGAC 59.289 38.462 0.00 0.00 35.39 3.67
2317 3068 6.710744 GTCTTTCTAGGGATTTCAACAAGTGA 59.289 38.462 0.00 0.00 0.00 3.41
2318 3069 6.486657 TGTCTTTCTAGGGATTTCAACAAGTG 59.513 38.462 0.00 0.00 0.00 3.16
2319 3070 6.601332 TGTCTTTCTAGGGATTTCAACAAGT 58.399 36.000 0.00 0.00 0.00 3.16
2320 3071 7.510549 TTGTCTTTCTAGGGATTTCAACAAG 57.489 36.000 0.00 0.00 0.00 3.16
2321 3072 7.889873 TTTGTCTTTCTAGGGATTTCAACAA 57.110 32.000 0.00 0.00 0.00 2.83
2322 3073 9.753674 ATATTTGTCTTTCTAGGGATTTCAACA 57.246 29.630 0.00 0.00 0.00 3.33
2330 3081 9.901172 GTTCCTAAATATTTGTCTTTCTAGGGA 57.099 33.333 11.05 0.00 0.00 4.20
2331 3082 8.827677 CGTTCCTAAATATTTGTCTTTCTAGGG 58.172 37.037 11.05 0.00 0.00 3.53
2332 3083 8.827677 CCGTTCCTAAATATTTGTCTTTCTAGG 58.172 37.037 11.05 6.95 0.00 3.02
2333 3084 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2334 3085 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2335 3086 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
2336 3087 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
2337 3088 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2338 3089 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2339 3090 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2340 3091 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2341 3092 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2342 3093 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2343 3094 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2344 3095 8.759782 CATATACTCCCTCCGTTCCTAAATATT 58.240 37.037 0.00 0.00 0.00 1.28
2345 3096 8.120538 TCATATACTCCCTCCGTTCCTAAATAT 58.879 37.037 0.00 0.00 0.00 1.28
2346 3097 7.472741 TCATATACTCCCTCCGTTCCTAAATA 58.527 38.462 0.00 0.00 0.00 1.40
2347 3098 6.320518 TCATATACTCCCTCCGTTCCTAAAT 58.679 40.000 0.00 0.00 0.00 1.40
2348 3099 5.708544 TCATATACTCCCTCCGTTCCTAAA 58.291 41.667 0.00 0.00 0.00 1.85
2349 3100 5.163012 ACTCATATACTCCCTCCGTTCCTAA 60.163 44.000 0.00 0.00 0.00 2.69
2350 3101 4.353191 ACTCATATACTCCCTCCGTTCCTA 59.647 45.833 0.00 0.00 0.00 2.94
2351 3102 3.140519 ACTCATATACTCCCTCCGTTCCT 59.859 47.826 0.00 0.00 0.00 3.36
2352 3103 3.498334 ACTCATATACTCCCTCCGTTCC 58.502 50.000 0.00 0.00 0.00 3.62
2353 3104 6.645790 TTTACTCATATACTCCCTCCGTTC 57.354 41.667 0.00 0.00 0.00 3.95
2354 3105 7.949006 AGTATTTACTCATATACTCCCTCCGTT 59.051 37.037 0.00 0.00 33.42 4.44
2355 3106 7.468496 AGTATTTACTCATATACTCCCTCCGT 58.532 38.462 0.00 0.00 33.42 4.69
2356 3107 7.941431 AGTATTTACTCATATACTCCCTCCG 57.059 40.000 0.00 0.00 33.42 4.63
2377 3128 6.990349 GGAAAGGCTGCATGTAAACTATAGTA 59.010 38.462 5.65 0.00 0.00 1.82
2385 3136 3.153369 TGAGGAAAGGCTGCATGTAAA 57.847 42.857 0.50 0.00 0.00 2.01
2388 3139 1.251251 GTTGAGGAAAGGCTGCATGT 58.749 50.000 0.50 0.00 0.00 3.21
2390 3141 0.112995 TGGTTGAGGAAAGGCTGCAT 59.887 50.000 0.50 0.00 0.00 3.96
2430 3181 2.041620 ACTTTGCAGCATTAAGAGGGGA 59.958 45.455 12.90 0.00 0.00 4.81
2434 3185 6.587226 TGCATTTAACTTTGCAGCATTAAGAG 59.413 34.615 12.90 5.50 43.54 2.85
2490 3241 7.500720 TTACATCATAATCACATCAGGCAAG 57.499 36.000 0.00 0.00 0.00 4.01
2557 3309 6.814146 CAGTCACTTAGATGTCTACTTTTCCC 59.186 42.308 0.00 0.00 0.00 3.97
2560 3312 6.647067 GTGCAGTCACTTAGATGTCTACTTTT 59.353 38.462 0.00 0.00 40.03 2.27
2617 3369 1.554617 ACCAAAAGCTGCACCAAAACT 59.445 42.857 1.02 0.00 0.00 2.66
2618 3370 1.665169 CACCAAAAGCTGCACCAAAAC 59.335 47.619 1.02 0.00 0.00 2.43
2631 3383 5.860941 TTAACAAAGGCATCTCACCAAAA 57.139 34.783 0.00 0.00 0.00 2.44
2635 3387 4.218417 ACACATTAACAAAGGCATCTCACC 59.782 41.667 0.00 0.00 0.00 4.02
2637 3389 6.237901 ACTACACATTAACAAAGGCATCTCA 58.762 36.000 0.00 0.00 0.00 3.27
2751 3503 9.083422 TCTCAGTATTAAGATAGCAGCACTATT 57.917 33.333 0.00 0.00 41.87 1.73
2814 3566 6.566197 ACAAAAAGGAGCAGAGAAACTATG 57.434 37.500 0.00 0.00 0.00 2.23
2839 3591 2.790433 TGTTACAGAGGGCAATTGACC 58.210 47.619 23.87 23.87 46.16 4.02
3048 3824 1.460504 TCACCTACAGGCTACAGTCG 58.539 55.000 0.00 0.00 39.32 4.18
3230 4006 1.891919 CGGGTGGGATAATGTGCCG 60.892 63.158 0.00 0.00 42.19 5.69
3231 4007 2.193536 GCGGGTGGGATAATGTGCC 61.194 63.158 0.00 0.00 39.14 5.01
3290 4075 0.663153 GGCGGAATGGATGTTAGTGC 59.337 55.000 0.00 0.00 0.00 4.40
3309 4094 2.806244 CAGTCTTTGGAACCTGTAACGG 59.194 50.000 0.00 0.00 0.00 4.44
3518 4316 6.128172 GCTTGCTTGATAACTGTCTTACACAT 60.128 38.462 0.00 0.00 33.23 3.21
3589 4389 7.507672 AGATACTACAAAAGACGTGAATTCG 57.492 36.000 0.00 0.00 0.00 3.34
3667 4472 7.872113 ACATTCTGAAACTGAAAACTCTCTT 57.128 32.000 0.00 0.00 0.00 2.85
3752 4557 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
3753 4558 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
3754 4559 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
3755 4560 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
3756 4561 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
3758 4563 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
3759 4564 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
3760 4565 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
3761 4566 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
3762 4567 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
3763 4568 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
3779 4584 8.677148 ATGACATGAACAACTAGTACAAAGTT 57.323 30.769 0.00 7.59 37.67 2.66
3780 4585 9.944376 ATATGACATGAACAACTAGTACAAAGT 57.056 29.630 0.00 0.00 0.00 2.66
3783 4588 9.719355 ACAATATGACATGAACAACTAGTACAA 57.281 29.630 0.00 0.00 0.00 2.41
3787 4592 9.371136 CACTACAATATGACATGAACAACTAGT 57.629 33.333 0.00 0.00 0.00 2.57
3788 4593 8.331022 GCACTACAATATGACATGAACAACTAG 58.669 37.037 0.00 0.00 0.00 2.57
3789 4594 7.821846 TGCACTACAATATGACATGAACAACTA 59.178 33.333 0.00 0.00 0.00 2.24
3790 4595 6.654582 TGCACTACAATATGACATGAACAACT 59.345 34.615 0.00 0.00 0.00 3.16
3791 4596 6.841119 TGCACTACAATATGACATGAACAAC 58.159 36.000 0.00 0.00 0.00 3.32
3826 4631 5.880054 ATTTGACATCGAAAAGGTACCAG 57.120 39.130 15.94 0.00 0.00 4.00
3838 4643 1.202533 AGCCCTCGGTATTTGACATCG 60.203 52.381 0.00 0.00 0.00 3.84
3850 4655 1.068250 GAATCGAAGGAGCCCTCGG 59.932 63.158 7.60 0.00 30.89 4.63
3885 4861 8.757877 CCTGATTTAAACTGAAAAATATCCCCA 58.242 33.333 0.00 0.00 0.00 4.96
3897 4873 6.489700 TGCAAATGACTCCTGATTTAAACTGA 59.510 34.615 0.00 0.00 0.00 3.41
3898 4874 6.583806 GTGCAAATGACTCCTGATTTAAACTG 59.416 38.462 0.00 0.00 0.00 3.16
3900 4876 6.681777 AGTGCAAATGACTCCTGATTTAAAC 58.318 36.000 0.00 0.00 0.00 2.01
3906 4882 8.627403 CAAAATATAGTGCAAATGACTCCTGAT 58.373 33.333 0.00 0.00 0.00 2.90
3931 4913 4.012374 GAGTGGATGAAAATGCTTCTCCA 58.988 43.478 0.00 0.00 0.00 3.86
3971 4953 3.243234 TGTTTGATACCACAACAAAGGCG 60.243 43.478 0.00 0.00 34.86 5.52
3974 4956 6.377327 AGAGTGTTTGATACCACAACAAAG 57.623 37.500 0.00 0.00 34.86 2.77
3975 4957 6.601613 AGAAGAGTGTTTGATACCACAACAAA 59.398 34.615 0.00 0.00 0.00 2.83
3980 4962 4.065088 GCAGAAGAGTGTTTGATACCACA 58.935 43.478 0.00 0.00 0.00 4.17
3981 4963 4.065088 TGCAGAAGAGTGTTTGATACCAC 58.935 43.478 0.00 0.00 0.00 4.16
3984 4966 5.673337 TTGTGCAGAAGAGTGTTTGATAC 57.327 39.130 0.00 0.00 0.00 2.24
3999 4981 5.695851 ACCTGTAAGAGAAATTTGTGCAG 57.304 39.130 0.00 0.00 34.07 4.41
4068 5085 8.959705 AAAAAGTTCCTCCTTAGATTATACGG 57.040 34.615 0.00 0.00 0.00 4.02
4126 5175 6.678568 TTTATGGCCTCAATTTCTTTTCCA 57.321 33.333 3.32 0.00 0.00 3.53
4152 5201 4.235079 TGCTTCACTGTTTAGGCCATAT 57.765 40.909 5.01 0.00 0.00 1.78
4153 5202 3.712016 TGCTTCACTGTTTAGGCCATA 57.288 42.857 5.01 0.00 0.00 2.74
4154 5203 2.584835 TGCTTCACTGTTTAGGCCAT 57.415 45.000 5.01 0.00 0.00 4.40
4160 5209 6.707440 TTGATTTCCTTGCTTCACTGTTTA 57.293 33.333 0.00 0.00 0.00 2.01
4164 5213 3.924686 GCATTGATTTCCTTGCTTCACTG 59.075 43.478 0.00 0.00 32.41 3.66
4166 5215 3.916761 TGCATTGATTTCCTTGCTTCAC 58.083 40.909 0.00 0.00 36.10 3.18
4174 5223 5.655532 AGCAAACTCTATGCATTGATTTCCT 59.344 36.000 11.29 9.12 46.22 3.36
4188 5237 9.764363 CATTTGGTCTATACATAGCAAACTCTA 57.236 33.333 0.00 0.00 30.61 2.43
4189 5238 7.227512 GCATTTGGTCTATACATAGCAAACTCT 59.772 37.037 0.00 0.00 30.61 3.24
4192 5241 7.026631 TGCATTTGGTCTATACATAGCAAAC 57.973 36.000 0.00 0.00 30.61 2.93
4193 5242 7.650890 CATGCATTTGGTCTATACATAGCAAA 58.349 34.615 0.00 0.00 31.61 3.68
4194 5243 6.294120 GCATGCATTTGGTCTATACATAGCAA 60.294 38.462 14.21 0.00 0.00 3.91
4196 5245 5.181811 TGCATGCATTTGGTCTATACATAGC 59.818 40.000 18.46 0.00 0.00 2.97
4201 5250 4.097741 TGGTTGCATGCATTTGGTCTATAC 59.902 41.667 23.37 12.13 0.00 1.47
4206 5255 1.001181 AGTGGTTGCATGCATTTGGTC 59.999 47.619 23.37 10.21 0.00 4.02
4207 5256 1.001181 GAGTGGTTGCATGCATTTGGT 59.999 47.619 23.37 6.65 0.00 3.67
4209 5258 2.442212 TGAGTGGTTGCATGCATTTG 57.558 45.000 23.37 0.00 0.00 2.32
4210 5259 2.093869 GGATGAGTGGTTGCATGCATTT 60.094 45.455 23.37 5.41 33.66 2.32
4214 5263 0.889994 TTGGATGAGTGGTTGCATGC 59.110 50.000 11.82 11.82 34.01 4.06
4221 5270 0.475632 TGGACCCTTGGATGAGTGGT 60.476 55.000 0.00 0.00 0.00 4.16
4222 5271 0.921896 ATGGACCCTTGGATGAGTGG 59.078 55.000 0.00 0.00 0.00 4.00
4225 5274 2.038295 GAGCTATGGACCCTTGGATGAG 59.962 54.545 0.00 0.00 0.00 2.90
4226 5275 2.050144 GAGCTATGGACCCTTGGATGA 58.950 52.381 0.00 0.00 0.00 2.92
4336 5385 5.049267 GGTCTAATAACGTGGCAAACTTTGA 60.049 40.000 5.65 0.00 0.00 2.69
4337 5386 5.151389 GGTCTAATAACGTGGCAAACTTTG 58.849 41.667 0.00 0.00 0.00 2.77
4338 5387 4.822896 TGGTCTAATAACGTGGCAAACTTT 59.177 37.500 0.00 0.00 0.00 2.66
4341 5390 4.957759 ATGGTCTAATAACGTGGCAAAC 57.042 40.909 0.00 0.00 0.00 2.93
4375 5424 9.387397 TCCACTGGGAACTACATATTTGATATA 57.613 33.333 0.00 0.00 41.32 0.86
4376 5425 8.275187 TCCACTGGGAACTACATATTTGATAT 57.725 34.615 0.00 0.00 41.32 1.63
4377 5426 7.684317 TCCACTGGGAACTACATATTTGATA 57.316 36.000 0.00 0.00 41.32 2.15
4397 5516 5.120399 TCATGTTTTGTCCCGTATATCCAC 58.880 41.667 0.00 0.00 0.00 4.02
4407 5526 1.257750 GGCCCCTCATGTTTTGTCCC 61.258 60.000 0.00 0.00 0.00 4.46
4410 5529 0.105246 TTGGGCCCCTCATGTTTTGT 60.105 50.000 22.27 0.00 0.00 2.83
4411 5530 1.278537 ATTGGGCCCCTCATGTTTTG 58.721 50.000 22.27 0.00 0.00 2.44
4420 5540 1.003312 CATTGGGAATTGGGCCCCT 59.997 57.895 22.27 3.03 45.40 4.79
4450 5571 7.201513 CGTTGACAAGATTTGTTCCATGTTTTT 60.202 33.333 0.00 0.00 45.52 1.94
4466 5587 3.923461 CCTTTTGTTTTGCGTTGACAAGA 59.077 39.130 0.00 0.00 35.04 3.02
4467 5588 3.923461 TCCTTTTGTTTTGCGTTGACAAG 59.077 39.130 0.00 0.00 35.04 3.16
4476 5597 3.130340 TCAGGTGTCTCCTTTTGTTTTGC 59.870 43.478 0.00 0.00 45.67 3.68
4538 5678 2.113807 ATGAGGCCCTCATCTCATCA 57.886 50.000 20.78 0.00 46.83 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.