Multiple sequence alignment - TraesCS4B01G360700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G360700 chr4B 100.000 3731 0 0 1 3731 650667949 650664219 0.000000e+00 6890
1 TraesCS4B01G360700 chr4B 84.770 893 116 16 2845 3731 652812242 652811364 0.000000e+00 878
2 TraesCS4B01G360700 chr4B 80.798 927 111 27 1028 1930 649585554 649584671 0.000000e+00 664
3 TraesCS4B01G360700 chr4B 81.593 728 107 23 2024 2731 649584373 649583653 8.990000e-161 577
4 TraesCS4B01G360700 chr4B 82.567 522 54 15 100 606 385419163 385419662 3.440000e-115 425
5 TraesCS4B01G360700 chr4B 83.815 173 22 6 782 953 436881609 436881776 3.860000e-35 159
6 TraesCS4B01G360700 chr4B 96.000 75 3 0 792 866 339577220 339577146 5.060000e-24 122
7 TraesCS4B01G360700 chr5A 87.926 1615 122 30 976 2552 688736238 688734659 0.000000e+00 1834
8 TraesCS4B01G360700 chr5A 83.734 1039 109 29 1011 2023 688302596 688301592 0.000000e+00 928
9 TraesCS4B01G360700 chr5A 86.577 596 62 11 3 597 651620212 651620790 3.140000e-180 641
10 TraesCS4B01G360700 chr5A 83.779 598 66 23 2024 2599 688301530 688300942 4.240000e-149 538
11 TraesCS4B01G360700 chr5A 88.673 309 31 2 3 311 9427120 9426816 1.270000e-99 374
12 TraesCS4B01G360700 chr5A 82.222 405 38 21 2416 2801 688285451 688285062 6.010000e-83 318
13 TraesCS4B01G360700 chr5A 88.679 265 20 7 2548 2805 688734568 688734307 7.780000e-82 315
14 TraesCS4B01G360700 chr5A 93.750 80 5 0 787 866 448995865 448995786 1.820000e-23 121
15 TraesCS4B01G360700 chr4D 89.860 927 68 9 976 1888 504081598 504080684 0.000000e+00 1168
16 TraesCS4B01G360700 chr4D 91.907 729 49 6 2013 2731 504080424 504079696 0.000000e+00 1011
17 TraesCS4B01G360700 chr4D 81.996 1022 114 28 1028 2023 503793256 503792279 0.000000e+00 804
18 TraesCS4B01G360700 chr4D 88.067 595 64 7 1 593 4820712 4821301 0.000000e+00 699
19 TraesCS4B01G360700 chr4D 82.434 723 100 19 2024 2726 503792222 503791507 1.150000e-169 606
20 TraesCS4B01G360700 chr7D 88.543 899 92 8 2842 3731 126665011 126665907 0.000000e+00 1079
21 TraesCS4B01G360700 chr7D 86.932 903 97 10 2845 3731 532598757 532597860 0.000000e+00 994
22 TraesCS4B01G360700 chr7D 85.459 894 109 13 2843 3731 199909492 199908615 0.000000e+00 911
23 TraesCS4B01G360700 chr3D 88.176 888 85 10 2845 3717 359689747 359690629 0.000000e+00 1040
24 TraesCS4B01G360700 chr3D 85.477 902 112 14 2836 3729 112754705 112753815 0.000000e+00 922
25 TraesCS4B01G360700 chr1A 85.938 896 117 8 2840 3731 535082729 535083619 0.000000e+00 948
26 TraesCS4B01G360700 chr1A 86.777 605 70 7 1 600 259086004 259086603 0.000000e+00 665
27 TraesCS4B01G360700 chr2A 85.633 884 119 7 2846 3726 657916906 657917784 0.000000e+00 922
28 TraesCS4B01G360700 chr5B 84.994 893 121 9 2846 3726 642880821 642881712 0.000000e+00 894
29 TraesCS4B01G360700 chr5B 90.722 97 9 0 867 963 15669107 15669011 3.020000e-26 130
30 TraesCS4B01G360700 chr2D 84.950 897 118 12 2841 3731 555240075 555239190 0.000000e+00 893
31 TraesCS4B01G360700 chr6B 84.111 900 118 11 2845 3731 665094178 665095065 0.000000e+00 846
32 TraesCS4B01G360700 chr6B 92.632 95 7 0 867 961 718624490 718624396 1.810000e-28 137
33 TraesCS4B01G360700 chr6B 92.553 94 6 1 867 959 21375289 21375382 2.340000e-27 134
34 TraesCS4B01G360700 chr6B 95.181 83 3 1 785 866 718624385 718624467 3.020000e-26 130
35 TraesCS4B01G360700 chr5D 93.509 570 35 2 1 569 114370571 114371139 0.000000e+00 846
36 TraesCS4B01G360700 chr5D 79.545 176 32 3 792 963 524332117 524332292 5.060000e-24 122
37 TraesCS4B01G360700 chr3A 91.612 608 50 1 1 607 124547166 124546559 0.000000e+00 839
38 TraesCS4B01G360700 chr3A 91.579 95 8 0 867 961 491259457 491259551 8.410000e-27 132
39 TraesCS4B01G360700 chr4A 88.846 520 50 7 1 515 167771449 167770933 1.890000e-177 632
40 TraesCS4B01G360700 chr2B 96.321 299 10 1 1 299 143140786 143140489 1.200000e-134 490
41 TraesCS4B01G360700 chr7A 93.627 204 12 1 401 603 81785652 81785449 1.680000e-78 303
42 TraesCS4B01G360700 chr1D 83.234 167 24 3 795 957 467809189 467809355 2.320000e-32 150
43 TraesCS4B01G360700 chr1B 84.416 154 17 4 786 933 4753057 4753209 1.080000e-30 145
44 TraesCS4B01G360700 chr7B 90.625 96 9 0 867 962 501782389 501782484 1.090000e-25 128
45 TraesCS4B01G360700 chr3B 93.750 80 5 0 787 866 408415272 408415351 1.820000e-23 121
46 TraesCS4B01G360700 chr3B 89.247 93 6 3 774 866 696591054 696590966 3.050000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G360700 chr4B 650664219 650667949 3730 True 6890.0 6890 100.0000 1 3731 1 chr4B.!!$R2 3730
1 TraesCS4B01G360700 chr4B 652811364 652812242 878 True 878.0 878 84.7700 2845 3731 1 chr4B.!!$R3 886
2 TraesCS4B01G360700 chr4B 649583653 649585554 1901 True 620.5 664 81.1955 1028 2731 2 chr4B.!!$R4 1703
3 TraesCS4B01G360700 chr5A 688734307 688736238 1931 True 1074.5 1834 88.3025 976 2805 2 chr5A.!!$R5 1829
4 TraesCS4B01G360700 chr5A 688300942 688302596 1654 True 733.0 928 83.7565 1011 2599 2 chr5A.!!$R4 1588
5 TraesCS4B01G360700 chr5A 651620212 651620790 578 False 641.0 641 86.5770 3 597 1 chr5A.!!$F1 594
6 TraesCS4B01G360700 chr4D 504079696 504081598 1902 True 1089.5 1168 90.8835 976 2731 2 chr4D.!!$R2 1755
7 TraesCS4B01G360700 chr4D 503791507 503793256 1749 True 705.0 804 82.2150 1028 2726 2 chr4D.!!$R1 1698
8 TraesCS4B01G360700 chr4D 4820712 4821301 589 False 699.0 699 88.0670 1 593 1 chr4D.!!$F1 592
9 TraesCS4B01G360700 chr7D 126665011 126665907 896 False 1079.0 1079 88.5430 2842 3731 1 chr7D.!!$F1 889
10 TraesCS4B01G360700 chr7D 532597860 532598757 897 True 994.0 994 86.9320 2845 3731 1 chr7D.!!$R2 886
11 TraesCS4B01G360700 chr7D 199908615 199909492 877 True 911.0 911 85.4590 2843 3731 1 chr7D.!!$R1 888
12 TraesCS4B01G360700 chr3D 359689747 359690629 882 False 1040.0 1040 88.1760 2845 3717 1 chr3D.!!$F1 872
13 TraesCS4B01G360700 chr3D 112753815 112754705 890 True 922.0 922 85.4770 2836 3729 1 chr3D.!!$R1 893
14 TraesCS4B01G360700 chr1A 535082729 535083619 890 False 948.0 948 85.9380 2840 3731 1 chr1A.!!$F2 891
15 TraesCS4B01G360700 chr1A 259086004 259086603 599 False 665.0 665 86.7770 1 600 1 chr1A.!!$F1 599
16 TraesCS4B01G360700 chr2A 657916906 657917784 878 False 922.0 922 85.6330 2846 3726 1 chr2A.!!$F1 880
17 TraesCS4B01G360700 chr5B 642880821 642881712 891 False 894.0 894 84.9940 2846 3726 1 chr5B.!!$F1 880
18 TraesCS4B01G360700 chr2D 555239190 555240075 885 True 893.0 893 84.9500 2841 3731 1 chr2D.!!$R1 890
19 TraesCS4B01G360700 chr6B 665094178 665095065 887 False 846.0 846 84.1110 2845 3731 1 chr6B.!!$F2 886
20 TraesCS4B01G360700 chr5D 114370571 114371139 568 False 846.0 846 93.5090 1 569 1 chr5D.!!$F1 568
21 TraesCS4B01G360700 chr3A 124546559 124547166 607 True 839.0 839 91.6120 1 607 1 chr3A.!!$R1 606
22 TraesCS4B01G360700 chr4A 167770933 167771449 516 True 632.0 632 88.8460 1 515 1 chr4A.!!$R1 514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
612 625 0.034896 TGCCTCCGAGAAAACAGGAC 59.965 55.0 0.00 0.00 0.0 3.85 F
1441 1472 0.039165 GCAACAAGGTTGCTGCTACC 60.039 55.0 22.98 22.98 44.5 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2160 2551 0.180171 TCATCATTTGCGACGGGGAT 59.820 50.0 0.0 0.0 0.00 3.85 R
2804 3322 0.105658 CTGGATCCCCGTCCTTAGGA 60.106 60.0 9.9 0.0 39.12 2.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
111 116 0.905357 CACCTTTCCGACCATCTCCT 59.095 55.000 0.00 0.00 0.00 3.69
149 154 9.919416 TTTATGATCCATGTTTAATCTCCTTCA 57.081 29.630 0.00 0.00 0.00 3.02
189 194 2.354203 GCTTTCCAAGTGAGTCTCCGAT 60.354 50.000 0.00 0.00 0.00 4.18
200 205 5.596361 AGTGAGTCTCCGATAGAAACATCAT 59.404 40.000 0.00 0.00 35.47 2.45
215 220 2.097036 CATCATGTCTGGGTTGCATGT 58.903 47.619 0.00 0.00 40.40 3.21
274 279 0.899720 TCCGAGCCCGTTACAATTCT 59.100 50.000 0.00 0.00 0.00 2.40
393 403 2.999355 GAGGACAGCAGATCACAACTTC 59.001 50.000 0.00 0.00 0.00 3.01
394 404 2.369860 AGGACAGCAGATCACAACTTCA 59.630 45.455 0.00 0.00 0.00 3.02
457 467 1.839424 GGAGGACATCAAAACCCTGG 58.161 55.000 0.00 0.00 0.00 4.45
540 553 2.681778 CGAGGAGGTCACAGGGCT 60.682 66.667 0.00 0.00 0.00 5.19
584 597 1.523938 GCACCAACCCTAGATCGCC 60.524 63.158 0.00 0.00 0.00 5.54
586 599 0.251916 CACCAACCCTAGATCGCCAA 59.748 55.000 0.00 0.00 0.00 4.52
593 606 5.308825 CAACCCTAGATCGCCAAGAATATT 58.691 41.667 0.00 0.00 0.00 1.28
603 616 2.485479 GCCAAGAATATTGCCTCCGAGA 60.485 50.000 0.00 0.00 0.00 4.04
607 620 5.449177 CCAAGAATATTGCCTCCGAGAAAAC 60.449 44.000 0.00 0.00 0.00 2.43
608 621 4.843728 AGAATATTGCCTCCGAGAAAACA 58.156 39.130 0.00 0.00 0.00 2.83
609 622 4.878397 AGAATATTGCCTCCGAGAAAACAG 59.122 41.667 0.00 0.00 0.00 3.16
610 623 1.826385 ATTGCCTCCGAGAAAACAGG 58.174 50.000 0.00 0.00 0.00 4.00
611 624 0.762418 TTGCCTCCGAGAAAACAGGA 59.238 50.000 0.00 0.00 0.00 3.86
612 625 0.034896 TGCCTCCGAGAAAACAGGAC 59.965 55.000 0.00 0.00 0.00 3.85
613 626 0.321996 GCCTCCGAGAAAACAGGACT 59.678 55.000 0.00 0.00 0.00 3.85
614 627 1.673329 GCCTCCGAGAAAACAGGACTC 60.673 57.143 0.00 0.00 0.00 3.36
615 628 1.896465 CCTCCGAGAAAACAGGACTCT 59.104 52.381 0.00 0.00 0.00 3.24
616 629 2.094442 CCTCCGAGAAAACAGGACTCTC 60.094 54.545 0.00 0.00 33.65 3.20
617 630 2.823154 CTCCGAGAAAACAGGACTCTCT 59.177 50.000 0.00 0.00 34.63 3.10
618 631 2.820787 TCCGAGAAAACAGGACTCTCTC 59.179 50.000 0.00 0.00 34.63 3.20
619 632 2.823154 CCGAGAAAACAGGACTCTCTCT 59.177 50.000 0.00 0.00 34.63 3.10
620 633 3.366883 CCGAGAAAACAGGACTCTCTCTG 60.367 52.174 0.00 0.00 34.63 3.35
621 634 3.254657 CGAGAAAACAGGACTCTCTCTGT 59.745 47.826 0.00 0.00 45.06 3.41
622 635 4.555262 GAGAAAACAGGACTCTCTCTGTG 58.445 47.826 0.00 0.00 42.67 3.66
623 636 3.964031 AGAAAACAGGACTCTCTCTGTGT 59.036 43.478 0.00 0.00 42.67 3.72
624 637 3.742433 AAACAGGACTCTCTCTGTGTG 57.258 47.619 0.00 0.00 42.67 3.82
625 638 2.373335 ACAGGACTCTCTCTGTGTGT 57.627 50.000 0.00 0.00 42.00 3.72
626 639 3.510531 ACAGGACTCTCTCTGTGTGTA 57.489 47.619 0.00 0.00 42.00 2.90
627 640 3.417101 ACAGGACTCTCTCTGTGTGTAG 58.583 50.000 0.00 0.00 42.00 2.74
628 641 2.163412 CAGGACTCTCTCTGTGTGTAGC 59.837 54.545 0.00 0.00 0.00 3.58
629 642 2.163509 GGACTCTCTCTGTGTGTAGCA 58.836 52.381 0.00 0.00 0.00 3.49
630 643 2.163412 GGACTCTCTCTGTGTGTAGCAG 59.837 54.545 0.00 0.00 35.43 4.24
631 644 2.817258 GACTCTCTCTGTGTGTAGCAGT 59.183 50.000 0.00 0.00 35.60 4.40
632 645 2.817258 ACTCTCTCTGTGTGTAGCAGTC 59.183 50.000 0.00 0.00 35.60 3.51
633 646 3.081061 CTCTCTCTGTGTGTAGCAGTCT 58.919 50.000 0.00 0.00 35.60 3.24
634 647 3.078097 TCTCTCTGTGTGTAGCAGTCTC 58.922 50.000 0.00 0.00 35.60 3.36
635 648 3.081061 CTCTCTGTGTGTAGCAGTCTCT 58.919 50.000 0.00 0.00 35.60 3.10
636 649 2.816672 TCTCTGTGTGTAGCAGTCTCTG 59.183 50.000 0.00 0.00 35.60 3.35
637 650 2.816672 CTCTGTGTGTAGCAGTCTCTGA 59.183 50.000 0.66 0.00 35.60 3.27
638 651 3.222603 TCTGTGTGTAGCAGTCTCTGAA 58.777 45.455 0.66 0.00 35.60 3.02
639 652 3.004839 TCTGTGTGTAGCAGTCTCTGAAC 59.995 47.826 0.66 0.00 35.60 3.18
640 653 2.959030 TGTGTGTAGCAGTCTCTGAACT 59.041 45.455 0.66 0.00 32.44 3.01
641 654 4.142038 TGTGTGTAGCAGTCTCTGAACTA 58.858 43.478 0.66 0.00 32.44 2.24
642 655 4.216472 TGTGTGTAGCAGTCTCTGAACTAG 59.784 45.833 0.66 0.00 32.44 2.57
643 656 3.759086 TGTGTAGCAGTCTCTGAACTAGG 59.241 47.826 0.66 0.00 32.44 3.02
644 657 4.011023 GTGTAGCAGTCTCTGAACTAGGA 58.989 47.826 0.66 0.00 32.44 2.94
645 658 4.642885 GTGTAGCAGTCTCTGAACTAGGAT 59.357 45.833 0.66 0.00 32.44 3.24
646 659 5.823570 GTGTAGCAGTCTCTGAACTAGGATA 59.176 44.000 0.66 0.00 32.44 2.59
647 660 6.319152 GTGTAGCAGTCTCTGAACTAGGATAA 59.681 42.308 0.66 0.00 32.44 1.75
648 661 6.544197 TGTAGCAGTCTCTGAACTAGGATAAG 59.456 42.308 0.66 0.00 32.44 1.73
649 662 5.515106 AGCAGTCTCTGAACTAGGATAAGT 58.485 41.667 0.66 0.00 32.44 2.24
650 663 5.359576 AGCAGTCTCTGAACTAGGATAAGTG 59.640 44.000 0.66 0.00 32.44 3.16
651 664 5.126384 GCAGTCTCTGAACTAGGATAAGTGT 59.874 44.000 0.66 0.00 32.44 3.55
652 665 6.350612 GCAGTCTCTGAACTAGGATAAGTGTT 60.351 42.308 0.66 0.00 32.44 3.32
653 666 7.032580 CAGTCTCTGAACTAGGATAAGTGTTG 58.967 42.308 0.00 0.00 32.44 3.33
654 667 6.722129 AGTCTCTGAACTAGGATAAGTGTTGT 59.278 38.462 0.00 0.00 0.00 3.32
655 668 7.233757 AGTCTCTGAACTAGGATAAGTGTTGTT 59.766 37.037 0.00 0.00 0.00 2.83
656 669 7.873505 GTCTCTGAACTAGGATAAGTGTTGTTT 59.126 37.037 0.00 0.00 0.00 2.83
657 670 8.429641 TCTCTGAACTAGGATAAGTGTTGTTTT 58.570 33.333 0.00 0.00 0.00 2.43
658 671 8.603242 TCTGAACTAGGATAAGTGTTGTTTTC 57.397 34.615 0.00 0.00 0.00 2.29
659 672 7.384115 TCTGAACTAGGATAAGTGTTGTTTTCG 59.616 37.037 0.00 0.00 0.00 3.46
660 673 6.987992 TGAACTAGGATAAGTGTTGTTTTCGT 59.012 34.615 0.00 0.00 0.00 3.85
661 674 7.170320 TGAACTAGGATAAGTGTTGTTTTCGTC 59.830 37.037 0.00 0.00 0.00 4.20
662 675 6.756221 ACTAGGATAAGTGTTGTTTTCGTCT 58.244 36.000 0.00 0.00 0.00 4.18
663 676 7.215085 ACTAGGATAAGTGTTGTTTTCGTCTT 58.785 34.615 0.00 0.00 0.00 3.01
664 677 6.937436 AGGATAAGTGTTGTTTTCGTCTTT 57.063 33.333 0.00 0.00 0.00 2.52
665 678 7.329588 AGGATAAGTGTTGTTTTCGTCTTTT 57.670 32.000 0.00 0.00 0.00 2.27
666 679 7.768240 AGGATAAGTGTTGTTTTCGTCTTTTT 58.232 30.769 0.00 0.00 0.00 1.94
690 703 6.817765 TTTTCTAGTGTTGCATAAGGAAGG 57.182 37.500 0.00 0.00 0.00 3.46
691 704 5.755409 TTCTAGTGTTGCATAAGGAAGGA 57.245 39.130 0.00 0.00 0.00 3.36
692 705 5.755409 TCTAGTGTTGCATAAGGAAGGAA 57.245 39.130 0.00 0.00 0.00 3.36
693 706 5.734720 TCTAGTGTTGCATAAGGAAGGAAG 58.265 41.667 0.00 0.00 0.00 3.46
694 707 3.084786 AGTGTTGCATAAGGAAGGAAGC 58.915 45.455 0.00 0.00 0.00 3.86
695 708 3.084786 GTGTTGCATAAGGAAGGAAGCT 58.915 45.455 0.00 0.00 0.00 3.74
696 709 3.127721 GTGTTGCATAAGGAAGGAAGCTC 59.872 47.826 0.00 0.00 0.00 4.09
697 710 2.315925 TGCATAAGGAAGGAAGCTCG 57.684 50.000 0.00 0.00 0.00 5.03
698 711 1.555075 TGCATAAGGAAGGAAGCTCGT 59.445 47.619 0.00 0.00 0.00 4.18
699 712 1.936547 GCATAAGGAAGGAAGCTCGTG 59.063 52.381 0.00 0.00 0.00 4.35
700 713 2.418746 GCATAAGGAAGGAAGCTCGTGA 60.419 50.000 0.00 0.00 0.00 4.35
701 714 3.861840 CATAAGGAAGGAAGCTCGTGAA 58.138 45.455 0.00 0.00 0.00 3.18
702 715 4.446371 CATAAGGAAGGAAGCTCGTGAAT 58.554 43.478 0.00 0.00 0.00 2.57
703 716 2.682155 AGGAAGGAAGCTCGTGAATC 57.318 50.000 0.00 0.00 0.00 2.52
704 717 1.902508 AGGAAGGAAGCTCGTGAATCA 59.097 47.619 0.00 0.00 0.00 2.57
705 718 2.003301 GGAAGGAAGCTCGTGAATCAC 58.997 52.381 2.75 2.75 0.00 3.06
706 719 2.612972 GGAAGGAAGCTCGTGAATCACA 60.613 50.000 14.24 0.11 33.40 3.58
707 720 2.086054 AGGAAGCTCGTGAATCACAC 57.914 50.000 14.24 2.21 45.11 3.82
722 735 4.970662 ATCACACGGATTCTTTTGATGG 57.029 40.909 0.00 0.00 29.81 3.51
723 736 4.014569 TCACACGGATTCTTTTGATGGA 57.985 40.909 0.00 0.00 0.00 3.41
724 737 4.002982 TCACACGGATTCTTTTGATGGAG 58.997 43.478 0.00 0.00 0.00 3.86
725 738 4.002982 CACACGGATTCTTTTGATGGAGA 58.997 43.478 0.00 0.00 0.00 3.71
726 739 4.455533 CACACGGATTCTTTTGATGGAGAA 59.544 41.667 0.00 0.00 36.43 2.87
727 740 4.697352 ACACGGATTCTTTTGATGGAGAAG 59.303 41.667 0.00 0.00 35.54 2.85
728 741 3.691609 ACGGATTCTTTTGATGGAGAAGC 59.308 43.478 0.00 0.00 37.52 3.86
729 742 3.691118 CGGATTCTTTTGATGGAGAAGCA 59.309 43.478 4.12 0.00 39.40 3.91
730 743 4.156556 CGGATTCTTTTGATGGAGAAGCAA 59.843 41.667 4.12 0.00 39.40 3.91
731 744 5.335897 CGGATTCTTTTGATGGAGAAGCAAA 60.336 40.000 4.12 0.00 39.40 3.68
732 745 5.866092 GGATTCTTTTGATGGAGAAGCAAAC 59.134 40.000 4.12 0.00 39.40 2.93
733 746 4.853924 TCTTTTGATGGAGAAGCAAACC 57.146 40.909 0.00 0.00 31.89 3.27
734 747 3.573967 TCTTTTGATGGAGAAGCAAACCC 59.426 43.478 0.00 0.00 31.89 4.11
735 748 1.533625 TTGATGGAGAAGCAAACCCG 58.466 50.000 0.00 0.00 0.00 5.28
736 749 0.400213 TGATGGAGAAGCAAACCCGT 59.600 50.000 0.00 0.00 0.00 5.28
737 750 1.202879 TGATGGAGAAGCAAACCCGTT 60.203 47.619 0.00 0.00 0.00 4.44
738 751 2.039216 TGATGGAGAAGCAAACCCGTTA 59.961 45.455 0.00 0.00 0.00 3.18
739 752 2.642154 TGGAGAAGCAAACCCGTTAA 57.358 45.000 0.00 0.00 0.00 2.01
740 753 2.223745 TGGAGAAGCAAACCCGTTAAC 58.776 47.619 0.00 0.00 0.00 2.01
741 754 2.158726 TGGAGAAGCAAACCCGTTAACT 60.159 45.455 3.71 0.00 0.00 2.24
742 755 2.225727 GGAGAAGCAAACCCGTTAACTG 59.774 50.000 3.71 0.00 0.00 3.16
743 756 2.876550 GAGAAGCAAACCCGTTAACTGT 59.123 45.455 3.71 0.00 0.00 3.55
744 757 2.876550 AGAAGCAAACCCGTTAACTGTC 59.123 45.455 3.71 0.00 0.00 3.51
745 758 2.335316 AGCAAACCCGTTAACTGTCA 57.665 45.000 3.71 0.00 0.00 3.58
746 759 1.944709 AGCAAACCCGTTAACTGTCAC 59.055 47.619 3.71 0.00 0.00 3.67
747 760 1.944709 GCAAACCCGTTAACTGTCACT 59.055 47.619 3.71 0.00 0.00 3.41
748 761 3.132925 GCAAACCCGTTAACTGTCACTA 58.867 45.455 3.71 0.00 0.00 2.74
749 762 3.185797 GCAAACCCGTTAACTGTCACTAG 59.814 47.826 3.71 0.00 0.00 2.57
750 763 2.738013 ACCCGTTAACTGTCACTAGC 57.262 50.000 3.71 0.00 0.00 3.42
751 764 1.274447 ACCCGTTAACTGTCACTAGCC 59.726 52.381 3.71 0.00 0.00 3.93
752 765 1.549170 CCCGTTAACTGTCACTAGCCT 59.451 52.381 3.71 0.00 0.00 4.58
753 766 2.607187 CCGTTAACTGTCACTAGCCTG 58.393 52.381 3.71 0.00 0.00 4.85
754 767 2.029290 CCGTTAACTGTCACTAGCCTGT 60.029 50.000 3.71 0.00 0.00 4.00
755 768 2.987149 CGTTAACTGTCACTAGCCTGTG 59.013 50.000 3.71 0.74 39.15 3.66
756 769 3.326747 GTTAACTGTCACTAGCCTGTGG 58.673 50.000 0.00 0.00 38.40 4.17
757 770 0.687354 AACTGTCACTAGCCTGTGGG 59.313 55.000 6.81 1.90 38.40 4.61
781 794 2.833582 GGGACATCGCCCGAGAGA 60.834 66.667 0.00 0.00 38.58 3.10
782 795 2.203771 GGGACATCGCCCGAGAGAT 61.204 63.158 0.00 0.00 38.58 2.75
783 796 1.287503 GGACATCGCCCGAGAGATC 59.712 63.158 0.00 0.00 28.93 2.75
784 797 1.287503 GACATCGCCCGAGAGATCC 59.712 63.158 0.00 0.00 28.93 3.36
785 798 1.152652 ACATCGCCCGAGAGATCCT 60.153 57.895 0.00 0.00 28.93 3.24
786 799 0.110678 ACATCGCCCGAGAGATCCTA 59.889 55.000 0.00 0.00 28.93 2.94
787 800 0.808125 CATCGCCCGAGAGATCCTAG 59.192 60.000 0.00 0.00 28.93 3.02
788 801 0.963355 ATCGCCCGAGAGATCCTAGC 60.963 60.000 0.00 0.00 0.00 3.42
789 802 2.631580 CGCCCGAGAGATCCTAGCC 61.632 68.421 0.00 0.00 0.00 3.93
790 803 1.531840 GCCCGAGAGATCCTAGCCA 60.532 63.158 0.00 0.00 0.00 4.75
791 804 1.811645 GCCCGAGAGATCCTAGCCAC 61.812 65.000 0.00 0.00 0.00 5.01
792 805 0.178975 CCCGAGAGATCCTAGCCACT 60.179 60.000 0.00 0.00 0.00 4.00
793 806 1.074084 CCCGAGAGATCCTAGCCACTA 59.926 57.143 0.00 0.00 0.00 2.74
794 807 2.489255 CCCGAGAGATCCTAGCCACTAA 60.489 54.545 0.00 0.00 0.00 2.24
795 808 2.817258 CCGAGAGATCCTAGCCACTAAG 59.183 54.545 0.00 0.00 0.00 2.18
796 809 2.817258 CGAGAGATCCTAGCCACTAAGG 59.183 54.545 0.00 0.00 41.84 2.69
809 822 3.016736 CCACTAAGGCCTTGTACAATGG 58.983 50.000 28.77 19.60 0.00 3.16
810 823 3.016736 CACTAAGGCCTTGTACAATGGG 58.983 50.000 28.77 14.91 0.00 4.00
811 824 2.916934 ACTAAGGCCTTGTACAATGGGA 59.083 45.455 28.77 2.40 0.00 4.37
812 825 2.514458 AAGGCCTTGTACAATGGGAG 57.486 50.000 19.73 1.65 0.00 4.30
813 826 0.625849 AGGCCTTGTACAATGGGAGG 59.374 55.000 16.08 11.34 0.00 4.30
814 827 0.331616 GGCCTTGTACAATGGGAGGT 59.668 55.000 16.08 0.00 0.00 3.85
815 828 1.463674 GCCTTGTACAATGGGAGGTG 58.536 55.000 16.08 0.00 0.00 4.00
816 829 1.463674 CCTTGTACAATGGGAGGTGC 58.536 55.000 9.13 0.00 0.00 5.01
817 830 1.004745 CCTTGTACAATGGGAGGTGCT 59.995 52.381 9.13 0.00 0.00 4.40
818 831 2.555227 CCTTGTACAATGGGAGGTGCTT 60.555 50.000 9.13 0.00 0.00 3.91
819 832 3.308117 CCTTGTACAATGGGAGGTGCTTA 60.308 47.826 9.13 0.00 0.00 3.09
820 833 3.627395 TGTACAATGGGAGGTGCTTAG 57.373 47.619 0.00 0.00 0.00 2.18
821 834 3.178046 TGTACAATGGGAGGTGCTTAGA 58.822 45.455 0.00 0.00 0.00 2.10
822 835 3.197766 TGTACAATGGGAGGTGCTTAGAG 59.802 47.826 0.00 0.00 0.00 2.43
823 836 1.561542 ACAATGGGAGGTGCTTAGAGG 59.438 52.381 0.00 0.00 0.00 3.69
824 837 1.133976 CAATGGGAGGTGCTTAGAGGG 60.134 57.143 0.00 0.00 0.00 4.30
825 838 0.695803 ATGGGAGGTGCTTAGAGGGG 60.696 60.000 0.00 0.00 0.00 4.79
826 839 1.307084 GGGAGGTGCTTAGAGGGGT 60.307 63.158 0.00 0.00 0.00 4.95
827 840 1.627297 GGGAGGTGCTTAGAGGGGTG 61.627 65.000 0.00 0.00 0.00 4.61
828 841 1.222113 GAGGTGCTTAGAGGGGTGC 59.778 63.158 0.00 0.00 0.00 5.01
829 842 1.229658 AGGTGCTTAGAGGGGTGCT 60.230 57.895 0.00 0.00 0.00 4.40
830 843 0.842467 AGGTGCTTAGAGGGGTGCTT 60.842 55.000 0.00 0.00 0.00 3.91
831 844 0.909623 GGTGCTTAGAGGGGTGCTTA 59.090 55.000 0.00 0.00 0.00 3.09
832 845 1.134371 GGTGCTTAGAGGGGTGCTTAG 60.134 57.143 0.00 0.00 0.00 2.18
833 846 1.831736 GTGCTTAGAGGGGTGCTTAGA 59.168 52.381 0.00 0.00 0.00 2.10
834 847 2.236395 GTGCTTAGAGGGGTGCTTAGAA 59.764 50.000 0.00 0.00 0.00 2.10
835 848 2.910319 TGCTTAGAGGGGTGCTTAGAAA 59.090 45.455 0.00 0.00 0.00 2.52
836 849 3.329520 TGCTTAGAGGGGTGCTTAGAAAA 59.670 43.478 0.00 0.00 0.00 2.29
837 850 4.202524 TGCTTAGAGGGGTGCTTAGAAAAA 60.203 41.667 0.00 0.00 0.00 1.94
838 851 4.950475 GCTTAGAGGGGTGCTTAGAAAAAT 59.050 41.667 0.00 0.00 0.00 1.82
839 852 6.120220 GCTTAGAGGGGTGCTTAGAAAAATA 58.880 40.000 0.00 0.00 0.00 1.40
840 853 6.602009 GCTTAGAGGGGTGCTTAGAAAAATAA 59.398 38.462 0.00 0.00 0.00 1.40
841 854 7.122204 GCTTAGAGGGGTGCTTAGAAAAATAAA 59.878 37.037 0.00 0.00 0.00 1.40
842 855 6.835819 AGAGGGGTGCTTAGAAAAATAAAC 57.164 37.500 0.00 0.00 0.00 2.01
843 856 5.715279 AGAGGGGTGCTTAGAAAAATAAACC 59.285 40.000 0.00 0.00 0.00 3.27
844 857 4.461431 AGGGGTGCTTAGAAAAATAAACCG 59.539 41.667 0.00 0.00 0.00 4.44
845 858 4.381185 GGGGTGCTTAGAAAAATAAACCGG 60.381 45.833 0.00 0.00 0.00 5.28
846 859 4.381185 GGGTGCTTAGAAAAATAAACCGGG 60.381 45.833 6.32 0.00 0.00 5.73
847 860 4.219070 GGTGCTTAGAAAAATAAACCGGGT 59.781 41.667 6.32 0.00 0.00 5.28
848 861 5.279106 GGTGCTTAGAAAAATAAACCGGGTT 60.279 40.000 10.96 10.96 0.00 4.11
849 862 6.218019 GTGCTTAGAAAAATAAACCGGGTTT 58.782 36.000 26.79 26.79 39.24 3.27
850 863 6.702723 GTGCTTAGAAAAATAAACCGGGTTTT 59.297 34.615 28.50 11.74 37.01 2.43
851 864 7.225145 GTGCTTAGAAAAATAAACCGGGTTTTT 59.775 33.333 28.50 18.85 37.01 1.94
852 865 7.438757 TGCTTAGAAAAATAAACCGGGTTTTTC 59.561 33.333 28.50 23.47 45.36 2.29
858 871 7.718272 AAAATAAACCGGGTTTTTCTAAAGC 57.282 32.000 28.50 0.00 40.23 3.51
859 872 6.408107 AATAAACCGGGTTTTTCTAAAGCA 57.592 33.333 28.50 9.23 42.19 3.91
860 873 4.948341 AAACCGGGTTTTTCTAAAGCAT 57.052 36.364 19.22 0.00 42.19 3.79
861 874 4.514781 AACCGGGTTTTTCTAAAGCATC 57.485 40.909 6.59 0.00 42.19 3.91
862 875 2.486592 ACCGGGTTTTTCTAAAGCATCG 59.513 45.455 6.32 0.00 42.19 3.84
863 876 2.159435 CCGGGTTTTTCTAAAGCATCGG 60.159 50.000 0.00 0.00 42.19 4.18
864 877 2.486592 CGGGTTTTTCTAAAGCATCGGT 59.513 45.455 0.00 0.00 42.19 4.69
865 878 3.669557 CGGGTTTTTCTAAAGCATCGGTG 60.670 47.826 0.00 0.00 42.19 4.94
866 879 3.504520 GGGTTTTTCTAAAGCATCGGTGA 59.495 43.478 0.00 0.00 42.19 4.02
867 880 4.379499 GGGTTTTTCTAAAGCATCGGTGAG 60.379 45.833 0.00 0.00 42.19 3.51
868 881 4.159120 GTTTTTCTAAAGCATCGGTGAGC 58.841 43.478 0.00 0.00 0.00 4.26
869 882 1.640428 TTCTAAAGCATCGGTGAGCG 58.360 50.000 0.00 0.00 35.48 5.03
870 883 0.530744 TCTAAAGCATCGGTGAGCGT 59.469 50.000 0.00 0.00 35.48 5.07
871 884 0.924090 CTAAAGCATCGGTGAGCGTC 59.076 55.000 0.00 0.00 35.48 5.19
872 885 0.530744 TAAAGCATCGGTGAGCGTCT 59.469 50.000 0.00 0.00 35.48 4.18
873 886 0.737715 AAAGCATCGGTGAGCGTCTC 60.738 55.000 0.00 0.58 35.48 3.36
874 887 1.599606 AAGCATCGGTGAGCGTCTCT 61.600 55.000 0.00 0.00 35.48 3.10
875 888 1.587613 GCATCGGTGAGCGTCTCTC 60.588 63.158 0.00 4.86 42.23 3.20
885 898 4.991153 TGAGCGTCTCTCATGTAGAAAT 57.009 40.909 8.07 0.00 46.34 2.17
887 900 6.066054 TGAGCGTCTCTCATGTAGAAATAG 57.934 41.667 8.07 0.00 46.34 1.73
888 901 5.009110 TGAGCGTCTCTCATGTAGAAATAGG 59.991 44.000 8.07 0.00 46.34 2.57
889 902 3.984633 GCGTCTCTCATGTAGAAATAGGC 59.015 47.826 0.00 0.00 32.46 3.93
890 903 4.499865 GCGTCTCTCATGTAGAAATAGGCA 60.500 45.833 0.00 0.00 32.46 4.75
891 904 5.777802 CGTCTCTCATGTAGAAATAGGCAT 58.222 41.667 0.00 0.00 32.46 4.40
892 905 6.219473 CGTCTCTCATGTAGAAATAGGCATT 58.781 40.000 0.00 0.00 32.46 3.56
893 906 6.145209 CGTCTCTCATGTAGAAATAGGCATTG 59.855 42.308 0.00 0.00 32.46 2.82
894 907 6.426328 GTCTCTCATGTAGAAATAGGCATTGG 59.574 42.308 0.00 0.00 32.46 3.16
895 908 6.100279 TCTCTCATGTAGAAATAGGCATTGGT 59.900 38.462 0.00 0.00 32.46 3.67
896 909 6.057533 TCTCATGTAGAAATAGGCATTGGTG 58.942 40.000 0.00 0.00 0.00 4.17
897 910 5.754782 TCATGTAGAAATAGGCATTGGTGT 58.245 37.500 0.00 0.00 0.00 4.16
898 911 6.186957 TCATGTAGAAATAGGCATTGGTGTT 58.813 36.000 0.00 0.00 0.00 3.32
899 912 6.663093 TCATGTAGAAATAGGCATTGGTGTTT 59.337 34.615 0.00 0.00 0.00 2.83
900 913 6.909550 TGTAGAAATAGGCATTGGTGTTTT 57.090 33.333 0.00 0.00 0.00 2.43
901 914 8.465999 CATGTAGAAATAGGCATTGGTGTTTTA 58.534 33.333 0.00 0.00 0.00 1.52
902 915 8.050778 TGTAGAAATAGGCATTGGTGTTTTAG 57.949 34.615 0.00 0.00 0.00 1.85
903 916 7.885922 TGTAGAAATAGGCATTGGTGTTTTAGA 59.114 33.333 0.00 0.00 0.00 2.10
904 917 7.775053 AGAAATAGGCATTGGTGTTTTAGAA 57.225 32.000 0.00 0.00 0.00 2.10
905 918 8.189119 AGAAATAGGCATTGGTGTTTTAGAAA 57.811 30.769 0.00 0.00 0.00 2.52
906 919 8.646900 AGAAATAGGCATTGGTGTTTTAGAAAA 58.353 29.630 0.00 0.00 0.00 2.29
907 920 9.267084 GAAATAGGCATTGGTGTTTTAGAAAAA 57.733 29.630 0.00 0.00 0.00 1.94
908 921 9.791801 AAATAGGCATTGGTGTTTTAGAAAAAT 57.208 25.926 0.00 0.00 0.00 1.82
909 922 9.435688 AATAGGCATTGGTGTTTTAGAAAAATC 57.564 29.630 0.00 0.00 0.00 2.17
910 923 6.230472 AGGCATTGGTGTTTTAGAAAAATCC 58.770 36.000 0.00 0.00 0.00 3.01
911 924 5.120053 GGCATTGGTGTTTTAGAAAAATCCG 59.880 40.000 0.00 0.00 0.00 4.18
912 925 5.923684 GCATTGGTGTTTTAGAAAAATCCGA 59.076 36.000 0.00 0.00 0.00 4.55
913 926 6.589907 GCATTGGTGTTTTAGAAAAATCCGAT 59.410 34.615 0.00 6.46 32.32 4.18
914 927 7.117667 GCATTGGTGTTTTAGAAAAATCCGATT 59.882 33.333 8.36 0.00 31.03 3.34
915 928 8.987890 CATTGGTGTTTTAGAAAAATCCGATTT 58.012 29.630 0.17 0.17 31.03 2.17
930 943 8.926715 AAATCCGATTTATTTTTCTAAGCACC 57.073 30.769 4.46 0.00 0.00 5.01
931 944 7.881775 ATCCGATTTATTTTTCTAAGCACCT 57.118 32.000 0.00 0.00 0.00 4.00
932 945 7.316544 TCCGATTTATTTTTCTAAGCACCTC 57.683 36.000 0.00 0.00 0.00 3.85
933 946 7.110155 TCCGATTTATTTTTCTAAGCACCTCT 58.890 34.615 0.00 0.00 0.00 3.69
934 947 7.280205 TCCGATTTATTTTTCTAAGCACCTCTC 59.720 37.037 0.00 0.00 0.00 3.20
935 948 7.281100 CCGATTTATTTTTCTAAGCACCTCTCT 59.719 37.037 0.00 0.00 0.00 3.10
936 949 9.314321 CGATTTATTTTTCTAAGCACCTCTCTA 57.686 33.333 0.00 0.00 0.00 2.43
939 952 6.993786 ATTTTTCTAAGCACCTCTCTAAGC 57.006 37.500 0.00 0.00 0.00 3.09
940 953 5.483685 TTTTCTAAGCACCTCTCTAAGCA 57.516 39.130 0.00 0.00 0.00 3.91
941 954 4.457834 TTCTAAGCACCTCTCTAAGCAC 57.542 45.455 0.00 0.00 0.00 4.40
942 955 2.761208 TCTAAGCACCTCTCTAAGCACC 59.239 50.000 0.00 0.00 0.00 5.01
943 956 1.650528 AAGCACCTCTCTAAGCACCT 58.349 50.000 0.00 0.00 0.00 4.00
944 957 1.190643 AGCACCTCTCTAAGCACCTC 58.809 55.000 0.00 0.00 0.00 3.85
945 958 0.176910 GCACCTCTCTAAGCACCTCC 59.823 60.000 0.00 0.00 0.00 4.30
946 959 0.827368 CACCTCTCTAAGCACCTCCC 59.173 60.000 0.00 0.00 0.00 4.30
947 960 0.413832 ACCTCTCTAAGCACCTCCCA 59.586 55.000 0.00 0.00 0.00 4.37
948 961 1.008938 ACCTCTCTAAGCACCTCCCAT 59.991 52.381 0.00 0.00 0.00 4.00
949 962 2.122768 CCTCTCTAAGCACCTCCCATT 58.877 52.381 0.00 0.00 0.00 3.16
950 963 2.158842 CCTCTCTAAGCACCTCCCATTG 60.159 54.545 0.00 0.00 0.00 2.82
951 964 2.503356 CTCTCTAAGCACCTCCCATTGT 59.497 50.000 0.00 0.00 0.00 2.71
952 965 3.706594 CTCTCTAAGCACCTCCCATTGTA 59.293 47.826 0.00 0.00 0.00 2.41
953 966 3.451178 TCTCTAAGCACCTCCCATTGTAC 59.549 47.826 0.00 0.00 0.00 2.90
954 967 3.178046 TCTAAGCACCTCCCATTGTACA 58.822 45.455 0.00 0.00 0.00 2.90
955 968 2.969821 AAGCACCTCCCATTGTACAA 57.030 45.000 11.41 11.41 0.00 2.41
956 969 2.496899 AGCACCTCCCATTGTACAAG 57.503 50.000 14.65 6.30 0.00 3.16
957 970 0.811281 GCACCTCCCATTGTACAAGC 59.189 55.000 14.65 5.50 0.00 4.01
958 971 1.463674 CACCTCCCATTGTACAAGCC 58.536 55.000 14.65 0.00 0.00 4.35
959 972 0.331616 ACCTCCCATTGTACAAGCCC 59.668 55.000 14.65 0.00 0.00 5.19
960 973 0.625849 CCTCCCATTGTACAAGCCCT 59.374 55.000 14.65 0.00 0.00 5.19
961 974 1.843851 CCTCCCATTGTACAAGCCCTA 59.156 52.381 14.65 0.00 0.00 3.53
962 975 2.241176 CCTCCCATTGTACAAGCCCTAA 59.759 50.000 14.65 0.00 0.00 2.69
963 976 3.117512 CCTCCCATTGTACAAGCCCTAAT 60.118 47.826 14.65 0.00 0.00 1.73
964 977 4.137543 CTCCCATTGTACAAGCCCTAATC 58.862 47.826 14.65 0.00 0.00 1.75
965 978 3.117663 TCCCATTGTACAAGCCCTAATCC 60.118 47.826 14.65 0.00 0.00 3.01
966 979 2.878406 CCATTGTACAAGCCCTAATCCG 59.122 50.000 14.65 0.00 0.00 4.18
967 980 2.032680 TTGTACAAGCCCTAATCCGC 57.967 50.000 3.59 0.00 0.00 5.54
968 981 0.906066 TGTACAAGCCCTAATCCGCA 59.094 50.000 0.00 0.00 0.00 5.69
969 982 1.488812 TGTACAAGCCCTAATCCGCAT 59.511 47.619 0.00 0.00 0.00 4.73
970 983 2.143925 GTACAAGCCCTAATCCGCATC 58.856 52.381 0.00 0.00 0.00 3.91
971 984 0.546122 ACAAGCCCTAATCCGCATCA 59.454 50.000 0.00 0.00 0.00 3.07
972 985 1.064758 ACAAGCCCTAATCCGCATCAA 60.065 47.619 0.00 0.00 0.00 2.57
973 986 1.605710 CAAGCCCTAATCCGCATCAAG 59.394 52.381 0.00 0.00 0.00 3.02
974 987 0.536006 AGCCCTAATCCGCATCAAGC 60.536 55.000 0.00 0.00 40.87 4.01
1172 1193 0.261991 TCGTAAGCTCCCATCTCCCT 59.738 55.000 0.00 0.00 37.18 4.20
1174 1195 1.486726 CGTAAGCTCCCATCTCCCTTT 59.513 52.381 0.00 0.00 0.00 3.11
1175 1196 2.092914 CGTAAGCTCCCATCTCCCTTTT 60.093 50.000 0.00 0.00 0.00 2.27
1176 1197 2.816777 AAGCTCCCATCTCCCTTTTC 57.183 50.000 0.00 0.00 0.00 2.29
1316 1337 4.424711 GGTGCCCGCCTGATTGGA 62.425 66.667 0.00 0.00 38.35 3.53
1340 1371 5.033522 AGTAGCTCCCTTCCATTTCTTACT 58.966 41.667 0.00 0.00 0.00 2.24
1356 1387 5.319043 TCTTACTGGTTTTGACCTGGAAT 57.681 39.130 0.00 0.00 32.25 3.01
1369 1400 2.368548 ACCTGGAATTTTTGGTCTTGCC 59.631 45.455 0.00 0.00 37.90 4.52
1441 1472 0.039165 GCAACAAGGTTGCTGCTACC 60.039 55.000 22.98 22.98 44.50 3.18
1461 1497 1.743394 CAATCCCGTGCTTTCTAACCC 59.257 52.381 0.00 0.00 0.00 4.11
1522 1569 1.883725 GCTCGTTTCGTCGTGGGAAC 61.884 60.000 0.00 0.00 0.00 3.62
1550 1597 3.009033 ACGAACAGATTGGGGAGATCAAA 59.991 43.478 0.00 0.00 0.00 2.69
1588 1645 1.429463 GTAGGGCGTGTGAAGAACTG 58.571 55.000 0.00 0.00 0.00 3.16
1592 1649 1.237285 GGCGTGTGAAGAACTGGCAT 61.237 55.000 0.00 0.00 32.92 4.40
1752 1829 1.345715 ATGGTTCCAGTCCCGATCCC 61.346 60.000 0.00 0.00 0.00 3.85
1780 1857 0.818296 CCAGGTTAGAGCTGCGTACT 59.182 55.000 0.00 0.00 42.05 2.73
1826 1904 1.135721 GGTGGAGATGCCTTGCAAATC 59.864 52.381 0.00 0.57 43.62 2.17
1942 2098 2.498167 GGGGTTTGATCATCTCATCGG 58.502 52.381 0.00 0.00 32.72 4.18
1961 2126 2.484889 GGGAGATGACGGCTTAACATC 58.515 52.381 0.00 0.00 40.14 3.06
1965 2130 3.703420 AGATGACGGCTTAACATCGTAC 58.297 45.455 0.00 0.00 43.22 3.67
1969 2134 4.414852 TGACGGCTTAACATCGTACTAAC 58.585 43.478 0.00 0.00 37.25 2.34
1970 2135 4.082841 TGACGGCTTAACATCGTACTAACA 60.083 41.667 0.00 0.00 37.25 2.41
2046 2436 9.399797 ACAGCTGATTTCATTGATATTAAGTGA 57.600 29.630 23.35 0.00 0.00 3.41
2160 2551 1.651770 ACTTAGGACCATCTCCAGGGA 59.348 52.381 0.00 0.00 42.46 4.20
2216 2607 1.343789 CATCTCGATCCATCAGCTGGT 59.656 52.381 15.13 2.68 46.08 4.00
2234 2625 4.130118 CTGGTCCAGTTGATACCTATTGC 58.870 47.826 11.09 0.00 34.23 3.56
2258 2649 6.179040 CCTTCTGACTCTTGATCCAGAAAAT 58.821 40.000 9.98 0.00 42.75 1.82
2317 2709 3.391506 TCATATCGGGATCTGCACTTG 57.608 47.619 0.00 0.00 0.00 3.16
2330 2722 7.067494 GGGATCTGCACTTGTACTTTGAAATAT 59.933 37.037 0.00 0.00 0.00 1.28
2375 2784 5.623956 TTCATATTCCCCTATCGTGTTGT 57.376 39.130 0.00 0.00 0.00 3.32
2434 2844 5.120830 CGTGAACCTGAAAAGTAATCAGAGG 59.879 44.000 5.16 0.00 45.74 3.69
2533 2944 7.444183 TCTTTTGTTACAGAGGGTGAACATAAG 59.556 37.037 9.23 9.23 39.83 1.73
2590 3097 3.749665 TTTTCCATTGCAAGGAACTGG 57.250 42.857 22.26 16.72 44.41 4.00
2649 3157 0.469705 TGTTTGGCAGAGCACCCATT 60.470 50.000 0.00 0.00 0.00 3.16
2663 3171 6.156256 AGAGCACCCATTGATTACTTGTACTA 59.844 38.462 0.00 0.00 0.00 1.82
2674 3182 9.516546 TTGATTACTTGTACTAGAGAGTTGAGA 57.483 33.333 11.43 0.00 37.10 3.27
2739 3257 6.013379 TGATATCTCTAAGTAAGGCCAGGAG 58.987 44.000 5.01 1.49 0.00 3.69
2754 3272 4.180057 GCCAGGAGATACATCGAATCATC 58.820 47.826 0.00 0.00 0.00 2.92
2755 3273 4.081752 GCCAGGAGATACATCGAATCATCT 60.082 45.833 5.89 5.89 0.00 2.90
2756 3274 5.126222 GCCAGGAGATACATCGAATCATCTA 59.874 44.000 6.13 0.00 0.00 1.98
2757 3275 6.559810 CCAGGAGATACATCGAATCATCTAC 58.440 44.000 7.36 7.36 0.00 2.59
2758 3276 6.151817 CCAGGAGATACATCGAATCATCTACA 59.848 42.308 14.62 0.00 31.78 2.74
2759 3277 7.147932 CCAGGAGATACATCGAATCATCTACAT 60.148 40.741 14.62 2.29 31.78 2.29
2801 3319 6.430925 ACAACAGTATCATGCACACAAACTAT 59.569 34.615 0.00 0.00 0.00 2.12
2802 3320 6.426980 ACAGTATCATGCACACAAACTATG 57.573 37.500 0.00 0.00 0.00 2.23
2803 3321 6.172630 ACAGTATCATGCACACAAACTATGA 58.827 36.000 0.00 0.00 32.90 2.15
2804 3322 6.825213 ACAGTATCATGCACACAAACTATGAT 59.175 34.615 0.00 0.00 40.47 2.45
2805 3323 7.011763 ACAGTATCATGCACACAAACTATGATC 59.988 37.037 0.00 0.00 38.83 2.92
2806 3324 5.762825 ATCATGCACACAAACTATGATCC 57.237 39.130 0.00 0.00 34.37 3.36
2807 3325 4.847198 TCATGCACACAAACTATGATCCT 58.153 39.130 0.00 0.00 0.00 3.24
2808 3326 5.988287 TCATGCACACAAACTATGATCCTA 58.012 37.500 0.00 0.00 0.00 2.94
2809 3327 6.413892 TCATGCACACAAACTATGATCCTAA 58.586 36.000 0.00 0.00 0.00 2.69
2810 3328 6.539826 TCATGCACACAAACTATGATCCTAAG 59.460 38.462 0.00 0.00 0.00 2.18
2811 3329 5.185454 TGCACACAAACTATGATCCTAAGG 58.815 41.667 0.00 0.00 0.00 2.69
2812 3330 5.045942 TGCACACAAACTATGATCCTAAGGA 60.046 40.000 0.00 0.00 35.55 3.36
2813 3331 5.294552 GCACACAAACTATGATCCTAAGGAC 59.705 44.000 0.00 0.00 32.98 3.85
2814 3332 5.520288 CACACAAACTATGATCCTAAGGACG 59.480 44.000 0.00 0.00 32.98 4.79
2815 3333 5.050490 CACAAACTATGATCCTAAGGACGG 58.950 45.833 0.00 0.00 32.98 4.79
2816 3334 4.101119 ACAAACTATGATCCTAAGGACGGG 59.899 45.833 0.00 0.00 32.98 5.28
2817 3335 2.890814 ACTATGATCCTAAGGACGGGG 58.109 52.381 0.00 0.00 32.98 5.73
2818 3336 2.449730 ACTATGATCCTAAGGACGGGGA 59.550 50.000 0.00 0.00 32.98 4.81
2819 3337 2.723530 ATGATCCTAAGGACGGGGAT 57.276 50.000 0.00 0.00 41.90 3.85
2821 3339 1.268066 GATCCTAAGGACGGGGATCC 58.732 60.000 1.92 1.92 45.69 3.36
2822 3340 0.566176 ATCCTAAGGACGGGGATCCA 59.434 55.000 15.23 0.00 41.73 3.41
2823 3341 0.105658 TCCTAAGGACGGGGATCCAG 60.106 60.000 15.23 9.56 41.73 3.86
2824 3342 1.122019 CCTAAGGACGGGGATCCAGG 61.122 65.000 15.23 6.92 41.73 4.45
2825 3343 1.074775 TAAGGACGGGGATCCAGGG 60.075 63.158 15.23 4.15 41.73 4.45
2826 3344 2.615191 TAAGGACGGGGATCCAGGGG 62.615 65.000 15.23 1.43 41.73 4.79
2827 3345 4.492303 GGACGGGGATCCAGGGGA 62.492 72.222 15.23 0.00 38.77 4.81
2828 3346 2.366435 GACGGGGATCCAGGGGAA 60.366 66.667 15.23 0.00 34.34 3.97
2829 3347 1.999002 GACGGGGATCCAGGGGAAA 60.999 63.158 15.23 0.00 34.34 3.13
2830 3348 2.266816 GACGGGGATCCAGGGGAAAC 62.267 65.000 15.23 0.00 34.34 2.78
2831 3349 2.305607 CGGGGATCCAGGGGAAACA 61.306 63.158 15.23 0.00 34.34 2.83
2832 3350 1.645402 CGGGGATCCAGGGGAAACAT 61.645 60.000 15.23 0.00 34.34 2.71
2833 3351 0.186143 GGGGATCCAGGGGAAACATC 59.814 60.000 15.23 0.00 34.34 3.06
2834 3352 0.926293 GGGATCCAGGGGAAACATCA 59.074 55.000 15.23 0.00 34.34 3.07
2835 3353 1.410224 GGGATCCAGGGGAAACATCAC 60.410 57.143 15.23 0.00 34.34 3.06
2836 3354 1.284785 GGATCCAGGGGAAACATCACA 59.715 52.381 6.95 0.00 34.34 3.58
2837 3355 2.291540 GGATCCAGGGGAAACATCACAA 60.292 50.000 6.95 0.00 34.34 3.33
2838 3356 2.286365 TCCAGGGGAAACATCACAAC 57.714 50.000 0.00 0.00 0.00 3.32
2839 3357 1.203001 TCCAGGGGAAACATCACAACC 60.203 52.381 0.00 0.00 0.00 3.77
2840 3358 1.480312 CCAGGGGAAACATCACAACCA 60.480 52.381 0.00 0.00 0.00 3.67
2841 3359 1.613437 CAGGGGAAACATCACAACCAC 59.387 52.381 0.00 0.00 0.00 4.16
2842 3360 1.499007 AGGGGAAACATCACAACCACT 59.501 47.619 0.00 0.00 0.00 4.00
2843 3361 1.886542 GGGGAAACATCACAACCACTC 59.113 52.381 0.00 0.00 0.00 3.51
2963 3481 3.561143 TGAAACTTAAAGCAGGCCTGAA 58.439 40.909 37.21 19.95 0.00 3.02
3072 3602 0.751452 GGAGGGGACGTCTCATAACC 59.249 60.000 18.98 4.75 43.53 2.85
3137 3678 1.294780 CGCTCCTTTCTGCCTCACT 59.705 57.895 0.00 0.00 0.00 3.41
3258 3800 3.706373 GCCGGGCTCCAGAACTCA 61.706 66.667 12.87 0.00 0.00 3.41
3300 3842 4.697756 CGAGCGCTGTCCCCCAAA 62.698 66.667 18.48 0.00 0.00 3.28
3316 3858 1.304381 AAATGCTGTCGGCCACCAT 60.304 52.632 2.24 0.00 40.92 3.55
3393 3938 3.064987 GCTCAAGGGCTCGACGCTA 62.065 63.158 6.78 0.00 41.51 4.26
3501 4048 2.037367 CGTCCTCCTCCACCTCCA 59.963 66.667 0.00 0.00 0.00 3.86
3564 4111 3.080121 CCGGCTCCTCCTCTGCTT 61.080 66.667 0.00 0.00 0.00 3.91
3566 4113 2.057408 CGGCTCCTCCTCTGCTTCT 61.057 63.158 0.00 0.00 0.00 2.85
3581 4128 1.905894 GCTTCTCCACCTCTCTCCTTT 59.094 52.381 0.00 0.00 0.00 3.11
3607 4154 1.348696 GGGGTTTTCACCTCGACCTTA 59.651 52.381 0.00 0.00 43.65 2.69
3708 4261 5.011090 TCTTAGGCATGTGCTAGTACTTG 57.989 43.478 18.62 18.62 41.70 3.16
3709 4262 2.029838 AGGCATGTGCTAGTACTTGC 57.970 50.000 30.94 30.94 45.61 4.01
3720 4273 4.877823 TGCTAGTACTTGCTGGATTCAATG 59.122 41.667 25.89 0.00 32.65 2.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 6.323996 TCGTTGATGTAATGGTAGAAGAGGAT 59.676 38.462 0.00 0.00 0.00 3.24
9 10 6.811665 TGTTCGTTGATGTAATGGTAGAAGAG 59.188 38.462 0.00 0.00 0.00 2.85
90 95 0.902531 GAGATGGTCGGAAAGGTGGA 59.097 55.000 0.00 0.00 0.00 4.02
111 116 4.085009 TGGATCATAAATTGGTGTGTGCA 58.915 39.130 0.00 0.00 0.00 4.57
149 154 2.172717 AGCTACCCGGCTGAATGTTTAT 59.827 45.455 0.00 0.00 41.43 1.40
189 194 4.009675 GCAACCCAGACATGATGTTTCTA 58.990 43.478 0.00 0.00 0.00 2.10
200 205 1.514678 GCGAACATGCAACCCAGACA 61.515 55.000 0.00 0.00 34.15 3.41
274 279 6.093495 CCGGTCATCATGAAAGTTTTAAGCTA 59.907 38.462 0.00 0.00 0.00 3.32
393 403 7.257722 AGTTTTCTTTGTAAATCACCACTGTG 58.742 34.615 0.00 0.00 44.18 3.66
394 404 7.122055 TGAGTTTTCTTTGTAAATCACCACTGT 59.878 33.333 0.00 0.00 0.00 3.55
457 467 1.439679 CGTCCCCTGACTAACAAAGC 58.560 55.000 0.00 0.00 39.47 3.51
476 486 2.985116 GCCCTCCCTTCAGGTTCCC 61.985 68.421 0.00 0.00 36.75 3.97
584 597 5.123820 TGTTTTCTCGGAGGCAATATTCTTG 59.876 40.000 4.96 0.00 0.00 3.02
586 599 4.843728 TGTTTTCTCGGAGGCAATATTCT 58.156 39.130 4.96 0.00 0.00 2.40
593 606 0.034896 GTCCTGTTTTCTCGGAGGCA 59.965 55.000 4.96 0.00 0.00 4.75
603 616 3.452627 ACACACAGAGAGAGTCCTGTTTT 59.547 43.478 0.00 0.00 41.26 2.43
607 620 2.163412 GCTACACACAGAGAGAGTCCTG 59.837 54.545 0.00 0.00 36.53 3.86
608 621 2.224892 TGCTACACACAGAGAGAGTCCT 60.225 50.000 0.00 0.00 0.00 3.85
609 622 2.163412 CTGCTACACACAGAGAGAGTCC 59.837 54.545 0.00 0.00 37.32 3.85
610 623 2.817258 ACTGCTACACACAGAGAGAGTC 59.183 50.000 0.00 0.00 38.55 3.36
611 624 2.817258 GACTGCTACACACAGAGAGAGT 59.183 50.000 0.00 0.00 38.55 3.24
612 625 3.081061 AGACTGCTACACACAGAGAGAG 58.919 50.000 0.00 0.00 38.55 3.20
613 626 3.078097 GAGACTGCTACACACAGAGAGA 58.922 50.000 0.00 0.00 38.55 3.10
614 627 3.081061 AGAGACTGCTACACACAGAGAG 58.919 50.000 0.00 0.00 38.55 3.20
615 628 2.816672 CAGAGACTGCTACACACAGAGA 59.183 50.000 0.00 0.00 38.55 3.10
616 629 2.816672 TCAGAGACTGCTACACACAGAG 59.183 50.000 0.00 0.00 38.55 3.35
617 630 2.863809 TCAGAGACTGCTACACACAGA 58.136 47.619 0.00 0.00 38.55 3.41
618 631 3.005261 AGTTCAGAGACTGCTACACACAG 59.995 47.826 0.00 0.00 41.08 3.66
619 632 2.959030 AGTTCAGAGACTGCTACACACA 59.041 45.455 0.00 0.00 0.00 3.72
620 633 3.651803 AGTTCAGAGACTGCTACACAC 57.348 47.619 0.00 0.00 0.00 3.82
621 634 3.759086 CCTAGTTCAGAGACTGCTACACA 59.241 47.826 0.00 0.00 0.00 3.72
622 635 4.011023 TCCTAGTTCAGAGACTGCTACAC 58.989 47.826 0.00 0.00 0.00 2.90
623 636 4.302559 TCCTAGTTCAGAGACTGCTACA 57.697 45.455 0.00 0.00 0.00 2.74
624 637 6.544564 ACTTATCCTAGTTCAGAGACTGCTAC 59.455 42.308 0.00 0.00 0.00 3.58
625 638 6.544197 CACTTATCCTAGTTCAGAGACTGCTA 59.456 42.308 0.00 0.00 0.00 3.49
626 639 5.359576 CACTTATCCTAGTTCAGAGACTGCT 59.640 44.000 0.00 0.00 0.00 4.24
627 640 5.126384 ACACTTATCCTAGTTCAGAGACTGC 59.874 44.000 0.00 0.00 0.00 4.40
628 641 6.767524 ACACTTATCCTAGTTCAGAGACTG 57.232 41.667 0.00 0.00 0.00 3.51
629 642 6.722129 ACAACACTTATCCTAGTTCAGAGACT 59.278 38.462 0.00 0.00 0.00 3.24
630 643 6.926313 ACAACACTTATCCTAGTTCAGAGAC 58.074 40.000 0.00 0.00 0.00 3.36
631 644 7.540474 AACAACACTTATCCTAGTTCAGAGA 57.460 36.000 0.00 0.00 0.00 3.10
632 645 8.608844 AAAACAACACTTATCCTAGTTCAGAG 57.391 34.615 0.00 0.00 0.00 3.35
633 646 7.384115 CGAAAACAACACTTATCCTAGTTCAGA 59.616 37.037 0.00 0.00 0.00 3.27
634 647 7.170998 ACGAAAACAACACTTATCCTAGTTCAG 59.829 37.037 0.00 0.00 0.00 3.02
635 648 6.987992 ACGAAAACAACACTTATCCTAGTTCA 59.012 34.615 0.00 0.00 0.00 3.18
636 649 7.384387 AGACGAAAACAACACTTATCCTAGTTC 59.616 37.037 0.00 0.00 0.00 3.01
637 650 7.215085 AGACGAAAACAACACTTATCCTAGTT 58.785 34.615 0.00 0.00 0.00 2.24
638 651 6.756221 AGACGAAAACAACACTTATCCTAGT 58.244 36.000 0.00 0.00 0.00 2.57
639 652 7.653767 AAGACGAAAACAACACTTATCCTAG 57.346 36.000 0.00 0.00 0.00 3.02
640 653 8.441312 AAAAGACGAAAACAACACTTATCCTA 57.559 30.769 0.00 0.00 0.00 2.94
641 654 6.937436 AAAGACGAAAACAACACTTATCCT 57.063 33.333 0.00 0.00 0.00 3.24
642 655 7.980742 AAAAAGACGAAAACAACACTTATCC 57.019 32.000 0.00 0.00 0.00 2.59
666 679 7.001674 TCCTTCCTTATGCAACACTAGAAAAA 58.998 34.615 0.00 0.00 0.00 1.94
667 680 6.539173 TCCTTCCTTATGCAACACTAGAAAA 58.461 36.000 0.00 0.00 0.00 2.29
668 681 6.121776 TCCTTCCTTATGCAACACTAGAAA 57.878 37.500 0.00 0.00 0.00 2.52
669 682 5.755409 TCCTTCCTTATGCAACACTAGAA 57.245 39.130 0.00 0.00 0.00 2.10
670 683 5.734720 CTTCCTTCCTTATGCAACACTAGA 58.265 41.667 0.00 0.00 0.00 2.43
671 684 4.333926 GCTTCCTTCCTTATGCAACACTAG 59.666 45.833 0.00 0.00 0.00 2.57
672 685 4.019321 AGCTTCCTTCCTTATGCAACACTA 60.019 41.667 0.00 0.00 0.00 2.74
673 686 3.084786 GCTTCCTTCCTTATGCAACACT 58.915 45.455 0.00 0.00 0.00 3.55
674 687 3.084786 AGCTTCCTTCCTTATGCAACAC 58.915 45.455 0.00 0.00 0.00 3.32
675 688 3.347216 GAGCTTCCTTCCTTATGCAACA 58.653 45.455 0.00 0.00 0.00 3.33
676 689 2.352960 CGAGCTTCCTTCCTTATGCAAC 59.647 50.000 0.00 0.00 0.00 4.17
677 690 2.027192 ACGAGCTTCCTTCCTTATGCAA 60.027 45.455 0.00 0.00 0.00 4.08
678 691 1.555075 ACGAGCTTCCTTCCTTATGCA 59.445 47.619 0.00 0.00 0.00 3.96
679 692 1.936547 CACGAGCTTCCTTCCTTATGC 59.063 52.381 0.00 0.00 0.00 3.14
680 693 3.526931 TCACGAGCTTCCTTCCTTATG 57.473 47.619 0.00 0.00 0.00 1.90
681 694 4.162320 TGATTCACGAGCTTCCTTCCTTAT 59.838 41.667 0.00 0.00 0.00 1.73
682 695 3.513912 TGATTCACGAGCTTCCTTCCTTA 59.486 43.478 0.00 0.00 0.00 2.69
683 696 2.303022 TGATTCACGAGCTTCCTTCCTT 59.697 45.455 0.00 0.00 0.00 3.36
684 697 1.902508 TGATTCACGAGCTTCCTTCCT 59.097 47.619 0.00 0.00 0.00 3.36
685 698 2.003301 GTGATTCACGAGCTTCCTTCC 58.997 52.381 0.13 0.00 0.00 3.46
686 699 2.413453 GTGTGATTCACGAGCTTCCTTC 59.587 50.000 11.97 0.00 37.14 3.46
687 700 2.417719 GTGTGATTCACGAGCTTCCTT 58.582 47.619 11.97 0.00 37.14 3.36
688 701 2.086054 GTGTGATTCACGAGCTTCCT 57.914 50.000 11.97 0.00 37.14 3.36
700 713 5.009631 TCCATCAAAAGAATCCGTGTGATT 58.990 37.500 0.00 0.00 46.46 2.57
701 714 4.588899 TCCATCAAAAGAATCCGTGTGAT 58.411 39.130 0.00 0.00 34.22 3.06
702 715 4.002982 CTCCATCAAAAGAATCCGTGTGA 58.997 43.478 0.00 0.00 0.00 3.58
703 716 4.002982 TCTCCATCAAAAGAATCCGTGTG 58.997 43.478 0.00 0.00 0.00 3.82
704 717 4.286297 TCTCCATCAAAAGAATCCGTGT 57.714 40.909 0.00 0.00 0.00 4.49
705 718 4.437930 GCTTCTCCATCAAAAGAATCCGTG 60.438 45.833 0.00 0.00 31.45 4.94
706 719 3.691609 GCTTCTCCATCAAAAGAATCCGT 59.308 43.478 0.00 0.00 31.45 4.69
707 720 3.691118 TGCTTCTCCATCAAAAGAATCCG 59.309 43.478 0.00 0.00 31.45 4.18
708 721 5.649782 TTGCTTCTCCATCAAAAGAATCC 57.350 39.130 0.00 0.00 31.45 3.01
709 722 5.866092 GGTTTGCTTCTCCATCAAAAGAATC 59.134 40.000 0.00 0.00 32.36 2.52
710 723 5.279657 GGGTTTGCTTCTCCATCAAAAGAAT 60.280 40.000 0.00 0.00 32.36 2.40
711 724 4.039124 GGGTTTGCTTCTCCATCAAAAGAA 59.961 41.667 0.00 0.00 32.36 2.52
712 725 3.573967 GGGTTTGCTTCTCCATCAAAAGA 59.426 43.478 0.00 0.00 32.36 2.52
713 726 3.612479 CGGGTTTGCTTCTCCATCAAAAG 60.612 47.826 0.00 0.00 32.36 2.27
714 727 2.295909 CGGGTTTGCTTCTCCATCAAAA 59.704 45.455 0.00 0.00 32.36 2.44
715 728 1.885887 CGGGTTTGCTTCTCCATCAAA 59.114 47.619 0.00 0.00 0.00 2.69
716 729 1.202879 ACGGGTTTGCTTCTCCATCAA 60.203 47.619 0.00 0.00 0.00 2.57
717 730 0.400213 ACGGGTTTGCTTCTCCATCA 59.600 50.000 0.00 0.00 0.00 3.07
718 731 1.534729 AACGGGTTTGCTTCTCCATC 58.465 50.000 0.00 0.00 0.00 3.51
719 732 2.817844 GTTAACGGGTTTGCTTCTCCAT 59.182 45.455 0.00 0.00 0.00 3.41
720 733 2.158726 AGTTAACGGGTTTGCTTCTCCA 60.159 45.455 0.00 0.00 0.00 3.86
721 734 2.225727 CAGTTAACGGGTTTGCTTCTCC 59.774 50.000 0.00 0.00 0.00 3.71
722 735 2.876550 ACAGTTAACGGGTTTGCTTCTC 59.123 45.455 10.55 0.00 0.00 2.87
723 736 2.876550 GACAGTTAACGGGTTTGCTTCT 59.123 45.455 10.55 0.00 0.00 2.85
724 737 2.614983 TGACAGTTAACGGGTTTGCTTC 59.385 45.455 10.55 0.00 0.00 3.86
725 738 2.356695 GTGACAGTTAACGGGTTTGCTT 59.643 45.455 10.55 0.00 0.00 3.91
726 739 1.944709 GTGACAGTTAACGGGTTTGCT 59.055 47.619 10.55 0.00 0.00 3.91
727 740 1.944709 AGTGACAGTTAACGGGTTTGC 59.055 47.619 10.55 3.66 0.00 3.68
728 741 3.185797 GCTAGTGACAGTTAACGGGTTTG 59.814 47.826 10.55 0.70 0.00 2.93
729 742 3.396560 GCTAGTGACAGTTAACGGGTTT 58.603 45.455 10.55 2.28 0.00 3.27
730 743 2.289257 GGCTAGTGACAGTTAACGGGTT 60.289 50.000 10.55 0.00 0.00 4.11
731 744 1.274447 GGCTAGTGACAGTTAACGGGT 59.726 52.381 10.55 8.07 0.00 5.28
732 745 1.549170 AGGCTAGTGACAGTTAACGGG 59.451 52.381 10.55 4.87 0.00 5.28
733 746 2.029290 ACAGGCTAGTGACAGTTAACGG 60.029 50.000 4.05 4.05 0.00 4.44
734 747 2.987149 CACAGGCTAGTGACAGTTAACG 59.013 50.000 10.37 0.00 42.05 3.18
735 748 3.326747 CCACAGGCTAGTGACAGTTAAC 58.673 50.000 15.61 0.00 42.05 2.01
736 749 2.301870 CCCACAGGCTAGTGACAGTTAA 59.698 50.000 15.61 0.00 42.05 2.01
737 750 1.899814 CCCACAGGCTAGTGACAGTTA 59.100 52.381 15.61 0.00 42.05 2.24
738 751 0.687354 CCCACAGGCTAGTGACAGTT 59.313 55.000 15.61 0.00 42.05 3.16
739 752 2.366469 CCCACAGGCTAGTGACAGT 58.634 57.895 15.61 0.00 42.05 3.55
764 777 2.148558 GATCTCTCGGGCGATGTCCC 62.149 65.000 0.00 0.00 43.02 4.46
765 778 1.287503 GATCTCTCGGGCGATGTCC 59.712 63.158 0.00 0.00 0.00 4.02
766 779 1.175983 AGGATCTCTCGGGCGATGTC 61.176 60.000 0.00 0.00 0.00 3.06
767 780 0.110678 TAGGATCTCTCGGGCGATGT 59.889 55.000 0.00 0.00 0.00 3.06
768 781 0.808125 CTAGGATCTCTCGGGCGATG 59.192 60.000 0.00 0.00 0.00 3.84
769 782 0.963355 GCTAGGATCTCTCGGGCGAT 60.963 60.000 0.00 0.00 0.00 4.58
770 783 1.601197 GCTAGGATCTCTCGGGCGA 60.601 63.158 0.00 0.00 0.00 5.54
771 784 2.631580 GGCTAGGATCTCTCGGGCG 61.632 68.421 0.00 0.00 0.00 6.13
772 785 1.531840 TGGCTAGGATCTCTCGGGC 60.532 63.158 0.00 0.00 0.00 6.13
773 786 0.178975 AGTGGCTAGGATCTCTCGGG 60.179 60.000 0.00 0.00 0.00 5.14
774 787 2.570415 TAGTGGCTAGGATCTCTCGG 57.430 55.000 0.00 0.00 0.00 4.63
775 788 2.817258 CCTTAGTGGCTAGGATCTCTCG 59.183 54.545 0.00 0.00 0.00 4.04
788 801 3.016736 CCATTGTACAAGGCCTTAGTGG 58.983 50.000 20.00 15.08 39.35 4.00
789 802 3.016736 CCCATTGTACAAGGCCTTAGTG 58.983 50.000 20.00 9.88 0.00 2.74
790 803 2.916934 TCCCATTGTACAAGGCCTTAGT 59.083 45.455 20.00 19.91 0.00 2.24
791 804 3.545703 CTCCCATTGTACAAGGCCTTAG 58.454 50.000 20.00 15.05 0.00 2.18
792 805 2.241176 CCTCCCATTGTACAAGGCCTTA 59.759 50.000 20.00 1.64 0.00 2.69
793 806 1.005924 CCTCCCATTGTACAAGGCCTT 59.994 52.381 13.78 13.78 0.00 4.35
794 807 0.625849 CCTCCCATTGTACAAGGCCT 59.374 55.000 14.66 0.00 0.00 5.19
795 808 0.331616 ACCTCCCATTGTACAAGGCC 59.668 55.000 14.66 0.00 0.00 5.19
796 809 1.463674 CACCTCCCATTGTACAAGGC 58.536 55.000 14.66 0.00 0.00 4.35
797 810 1.004745 AGCACCTCCCATTGTACAAGG 59.995 52.381 14.65 13.92 0.00 3.61
798 811 2.496899 AGCACCTCCCATTGTACAAG 57.503 50.000 14.65 6.30 0.00 3.16
799 812 2.969821 AAGCACCTCCCATTGTACAA 57.030 45.000 11.41 11.41 0.00 2.41
800 813 3.178046 TCTAAGCACCTCCCATTGTACA 58.822 45.455 0.00 0.00 0.00 2.90
801 814 3.432326 CCTCTAAGCACCTCCCATTGTAC 60.432 52.174 0.00 0.00 0.00 2.90
802 815 2.771943 CCTCTAAGCACCTCCCATTGTA 59.228 50.000 0.00 0.00 0.00 2.41
803 816 1.561542 CCTCTAAGCACCTCCCATTGT 59.438 52.381 0.00 0.00 0.00 2.71
804 817 1.133976 CCCTCTAAGCACCTCCCATTG 60.134 57.143 0.00 0.00 0.00 2.82
805 818 1.216990 CCCTCTAAGCACCTCCCATT 58.783 55.000 0.00 0.00 0.00 3.16
806 819 0.695803 CCCCTCTAAGCACCTCCCAT 60.696 60.000 0.00 0.00 0.00 4.00
807 820 1.306997 CCCCTCTAAGCACCTCCCA 60.307 63.158 0.00 0.00 0.00 4.37
808 821 1.307084 ACCCCTCTAAGCACCTCCC 60.307 63.158 0.00 0.00 0.00 4.30
809 822 1.908483 CACCCCTCTAAGCACCTCC 59.092 63.158 0.00 0.00 0.00 4.30
810 823 1.222113 GCACCCCTCTAAGCACCTC 59.778 63.158 0.00 0.00 0.00 3.85
811 824 0.842467 AAGCACCCCTCTAAGCACCT 60.842 55.000 0.00 0.00 0.00 4.00
812 825 0.909623 TAAGCACCCCTCTAAGCACC 59.090 55.000 0.00 0.00 0.00 5.01
813 826 1.831736 TCTAAGCACCCCTCTAAGCAC 59.168 52.381 0.00 0.00 0.00 4.40
814 827 2.247699 TCTAAGCACCCCTCTAAGCA 57.752 50.000 0.00 0.00 0.00 3.91
815 828 3.629142 TTTCTAAGCACCCCTCTAAGC 57.371 47.619 0.00 0.00 0.00 3.09
816 829 8.459635 GTTTATTTTTCTAAGCACCCCTCTAAG 58.540 37.037 0.00 0.00 0.00 2.18
817 830 7.395206 GGTTTATTTTTCTAAGCACCCCTCTAA 59.605 37.037 0.00 0.00 0.00 2.10
818 831 6.888088 GGTTTATTTTTCTAAGCACCCCTCTA 59.112 38.462 0.00 0.00 0.00 2.43
819 832 5.715279 GGTTTATTTTTCTAAGCACCCCTCT 59.285 40.000 0.00 0.00 0.00 3.69
820 833 5.392703 CGGTTTATTTTTCTAAGCACCCCTC 60.393 44.000 0.00 0.00 0.00 4.30
821 834 4.461431 CGGTTTATTTTTCTAAGCACCCCT 59.539 41.667 0.00 0.00 0.00 4.79
822 835 4.381185 CCGGTTTATTTTTCTAAGCACCCC 60.381 45.833 0.00 0.00 0.00 4.95
823 836 4.381185 CCCGGTTTATTTTTCTAAGCACCC 60.381 45.833 0.00 0.00 0.00 4.61
824 837 4.219070 ACCCGGTTTATTTTTCTAAGCACC 59.781 41.667 0.00 0.00 0.00 5.01
825 838 5.381174 ACCCGGTTTATTTTTCTAAGCAC 57.619 39.130 0.00 0.00 0.00 4.40
826 839 6.408107 AAACCCGGTTTATTTTTCTAAGCA 57.592 33.333 14.16 0.00 33.70 3.91
827 840 7.718272 AAAAACCCGGTTTATTTTTCTAAGC 57.282 32.000 16.03 0.00 34.43 3.09
832 845 8.277713 GCTTTAGAAAAACCCGGTTTATTTTTC 58.722 33.333 22.79 22.79 45.95 2.29
833 846 7.769507 TGCTTTAGAAAAACCCGGTTTATTTTT 59.230 29.630 16.03 6.68 38.03 1.94
834 847 7.273712 TGCTTTAGAAAAACCCGGTTTATTTT 58.726 30.769 16.03 7.04 34.43 1.82
835 848 6.818233 TGCTTTAGAAAAACCCGGTTTATTT 58.182 32.000 16.03 7.76 34.43 1.40
836 849 6.408107 TGCTTTAGAAAAACCCGGTTTATT 57.592 33.333 16.03 11.90 34.43 1.40
837 850 6.599356 ATGCTTTAGAAAAACCCGGTTTAT 57.401 33.333 16.03 8.03 34.43 1.40
838 851 5.335035 CGATGCTTTAGAAAAACCCGGTTTA 60.335 40.000 16.03 0.00 34.43 2.01
839 852 4.557895 CGATGCTTTAGAAAAACCCGGTTT 60.558 41.667 9.92 9.92 37.34 3.27
840 853 3.057806 CGATGCTTTAGAAAAACCCGGTT 60.058 43.478 0.00 0.00 0.00 4.44
841 854 2.486592 CGATGCTTTAGAAAAACCCGGT 59.513 45.455 0.00 0.00 0.00 5.28
842 855 2.159435 CCGATGCTTTAGAAAAACCCGG 60.159 50.000 0.00 0.00 0.00 5.73
843 856 2.486592 ACCGATGCTTTAGAAAAACCCG 59.513 45.455 0.00 0.00 0.00 5.28
844 857 3.504520 TCACCGATGCTTTAGAAAAACCC 59.495 43.478 0.00 0.00 0.00 4.11
845 858 4.723248 CTCACCGATGCTTTAGAAAAACC 58.277 43.478 0.00 0.00 0.00 3.27
846 859 4.159120 GCTCACCGATGCTTTAGAAAAAC 58.841 43.478 0.00 0.00 0.00 2.43
847 860 3.120338 CGCTCACCGATGCTTTAGAAAAA 60.120 43.478 0.00 0.00 40.02 1.94
848 861 2.415168 CGCTCACCGATGCTTTAGAAAA 59.585 45.455 0.00 0.00 40.02 2.29
849 862 1.999735 CGCTCACCGATGCTTTAGAAA 59.000 47.619 0.00 0.00 40.02 2.52
850 863 1.067142 ACGCTCACCGATGCTTTAGAA 60.067 47.619 0.00 0.00 41.02 2.10
851 864 0.530744 ACGCTCACCGATGCTTTAGA 59.469 50.000 0.00 0.00 41.02 2.10
852 865 0.924090 GACGCTCACCGATGCTTTAG 59.076 55.000 0.00 0.00 41.02 1.85
853 866 0.530744 AGACGCTCACCGATGCTTTA 59.469 50.000 0.00 0.00 41.02 1.85
854 867 0.737715 GAGACGCTCACCGATGCTTT 60.738 55.000 2.53 0.00 41.02 3.51
855 868 1.153745 GAGACGCTCACCGATGCTT 60.154 57.895 2.53 0.00 41.02 3.91
856 869 1.999071 GAGAGACGCTCACCGATGCT 61.999 60.000 0.78 0.00 43.38 3.79
857 870 1.587613 GAGAGACGCTCACCGATGC 60.588 63.158 0.78 0.00 43.38 3.91
858 871 4.700037 GAGAGACGCTCACCGATG 57.300 61.111 0.78 0.00 43.38 3.84
865 878 5.457140 CCTATTTCTACATGAGAGACGCTC 58.543 45.833 0.00 0.00 44.21 5.03
866 879 4.261825 GCCTATTTCTACATGAGAGACGCT 60.262 45.833 0.00 0.00 34.93 5.07
867 880 3.984633 GCCTATTTCTACATGAGAGACGC 59.015 47.826 0.00 0.00 34.93 5.19
868 881 5.188327 TGCCTATTTCTACATGAGAGACG 57.812 43.478 0.00 0.00 34.93 4.18
869 882 6.426328 CCAATGCCTATTTCTACATGAGAGAC 59.574 42.308 0.00 0.00 34.93 3.36
870 883 6.100279 ACCAATGCCTATTTCTACATGAGAGA 59.900 38.462 0.00 0.00 34.93 3.10
871 884 6.204301 CACCAATGCCTATTTCTACATGAGAG 59.796 42.308 0.00 0.00 34.93 3.20
872 885 6.057533 CACCAATGCCTATTTCTACATGAGA 58.942 40.000 0.00 0.00 0.00 3.27
873 886 5.824624 ACACCAATGCCTATTTCTACATGAG 59.175 40.000 0.00 0.00 0.00 2.90
874 887 5.754782 ACACCAATGCCTATTTCTACATGA 58.245 37.500 0.00 0.00 0.00 3.07
875 888 6.455360 AACACCAATGCCTATTTCTACATG 57.545 37.500 0.00 0.00 0.00 3.21
876 889 7.480760 AAAACACCAATGCCTATTTCTACAT 57.519 32.000 0.00 0.00 0.00 2.29
877 890 6.909550 AAAACACCAATGCCTATTTCTACA 57.090 33.333 0.00 0.00 0.00 2.74
878 891 8.276252 TCTAAAACACCAATGCCTATTTCTAC 57.724 34.615 0.00 0.00 0.00 2.59
879 892 8.871629 TTCTAAAACACCAATGCCTATTTCTA 57.128 30.769 0.00 0.00 0.00 2.10
880 893 7.775053 TTCTAAAACACCAATGCCTATTTCT 57.225 32.000 0.00 0.00 0.00 2.52
881 894 8.825667 TTTTCTAAAACACCAATGCCTATTTC 57.174 30.769 0.00 0.00 0.00 2.17
882 895 9.791801 ATTTTTCTAAAACACCAATGCCTATTT 57.208 25.926 0.00 0.00 0.00 1.40
883 896 9.435688 GATTTTTCTAAAACACCAATGCCTATT 57.564 29.630 0.00 0.00 0.00 1.73
884 897 8.040727 GGATTTTTCTAAAACACCAATGCCTAT 58.959 33.333 0.00 0.00 0.00 2.57
885 898 7.382898 GGATTTTTCTAAAACACCAATGCCTA 58.617 34.615 0.00 0.00 0.00 3.93
886 899 6.230472 GGATTTTTCTAAAACACCAATGCCT 58.770 36.000 0.00 0.00 0.00 4.75
887 900 5.120053 CGGATTTTTCTAAAACACCAATGCC 59.880 40.000 0.00 0.00 0.00 4.40
888 901 5.923684 TCGGATTTTTCTAAAACACCAATGC 59.076 36.000 0.00 0.00 0.00 3.56
889 902 8.532977 AATCGGATTTTTCTAAAACACCAATG 57.467 30.769 0.00 0.00 0.00 2.82
904 917 9.366216 GGTGCTTAGAAAAATAAATCGGATTTT 57.634 29.630 20.04 3.78 37.96 1.82
905 918 8.749354 AGGTGCTTAGAAAAATAAATCGGATTT 58.251 29.630 18.97 18.97 36.29 2.17
906 919 8.293699 AGGTGCTTAGAAAAATAAATCGGATT 57.706 30.769 0.00 0.00 0.00 3.01
907 920 7.775561 AGAGGTGCTTAGAAAAATAAATCGGAT 59.224 33.333 0.00 0.00 0.00 4.18
908 921 7.110155 AGAGGTGCTTAGAAAAATAAATCGGA 58.890 34.615 0.00 0.00 0.00 4.55
909 922 7.281100 AGAGAGGTGCTTAGAAAAATAAATCGG 59.719 37.037 0.00 0.00 0.00 4.18
910 923 8.202745 AGAGAGGTGCTTAGAAAAATAAATCG 57.797 34.615 0.00 0.00 0.00 3.34
913 926 8.947115 GCTTAGAGAGGTGCTTAGAAAAATAAA 58.053 33.333 0.00 0.00 0.00 1.40
914 927 8.100791 TGCTTAGAGAGGTGCTTAGAAAAATAA 58.899 33.333 0.00 0.00 0.00 1.40
915 928 7.549488 GTGCTTAGAGAGGTGCTTAGAAAAATA 59.451 37.037 0.00 0.00 0.00 1.40
916 929 6.372937 GTGCTTAGAGAGGTGCTTAGAAAAAT 59.627 38.462 0.00 0.00 0.00 1.82
917 930 5.701290 GTGCTTAGAGAGGTGCTTAGAAAAA 59.299 40.000 0.00 0.00 0.00 1.94
918 931 5.238583 GTGCTTAGAGAGGTGCTTAGAAAA 58.761 41.667 0.00 0.00 0.00 2.29
919 932 4.322801 GGTGCTTAGAGAGGTGCTTAGAAA 60.323 45.833 0.00 0.00 0.00 2.52
920 933 3.195825 GGTGCTTAGAGAGGTGCTTAGAA 59.804 47.826 0.00 0.00 0.00 2.10
921 934 2.761208 GGTGCTTAGAGAGGTGCTTAGA 59.239 50.000 0.00 0.00 0.00 2.10
922 935 2.763448 AGGTGCTTAGAGAGGTGCTTAG 59.237 50.000 0.00 0.00 0.00 2.18
923 936 2.761208 GAGGTGCTTAGAGAGGTGCTTA 59.239 50.000 0.00 0.00 0.00 3.09
924 937 1.552792 GAGGTGCTTAGAGAGGTGCTT 59.447 52.381 0.00 0.00 0.00 3.91
925 938 1.190643 GAGGTGCTTAGAGAGGTGCT 58.809 55.000 0.00 0.00 0.00 4.40
926 939 0.176910 GGAGGTGCTTAGAGAGGTGC 59.823 60.000 0.00 0.00 0.00 5.01
927 940 0.827368 GGGAGGTGCTTAGAGAGGTG 59.173 60.000 0.00 0.00 0.00 4.00
928 941 0.413832 TGGGAGGTGCTTAGAGAGGT 59.586 55.000 0.00 0.00 0.00 3.85
929 942 1.799933 ATGGGAGGTGCTTAGAGAGG 58.200 55.000 0.00 0.00 0.00 3.69
930 943 2.503356 ACAATGGGAGGTGCTTAGAGAG 59.497 50.000 0.00 0.00 0.00 3.20
931 944 2.551270 ACAATGGGAGGTGCTTAGAGA 58.449 47.619 0.00 0.00 0.00 3.10
932 945 3.197766 TGTACAATGGGAGGTGCTTAGAG 59.802 47.826 0.00 0.00 0.00 2.43
933 946 3.178046 TGTACAATGGGAGGTGCTTAGA 58.822 45.455 0.00 0.00 0.00 2.10
934 947 3.627395 TGTACAATGGGAGGTGCTTAG 57.373 47.619 0.00 0.00 0.00 2.18
935 948 3.872240 GCTTGTACAATGGGAGGTGCTTA 60.872 47.826 9.13 0.00 0.00 3.09
936 949 2.795329 CTTGTACAATGGGAGGTGCTT 58.205 47.619 9.13 0.00 0.00 3.91
937 950 1.614317 GCTTGTACAATGGGAGGTGCT 60.614 52.381 9.13 0.00 0.00 4.40
938 951 0.811281 GCTTGTACAATGGGAGGTGC 59.189 55.000 9.13 2.55 0.00 5.01
939 952 1.463674 GGCTTGTACAATGGGAGGTG 58.536 55.000 9.13 0.00 0.00 4.00
940 953 0.331616 GGGCTTGTACAATGGGAGGT 59.668 55.000 9.13 0.00 0.00 3.85
941 954 0.625849 AGGGCTTGTACAATGGGAGG 59.374 55.000 9.13 0.00 0.00 4.30
942 955 3.644966 TTAGGGCTTGTACAATGGGAG 57.355 47.619 9.13 0.00 0.00 4.30
943 956 3.117663 GGATTAGGGCTTGTACAATGGGA 60.118 47.826 9.13 0.00 0.00 4.37
944 957 3.222603 GGATTAGGGCTTGTACAATGGG 58.777 50.000 9.13 0.00 0.00 4.00
945 958 2.878406 CGGATTAGGGCTTGTACAATGG 59.122 50.000 9.13 0.00 0.00 3.16
946 959 2.290641 GCGGATTAGGGCTTGTACAATG 59.709 50.000 9.13 4.83 0.00 2.82
947 960 2.092646 TGCGGATTAGGGCTTGTACAAT 60.093 45.455 9.13 0.00 0.00 2.71
948 961 1.279558 TGCGGATTAGGGCTTGTACAA 59.720 47.619 8.28 8.28 0.00 2.41
949 962 0.906066 TGCGGATTAGGGCTTGTACA 59.094 50.000 0.00 0.00 0.00 2.90
950 963 2.143925 GATGCGGATTAGGGCTTGTAC 58.856 52.381 0.00 0.00 0.00 2.90
951 964 1.765904 TGATGCGGATTAGGGCTTGTA 59.234 47.619 0.00 0.00 0.00 2.41
952 965 0.546122 TGATGCGGATTAGGGCTTGT 59.454 50.000 0.00 0.00 0.00 3.16
953 966 1.605710 CTTGATGCGGATTAGGGCTTG 59.394 52.381 0.00 0.00 0.00 4.01
954 967 1.972872 CTTGATGCGGATTAGGGCTT 58.027 50.000 0.00 0.00 0.00 4.35
955 968 0.536006 GCTTGATGCGGATTAGGGCT 60.536 55.000 0.00 0.00 0.00 5.19
956 969 1.518903 GGCTTGATGCGGATTAGGGC 61.519 60.000 1.55 1.55 44.05 5.19
957 970 0.179020 TGGCTTGATGCGGATTAGGG 60.179 55.000 0.00 0.00 44.05 3.53
958 971 1.808945 GATGGCTTGATGCGGATTAGG 59.191 52.381 0.00 0.00 44.05 2.69
959 972 2.497138 TGATGGCTTGATGCGGATTAG 58.503 47.619 0.00 0.00 44.05 1.73
960 973 2.618241 GTTGATGGCTTGATGCGGATTA 59.382 45.455 0.00 0.00 44.05 1.75
961 974 1.406539 GTTGATGGCTTGATGCGGATT 59.593 47.619 0.00 0.00 44.05 3.01
962 975 1.027357 GTTGATGGCTTGATGCGGAT 58.973 50.000 0.00 0.00 44.05 4.18
963 976 0.322366 TGTTGATGGCTTGATGCGGA 60.322 50.000 0.00 0.00 44.05 5.54
964 977 0.527113 TTGTTGATGGCTTGATGCGG 59.473 50.000 0.00 0.00 44.05 5.69
965 978 1.904144 CTTGTTGATGGCTTGATGCG 58.096 50.000 0.00 0.00 44.05 4.73
966 979 1.636988 GCTTGTTGATGGCTTGATGC 58.363 50.000 0.00 0.00 41.94 3.91
967 980 1.200716 ACGCTTGTTGATGGCTTGATG 59.799 47.619 0.00 0.00 0.00 3.07
968 981 1.470098 GACGCTTGTTGATGGCTTGAT 59.530 47.619 0.00 0.00 0.00 2.57
969 982 0.874390 GACGCTTGTTGATGGCTTGA 59.126 50.000 0.00 0.00 0.00 3.02
970 983 0.592637 TGACGCTTGTTGATGGCTTG 59.407 50.000 0.00 0.00 0.00 4.01
971 984 1.267806 CTTGACGCTTGTTGATGGCTT 59.732 47.619 0.00 0.00 0.00 4.35
972 985 0.877071 CTTGACGCTTGTTGATGGCT 59.123 50.000 0.00 0.00 0.00 4.75
973 986 0.730494 GCTTGACGCTTGTTGATGGC 60.730 55.000 0.00 0.00 35.14 4.40
974 987 0.453282 CGCTTGACGCTTGTTGATGG 60.453 55.000 0.00 0.00 36.13 3.51
1000 1013 2.202544 CTCGCCTCAGTCGCACTC 60.203 66.667 0.00 0.00 0.00 3.51
1008 1021 2.183811 CCTGCTGTCTCGCCTCAG 59.816 66.667 0.00 0.00 35.12 3.35
1172 1193 1.007607 GGATGGGGAGGGGAAGAAAA 58.992 55.000 0.00 0.00 0.00 2.29
1174 1195 1.308746 GGGATGGGGAGGGGAAGAA 60.309 63.158 0.00 0.00 0.00 2.52
1175 1196 2.376842 GGGATGGGGAGGGGAAGA 59.623 66.667 0.00 0.00 0.00 2.87
1176 1197 2.778717 GGGGATGGGGAGGGGAAG 60.779 72.222 0.00 0.00 0.00 3.46
1225 1246 3.503363 GATCGACCGTCCGTCCGT 61.503 66.667 0.00 0.00 38.36 4.69
1226 1247 4.586472 CGATCGACCGTCCGTCCG 62.586 72.222 10.26 0.00 38.36 4.79
1227 1248 2.909762 GAACGATCGACCGTCCGTCC 62.910 65.000 24.34 0.00 42.54 4.79
1228 1249 1.582168 GAACGATCGACCGTCCGTC 60.582 63.158 24.34 0.00 42.54 4.79
1316 1337 4.936685 AAGAAATGGAAGGGAGCTACTT 57.063 40.909 0.00 0.00 0.00 2.24
1369 1400 0.111253 AGTGTTCTTGGAAGCCCCTG 59.889 55.000 0.00 0.00 35.38 4.45
1441 1472 1.743394 GGGTTAGAAAGCACGGGATTG 59.257 52.381 0.00 0.00 0.00 2.67
1461 1497 6.756176 GCAAGAAGCGCTATGTATATAACAG 58.244 40.000 12.05 0.00 42.70 3.16
1522 1569 1.806542 CCCCAATCTGTTCGTTCACAG 59.193 52.381 5.99 5.99 44.96 3.66
1575 1632 4.406069 CAATTATGCCAGTTCTTCACACG 58.594 43.478 0.00 0.00 0.00 4.49
1592 1649 4.381079 GCTTAAAATGGTGACCCGCAATTA 60.381 41.667 0.00 0.00 0.00 1.40
1600 1657 3.438781 TCGTGATGCTTAAAATGGTGACC 59.561 43.478 0.00 0.00 0.00 4.02
1752 1829 0.460987 CTCTAACCTGGAGCTTGGCG 60.461 60.000 0.00 0.00 0.00 5.69
1775 1852 2.153913 GCACAAGGCAGACAGTACG 58.846 57.895 0.00 0.00 43.97 3.67
1942 2098 2.128035 CGATGTTAAGCCGTCATCTCC 58.872 52.381 0.00 0.00 36.72 3.71
1961 2126 5.924254 TGAAAGTTGTGGAGATGTTAGTACG 59.076 40.000 0.00 0.00 0.00 3.67
1965 2130 5.308825 AGGTGAAAGTTGTGGAGATGTTAG 58.691 41.667 0.00 0.00 0.00 2.34
1969 2134 4.580167 TGAAAGGTGAAAGTTGTGGAGATG 59.420 41.667 0.00 0.00 0.00 2.90
1970 2135 4.792068 TGAAAGGTGAAAGTTGTGGAGAT 58.208 39.130 0.00 0.00 0.00 2.75
2085 2476 1.069204 AGCTTTCTCTCGTTGCTGTGA 59.931 47.619 0.00 0.00 32.32 3.58
2160 2551 0.180171 TCATCATTTGCGACGGGGAT 59.820 50.000 0.00 0.00 0.00 3.85
2216 2607 4.721776 AGAAGGCAATAGGTATCAACTGGA 59.278 41.667 0.00 0.00 0.00 3.86
2226 2617 3.840666 TCAAGAGTCAGAAGGCAATAGGT 59.159 43.478 0.00 0.00 0.00 3.08
2234 2625 4.815533 TTCTGGATCAAGAGTCAGAAGG 57.184 45.455 0.00 0.00 40.13 3.46
2258 2649 6.679392 GCAGCACAAGAAAACTTAACCTAACA 60.679 38.462 0.00 0.00 0.00 2.41
2391 2800 7.254455 GGTTCACGTAATCAACCTGAATATGAG 60.254 40.741 9.53 0.00 36.13 2.90
2487 2897 8.925700 CAAAAGATTGTTATGGGCTAACTTTTC 58.074 33.333 0.00 0.00 40.40 2.29
2517 2928 1.743772 CGCCCTTATGTTCACCCTCTG 60.744 57.143 0.00 0.00 0.00 3.35
2533 2944 4.743644 CAGTTGTACTAGCTAATAACGCCC 59.256 45.833 0.00 0.00 0.00 6.13
2590 3097 8.288913 GCTAGAAAAGATATTGAGGAATGAAGC 58.711 37.037 0.00 0.00 0.00 3.86
2649 3157 9.688091 ATCTCAACTCTCTAGTACAAGTAATCA 57.312 33.333 0.00 0.00 33.75 2.57
2663 3171 4.348863 AAAGCACACATCTCAACTCTCT 57.651 40.909 0.00 0.00 0.00 3.10
2674 3182 3.573538 TGTAATGCAGGAAAAGCACACAT 59.426 39.130 0.00 0.00 45.95 3.21
2727 3239 2.891580 TCGATGTATCTCCTGGCCTTAC 59.108 50.000 3.32 0.00 0.00 2.34
2778 3296 6.654582 TCATAGTTTGTGTGCATGATACTGTT 59.345 34.615 0.00 0.00 0.00 3.16
2780 3298 6.667007 TCATAGTTTGTGTGCATGATACTG 57.333 37.500 0.00 0.00 0.00 2.74
2782 3300 6.484643 AGGATCATAGTTTGTGTGCATGATAC 59.515 38.462 0.00 0.00 36.67 2.24
2788 3306 5.045942 TCCTTAGGATCATAGTTTGTGTGCA 60.046 40.000 0.00 0.00 0.00 4.57
2803 3321 0.566176 TGGATCCCCGTCCTTAGGAT 59.434 55.000 9.90 0.00 43.18 3.24
2804 3322 0.105658 CTGGATCCCCGTCCTTAGGA 60.106 60.000 9.90 0.00 39.12 2.94
2805 3323 1.122019 CCTGGATCCCCGTCCTTAGG 61.122 65.000 9.90 2.40 39.12 2.69
2806 3324 1.122019 CCCTGGATCCCCGTCCTTAG 61.122 65.000 9.90 0.00 39.12 2.18
2807 3325 1.074775 CCCTGGATCCCCGTCCTTA 60.075 63.158 9.90 0.00 39.12 2.69
2808 3326 2.366972 CCCTGGATCCCCGTCCTT 60.367 66.667 9.90 0.00 39.12 3.36
2809 3327 4.499116 CCCCTGGATCCCCGTCCT 62.499 72.222 9.90 0.00 39.12 3.85
2810 3328 4.492303 TCCCCTGGATCCCCGTCC 62.492 72.222 9.90 0.00 38.81 4.79
2811 3329 1.999002 TTTCCCCTGGATCCCCGTC 60.999 63.158 9.90 0.00 34.29 4.79
2812 3330 2.126372 TTTCCCCTGGATCCCCGT 59.874 61.111 9.90 0.00 34.29 5.28
2813 3331 1.645402 ATGTTTCCCCTGGATCCCCG 61.645 60.000 9.90 0.00 34.29 5.73
2814 3332 0.186143 GATGTTTCCCCTGGATCCCC 59.814 60.000 9.90 0.00 0.00 4.81
2815 3333 0.926293 TGATGTTTCCCCTGGATCCC 59.074 55.000 9.90 0.00 0.00 3.85
2816 3334 1.284785 TGTGATGTTTCCCCTGGATCC 59.715 52.381 4.20 4.20 0.00 3.36
2817 3335 2.755103 GTTGTGATGTTTCCCCTGGATC 59.245 50.000 0.00 0.00 0.00 3.36
2818 3336 2.557452 GGTTGTGATGTTTCCCCTGGAT 60.557 50.000 0.00 0.00 0.00 3.41
2819 3337 1.203001 GGTTGTGATGTTTCCCCTGGA 60.203 52.381 0.00 0.00 0.00 3.86
2820 3338 1.256812 GGTTGTGATGTTTCCCCTGG 58.743 55.000 0.00 0.00 0.00 4.45
2821 3339 1.613437 GTGGTTGTGATGTTTCCCCTG 59.387 52.381 0.00 0.00 0.00 4.45
2822 3340 1.499007 AGTGGTTGTGATGTTTCCCCT 59.501 47.619 0.00 0.00 0.00 4.79
2823 3341 1.886542 GAGTGGTTGTGATGTTTCCCC 59.113 52.381 0.00 0.00 0.00 4.81
2824 3342 2.554032 CTGAGTGGTTGTGATGTTTCCC 59.446 50.000 0.00 0.00 0.00 3.97
2825 3343 2.554032 CCTGAGTGGTTGTGATGTTTCC 59.446 50.000 0.00 0.00 0.00 3.13
2826 3344 2.554032 CCCTGAGTGGTTGTGATGTTTC 59.446 50.000 0.00 0.00 0.00 2.78
2827 3345 2.586425 CCCTGAGTGGTTGTGATGTTT 58.414 47.619 0.00 0.00 0.00 2.83
2828 3346 1.819305 GCCCTGAGTGGTTGTGATGTT 60.819 52.381 0.00 0.00 0.00 2.71
2829 3347 0.250901 GCCCTGAGTGGTTGTGATGT 60.251 55.000 0.00 0.00 0.00 3.06
2830 3348 1.300971 CGCCCTGAGTGGTTGTGATG 61.301 60.000 0.00 0.00 0.00 3.07
2831 3349 1.003355 CGCCCTGAGTGGTTGTGAT 60.003 57.895 0.00 0.00 0.00 3.06
2832 3350 2.425592 CGCCCTGAGTGGTTGTGA 59.574 61.111 0.00 0.00 0.00 3.58
2833 3351 2.111043 ACGCCCTGAGTGGTTGTG 59.889 61.111 0.00 0.00 0.00 3.33
2834 3352 2.111043 CACGCCCTGAGTGGTTGT 59.889 61.111 0.00 0.00 36.06 3.32
2835 3353 1.101049 AAACACGCCCTGAGTGGTTG 61.101 55.000 0.40 0.00 46.46 3.77
2836 3354 1.226262 AAACACGCCCTGAGTGGTT 59.774 52.632 3.15 0.00 43.85 3.67
2837 3355 1.525995 CAAACACGCCCTGAGTGGT 60.526 57.895 3.15 0.00 41.97 4.16
2838 3356 2.260869 CCAAACACGCCCTGAGTGG 61.261 63.158 3.15 0.00 43.41 4.00
2839 3357 1.101049 AACCAAACACGCCCTGAGTG 61.101 55.000 0.00 0.00 44.57 3.51
2840 3358 1.101049 CAACCAAACACGCCCTGAGT 61.101 55.000 0.00 0.00 0.00 3.41
2841 3359 1.654220 CAACCAAACACGCCCTGAG 59.346 57.895 0.00 0.00 0.00 3.35
2842 3360 2.485795 GCAACCAAACACGCCCTGA 61.486 57.895 0.00 0.00 0.00 3.86
2843 3361 2.027460 GCAACCAAACACGCCCTG 59.973 61.111 0.00 0.00 0.00 4.45
2873 3391 3.697747 CCCGCACGGACCTGGTTA 61.698 66.667 11.42 0.00 37.50 2.85
2977 3495 2.437343 GCTCGCGAGAAACTGTCGG 61.437 63.158 38.74 10.41 41.32 4.79
2980 3509 1.373497 CAGGCTCGCGAGAAACTGT 60.373 57.895 38.74 12.87 41.32 3.55
3077 3607 0.610687 GGTGACAGAAGAGTGGGGAG 59.389 60.000 0.00 0.00 0.00 4.30
3078 3608 1.185618 CGGTGACAGAAGAGTGGGGA 61.186 60.000 0.00 0.00 0.00 4.81
3137 3678 0.336737 GAAGAGGAGAGGGAGGGACA 59.663 60.000 0.00 0.00 0.00 4.02
3216 3758 2.046023 CGCTCCTGGATGTTGGCA 60.046 61.111 0.00 0.00 0.00 4.92
3290 3832 1.303236 CGACAGCATTTGGGGGACA 60.303 57.895 0.00 0.00 0.00 4.02
3316 3858 4.776322 CGCATTGGCCGACCCTCA 62.776 66.667 0.00 0.00 36.38 3.86
3369 3914 2.973899 GAGCCCTTGAGCACGAGA 59.026 61.111 0.00 0.00 34.23 4.04
3494 4041 4.415150 ATGGCCACGCTGGAGGTG 62.415 66.667 8.16 0.00 40.96 4.00
3564 4111 1.617263 CGGAAAGGAGAGAGGTGGAGA 60.617 57.143 0.00 0.00 0.00 3.71
3566 4113 0.114560 ACGGAAAGGAGAGAGGTGGA 59.885 55.000 0.00 0.00 0.00 4.02
3581 4128 2.103339 GAGGTGAAAACCCCGACGGA 62.103 60.000 17.49 0.00 34.64 4.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.