Multiple sequence alignment - TraesCS4B01G358800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G358800 chr4B 100.000 6010 0 0 1 6010 649470110 649476119 0.000000e+00 11099.0
1 TraesCS4B01G358800 chr5A 91.283 5059 265 75 759 5711 688138312 688143300 0.000000e+00 6737.0
2 TraesCS4B01G358800 chr5A 90.395 531 31 10 12 536 688137221 688137737 0.000000e+00 680.0
3 TraesCS4B01G358800 chr4D 90.672 2112 113 44 1 2069 503616359 503618429 0.000000e+00 2732.0
4 TraesCS4B01G358800 chr4D 92.308 1768 80 23 3982 5711 503620684 503622433 0.000000e+00 2460.0
5 TraesCS4B01G358800 chr4D 92.727 1210 60 16 2708 3907 503619111 503620302 0.000000e+00 1722.0
6 TraesCS4B01G358800 chr4D 94.783 575 28 2 2018 2592 503618440 503619012 0.000000e+00 894.0
7 TraesCS4B01G358800 chr4D 97.297 37 1 0 678 714 450509612 450509576 5.030000e-06 63.9
8 TraesCS4B01G358800 chr3A 87.607 936 91 18 4081 5009 212113608 212112691 0.000000e+00 1062.0
9 TraesCS4B01G358800 chr3A 84.933 823 84 27 2639 3446 212114811 212114014 0.000000e+00 797.0
10 TraesCS4B01G358800 chr3A 87.885 454 55 0 2144 2597 212130537 212130084 8.870000e-148 534.0
11 TraesCS4B01G358800 chr3A 87.893 413 34 9 3491 3900 212114014 212113615 7.050000e-129 472.0
12 TraesCS4B01G358800 chr3A 90.141 213 15 3 426 636 92676489 92676281 7.680000e-69 272.0
13 TraesCS4B01G358800 chr3A 88.136 177 21 0 1501 1677 212131442 212131266 1.700000e-50 211.0
14 TraesCS4B01G358800 chr3A 86.331 139 17 2 1869 2006 265374128 265373991 3.750000e-32 150.0
15 TraesCS4B01G358800 chr3D 87.500 928 94 15 4086 5009 173709143 173708234 0.000000e+00 1051.0
16 TraesCS4B01G358800 chr3D 84.856 832 85 28 2631 3446 173710359 173709553 0.000000e+00 800.0
17 TraesCS4B01G358800 chr3D 88.326 454 53 0 2144 2597 173714112 173713659 4.100000e-151 545.0
18 TraesCS4B01G358800 chr3D 87.864 412 35 8 3491 3900 173709553 173709155 2.540000e-128 470.0
19 TraesCS4B01G358800 chr3D 78.501 814 102 41 1220 2011 501271450 501270688 3.280000e-127 466.0
20 TraesCS4B01G358800 chr3D 86.071 280 19 10 1741 2006 173714444 173714171 3.550000e-72 283.0
21 TraesCS4B01G358800 chr3B 87.218 931 94 18 4086 5009 252589550 252588638 0.000000e+00 1037.0
22 TraesCS4B01G358800 chr3B 84.615 832 87 28 2631 3446 252590766 252589960 0.000000e+00 789.0
23 TraesCS4B01G358800 chr3B 88.106 454 54 0 2144 2597 252594622 252594169 1.910000e-149 540.0
24 TraesCS4B01G358800 chr3B 87.864 412 35 8 3491 3900 252589960 252589562 2.540000e-128 470.0
25 TraesCS4B01G358800 chr3B 86.071 280 19 11 1741 2006 252594954 252594681 3.550000e-72 283.0
26 TraesCS4B01G358800 chr6A 89.945 547 48 4 4571 5117 609055862 609056401 0.000000e+00 699.0
27 TraesCS4B01G358800 chr6A 90.400 250 19 4 5455 5703 609056746 609056991 2.090000e-84 324.0
28 TraesCS4B01G358800 chr6B 79.490 1058 123 43 982 2006 535442488 535443484 0.000000e+00 665.0
29 TraesCS4B01G358800 chr6B 87.349 498 43 11 4777 5268 704524588 704524105 2.450000e-153 553.0
30 TraesCS4B01G358800 chr6B 80.559 751 99 22 992 1730 661072737 661072022 8.870000e-148 534.0
31 TraesCS4B01G358800 chr6B 88.571 245 25 2 5468 5711 704524034 704523792 1.640000e-75 294.0
32 TraesCS4B01G358800 chr6B 88.276 145 15 2 1869 2011 661066716 661066572 8.010000e-39 172.0
33 TraesCS4B01G358800 chr6B 97.727 44 1 0 5373 5416 704524097 704524054 6.460000e-10 76.8
34 TraesCS4B01G358800 chr6B 75.377 199 26 11 18 201 661073529 661073339 2.320000e-09 75.0
35 TraesCS4B01G358800 chrUn 86.882 526 60 6 866 1390 236412599 236413116 1.120000e-161 580.0
36 TraesCS4B01G358800 chrUn 86.122 526 64 6 866 1390 35309340 35309857 5.260000e-155 558.0
37 TraesCS4B01G358800 chr6D 78.140 1043 132 41 992 1998 410108755 410107773 5.220000e-160 575.0
38 TraesCS4B01G358800 chr2A 89.286 56 6 0 666 721 768058202 768058257 3.010000e-08 71.3
39 TraesCS4B01G358800 chr1D 100.000 31 0 0 2051 2081 141705973 141706003 2.340000e-04 58.4
40 TraesCS4B01G358800 chr1B 100.000 31 0 0 2051 2081 195591197 195591227 2.340000e-04 58.4
41 TraesCS4B01G358800 chr2B 100.000 28 0 0 2054 2081 93394012 93394039 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G358800 chr4B 649470110 649476119 6009 False 11099.000000 11099 100.000000 1 6010 1 chr4B.!!$F1 6009
1 TraesCS4B01G358800 chr5A 688137221 688143300 6079 False 3708.500000 6737 90.839000 12 5711 2 chr5A.!!$F1 5699
2 TraesCS4B01G358800 chr4D 503616359 503622433 6074 False 1952.000000 2732 92.622500 1 5711 4 chr4D.!!$F1 5710
3 TraesCS4B01G358800 chr3A 212112691 212114811 2120 True 777.000000 1062 86.811000 2639 5009 3 chr3A.!!$R3 2370
4 TraesCS4B01G358800 chr3A 212130084 212131442 1358 True 372.500000 534 88.010500 1501 2597 2 chr3A.!!$R4 1096
5 TraesCS4B01G358800 chr3D 173708234 173714444 6210 True 629.800000 1051 86.923400 1741 5009 5 chr3D.!!$R2 3268
6 TraesCS4B01G358800 chr3D 501270688 501271450 762 True 466.000000 466 78.501000 1220 2011 1 chr3D.!!$R1 791
7 TraesCS4B01G358800 chr3B 252588638 252594954 6316 True 623.800000 1037 86.774800 1741 5009 5 chr3B.!!$R1 3268
8 TraesCS4B01G358800 chr6A 609055862 609056991 1129 False 511.500000 699 90.172500 4571 5703 2 chr6A.!!$F1 1132
9 TraesCS4B01G358800 chr6B 535442488 535443484 996 False 665.000000 665 79.490000 982 2006 1 chr6B.!!$F1 1024
10 TraesCS4B01G358800 chr6B 704523792 704524588 796 True 307.933333 553 91.215667 4777 5711 3 chr6B.!!$R3 934
11 TraesCS4B01G358800 chr6B 661072022 661073529 1507 True 304.500000 534 77.968000 18 1730 2 chr6B.!!$R2 1712
12 TraesCS4B01G358800 chrUn 236412599 236413116 517 False 580.000000 580 86.882000 866 1390 1 chrUn.!!$F2 524
13 TraesCS4B01G358800 chrUn 35309340 35309857 517 False 558.000000 558 86.122000 866 1390 1 chrUn.!!$F1 524
14 TraesCS4B01G358800 chr6D 410107773 410108755 982 True 575.000000 575 78.140000 992 1998 1 chr6D.!!$R1 1006

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
165 186 0.178903 AGCAACCAGTCTCCCCTGTA 60.179 55.0 0.00 0.0 0.00 2.74 F
1053 1522 0.032678 CCGAGTCTGACACTGCAACT 59.967 55.0 10.88 0.0 34.41 3.16 F
1390 1870 0.661020 CGGGAAATGCATCGGTAACC 59.339 55.0 0.00 0.0 0.00 2.85 F
2371 3289 1.013005 GGATCTCCATCTGCATCGCG 61.013 60.0 0.00 0.0 35.64 5.87 F
2771 7098 1.015109 CAGGTGCTCATCTGACATGC 58.985 55.0 4.16 0.0 42.03 4.06 F
3973 8348 0.255033 GGGGGTGCTTCGATACCTTT 59.745 55.0 12.09 0.0 37.15 3.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1493 1973 0.609957 CCATCCCTGCACACACACAT 60.610 55.000 0.0 0.0 0.00 3.21 R
2200 3118 0.536724 TGTGGGTGATGGTCGATCTG 59.463 55.000 0.0 0.0 31.55 2.90 R
2771 7098 0.813210 GGAGCAGCAGAGGGAAATCG 60.813 60.000 0.0 0.0 0.00 3.34 R
3917 8264 0.109781 CACATTGTTTCGGCCTTCGG 60.110 55.000 0.0 0.0 39.77 4.30 R
4505 9180 1.132657 TCCCTTGTGACCCAGTAGGAA 60.133 52.381 0.0 0.0 39.89 3.36 R
5742 10605 0.250234 CGCTCATGACTGGGAGGAAA 59.750 55.000 0.0 0.0 0.00 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
156 177 2.393271 ATAGCTGACAGCAACCAGTC 57.607 50.000 28.43 0.00 45.56 3.51
165 186 0.178903 AGCAACCAGTCTCCCCTGTA 60.179 55.000 0.00 0.00 0.00 2.74
222 249 1.606601 ACCAGTGAGGCAGCGAGTA 60.607 57.895 0.00 0.00 43.14 2.59
256 286 1.833934 CCAGCAGGCTTGGTTGGTT 60.834 57.895 0.00 0.00 31.36 3.67
257 287 1.364901 CAGCAGGCTTGGTTGGTTG 59.635 57.895 0.00 0.00 31.36 3.77
258 288 2.029518 GCAGGCTTGGTTGGTTGC 59.970 61.111 0.00 0.00 0.00 4.17
259 289 2.501602 GCAGGCTTGGTTGGTTGCT 61.502 57.895 0.00 0.00 0.00 3.91
260 290 1.364901 CAGGCTTGGTTGGTTGCTG 59.635 57.895 0.00 0.00 0.00 4.41
261 291 2.029518 GGCTTGGTTGGTTGCTGC 59.970 61.111 0.00 0.00 0.00 5.25
262 292 2.501602 GGCTTGGTTGGTTGCTGCT 61.502 57.895 0.00 0.00 0.00 4.24
310 340 2.492881 ACAGCTCTGTCTCTCTGATGTG 59.507 50.000 0.00 0.00 40.24 3.21
345 415 1.532523 AGGCTTCTCTTTGCTCTTGC 58.467 50.000 0.00 0.00 40.20 4.01
347 417 1.468127 GGCTTCTCTTTGCTCTTGCTC 59.532 52.381 0.00 0.00 40.48 4.26
349 419 1.731160 CTTCTCTTTGCTCTTGCTCCG 59.269 52.381 0.00 0.00 40.48 4.63
354 424 1.876156 CTTTGCTCTTGCTCCGTTCTT 59.124 47.619 0.00 0.00 40.48 2.52
361 438 2.072298 CTTGCTCCGTTCTTCTTCTGG 58.928 52.381 0.00 0.00 0.00 3.86
375 452 1.138661 CTTCTGGTGAGAGATGCTCCC 59.861 57.143 0.00 0.00 43.26 4.30
384 461 1.486726 AGAGATGCTCCCGGTTTAAGG 59.513 52.381 0.00 0.00 0.00 2.69
385 462 1.209747 GAGATGCTCCCGGTTTAAGGT 59.790 52.381 0.00 0.00 0.00 3.50
386 463 2.433239 GAGATGCTCCCGGTTTAAGGTA 59.567 50.000 0.00 0.00 0.00 3.08
547 631 8.979574 AGACAAATTTCTGTTACTCTTACTTCG 58.020 33.333 0.00 0.00 0.00 3.79
614 708 3.494749 GCTAGATCTGAGCAGCTGGAAAT 60.495 47.826 17.12 0.08 39.84 2.17
652 746 9.119418 CTGATAGAAAGAGAGATCTAACACTCA 57.881 37.037 10.76 0.00 35.83 3.41
671 844 5.240623 CACTCACTCTGTTCTCTTGTACTCT 59.759 44.000 0.00 0.00 0.00 3.24
692 865 4.527038 TCTCTCTGTCCGGAATTACTTGTT 59.473 41.667 5.23 0.00 0.00 2.83
694 867 4.039973 TCTCTGTCCGGAATTACTTGTTGT 59.960 41.667 5.23 0.00 0.00 3.32
702 875 7.118680 GTCCGGAATTACTTGTTGTAGAAATGA 59.881 37.037 5.23 0.00 32.08 2.57
748 921 4.720649 TCTCAGACAAGTAATTCCGGAG 57.279 45.455 3.34 0.00 0.00 4.63
749 922 3.119101 TCTCAGACAAGTAATTCCGGAGC 60.119 47.826 3.34 0.00 0.00 4.70
753 926 1.822990 ACAAGTAATTCCGGAGCGAGA 59.177 47.619 3.34 0.00 0.00 4.04
802 1266 7.376615 TCTTAAGTTGTACAGTAAGCTCTTCC 58.623 38.462 13.96 0.00 0.00 3.46
804 1268 5.140747 AGTTGTACAGTAAGCTCTTCCAG 57.859 43.478 0.00 0.00 0.00 3.86
861 1325 8.087750 GGATACAAGAGGAGATACATCTTTCTG 58.912 40.741 0.00 0.00 45.48 3.02
862 1326 6.865834 ACAAGAGGAGATACATCTTTCTGT 57.134 37.500 0.00 0.00 45.48 3.41
934 1401 4.499183 CCTCTTGGACAGCTAACTAACTG 58.501 47.826 0.00 0.00 39.86 3.16
937 1404 4.587262 TCTTGGACAGCTAACTAACTGACA 59.413 41.667 0.00 0.00 37.35 3.58
946 1413 3.629142 AACTAACTGACATGCTACCCC 57.371 47.619 0.00 0.00 0.00 4.95
948 1415 2.501723 ACTAACTGACATGCTACCCCTG 59.498 50.000 0.00 0.00 0.00 4.45
1053 1522 0.032678 CCGAGTCTGACACTGCAACT 59.967 55.000 10.88 0.00 34.41 3.16
1390 1870 0.661020 CGGGAAATGCATCGGTAACC 59.339 55.000 0.00 0.00 0.00 2.85
1488 1968 8.349983 CAAGTAGTAGTAATTGCTTTTGGTTGT 58.650 33.333 0.00 0.00 28.20 3.32
1489 1969 7.871853 AGTAGTAGTAATTGCTTTTGGTTGTG 58.128 34.615 0.00 0.00 0.00 3.33
1490 1970 6.709018 AGTAGTAATTGCTTTTGGTTGTGT 57.291 33.333 0.00 0.00 0.00 3.72
1491 1971 6.503524 AGTAGTAATTGCTTTTGGTTGTGTG 58.496 36.000 0.00 0.00 0.00 3.82
1492 1972 5.337578 AGTAATTGCTTTTGGTTGTGTGT 57.662 34.783 0.00 0.00 0.00 3.72
1493 1973 6.458232 AGTAATTGCTTTTGGTTGTGTGTA 57.542 33.333 0.00 0.00 0.00 2.90
1938 2799 2.039084 ACTTTCCAAGATCAAGGAGCGT 59.961 45.455 6.30 5.46 34.91 5.07
2044 2905 4.576463 ACATCCTCTGTTCTTTGTTCACAC 59.424 41.667 0.00 0.00 32.90 3.82
2088 3006 8.627403 TGTTCCTAAATATAAGACGAGGTAGTG 58.373 37.037 0.00 0.00 0.00 2.74
2090 3008 8.985315 TCCTAAATATAAGACGAGGTAGTGAA 57.015 34.615 0.00 0.00 0.00 3.18
2119 3037 1.327303 TTTGCGGCATGGTTTCTTCT 58.673 45.000 2.28 0.00 0.00 2.85
2138 3056 8.703604 TTCTTCTTAATTAACCACTCGATCTG 57.296 34.615 0.00 0.00 0.00 2.90
2141 3059 9.319143 CTTCTTAATTAACCACTCGATCTGAAT 57.681 33.333 0.00 0.00 0.00 2.57
2200 3118 1.675641 ACCATCTGAAGCCGTTGCC 60.676 57.895 0.00 0.00 38.69 4.52
2279 3197 1.476845 TAGCAAGGACACAAGCCCGA 61.477 55.000 0.00 0.00 0.00 5.14
2371 3289 1.013005 GGATCTCCATCTGCATCGCG 61.013 60.000 0.00 0.00 35.64 5.87
2470 3388 4.821589 GCGGCCGAGACCCTCAAG 62.822 72.222 33.48 0.00 0.00 3.02
2518 3436 2.670905 TGTCTGCCGAAATACAATCACG 59.329 45.455 0.00 0.00 0.00 4.35
2569 3487 4.218417 GCTGTTGTACCCTTCAATGACAAT 59.782 41.667 0.00 0.00 32.99 2.71
2599 3517 8.344446 ACTTCCACAAGGTAATGTAAATAACC 57.656 34.615 0.00 0.00 33.37 2.85
2622 6767 6.761714 ACCGGTATTTCTGCATTAAGTAAGAG 59.238 38.462 4.49 0.00 0.00 2.85
2623 6768 6.292919 CCGGTATTTCTGCATTAAGTAAGAGC 60.293 42.308 0.00 0.00 0.00 4.09
2624 6769 6.292919 CGGTATTTCTGCATTAAGTAAGAGCC 60.293 42.308 0.00 0.00 0.00 4.70
2647 6964 5.248020 CCTATCCTGAGAATAACCTGCTGAT 59.752 44.000 0.00 0.00 0.00 2.90
2687 7004 3.185246 AGCACTTAACATAGCGAGCAT 57.815 42.857 0.00 0.00 0.00 3.79
2688 7005 3.126831 AGCACTTAACATAGCGAGCATC 58.873 45.455 0.00 0.00 0.00 3.91
2690 7007 3.309682 GCACTTAACATAGCGAGCATCAA 59.690 43.478 0.00 0.00 33.17 2.57
2696 7013 7.279981 ACTTAACATAGCGAGCATCAATTTGTA 59.720 33.333 0.00 0.00 33.17 2.41
2697 7014 6.624352 AACATAGCGAGCATCAATTTGTAT 57.376 33.333 0.00 0.00 33.17 2.29
2698 7015 5.993891 ACATAGCGAGCATCAATTTGTATG 58.006 37.500 0.00 1.25 33.17 2.39
2699 7016 5.528690 ACATAGCGAGCATCAATTTGTATGT 59.471 36.000 0.00 0.00 33.17 2.29
2700 7017 4.970662 AGCGAGCATCAATTTGTATGTT 57.029 36.364 0.00 0.00 33.17 2.71
2701 7018 4.913376 AGCGAGCATCAATTTGTATGTTC 58.087 39.130 0.00 11.78 33.17 3.18
2771 7098 1.015109 CAGGTGCTCATCTGACATGC 58.985 55.000 4.16 0.00 42.03 4.06
2783 7110 1.938577 CTGACATGCGATTTCCCTCTG 59.061 52.381 0.00 0.00 0.00 3.35
2968 7295 2.731976 GACGTAACAAGCTCAAGGACAG 59.268 50.000 0.00 0.00 0.00 3.51
3059 7386 2.202797 CTGCTCATCGTCCACGGG 60.203 66.667 0.00 0.00 40.29 5.28
3077 7404 4.082408 CACGGGACAAGTCTGTATCTAACA 60.082 45.833 0.00 0.00 35.30 2.41
3107 7434 6.375174 AGTGGTACAAGAAAACGGTAAAAGTT 59.625 34.615 0.00 0.00 44.16 2.66
3135 7463 7.338710 TCTATGCCCTCTATATTAATGCCAAC 58.661 38.462 0.00 0.00 0.00 3.77
3137 7465 5.891198 TGCCCTCTATATTAATGCCAACAT 58.109 37.500 0.00 0.00 38.49 2.71
3443 7788 5.126707 GGAGATGGATTTCTGAACAGCAAAT 59.873 40.000 0.00 9.89 0.00 2.32
3446 7791 8.302515 AGATGGATTTCTGAACAGCAAATAAT 57.697 30.769 0.00 3.45 0.00 1.28
3447 7792 9.412460 AGATGGATTTCTGAACAGCAAATAATA 57.588 29.630 0.00 0.00 0.00 0.98
3499 7844 7.502226 TGAATTCACTCTTTCTTAGCCTTCAAA 59.498 33.333 3.38 0.00 0.00 2.69
3509 7854 6.084326 TCTTAGCCTTCAAATTTTGTGTCC 57.916 37.500 8.89 0.00 0.00 4.02
3510 7855 5.833131 TCTTAGCCTTCAAATTTTGTGTCCT 59.167 36.000 8.89 5.15 0.00 3.85
3511 7856 7.001674 TCTTAGCCTTCAAATTTTGTGTCCTA 58.998 34.615 8.89 4.35 0.00 2.94
3512 7857 7.504238 TCTTAGCCTTCAAATTTTGTGTCCTAA 59.496 33.333 8.89 10.25 0.00 2.69
3526 7871 5.133941 TGTGTCCTAATTAAACAGGTTGCA 58.866 37.500 5.81 0.00 33.37 4.08
3610 7955 5.186198 AGTGGGCAGTACATCTTCATAAAC 58.814 41.667 0.00 0.00 0.00 2.01
3660 8006 1.949525 CCCAAGTCACACACTTTGAGG 59.050 52.381 0.00 0.00 43.38 3.86
3875 8221 4.712337 TCTTTGGCCTTTTGGTTTGTCTAA 59.288 37.500 3.32 0.00 42.99 2.10
3878 8225 6.732896 TTGGCCTTTTGGTTTGTCTAATAA 57.267 33.333 3.32 0.00 42.99 1.40
3900 8247 9.747898 AATAACACATCCTATTGGAAGTTTGTA 57.252 29.630 13.89 3.87 46.80 2.41
3901 8248 7.687941 AACACATCCTATTGGAAGTTTGTAG 57.312 36.000 1.12 0.25 46.80 2.74
3904 8251 7.942341 ACACATCCTATTGGAAGTTTGTAGAAA 59.058 33.333 1.12 0.00 46.80 2.52
3906 8253 7.942341 ACATCCTATTGGAAGTTTGTAGAAACA 59.058 33.333 16.89 0.00 46.80 2.83
3907 8254 8.960591 CATCCTATTGGAAGTTTGTAGAAACAT 58.039 33.333 16.89 5.61 46.80 2.71
3908 8255 8.335532 TCCTATTGGAAGTTTGTAGAAACATG 57.664 34.615 16.89 0.00 39.72 3.21
3909 8256 7.942341 TCCTATTGGAAGTTTGTAGAAACATGT 59.058 33.333 16.89 0.00 39.72 3.21
3910 8257 8.237267 CCTATTGGAAGTTTGTAGAAACATGTC 58.763 37.037 16.89 10.62 38.86 3.06
3912 8259 7.581213 TTGGAAGTTTGTAGAAACATGTCAT 57.419 32.000 16.89 0.00 43.51 3.06
3913 8260 6.969366 TGGAAGTTTGTAGAAACATGTCATG 58.031 36.000 16.89 11.41 43.51 3.07
3914 8261 5.858581 GGAAGTTTGTAGAAACATGTCATGC 59.141 40.000 16.89 0.00 43.51 4.06
3915 8262 6.389830 AAGTTTGTAGAAACATGTCATGCA 57.610 33.333 16.89 0.00 43.51 3.96
3916 8263 5.762045 AGTTTGTAGAAACATGTCATGCAC 58.238 37.500 16.89 4.79 43.51 4.57
3917 8264 4.764679 TTGTAGAAACATGTCATGCACC 57.235 40.909 12.91 2.19 34.97 5.01
3919 8266 1.167851 AGAAACATGTCATGCACCCG 58.832 50.000 12.91 0.00 0.00 5.28
3942 8317 1.066303 GGCCGAAACAATGTGTGACAA 59.934 47.619 0.00 0.00 0.00 3.18
3949 8324 6.695278 CCGAAACAATGTGTGACAAAATTACT 59.305 34.615 0.00 0.00 0.00 2.24
3965 8340 4.618920 ATTACTTATAGGGGGTGCTTCG 57.381 45.455 0.00 0.00 0.00 3.79
3967 8342 2.690840 ACTTATAGGGGGTGCTTCGAT 58.309 47.619 0.00 0.00 0.00 3.59
3968 8343 3.853207 ACTTATAGGGGGTGCTTCGATA 58.147 45.455 0.00 0.00 0.00 2.92
3969 8344 3.577415 ACTTATAGGGGGTGCTTCGATAC 59.423 47.826 0.00 0.00 0.00 2.24
3973 8348 0.255033 GGGGGTGCTTCGATACCTTT 59.745 55.000 12.09 0.00 37.15 3.11
3975 8350 1.743394 GGGGTGCTTCGATACCTTTTG 59.257 52.381 12.09 0.00 37.15 2.44
3976 8351 1.132453 GGGTGCTTCGATACCTTTTGC 59.868 52.381 12.09 0.00 37.15 3.68
3977 8352 1.132453 GGTGCTTCGATACCTTTTGCC 59.868 52.381 6.73 0.00 34.11 4.52
3979 8354 0.377203 GCTTCGATACCTTTTGCCCG 59.623 55.000 0.00 0.00 0.00 6.13
3992 8645 5.833131 ACCTTTTGCCCGAAATGTATCATAT 59.167 36.000 0.00 0.00 0.00 1.78
4003 8656 9.599322 CCGAAATGTATCATATTCTTGCTTAAC 57.401 33.333 0.00 0.00 0.00 2.01
4031 8684 7.141363 ACTTAAATGTCTGAAGCATTGTGAAC 58.859 34.615 0.00 0.00 36.75 3.18
4069 8729 5.680594 TTTTCATATCAAGGCCATTGCTT 57.319 34.783 5.01 1.06 38.89 3.91
4218 8878 4.518211 AGGAACTTGCTCAGTTGATTCAAG 59.482 41.667 16.18 16.18 46.53 3.02
4219 8879 4.320788 GGAACTTGCTCAGTTGATTCAAGG 60.321 45.833 19.32 0.00 46.53 3.61
4221 8881 4.070716 ACTTGCTCAGTTGATTCAAGGAG 58.929 43.478 17.57 17.57 38.10 3.69
4222 8882 3.777106 TGCTCAGTTGATTCAAGGAGT 57.223 42.857 20.59 0.00 32.24 3.85
4223 8883 4.890158 TGCTCAGTTGATTCAAGGAGTA 57.110 40.909 20.59 16.51 32.24 2.59
4224 8884 5.227569 TGCTCAGTTGATTCAAGGAGTAA 57.772 39.130 20.59 12.05 32.24 2.24
4225 8885 5.620206 TGCTCAGTTGATTCAAGGAGTAAA 58.380 37.500 20.59 10.42 32.24 2.01
4229 8889 8.178313 GCTCAGTTGATTCAAGGAGTAAAATAC 58.822 37.037 20.59 6.75 32.24 1.89
4230 8890 9.219603 CTCAGTTGATTCAAGGAGTAAAATACA 57.780 33.333 15.17 0.00 0.00 2.29
4231 8891 9.567776 TCAGTTGATTCAAGGAGTAAAATACAA 57.432 29.630 0.00 0.00 0.00 2.41
4292 8964 8.258007 TGTTTGACATGTACTAGATTCCCTAAG 58.742 37.037 0.00 0.00 0.00 2.18
4343 9015 4.389374 CAGCACAAGATTACCGGGAATAT 58.611 43.478 13.24 6.22 0.00 1.28
4505 9180 2.173569 GTTCATGACCAAGAGGGCCTAT 59.826 50.000 5.73 0.00 45.14 2.57
4616 9291 1.968540 GCTCCACAACCACTGCTCC 60.969 63.158 0.00 0.00 0.00 4.70
4830 9512 2.431782 TGCCATTCTCACATCGATCTGA 59.568 45.455 3.25 3.25 0.00 3.27
4872 9554 3.894920 AGTTATCATCGATCGTCTGCTG 58.105 45.455 15.94 6.54 0.00 4.41
5117 9951 4.448210 TGTTTGGACTGGTTTAGACACTC 58.552 43.478 0.00 0.00 0.00 3.51
5129 9963 8.311395 TGGTTTAGACACTCTATCATGAGATT 57.689 34.615 0.09 0.00 37.50 2.40
5144 9979 7.525688 TCATGAGATTTCGATACTGAACAAC 57.474 36.000 0.00 0.00 0.00 3.32
5287 10125 2.724977 TCGAACAAGCGTGAGATTCT 57.275 45.000 6.65 0.00 37.83 2.40
5289 10127 2.229062 TCGAACAAGCGTGAGATTCTCT 59.771 45.455 14.54 0.00 37.83 3.10
5330 10168 5.125900 TCCATTTGGATTAGTGACAATGCAG 59.874 40.000 0.00 0.00 39.78 4.41
5345 10183 1.815421 GCAGATGCCACCTGTACCG 60.815 63.158 0.00 0.00 34.29 4.02
5465 10309 5.358298 GTGACTTCACCCACAATAAGTTC 57.642 43.478 0.00 0.00 40.85 3.01
5466 10310 4.819630 GTGACTTCACCCACAATAAGTTCA 59.180 41.667 0.00 0.00 40.85 3.18
5468 10312 6.016276 GTGACTTCACCCACAATAAGTTCATT 60.016 38.462 0.00 0.00 40.85 2.57
5469 10313 6.206634 TGACTTCACCCACAATAAGTTCATTC 59.793 38.462 0.00 0.00 32.51 2.67
5473 10336 5.014123 TCACCCACAATAAGTTCATTCTCCT 59.986 40.000 0.00 0.00 0.00 3.69
5486 10349 7.512992 AGTTCATTCTCCTAGGGAATTACATG 58.487 38.462 17.90 11.19 31.90 3.21
5528 10391 7.502120 AGACTAACTCACTAAAGAACGTACA 57.498 36.000 0.00 0.00 0.00 2.90
5639 10502 0.182775 GGACGGTAGGGGAATGCATT 59.817 55.000 12.83 12.83 0.00 3.56
5641 10504 0.751643 ACGGTAGGGGAATGCATTGC 60.752 55.000 21.57 21.57 0.00 3.56
5643 10506 0.106015 GGTAGGGGAATGCATTGCCT 60.106 55.000 38.55 28.66 46.24 4.75
5711 10574 5.458595 TCCTAGATACTGCATTCTGGAAGA 58.541 41.667 6.44 0.00 44.68 2.87
5721 10584 3.401032 TCTGGAAGAAGGAGGGGAC 57.599 57.895 0.00 0.00 42.31 4.46
5722 10585 2.302019 CTGGAAGAAGGAGGGGACC 58.698 63.158 0.00 0.00 45.83 4.46
5723 10586 1.275421 CTGGAAGAAGGAGGGGACCC 61.275 65.000 0.03 0.03 46.76 4.46
5747 10610 3.782443 CGGCGGCTAGGGTTTCCT 61.782 66.667 7.61 0.00 46.96 3.36
5748 10611 2.189784 GGCGGCTAGGGTTTCCTC 59.810 66.667 0.00 0.00 43.66 3.71
5749 10612 2.189784 GCGGCTAGGGTTTCCTCC 59.810 66.667 0.00 0.00 43.66 4.30
5750 10613 2.908796 CGGCTAGGGTTTCCTCCC 59.091 66.667 0.00 0.00 43.66 4.30
5757 10620 3.577389 GGGTTTCCTCCCAGTCATG 57.423 57.895 0.00 0.00 46.30 3.07
5758 10621 0.991920 GGGTTTCCTCCCAGTCATGA 59.008 55.000 0.00 0.00 46.30 3.07
5759 10622 1.065126 GGGTTTCCTCCCAGTCATGAG 60.065 57.143 0.00 0.00 46.30 2.90
5760 10623 1.680249 GGTTTCCTCCCAGTCATGAGC 60.680 57.143 0.00 0.00 0.00 4.26
5761 10624 0.250234 TTTCCTCCCAGTCATGAGCG 59.750 55.000 0.00 0.00 0.00 5.03
5762 10625 1.617018 TTCCTCCCAGTCATGAGCGG 61.617 60.000 0.00 0.00 0.00 5.52
5763 10626 2.503061 CTCCCAGTCATGAGCGGG 59.497 66.667 19.53 19.53 40.32 6.13
5764 10627 3.083349 TCCCAGTCATGAGCGGGG 61.083 66.667 23.39 21.57 41.76 5.73
5765 10628 4.864334 CCCAGTCATGAGCGGGGC 62.864 72.222 18.28 0.00 34.77 5.80
5767 10630 4.147449 CAGTCATGAGCGGGGCGA 62.147 66.667 0.00 0.00 0.00 5.54
5768 10631 4.148825 AGTCATGAGCGGGGCGAC 62.149 66.667 0.00 0.00 0.00 5.19
5769 10632 4.451150 GTCATGAGCGGGGCGACA 62.451 66.667 0.00 0.00 0.00 4.35
5770 10633 4.451150 TCATGAGCGGGGCGACAC 62.451 66.667 0.00 0.00 0.00 3.67
5771 10634 4.758251 CATGAGCGGGGCGACACA 62.758 66.667 0.00 0.00 0.00 3.72
5772 10635 4.015406 ATGAGCGGGGCGACACAA 62.015 61.111 0.00 0.00 0.00 3.33
5773 10636 3.958147 ATGAGCGGGGCGACACAAG 62.958 63.158 0.00 0.00 0.00 3.16
5774 10637 4.373116 GAGCGGGGCGACACAAGA 62.373 66.667 0.00 0.00 0.00 3.02
5775 10638 4.379243 AGCGGGGCGACACAAGAG 62.379 66.667 0.00 0.00 0.00 2.85
5777 10640 3.691342 CGGGGCGACACAAGAGGA 61.691 66.667 0.00 0.00 0.00 3.71
5778 10641 2.266055 GGGGCGACACAAGAGGAG 59.734 66.667 0.00 0.00 0.00 3.69
5779 10642 2.266055 GGGCGACACAAGAGGAGG 59.734 66.667 0.00 0.00 0.00 4.30
5780 10643 2.266055 GGCGACACAAGAGGAGGG 59.734 66.667 0.00 0.00 0.00 4.30
5781 10644 2.266055 GCGACACAAGAGGAGGGG 59.734 66.667 0.00 0.00 0.00 4.79
5782 10645 2.982130 CGACACAAGAGGAGGGGG 59.018 66.667 0.00 0.00 0.00 5.40
5798 10661 1.723288 GGGGGAGGAGGAGTAGATTG 58.277 60.000 0.00 0.00 0.00 2.67
5799 10662 1.062044 GGGGGAGGAGGAGTAGATTGT 60.062 57.143 0.00 0.00 0.00 2.71
5800 10663 2.321719 GGGGAGGAGGAGTAGATTGTC 58.678 57.143 0.00 0.00 0.00 3.18
5801 10664 2.359355 GGGGAGGAGGAGTAGATTGTCA 60.359 54.545 0.00 0.00 0.00 3.58
5802 10665 3.582164 GGGAGGAGGAGTAGATTGTCAT 58.418 50.000 0.00 0.00 0.00 3.06
5803 10666 3.576550 GGGAGGAGGAGTAGATTGTCATC 59.423 52.174 0.00 0.00 0.00 2.92
5804 10667 4.219115 GGAGGAGGAGTAGATTGTCATCA 58.781 47.826 0.00 0.00 0.00 3.07
5805 10668 4.837860 GGAGGAGGAGTAGATTGTCATCAT 59.162 45.833 0.00 0.00 0.00 2.45
5806 10669 5.279406 GGAGGAGGAGTAGATTGTCATCATG 60.279 48.000 0.00 0.00 0.00 3.07
5807 10670 5.462240 AGGAGGAGTAGATTGTCATCATGA 58.538 41.667 0.00 0.00 0.00 3.07
5809 10672 5.510520 GGAGGAGTAGATTGTCATCATGACC 60.511 48.000 15.44 0.00 46.40 4.02
5810 10673 4.038522 AGGAGTAGATTGTCATCATGACCG 59.961 45.833 15.44 0.00 46.40 4.79
5811 10674 4.302455 GAGTAGATTGTCATCATGACCGG 58.698 47.826 15.44 0.00 46.40 5.28
5812 10675 3.960755 AGTAGATTGTCATCATGACCGGA 59.039 43.478 15.44 1.86 46.40 5.14
5813 10676 3.912496 AGATTGTCATCATGACCGGAA 57.088 42.857 15.44 3.45 46.40 4.30
5814 10677 4.428294 AGATTGTCATCATGACCGGAAT 57.572 40.909 15.44 8.30 46.40 3.01
5815 10678 4.132336 AGATTGTCATCATGACCGGAATG 58.868 43.478 15.44 12.21 46.40 2.67
5816 10679 3.625649 TTGTCATCATGACCGGAATGA 57.374 42.857 21.35 21.35 46.40 2.57
5817 10680 3.183793 TGTCATCATGACCGGAATGAG 57.816 47.619 22.72 16.57 46.40 2.90
5818 10681 2.765699 TGTCATCATGACCGGAATGAGA 59.234 45.455 22.72 17.94 46.40 3.27
5819 10682 3.126831 GTCATCATGACCGGAATGAGAC 58.873 50.000 22.72 22.41 41.37 3.36
5820 10683 3.033909 TCATCATGACCGGAATGAGACT 58.966 45.455 22.72 9.54 37.46 3.24
5821 10684 3.452264 TCATCATGACCGGAATGAGACTT 59.548 43.478 22.72 9.26 37.46 3.01
5822 10685 3.981071 TCATGACCGGAATGAGACTTT 57.019 42.857 9.46 0.00 30.61 2.66
5823 10686 4.286297 TCATGACCGGAATGAGACTTTT 57.714 40.909 9.46 0.00 30.61 2.27
5824 10687 4.253685 TCATGACCGGAATGAGACTTTTC 58.746 43.478 9.46 0.00 30.61 2.29
5825 10688 4.020218 TCATGACCGGAATGAGACTTTTCT 60.020 41.667 9.46 0.00 33.37 2.52
5826 10689 3.664107 TGACCGGAATGAGACTTTTCTG 58.336 45.455 9.46 2.42 29.47 3.02
5827 10690 3.071023 TGACCGGAATGAGACTTTTCTGT 59.929 43.478 9.46 2.78 29.47 3.41
5828 10691 3.403038 ACCGGAATGAGACTTTTCTGTG 58.597 45.455 9.46 3.04 29.47 3.66
5829 10692 3.181454 ACCGGAATGAGACTTTTCTGTGT 60.181 43.478 9.46 3.47 29.47 3.72
5830 10693 4.039973 ACCGGAATGAGACTTTTCTGTGTA 59.960 41.667 9.46 0.00 29.47 2.90
5831 10694 4.994852 CCGGAATGAGACTTTTCTGTGTAA 59.005 41.667 0.00 0.00 29.47 2.41
5832 10695 5.120830 CCGGAATGAGACTTTTCTGTGTAAG 59.879 44.000 0.00 0.00 29.47 2.34
5833 10696 5.926542 CGGAATGAGACTTTTCTGTGTAAGA 59.073 40.000 0.00 0.00 29.47 2.10
5834 10697 6.128795 CGGAATGAGACTTTTCTGTGTAAGAC 60.129 42.308 0.00 0.00 33.46 3.01
5835 10698 6.147985 GGAATGAGACTTTTCTGTGTAAGACC 59.852 42.308 0.00 0.00 33.46 3.85
5836 10699 5.871396 TGAGACTTTTCTGTGTAAGACCT 57.129 39.130 0.00 0.00 33.46 3.85
5837 10700 5.601662 TGAGACTTTTCTGTGTAAGACCTG 58.398 41.667 0.00 0.00 33.46 4.00
5838 10701 4.381411 AGACTTTTCTGTGTAAGACCTGC 58.619 43.478 0.00 0.00 33.46 4.85
5839 10702 4.127171 GACTTTTCTGTGTAAGACCTGCA 58.873 43.478 0.00 0.00 33.46 4.41
5840 10703 3.877508 ACTTTTCTGTGTAAGACCTGCAC 59.122 43.478 0.00 0.00 33.46 4.57
5841 10704 2.543777 TTCTGTGTAAGACCTGCACC 57.456 50.000 0.00 0.00 33.46 5.01
5842 10705 0.685097 TCTGTGTAAGACCTGCACCC 59.315 55.000 0.00 0.00 32.62 4.61
5843 10706 0.687354 CTGTGTAAGACCTGCACCCT 59.313 55.000 0.00 0.00 32.62 4.34
5844 10707 1.072331 CTGTGTAAGACCTGCACCCTT 59.928 52.381 0.00 0.00 32.62 3.95
5845 10708 1.071699 TGTGTAAGACCTGCACCCTTC 59.928 52.381 0.00 0.00 32.62 3.46
5846 10709 1.348036 GTGTAAGACCTGCACCCTTCT 59.652 52.381 0.00 0.00 0.00 2.85
5847 10710 2.054799 TGTAAGACCTGCACCCTTCTT 58.945 47.619 0.00 0.00 32.99 2.52
5848 10711 2.038557 TGTAAGACCTGCACCCTTCTTC 59.961 50.000 0.00 0.00 30.89 2.87
5849 10712 0.402121 AAGACCTGCACCCTTCTTCC 59.598 55.000 0.00 0.00 0.00 3.46
5850 10713 1.002011 GACCTGCACCCTTCTTCCC 60.002 63.158 0.00 0.00 0.00 3.97
5851 10714 1.464198 ACCTGCACCCTTCTTCCCT 60.464 57.895 0.00 0.00 0.00 4.20
5852 10715 1.001641 CCTGCACCCTTCTTCCCTG 60.002 63.158 0.00 0.00 0.00 4.45
5853 10716 1.001641 CTGCACCCTTCTTCCCTGG 60.002 63.158 0.00 0.00 0.00 4.45
5854 10717 2.356667 GCACCCTTCTTCCCTGGG 59.643 66.667 6.33 6.33 46.07 4.45
5855 10718 2.231380 GCACCCTTCTTCCCTGGGA 61.231 63.158 12.53 12.53 43.47 4.37
5856 10719 1.685820 CACCCTTCTTCCCTGGGAC 59.314 63.158 16.85 0.00 43.47 4.46
5857 10720 1.133809 CACCCTTCTTCCCTGGGACA 61.134 60.000 16.85 1.53 43.47 4.02
5858 10721 0.402861 ACCCTTCTTCCCTGGGACAA 60.403 55.000 16.85 10.45 43.47 3.18
5859 10722 0.329596 CCCTTCTTCCCTGGGACAAG 59.670 60.000 16.85 19.05 43.47 3.16
5860 10723 0.329596 CCTTCTTCCCTGGGACAAGG 59.670 60.000 27.24 27.24 42.41 3.61
5861 10724 1.068121 CTTCTTCCCTGGGACAAGGT 58.932 55.000 16.85 0.00 41.59 3.50
5862 10725 2.266279 CTTCTTCCCTGGGACAAGGTA 58.734 52.381 16.85 0.00 41.59 3.08
5863 10726 1.952621 TCTTCCCTGGGACAAGGTAG 58.047 55.000 16.85 9.32 41.59 3.18
5864 10727 1.151413 TCTTCCCTGGGACAAGGTAGT 59.849 52.381 16.85 0.00 41.59 2.73
5865 10728 2.384375 TCTTCCCTGGGACAAGGTAGTA 59.616 50.000 16.85 0.00 41.59 1.82
5866 10729 3.178865 CTTCCCTGGGACAAGGTAGTAA 58.821 50.000 16.85 0.00 41.59 2.24
5867 10730 3.278987 TCCCTGGGACAAGGTAGTAAA 57.721 47.619 12.53 0.00 41.59 2.01
5868 10731 3.600433 TCCCTGGGACAAGGTAGTAAAA 58.400 45.455 12.53 0.00 41.59 1.52
5869 10732 4.180723 TCCCTGGGACAAGGTAGTAAAAT 58.819 43.478 12.53 0.00 41.59 1.82
5870 10733 4.018779 TCCCTGGGACAAGGTAGTAAAATG 60.019 45.833 12.53 0.00 41.59 2.32
5871 10734 3.694566 CCTGGGACAAGGTAGTAAAATGC 59.305 47.826 0.00 0.00 38.70 3.56
5872 10735 3.692690 TGGGACAAGGTAGTAAAATGCC 58.307 45.455 0.00 0.00 31.92 4.40
5873 10736 2.681344 GGGACAAGGTAGTAAAATGCCG 59.319 50.000 0.00 0.00 0.00 5.69
5874 10737 2.681344 GGACAAGGTAGTAAAATGCCGG 59.319 50.000 0.00 0.00 0.00 6.13
5875 10738 3.340928 GACAAGGTAGTAAAATGCCGGT 58.659 45.455 1.90 0.00 0.00 5.28
5876 10739 3.340928 ACAAGGTAGTAAAATGCCGGTC 58.659 45.455 1.90 0.00 0.00 4.79
5877 10740 2.681344 CAAGGTAGTAAAATGCCGGTCC 59.319 50.000 1.90 0.00 0.00 4.46
5878 10741 1.910671 AGGTAGTAAAATGCCGGTCCA 59.089 47.619 1.90 0.00 0.00 4.02
5879 10742 2.306512 AGGTAGTAAAATGCCGGTCCAA 59.693 45.455 1.90 0.00 0.00 3.53
5880 10743 3.083293 GGTAGTAAAATGCCGGTCCAAA 58.917 45.455 1.90 0.00 0.00 3.28
5881 10744 3.697542 GGTAGTAAAATGCCGGTCCAAAT 59.302 43.478 1.90 0.00 0.00 2.32
5882 10745 4.201980 GGTAGTAAAATGCCGGTCCAAATC 60.202 45.833 1.90 0.00 0.00 2.17
5883 10746 3.697166 AGTAAAATGCCGGTCCAAATCT 58.303 40.909 1.90 0.00 0.00 2.40
5884 10747 4.850680 AGTAAAATGCCGGTCCAAATCTA 58.149 39.130 1.90 0.00 0.00 1.98
5885 10748 5.258051 AGTAAAATGCCGGTCCAAATCTAA 58.742 37.500 1.90 0.00 0.00 2.10
5886 10749 4.450082 AAAATGCCGGTCCAAATCTAAC 57.550 40.909 1.90 0.00 0.00 2.34
5887 10750 2.799126 ATGCCGGTCCAAATCTAACA 57.201 45.000 1.90 0.00 0.00 2.41
5888 10751 2.570415 TGCCGGTCCAAATCTAACAA 57.430 45.000 1.90 0.00 0.00 2.83
5889 10752 2.865079 TGCCGGTCCAAATCTAACAAA 58.135 42.857 1.90 0.00 0.00 2.83
5890 10753 3.426615 TGCCGGTCCAAATCTAACAAAT 58.573 40.909 1.90 0.00 0.00 2.32
5891 10754 3.829601 TGCCGGTCCAAATCTAACAAATT 59.170 39.130 1.90 0.00 0.00 1.82
5892 10755 4.282195 TGCCGGTCCAAATCTAACAAATTT 59.718 37.500 1.90 0.00 0.00 1.82
5893 10756 4.625311 GCCGGTCCAAATCTAACAAATTTG 59.375 41.667 16.67 16.67 41.60 2.32
5894 10757 5.778862 CCGGTCCAAATCTAACAAATTTGT 58.221 37.500 18.13 18.13 44.72 2.83
5910 10773 8.137210 ACAAATTTGTTGTTGCCTTGTAATAC 57.863 30.769 18.13 0.00 38.47 1.89
5911 10774 7.225734 ACAAATTTGTTGTTGCCTTGTAATACC 59.774 33.333 18.13 0.00 38.47 2.73
5912 10775 5.854010 TTTGTTGTTGCCTTGTAATACCA 57.146 34.783 0.00 0.00 0.00 3.25
5913 10776 4.839668 TGTTGTTGCCTTGTAATACCAC 57.160 40.909 0.00 0.00 0.00 4.16
5914 10777 3.251245 TGTTGTTGCCTTGTAATACCACG 59.749 43.478 0.00 0.00 0.00 4.94
5915 10778 2.428491 TGTTGCCTTGTAATACCACGG 58.572 47.619 0.00 0.00 0.00 4.94
5916 10779 2.224572 TGTTGCCTTGTAATACCACGGT 60.225 45.455 0.00 0.00 0.00 4.83
5917 10780 2.815503 GTTGCCTTGTAATACCACGGTT 59.184 45.455 0.00 0.00 0.00 4.44
5918 10781 2.702261 TGCCTTGTAATACCACGGTTC 58.298 47.619 0.00 0.00 0.00 3.62
5919 10782 2.038689 TGCCTTGTAATACCACGGTTCA 59.961 45.455 0.00 0.00 0.00 3.18
5920 10783 2.676342 GCCTTGTAATACCACGGTTCAG 59.324 50.000 0.00 0.00 0.00 3.02
5921 10784 3.618019 GCCTTGTAATACCACGGTTCAGA 60.618 47.826 0.00 0.00 0.00 3.27
5922 10785 4.766375 CCTTGTAATACCACGGTTCAGAT 58.234 43.478 0.00 0.00 0.00 2.90
5923 10786 5.183228 CCTTGTAATACCACGGTTCAGATT 58.817 41.667 0.00 0.00 0.00 2.40
5924 10787 5.646360 CCTTGTAATACCACGGTTCAGATTT 59.354 40.000 0.00 0.00 0.00 2.17
5925 10788 6.150474 CCTTGTAATACCACGGTTCAGATTTT 59.850 38.462 0.00 0.00 0.00 1.82
5926 10789 7.334921 CCTTGTAATACCACGGTTCAGATTTTA 59.665 37.037 0.00 0.00 0.00 1.52
5927 10790 8.618702 TTGTAATACCACGGTTCAGATTTTAA 57.381 30.769 0.00 0.00 0.00 1.52
5928 10791 8.618702 TGTAATACCACGGTTCAGATTTTAAA 57.381 30.769 0.00 0.00 0.00 1.52
5929 10792 9.064706 TGTAATACCACGGTTCAGATTTTAAAA 57.935 29.630 2.51 2.51 0.00 1.52
5932 10795 8.980143 ATACCACGGTTCAGATTTTAAAATTG 57.020 30.769 14.45 13.49 0.00 2.32
5933 10796 7.045126 ACCACGGTTCAGATTTTAAAATTGA 57.955 32.000 14.45 15.20 0.00 2.57
5934 10797 7.493367 ACCACGGTTCAGATTTTAAAATTGAA 58.507 30.769 21.57 21.57 0.00 2.69
5935 10798 7.982354 ACCACGGTTCAGATTTTAAAATTGAAA 59.018 29.630 24.27 14.30 32.58 2.69
5936 10799 8.821894 CCACGGTTCAGATTTTAAAATTGAAAA 58.178 29.630 24.27 13.12 32.58 2.29
5953 10816 9.545105 AAATTGAAAAATCTGTTAACTGCATCA 57.455 25.926 7.22 4.75 0.00 3.07
5954 10817 9.715121 AATTGAAAAATCTGTTAACTGCATCAT 57.285 25.926 7.22 0.00 0.00 2.45
5957 10820 9.791820 TGAAAAATCTGTTAACTGCATCATATG 57.208 29.630 7.22 0.00 0.00 1.78
5961 10824 9.793252 AAATCTGTTAACTGCATCATATGAAAC 57.207 29.630 9.99 8.21 0.00 2.78
5962 10825 7.320443 TCTGTTAACTGCATCATATGAAACC 57.680 36.000 9.99 1.81 0.00 3.27
5963 10826 6.883756 TCTGTTAACTGCATCATATGAAACCA 59.116 34.615 9.99 6.35 0.00 3.67
5964 10827 6.851609 TGTTAACTGCATCATATGAAACCAC 58.148 36.000 9.99 0.00 0.00 4.16
5965 10828 6.432472 TGTTAACTGCATCATATGAAACCACA 59.568 34.615 9.99 3.29 0.00 4.17
5966 10829 5.571784 AACTGCATCATATGAAACCACAG 57.428 39.130 9.99 14.01 0.00 3.66
5967 10830 4.592942 ACTGCATCATATGAAACCACAGT 58.407 39.130 9.99 14.58 0.00 3.55
5968 10831 5.012239 ACTGCATCATATGAAACCACAGTT 58.988 37.500 9.99 2.53 38.03 3.16
5969 10832 5.124457 ACTGCATCATATGAAACCACAGTTC 59.876 40.000 9.99 0.00 34.19 3.01
5970 10833 5.008980 TGCATCATATGAAACCACAGTTCA 58.991 37.500 9.99 0.00 34.19 3.18
5971 10834 5.124297 TGCATCATATGAAACCACAGTTCAG 59.876 40.000 9.99 0.00 34.19 3.02
5972 10835 5.355071 GCATCATATGAAACCACAGTTCAGA 59.645 40.000 9.99 0.00 34.19 3.27
5973 10836 6.127925 GCATCATATGAAACCACAGTTCAGAA 60.128 38.462 9.99 0.00 34.19 3.02
5974 10837 7.415989 GCATCATATGAAACCACAGTTCAGAAT 60.416 37.037 9.99 0.00 34.19 2.40
5975 10838 8.464404 CATCATATGAAACCACAGTTCAGAATT 58.536 33.333 9.99 0.00 34.19 2.17
5976 10839 9.685276 ATCATATGAAACCACAGTTCAGAATTA 57.315 29.630 9.99 0.00 34.19 1.40
5977 10840 9.166173 TCATATGAAACCACAGTTCAGAATTAG 57.834 33.333 1.98 0.00 34.19 1.73
5978 10841 9.166173 CATATGAAACCACAGTTCAGAATTAGA 57.834 33.333 0.00 0.00 34.19 2.10
5979 10842 6.861065 TGAAACCACAGTTCAGAATTAGAC 57.139 37.500 0.00 0.00 34.19 2.59
5980 10843 5.465390 TGAAACCACAGTTCAGAATTAGACG 59.535 40.000 0.00 0.00 34.19 4.18
5981 10844 4.602340 ACCACAGTTCAGAATTAGACGT 57.398 40.909 0.00 0.00 0.00 4.34
5982 10845 4.557205 ACCACAGTTCAGAATTAGACGTC 58.443 43.478 7.70 7.70 0.00 4.34
5983 10846 3.608506 CCACAGTTCAGAATTAGACGTCG 59.391 47.826 10.46 0.00 0.00 5.12
5984 10847 3.059570 CACAGTTCAGAATTAGACGTCGC 59.940 47.826 10.46 0.00 0.00 5.19
5985 10848 3.242518 CAGTTCAGAATTAGACGTCGCA 58.757 45.455 10.46 0.41 0.00 5.10
5986 10849 3.859961 CAGTTCAGAATTAGACGTCGCAT 59.140 43.478 10.46 3.14 0.00 4.73
5987 10850 4.027295 CAGTTCAGAATTAGACGTCGCATC 60.027 45.833 10.46 7.66 0.00 3.91
5988 10851 3.079960 TCAGAATTAGACGTCGCATCC 57.920 47.619 10.46 1.09 0.00 3.51
5989 10852 2.425668 TCAGAATTAGACGTCGCATCCA 59.574 45.455 10.46 0.00 0.00 3.41
5990 10853 3.068165 TCAGAATTAGACGTCGCATCCAT 59.932 43.478 10.46 0.00 0.00 3.41
5991 10854 3.183172 CAGAATTAGACGTCGCATCCATG 59.817 47.826 10.46 1.76 0.00 3.66
5992 10855 2.154854 ATTAGACGTCGCATCCATGG 57.845 50.000 10.46 4.97 0.00 3.66
5993 10856 0.529773 TTAGACGTCGCATCCATGGC 60.530 55.000 6.96 0.00 0.00 4.40
5994 10857 1.671901 TAGACGTCGCATCCATGGCA 61.672 55.000 6.96 0.00 0.00 4.92
5995 10858 2.046411 ACGTCGCATCCATGGCAA 60.046 55.556 6.96 0.00 0.00 4.52
5996 10859 2.309764 GACGTCGCATCCATGGCAAC 62.310 60.000 6.96 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 77 6.096705 TCTCTTTCTGAATCAGATCCAGAGAC 59.903 42.308 26.77 0.00 40.10 3.36
156 177 2.213499 GCGACAAATGATACAGGGGAG 58.787 52.381 0.00 0.00 0.00 4.30
165 186 1.078497 TGGCCTCGCGACAAATGAT 60.078 52.632 3.71 0.00 0.00 2.45
256 286 2.203337 ACGAGGGCAAAAGCAGCA 60.203 55.556 0.00 0.00 0.00 4.41
257 287 2.256461 CACGAGGGCAAAAGCAGC 59.744 61.111 0.00 0.00 0.00 5.25
258 288 2.256461 GCACGAGGGCAAAAGCAG 59.744 61.111 0.00 0.00 0.00 4.24
259 289 3.659092 CGCACGAGGGCAAAAGCA 61.659 61.111 0.00 0.00 0.00 3.91
260 290 2.677573 AAACGCACGAGGGCAAAAGC 62.678 55.000 0.00 0.00 0.00 3.51
261 291 0.589223 TAAACGCACGAGGGCAAAAG 59.411 50.000 0.00 0.00 0.00 2.27
262 292 0.589223 CTAAACGCACGAGGGCAAAA 59.411 50.000 0.00 0.00 0.00 2.44
310 340 8.494016 AGAGAAGCCTTAATAAATACACACAC 57.506 34.615 0.00 0.00 0.00 3.82
345 415 2.558795 TCTCACCAGAAGAAGAACGGAG 59.441 50.000 0.00 0.00 0.00 4.63
347 417 2.558795 TCTCTCACCAGAAGAAGAACGG 59.441 50.000 0.00 0.00 0.00 4.44
349 419 3.932089 GCATCTCTCACCAGAAGAAGAAC 59.068 47.826 0.00 0.00 0.00 3.01
354 424 2.106566 GGAGCATCTCTCACCAGAAGA 58.893 52.381 0.00 0.00 43.70 2.87
361 438 0.250513 AAACCGGGAGCATCTCTCAC 59.749 55.000 6.32 0.00 43.70 3.51
375 452 6.370718 AGCAAAGATTGTACTACCTTAAACCG 59.629 38.462 0.00 0.00 0.00 4.44
384 461 6.127980 GGGGAAAAGAGCAAAGATTGTACTAC 60.128 42.308 0.00 0.00 0.00 2.73
385 462 5.944007 GGGGAAAAGAGCAAAGATTGTACTA 59.056 40.000 0.00 0.00 0.00 1.82
386 463 4.767409 GGGGAAAAGAGCAAAGATTGTACT 59.233 41.667 0.00 0.00 0.00 2.73
423 505 3.641436 TCTGCTTTTCCCCCTTTCTTTTC 59.359 43.478 0.00 0.00 0.00 2.29
436 518 7.525759 CAGAGGAAAGAAATACTCTGCTTTTC 58.474 38.462 7.50 0.00 46.97 2.29
502 584 2.241176 TCTGAACCCCAAGCGGATAAAT 59.759 45.455 0.00 0.00 0.00 1.40
503 585 1.631388 TCTGAACCCCAAGCGGATAAA 59.369 47.619 0.00 0.00 0.00 1.40
504 586 1.065709 GTCTGAACCCCAAGCGGATAA 60.066 52.381 0.00 0.00 0.00 1.75
509 591 1.247567 ATTTGTCTGAACCCCAAGCG 58.752 50.000 0.00 0.00 0.00 4.68
547 631 0.737219 GTGAAGCAGCATCATCCACC 59.263 55.000 3.15 0.00 0.00 4.61
614 708 9.295825 CTCTCTTTCTATCAGATTCCTAGCTAA 57.704 37.037 0.00 0.00 0.00 3.09
627 721 8.898761 GTGAGTGTTAGATCTCTCTTTCTATCA 58.101 37.037 0.00 0.00 32.66 2.15
652 746 5.705441 CAGAGAGAGTACAAGAGAACAGAGT 59.295 44.000 0.00 0.00 0.00 3.24
671 844 4.039973 ACAACAAGTAATTCCGGACAGAGA 59.960 41.667 1.83 0.00 0.00 3.10
717 890 8.697507 AATTACTTGTCTGAGAAATGGAAAGT 57.302 30.769 0.00 0.00 0.00 2.66
731 904 1.822990 TCGCTCCGGAATTACTTGTCT 59.177 47.619 5.23 0.00 0.00 3.41
748 921 6.484308 AGGAATAGAAACTAGTACTCTCTCGC 59.516 42.308 10.00 4.95 0.00 5.03
749 922 7.496591 ACAGGAATAGAAACTAGTACTCTCTCG 59.503 40.741 10.00 5.72 0.00 4.04
753 926 9.536510 AGAAACAGGAATAGAAACTAGTACTCT 57.463 33.333 0.00 11.16 0.00 3.24
850 1314 7.715249 AGCAGAACAAACTTACAGAAAGATGTA 59.285 33.333 0.00 0.00 37.61 2.29
861 1325 6.693113 CCTTTTCAGAAGCAGAACAAACTTAC 59.307 38.462 0.00 0.00 0.00 2.34
862 1326 6.183360 CCCTTTTCAGAAGCAGAACAAACTTA 60.183 38.462 0.00 0.00 0.00 2.24
934 1401 1.153086 CCTGCAGGGGTAGCATGTC 60.153 63.158 26.14 0.00 41.82 3.06
948 1415 0.251341 TTTCCCTTTCTGCTCCCTGC 60.251 55.000 0.00 0.00 43.25 4.85
1035 1504 1.858091 AAGTTGCAGTGTCAGACTCG 58.142 50.000 1.31 0.00 29.75 4.18
1390 1870 4.411327 TGAAACAAACTGTTGAAGAAGCG 58.589 39.130 0.00 0.00 40.14 4.68
1391 1871 5.287035 CACTGAAACAAACTGTTGAAGAAGC 59.713 40.000 0.00 0.00 40.14 3.86
1398 1878 7.429340 GTCTACATTCACTGAAACAAACTGTTG 59.571 37.037 0.00 0.00 40.14 3.33
1470 1950 5.337578 ACACACAACCAAAAGCAATTACT 57.662 34.783 0.00 0.00 0.00 2.24
1471 1951 6.699642 ACATACACACAACCAAAAGCAATTAC 59.300 34.615 0.00 0.00 0.00 1.89
1472 1952 6.699204 CACATACACACAACCAAAAGCAATTA 59.301 34.615 0.00 0.00 0.00 1.40
1488 1968 1.592064 CCTGCACACACACATACACA 58.408 50.000 0.00 0.00 0.00 3.72
1489 1969 0.874390 CCCTGCACACACACATACAC 59.126 55.000 0.00 0.00 0.00 2.90
1490 1970 0.761802 TCCCTGCACACACACATACA 59.238 50.000 0.00 0.00 0.00 2.29
1491 1971 1.739466 CATCCCTGCACACACACATAC 59.261 52.381 0.00 0.00 0.00 2.39
1492 1972 1.339920 CCATCCCTGCACACACACATA 60.340 52.381 0.00 0.00 0.00 2.29
1493 1973 0.609957 CCATCCCTGCACACACACAT 60.610 55.000 0.00 0.00 0.00 3.21
1604 2092 0.687354 TGAGTTGCTCCCAGAACTCC 59.313 55.000 9.19 0.00 45.05 3.85
2057 2975 6.746120 TCGTCTTATATTTAGGAACAGAGGC 58.254 40.000 0.00 0.00 0.00 4.70
2088 3006 4.741676 CCATGCCGCAAATCTCTAATTTTC 59.258 41.667 0.00 0.00 0.00 2.29
2090 3008 3.701040 ACCATGCCGCAAATCTCTAATTT 59.299 39.130 0.00 0.00 0.00 1.82
2119 3037 8.786826 AACATTCAGATCGAGTGGTTAATTAA 57.213 30.769 12.19 0.00 35.71 1.40
2200 3118 0.536724 TGTGGGTGATGGTCGATCTG 59.463 55.000 0.00 0.00 31.55 2.90
2371 3289 5.540911 TGGATGAACTTCCAAATGAAAAGC 58.459 37.500 6.91 0.00 42.82 3.51
2455 3373 1.079057 GAACTTGAGGGTCTCGGCC 60.079 63.158 0.00 0.00 32.35 6.13
2467 3385 2.614057 GACGAGGGCCATATTGAACTTG 59.386 50.000 6.18 0.00 0.00 3.16
2470 3388 1.141053 AGGACGAGGGCCATATTGAAC 59.859 52.381 6.18 0.00 0.00 3.18
2530 3448 4.037208 ACAACAGCTCCAATCTTTGTCTTG 59.963 41.667 0.00 0.00 0.00 3.02
2598 3516 6.292919 GCTCTTACTTAATGCAGAAATACCGG 60.293 42.308 0.00 0.00 0.00 5.28
2599 3517 6.292919 GGCTCTTACTTAATGCAGAAATACCG 60.293 42.308 0.00 0.00 0.00 4.02
2622 6767 3.326297 AGCAGGTTATTCTCAGGATAGGC 59.674 47.826 0.00 0.00 0.00 3.93
2623 6768 4.590647 TCAGCAGGTTATTCTCAGGATAGG 59.409 45.833 0.00 0.00 0.00 2.57
2624 6769 5.798125 TCAGCAGGTTATTCTCAGGATAG 57.202 43.478 0.00 0.00 0.00 2.08
2687 7004 7.176515 ACCTGCACAATAGAACATACAAATTGA 59.823 33.333 0.00 0.00 32.99 2.57
2688 7005 7.315142 ACCTGCACAATAGAACATACAAATTG 58.685 34.615 0.00 0.00 34.48 2.32
2690 7007 8.574251 TTACCTGCACAATAGAACATACAAAT 57.426 30.769 0.00 0.00 0.00 2.32
2696 7013 6.356556 TGCTATTACCTGCACAATAGAACAT 58.643 36.000 16.64 0.00 37.04 2.71
2697 7014 5.739959 TGCTATTACCTGCACAATAGAACA 58.260 37.500 16.64 7.59 37.04 3.18
2698 7015 5.277538 GCTGCTATTACCTGCACAATAGAAC 60.278 44.000 16.64 5.84 37.04 3.01
2699 7016 4.816385 GCTGCTATTACCTGCACAATAGAA 59.184 41.667 16.64 9.12 37.04 2.10
2700 7017 4.141733 TGCTGCTATTACCTGCACAATAGA 60.142 41.667 16.64 6.27 37.04 1.98
2701 7018 4.129380 TGCTGCTATTACCTGCACAATAG 58.871 43.478 0.00 11.22 37.65 1.73
2771 7098 0.813210 GGAGCAGCAGAGGGAAATCG 60.813 60.000 0.00 0.00 0.00 3.34
2968 7295 6.127196 ACCAGTCATCTTCTTGAGAGGATTAC 60.127 42.308 8.55 8.55 45.88 1.89
2975 7302 5.551305 TGAAACCAGTCATCTTCTTGAGA 57.449 39.130 0.00 0.00 39.13 3.27
3059 7386 7.329717 CACTCCTTTGTTAGATACAGACTTGTC 59.670 40.741 0.00 0.00 38.19 3.18
3077 7404 3.881089 CCGTTTTCTTGTACCACTCCTTT 59.119 43.478 0.00 0.00 0.00 3.11
3107 7434 9.224486 TGGCATTAATATAGAGGGCATAGATAA 57.776 33.333 0.00 0.00 0.00 1.75
3390 7735 7.039363 TGTTAAATGGCTTGGCACTTATTAAGT 60.039 33.333 3.16 3.16 44.06 2.24
3467 7812 8.138074 GGCTAAGAAAGAGTGAATTCAGTTTTT 58.862 33.333 24.33 24.33 36.63 1.94
3468 7813 7.503902 AGGCTAAGAAAGAGTGAATTCAGTTTT 59.496 33.333 16.80 14.31 0.00 2.43
3469 7814 7.001073 AGGCTAAGAAAGAGTGAATTCAGTTT 58.999 34.615 16.80 12.49 0.00 2.66
3470 7815 6.538263 AGGCTAAGAAAGAGTGAATTCAGTT 58.462 36.000 16.80 4.71 0.00 3.16
3471 7816 6.120507 AGGCTAAGAAAGAGTGAATTCAGT 57.879 37.500 15.73 15.73 0.00 3.41
3499 7844 7.655732 GCAACCTGTTTAATTAGGACACAAAAT 59.344 33.333 11.35 0.00 37.52 1.82
3509 7854 9.561069 AGGATATACTGCAACCTGTTTAATTAG 57.439 33.333 0.00 0.00 0.00 1.73
3510 7855 9.337396 CAGGATATACTGCAACCTGTTTAATTA 57.663 33.333 0.89 0.00 41.91 1.40
3511 7856 7.285401 CCAGGATATACTGCAACCTGTTTAATT 59.715 37.037 9.70 0.00 44.33 1.40
3512 7857 6.772716 CCAGGATATACTGCAACCTGTTTAAT 59.227 38.462 9.70 0.00 44.33 1.40
3526 7871 4.446311 GCCAACACATTCCCAGGATATACT 60.446 45.833 0.00 0.00 0.00 2.12
3610 7955 2.659897 GGAGATACAGCGCCGCAG 60.660 66.667 13.36 5.69 0.00 5.18
3733 8079 1.923356 ACGGAAAATGGATGCCTGTT 58.077 45.000 0.00 0.00 0.00 3.16
3765 8111 4.341235 TGGACACTGAGGTAATTATCTCCG 59.659 45.833 20.61 17.12 32.42 4.63
3900 8247 1.167851 CGGGTGCATGACATGTTTCT 58.832 50.000 16.62 0.00 0.00 2.52
3901 8248 1.164411 TCGGGTGCATGACATGTTTC 58.836 50.000 16.62 7.50 0.00 2.78
3904 8251 0.677731 CCTTCGGGTGCATGACATGT 60.678 55.000 16.62 0.00 0.00 3.21
3906 8253 1.750399 GCCTTCGGGTGCATGACAT 60.750 57.895 0.00 0.00 37.45 3.06
3907 8254 2.359850 GCCTTCGGGTGCATGACA 60.360 61.111 0.00 0.00 37.45 3.58
3908 8255 3.134127 GGCCTTCGGGTGCATGAC 61.134 66.667 0.00 0.00 37.45 3.06
3909 8256 4.776322 CGGCCTTCGGGTGCATGA 62.776 66.667 0.00 0.00 37.45 3.07
3910 8257 4.776322 TCGGCCTTCGGGTGCATG 62.776 66.667 0.00 0.00 39.77 4.06
3912 8259 4.257654 TTTCGGCCTTCGGGTGCA 62.258 61.111 0.00 0.00 39.77 4.57
3913 8260 3.733960 GTTTCGGCCTTCGGGTGC 61.734 66.667 0.00 0.00 39.77 5.01
3914 8261 1.241315 ATTGTTTCGGCCTTCGGGTG 61.241 55.000 0.00 0.00 39.77 4.61
3915 8262 1.074248 ATTGTTTCGGCCTTCGGGT 59.926 52.632 0.00 0.00 39.77 5.28
3916 8263 1.241315 ACATTGTTTCGGCCTTCGGG 61.241 55.000 0.00 0.00 39.77 5.14
3917 8264 0.109781 CACATTGTTTCGGCCTTCGG 60.110 55.000 0.00 0.00 39.77 4.30
3919 8266 1.606668 TCACACATTGTTTCGGCCTTC 59.393 47.619 0.00 0.00 0.00 3.46
3924 8271 5.964887 AATTTTGTCACACATTGTTTCGG 57.035 34.783 0.00 0.00 0.00 4.30
3925 8272 7.678194 AGTAATTTTGTCACACATTGTTTCG 57.322 32.000 0.00 0.00 0.00 3.46
3933 8308 6.887545 CCCCCTATAAGTAATTTTGTCACACA 59.112 38.462 0.00 0.00 0.00 3.72
3942 8317 5.131475 TCGAAGCACCCCCTATAAGTAATTT 59.869 40.000 0.00 0.00 0.00 1.82
3949 8324 2.901839 GGTATCGAAGCACCCCCTATAA 59.098 50.000 0.00 0.00 0.00 0.98
3965 8340 5.758924 GATACATTTCGGGCAAAAGGTATC 58.241 41.667 22.13 22.13 46.61 2.24
3967 8342 4.590918 TGATACATTTCGGGCAAAAGGTA 58.409 39.130 10.21 10.21 39.05 3.08
3968 8343 3.426615 TGATACATTTCGGGCAAAAGGT 58.573 40.909 7.01 7.01 37.04 3.50
3969 8344 4.654091 ATGATACATTTCGGGCAAAAGG 57.346 40.909 0.00 0.00 0.00 3.11
3973 8348 6.514870 GCAAGAATATGATACATTTCGGGCAA 60.515 38.462 0.00 0.00 0.00 4.52
3975 8350 5.182001 AGCAAGAATATGATACATTTCGGGC 59.818 40.000 0.00 0.00 0.00 6.13
3976 8351 6.808008 AGCAAGAATATGATACATTTCGGG 57.192 37.500 0.00 0.00 0.00 5.14
3977 8352 9.599322 GTTAAGCAAGAATATGATACATTTCGG 57.401 33.333 0.00 0.00 0.00 4.30
3992 8645 9.515020 CAGACATTTAAGTTTGTTAAGCAAGAA 57.485 29.630 0.00 0.00 38.47 2.52
4003 8656 7.648908 TCACAATGCTTCAGACATTTAAGTTTG 59.351 33.333 0.00 0.00 35.58 2.93
4059 8712 2.760092 TCCATCAAGTAAAGCAATGGCC 59.240 45.455 0.00 0.00 42.56 5.36
4193 8853 4.516698 TGAATCAACTGAGCAAGTTCCTTC 59.483 41.667 2.06 8.40 46.60 3.46
4203 8863 6.560253 TTTTACTCCTTGAATCAACTGAGC 57.440 37.500 14.26 0.00 0.00 4.26
4204 8864 9.219603 TGTATTTTACTCCTTGAATCAACTGAG 57.780 33.333 13.26 13.26 0.00 3.35
4232 8892 9.396022 GGATCAGAACAGGAGTTTGAAAATATA 57.604 33.333 0.00 0.00 38.30 0.86
4233 8893 8.112183 AGGATCAGAACAGGAGTTTGAAAATAT 58.888 33.333 0.00 0.00 38.30 1.28
4234 8894 7.461749 AGGATCAGAACAGGAGTTTGAAAATA 58.538 34.615 0.00 0.00 38.30 1.40
4235 8895 6.310149 AGGATCAGAACAGGAGTTTGAAAAT 58.690 36.000 0.00 0.00 38.30 1.82
4236 8896 5.694995 AGGATCAGAACAGGAGTTTGAAAA 58.305 37.500 0.00 0.00 38.30 2.29
4292 8964 6.446781 CCATATGGTCCATCAATCATAAGC 57.553 41.667 14.09 0.00 0.00 3.09
4382 9054 3.760151 CCTTCACAATGCTGATCAAAGGA 59.240 43.478 11.53 0.00 35.17 3.36
4457 9129 3.562779 CTTTGCCTTGCCACTGCCG 62.563 63.158 0.00 0.00 36.33 5.69
4505 9180 1.132657 TCCCTTGTGACCCAGTAGGAA 60.133 52.381 0.00 0.00 39.89 3.36
4616 9291 1.741770 GCCCTCTTGGTACACGCTG 60.742 63.158 0.00 0.00 39.29 5.18
4830 9512 6.770746 ACTAGTCACCGACATTTGTAGTAT 57.229 37.500 0.00 0.00 34.60 2.12
4872 9554 6.364945 AGCAGAATTAAATTAAGGAGCGTC 57.635 37.500 0.00 0.00 0.00 5.19
4877 9559 6.607198 CCCCTGAAGCAGAATTAAATTAAGGA 59.393 38.462 0.00 0.00 32.44 3.36
5018 9700 8.127150 ACATGCTCTTACATCAGCTACATATA 57.873 34.615 0.00 0.00 36.53 0.86
5096 9798 4.704965 AGAGTGTCTAAACCAGTCCAAAC 58.295 43.478 0.00 0.00 33.60 2.93
5117 9951 9.468532 TTGTTCAGTATCGAAATCTCATGATAG 57.531 33.333 0.00 0.00 31.70 2.08
5129 9963 4.492791 TCACGAGTTGTTCAGTATCGAA 57.507 40.909 0.00 0.00 37.16 3.71
5144 9979 1.800805 AGCATCACCAGTTTCACGAG 58.199 50.000 0.00 0.00 0.00 4.18
5287 10125 3.509967 TGGAGCTATGTTCGTTCTTCAGA 59.490 43.478 0.00 0.00 0.00 3.27
5289 10127 3.953712 TGGAGCTATGTTCGTTCTTCA 57.046 42.857 0.00 0.00 0.00 3.02
5330 10168 0.822164 ACTACGGTACAGGTGGCATC 59.178 55.000 0.00 0.00 0.00 3.91
5430 10272 5.710099 GGGTGAAGTCACTAATCCAAATGAA 59.290 40.000 11.07 0.00 45.73 2.57
5464 10308 6.043243 GGTCATGTAATTCCCTAGGAGAATGA 59.957 42.308 19.99 13.33 34.23 2.57
5465 10309 6.183361 TGGTCATGTAATTCCCTAGGAGAATG 60.183 42.308 19.99 12.28 34.23 2.67
5466 10310 5.911178 TGGTCATGTAATTCCCTAGGAGAAT 59.089 40.000 11.48 14.29 35.46 2.40
5468 10312 4.654262 GTGGTCATGTAATTCCCTAGGAGA 59.346 45.833 11.48 2.75 31.21 3.71
5469 10313 4.408921 TGTGGTCATGTAATTCCCTAGGAG 59.591 45.833 11.48 0.00 31.21 3.69
5473 10336 6.381498 TTCTTGTGGTCATGTAATTCCCTA 57.619 37.500 0.00 0.00 0.00 3.53
5486 10349 4.557205 AGTCTTACGACATTCTTGTGGTC 58.443 43.478 1.85 0.00 42.88 4.02
5730 10593 3.735037 GAGGAAACCCTAGCCGCCG 62.735 68.421 0.00 0.00 33.25 6.46
5731 10594 2.189784 GAGGAAACCCTAGCCGCC 59.810 66.667 0.00 0.00 33.25 6.13
5732 10595 2.189784 GGAGGAAACCCTAGCCGC 59.810 66.667 0.00 0.00 33.25 6.53
5733 10596 2.908796 GGGAGGAAACCCTAGCCG 59.091 66.667 0.00 0.00 45.90 5.52
5740 10603 1.680249 GCTCATGACTGGGAGGAAACC 60.680 57.143 0.00 0.00 0.00 3.27
5741 10604 1.743996 GCTCATGACTGGGAGGAAAC 58.256 55.000 0.00 0.00 0.00 2.78
5742 10605 0.250234 CGCTCATGACTGGGAGGAAA 59.750 55.000 0.00 0.00 0.00 3.13
5743 10606 1.617018 CCGCTCATGACTGGGAGGAA 61.617 60.000 0.00 0.00 45.15 3.36
5744 10607 2.060383 CCGCTCATGACTGGGAGGA 61.060 63.158 0.00 0.00 45.15 3.71
5745 10608 2.503061 CCGCTCATGACTGGGAGG 59.497 66.667 0.00 0.00 36.41 4.30
5746 10609 2.503061 CCCGCTCATGACTGGGAG 59.497 66.667 18.91 0.00 44.88 4.30
5747 10610 3.083349 CCCCGCTCATGACTGGGA 61.083 66.667 23.49 0.00 44.88 4.37
5748 10611 4.864334 GCCCCGCTCATGACTGGG 62.864 72.222 17.33 17.33 41.56 4.45
5750 10613 4.147449 TCGCCCCGCTCATGACTG 62.147 66.667 0.00 0.00 0.00 3.51
5751 10614 4.148825 GTCGCCCCGCTCATGACT 62.149 66.667 0.00 0.00 0.00 3.41
5752 10615 4.451150 TGTCGCCCCGCTCATGAC 62.451 66.667 0.00 0.00 0.00 3.06
5753 10616 4.451150 GTGTCGCCCCGCTCATGA 62.451 66.667 0.00 0.00 0.00 3.07
5754 10617 4.758251 TGTGTCGCCCCGCTCATG 62.758 66.667 0.00 0.00 0.00 3.07
5755 10618 3.958147 CTTGTGTCGCCCCGCTCAT 62.958 63.158 0.00 0.00 0.00 2.90
5756 10619 4.680237 CTTGTGTCGCCCCGCTCA 62.680 66.667 0.00 0.00 0.00 4.26
5757 10620 4.373116 TCTTGTGTCGCCCCGCTC 62.373 66.667 0.00 0.00 0.00 5.03
5758 10621 4.379243 CTCTTGTGTCGCCCCGCT 62.379 66.667 0.00 0.00 0.00 5.52
5760 10623 3.649277 CTCCTCTTGTGTCGCCCCG 62.649 68.421 0.00 0.00 0.00 5.73
5761 10624 2.266055 CTCCTCTTGTGTCGCCCC 59.734 66.667 0.00 0.00 0.00 5.80
5762 10625 2.266055 CCTCCTCTTGTGTCGCCC 59.734 66.667 0.00 0.00 0.00 6.13
5763 10626 2.266055 CCCTCCTCTTGTGTCGCC 59.734 66.667 0.00 0.00 0.00 5.54
5764 10627 2.266055 CCCCTCCTCTTGTGTCGC 59.734 66.667 0.00 0.00 0.00 5.19
5765 10628 2.982130 CCCCCTCCTCTTGTGTCG 59.018 66.667 0.00 0.00 0.00 4.35
5779 10642 1.062044 ACAATCTACTCCTCCTCCCCC 60.062 57.143 0.00 0.00 0.00 5.40
5780 10643 2.321719 GACAATCTACTCCTCCTCCCC 58.678 57.143 0.00 0.00 0.00 4.81
5781 10644 3.033659 TGACAATCTACTCCTCCTCCC 57.966 52.381 0.00 0.00 0.00 4.30
5782 10645 4.219115 TGATGACAATCTACTCCTCCTCC 58.781 47.826 0.00 0.00 33.61 4.30
5783 10646 5.538053 TCATGATGACAATCTACTCCTCCTC 59.462 44.000 0.00 0.00 33.61 3.71
5784 10647 5.304101 GTCATGATGACAATCTACTCCTCCT 59.696 44.000 19.96 0.00 46.22 3.69
5785 10648 5.537188 GTCATGATGACAATCTACTCCTCC 58.463 45.833 19.96 0.00 46.22 4.30
5798 10661 3.126831 GTCTCATTCCGGTCATGATGAC 58.873 50.000 16.95 16.95 46.23 3.06
5799 10662 3.033909 AGTCTCATTCCGGTCATGATGA 58.966 45.455 16.36 13.34 30.15 2.92
5800 10663 3.465742 AGTCTCATTCCGGTCATGATG 57.534 47.619 16.36 11.81 30.15 3.07
5801 10664 4.494091 AAAGTCTCATTCCGGTCATGAT 57.506 40.909 16.36 3.30 30.15 2.45
5802 10665 3.981071 AAAGTCTCATTCCGGTCATGA 57.019 42.857 15.51 15.51 0.00 3.07
5803 10666 4.093998 CAGAAAAGTCTCATTCCGGTCATG 59.906 45.833 0.00 5.65 28.78 3.07
5804 10667 4.256920 CAGAAAAGTCTCATTCCGGTCAT 58.743 43.478 0.00 0.00 28.78 3.06
5805 10668 3.071023 ACAGAAAAGTCTCATTCCGGTCA 59.929 43.478 0.00 0.00 28.78 4.02
5806 10669 3.433615 CACAGAAAAGTCTCATTCCGGTC 59.566 47.826 0.00 0.00 28.78 4.79
5807 10670 3.181454 ACACAGAAAAGTCTCATTCCGGT 60.181 43.478 0.00 0.00 28.78 5.28
5808 10671 3.403038 ACACAGAAAAGTCTCATTCCGG 58.597 45.455 0.00 0.00 28.78 5.14
5809 10672 5.926542 TCTTACACAGAAAAGTCTCATTCCG 59.073 40.000 0.00 0.00 28.78 4.30
5810 10673 6.147985 GGTCTTACACAGAAAAGTCTCATTCC 59.852 42.308 0.00 0.00 31.28 3.01
5811 10674 6.931840 AGGTCTTACACAGAAAAGTCTCATTC 59.068 38.462 0.00 0.00 31.28 2.67
5812 10675 6.708054 CAGGTCTTACACAGAAAAGTCTCATT 59.292 38.462 0.00 0.00 31.28 2.57
5813 10676 6.226787 CAGGTCTTACACAGAAAAGTCTCAT 58.773 40.000 0.00 0.00 31.28 2.90
5814 10677 5.601662 CAGGTCTTACACAGAAAAGTCTCA 58.398 41.667 0.00 0.00 31.28 3.27
5815 10678 4.449405 GCAGGTCTTACACAGAAAAGTCTC 59.551 45.833 0.00 0.00 31.28 3.36
5816 10679 4.141711 TGCAGGTCTTACACAGAAAAGTCT 60.142 41.667 0.00 0.00 31.28 3.24
5817 10680 4.024809 GTGCAGGTCTTACACAGAAAAGTC 60.025 45.833 0.00 0.00 34.43 3.01
5818 10681 3.877508 GTGCAGGTCTTACACAGAAAAGT 59.122 43.478 0.00 0.00 34.43 2.66
5819 10682 3.251004 GGTGCAGGTCTTACACAGAAAAG 59.749 47.826 0.00 0.00 36.00 2.27
5820 10683 3.211045 GGTGCAGGTCTTACACAGAAAA 58.789 45.455 0.00 0.00 36.00 2.29
5821 10684 2.486548 GGGTGCAGGTCTTACACAGAAA 60.487 50.000 0.00 0.00 36.00 2.52
5822 10685 1.071699 GGGTGCAGGTCTTACACAGAA 59.928 52.381 0.00 0.00 36.00 3.02
5823 10686 0.685097 GGGTGCAGGTCTTACACAGA 59.315 55.000 0.00 0.00 36.00 3.41
5824 10687 0.687354 AGGGTGCAGGTCTTACACAG 59.313 55.000 0.00 0.00 36.00 3.66
5825 10688 1.071699 GAAGGGTGCAGGTCTTACACA 59.928 52.381 0.00 0.00 36.00 3.72
5826 10689 1.348036 AGAAGGGTGCAGGTCTTACAC 59.652 52.381 0.00 0.00 0.00 2.90
5827 10690 1.729586 AGAAGGGTGCAGGTCTTACA 58.270 50.000 0.00 0.00 0.00 2.41
5828 10691 2.615747 GGAAGAAGGGTGCAGGTCTTAC 60.616 54.545 0.00 0.00 30.56 2.34
5829 10692 1.628846 GGAAGAAGGGTGCAGGTCTTA 59.371 52.381 0.00 0.00 30.56 2.10
5830 10693 0.402121 GGAAGAAGGGTGCAGGTCTT 59.598 55.000 0.00 0.00 33.07 3.01
5831 10694 1.492993 GGGAAGAAGGGTGCAGGTCT 61.493 60.000 0.00 0.00 0.00 3.85
5832 10695 1.002011 GGGAAGAAGGGTGCAGGTC 60.002 63.158 0.00 0.00 0.00 3.85
5833 10696 1.464198 AGGGAAGAAGGGTGCAGGT 60.464 57.895 0.00 0.00 0.00 4.00
5834 10697 1.001641 CAGGGAAGAAGGGTGCAGG 60.002 63.158 0.00 0.00 0.00 4.85
5835 10698 1.001641 CCAGGGAAGAAGGGTGCAG 60.002 63.158 0.00 0.00 0.00 4.41
5836 10699 2.538141 CCCAGGGAAGAAGGGTGCA 61.538 63.158 0.00 0.00 37.81 4.57
5837 10700 2.231380 TCCCAGGGAAGAAGGGTGC 61.231 63.158 5.36 0.00 43.31 5.01
5838 10701 1.133809 TGTCCCAGGGAAGAAGGGTG 61.134 60.000 10.89 0.00 43.31 4.61
5839 10702 0.402861 TTGTCCCAGGGAAGAAGGGT 60.403 55.000 10.89 0.00 43.31 4.34
5840 10703 0.329596 CTTGTCCCAGGGAAGAAGGG 59.670 60.000 10.89 0.00 44.22 3.95
5841 10704 0.329596 CCTTGTCCCAGGGAAGAAGG 59.670 60.000 24.66 24.66 37.30 3.46
5842 10705 1.068121 ACCTTGTCCCAGGGAAGAAG 58.932 55.000 10.89 15.06 38.42 2.85
5843 10706 2.266279 CTACCTTGTCCCAGGGAAGAA 58.734 52.381 10.89 5.33 38.42 2.52
5844 10707 1.151413 ACTACCTTGTCCCAGGGAAGA 59.849 52.381 10.89 0.07 38.42 2.87
5845 10708 1.657804 ACTACCTTGTCCCAGGGAAG 58.342 55.000 10.89 4.76 38.42 3.46
5846 10709 3.278987 TTACTACCTTGTCCCAGGGAA 57.721 47.619 10.89 0.00 38.42 3.97
5847 10710 3.278987 TTTACTACCTTGTCCCAGGGA 57.721 47.619 3.01 3.01 38.42 4.20
5848 10711 4.270008 CATTTTACTACCTTGTCCCAGGG 58.730 47.826 0.00 0.00 38.42 4.45
5849 10712 3.694566 GCATTTTACTACCTTGTCCCAGG 59.305 47.826 0.00 0.00 40.23 4.45
5850 10713 3.694566 GGCATTTTACTACCTTGTCCCAG 59.305 47.826 0.00 0.00 0.00 4.45
5851 10714 3.692690 GGCATTTTACTACCTTGTCCCA 58.307 45.455 0.00 0.00 0.00 4.37
5852 10715 2.681344 CGGCATTTTACTACCTTGTCCC 59.319 50.000 0.00 0.00 0.00 4.46
5853 10716 2.681344 CCGGCATTTTACTACCTTGTCC 59.319 50.000 0.00 0.00 0.00 4.02
5854 10717 3.340928 ACCGGCATTTTACTACCTTGTC 58.659 45.455 0.00 0.00 0.00 3.18
5855 10718 3.340928 GACCGGCATTTTACTACCTTGT 58.659 45.455 0.00 0.00 0.00 3.16
5856 10719 2.681344 GGACCGGCATTTTACTACCTTG 59.319 50.000 0.00 0.00 0.00 3.61
5857 10720 2.306512 TGGACCGGCATTTTACTACCTT 59.693 45.455 0.00 0.00 0.00 3.50
5858 10721 1.910671 TGGACCGGCATTTTACTACCT 59.089 47.619 0.00 0.00 0.00 3.08
5859 10722 2.406596 TGGACCGGCATTTTACTACC 57.593 50.000 0.00 0.00 0.00 3.18
5860 10723 4.638865 AGATTTGGACCGGCATTTTACTAC 59.361 41.667 0.00 0.00 0.00 2.73
5861 10724 4.850680 AGATTTGGACCGGCATTTTACTA 58.149 39.130 0.00 0.00 0.00 1.82
5862 10725 3.697166 AGATTTGGACCGGCATTTTACT 58.303 40.909 0.00 0.00 0.00 2.24
5863 10726 5.106078 TGTTAGATTTGGACCGGCATTTTAC 60.106 40.000 0.00 0.00 0.00 2.01
5864 10727 5.010933 TGTTAGATTTGGACCGGCATTTTA 58.989 37.500 0.00 0.00 0.00 1.52
5865 10728 3.829601 TGTTAGATTTGGACCGGCATTTT 59.170 39.130 0.00 0.00 0.00 1.82
5866 10729 3.426615 TGTTAGATTTGGACCGGCATTT 58.573 40.909 0.00 0.00 0.00 2.32
5867 10730 3.080300 TGTTAGATTTGGACCGGCATT 57.920 42.857 0.00 0.00 0.00 3.56
5868 10731 2.799126 TGTTAGATTTGGACCGGCAT 57.201 45.000 0.00 0.00 0.00 4.40
5869 10732 2.570415 TTGTTAGATTTGGACCGGCA 57.430 45.000 0.00 0.00 0.00 5.69
5870 10733 4.450082 AATTTGTTAGATTTGGACCGGC 57.550 40.909 0.00 0.00 0.00 6.13
5871 10734 5.778862 ACAAATTTGTTAGATTTGGACCGG 58.221 37.500 18.13 0.00 44.70 5.28
5885 10748 7.225734 GGTATTACAAGGCAACAACAAATTTGT 59.774 33.333 18.13 18.13 44.72 2.83
5886 10749 7.225538 TGGTATTACAAGGCAACAACAAATTTG 59.774 33.333 16.67 16.67 41.41 2.32
5887 10750 7.225734 GTGGTATTACAAGGCAACAACAAATTT 59.774 33.333 0.00 0.00 41.41 1.82
5888 10751 6.704050 GTGGTATTACAAGGCAACAACAAATT 59.296 34.615 0.00 0.00 41.41 1.82
5889 10752 6.220201 GTGGTATTACAAGGCAACAACAAAT 58.780 36.000 0.00 0.00 41.41 2.32
5890 10753 5.593010 GTGGTATTACAAGGCAACAACAAA 58.407 37.500 0.00 0.00 41.41 2.83
5891 10754 4.261238 CGTGGTATTACAAGGCAACAACAA 60.261 41.667 0.00 0.00 41.41 2.83
5892 10755 3.251245 CGTGGTATTACAAGGCAACAACA 59.749 43.478 0.00 0.00 41.41 3.33
5893 10756 3.365565 CCGTGGTATTACAAGGCAACAAC 60.366 47.826 0.00 0.00 41.41 3.32
5894 10757 2.814919 CCGTGGTATTACAAGGCAACAA 59.185 45.455 0.00 0.00 41.41 2.83
5895 10758 2.224572 ACCGTGGTATTACAAGGCAACA 60.225 45.455 0.00 0.00 42.74 3.33
5896 10759 2.429478 ACCGTGGTATTACAAGGCAAC 58.571 47.619 0.00 0.00 42.74 4.17
5897 10760 2.863132 ACCGTGGTATTACAAGGCAA 57.137 45.000 0.00 0.00 42.74 4.52
5898 10761 2.038689 TGAACCGTGGTATTACAAGGCA 59.961 45.455 0.00 0.00 42.74 4.75
5899 10762 2.676342 CTGAACCGTGGTATTACAAGGC 59.324 50.000 0.00 0.00 42.74 4.35
5900 10763 4.196626 TCTGAACCGTGGTATTACAAGG 57.803 45.455 0.00 0.00 44.24 3.61
5901 10764 6.737254 AAATCTGAACCGTGGTATTACAAG 57.263 37.500 0.00 0.00 0.00 3.16
5902 10765 8.618702 TTAAAATCTGAACCGTGGTATTACAA 57.381 30.769 0.00 0.00 0.00 2.41
5903 10766 8.618702 TTTAAAATCTGAACCGTGGTATTACA 57.381 30.769 0.00 0.00 0.00 2.41
5906 10769 9.418045 CAATTTTAAAATCTGAACCGTGGTATT 57.582 29.630 13.68 0.00 0.00 1.89
5907 10770 8.798402 TCAATTTTAAAATCTGAACCGTGGTAT 58.202 29.630 13.68 0.00 0.00 2.73
5908 10771 8.167605 TCAATTTTAAAATCTGAACCGTGGTA 57.832 30.769 13.68 0.00 0.00 3.25
5909 10772 7.045126 TCAATTTTAAAATCTGAACCGTGGT 57.955 32.000 13.68 0.00 0.00 4.16
5910 10773 7.938563 TTCAATTTTAAAATCTGAACCGTGG 57.061 32.000 21.57 0.00 0.00 4.94
5927 10790 9.545105 TGATGCAGTTAACAGATTTTTCAATTT 57.455 25.926 8.61 0.00 0.00 1.82
5928 10791 9.715121 ATGATGCAGTTAACAGATTTTTCAATT 57.285 25.926 8.61 0.00 0.00 2.32
5931 10794 9.791820 CATATGATGCAGTTAACAGATTTTTCA 57.208 29.630 8.61 2.26 0.00 2.69
5935 10798 9.793252 GTTTCATATGATGCAGTTAACAGATTT 57.207 29.630 6.17 0.00 0.00 2.17
5936 10799 8.408601 GGTTTCATATGATGCAGTTAACAGATT 58.591 33.333 6.17 0.00 0.00 2.40
5937 10800 7.557358 TGGTTTCATATGATGCAGTTAACAGAT 59.443 33.333 6.17 0.00 0.00 2.90
5938 10801 6.883756 TGGTTTCATATGATGCAGTTAACAGA 59.116 34.615 6.17 0.00 0.00 3.41
5939 10802 6.968904 GTGGTTTCATATGATGCAGTTAACAG 59.031 38.462 6.17 0.17 0.00 3.16
5940 10803 6.432472 TGTGGTTTCATATGATGCAGTTAACA 59.568 34.615 6.17 1.61 0.00 2.41
5941 10804 6.851609 TGTGGTTTCATATGATGCAGTTAAC 58.148 36.000 6.17 5.99 0.00 2.01
5942 10805 6.658816 ACTGTGGTTTCATATGATGCAGTTAA 59.341 34.615 6.17 0.00 31.63 2.01
5943 10806 6.179756 ACTGTGGTTTCATATGATGCAGTTA 58.820 36.000 6.17 0.00 31.63 2.24
5944 10807 5.012239 ACTGTGGTTTCATATGATGCAGTT 58.988 37.500 6.17 0.88 31.63 3.16
5945 10808 4.592942 ACTGTGGTTTCATATGATGCAGT 58.407 39.130 6.17 12.64 0.00 4.40
5946 10809 5.124297 TGAACTGTGGTTTCATATGATGCAG 59.876 40.000 6.17 12.09 35.58 4.41
5947 10810 5.008980 TGAACTGTGGTTTCATATGATGCA 58.991 37.500 6.17 0.00 35.58 3.96
5948 10811 5.355071 TCTGAACTGTGGTTTCATATGATGC 59.645 40.000 6.17 2.50 35.58 3.91
5949 10812 6.990341 TCTGAACTGTGGTTTCATATGATG 57.010 37.500 6.17 0.00 35.58 3.07
5950 10813 8.585471 AATTCTGAACTGTGGTTTCATATGAT 57.415 30.769 6.17 0.00 35.58 2.45
5951 10814 9.166173 CTAATTCTGAACTGTGGTTTCATATGA 57.834 33.333 0.00 0.00 35.58 2.15
5952 10815 9.166173 TCTAATTCTGAACTGTGGTTTCATATG 57.834 33.333 0.00 0.00 35.58 1.78
5953 10816 9.167311 GTCTAATTCTGAACTGTGGTTTCATAT 57.833 33.333 0.00 0.00 35.58 1.78
5954 10817 7.330946 CGTCTAATTCTGAACTGTGGTTTCATA 59.669 37.037 0.00 0.00 35.58 2.15
5955 10818 6.147821 CGTCTAATTCTGAACTGTGGTTTCAT 59.852 38.462 0.00 0.00 35.58 2.57
5956 10819 5.465390 CGTCTAATTCTGAACTGTGGTTTCA 59.535 40.000 0.00 0.00 35.58 2.69
5957 10820 5.465724 ACGTCTAATTCTGAACTGTGGTTTC 59.534 40.000 0.00 0.00 35.58 2.78
5958 10821 5.365619 ACGTCTAATTCTGAACTGTGGTTT 58.634 37.500 0.00 0.00 35.58 3.27
5959 10822 4.957296 ACGTCTAATTCTGAACTGTGGTT 58.043 39.130 0.00 0.00 38.52 3.67
5960 10823 4.557205 GACGTCTAATTCTGAACTGTGGT 58.443 43.478 8.70 0.00 0.00 4.16
5961 10824 3.608506 CGACGTCTAATTCTGAACTGTGG 59.391 47.826 14.70 0.00 0.00 4.17
5962 10825 3.059570 GCGACGTCTAATTCTGAACTGTG 59.940 47.826 14.70 0.00 0.00 3.66
5963 10826 3.243336 GCGACGTCTAATTCTGAACTGT 58.757 45.455 14.70 0.00 0.00 3.55
5964 10827 3.242518 TGCGACGTCTAATTCTGAACTG 58.757 45.455 14.70 0.00 0.00 3.16
5965 10828 3.570926 TGCGACGTCTAATTCTGAACT 57.429 42.857 14.70 0.00 0.00 3.01
5966 10829 3.243177 GGATGCGACGTCTAATTCTGAAC 59.757 47.826 14.70 0.00 0.00 3.18
5967 10830 3.119280 TGGATGCGACGTCTAATTCTGAA 60.119 43.478 14.70 0.00 0.00 3.02
5968 10831 2.425668 TGGATGCGACGTCTAATTCTGA 59.574 45.455 14.70 0.00 0.00 3.27
5969 10832 2.809446 TGGATGCGACGTCTAATTCTG 58.191 47.619 14.70 0.00 0.00 3.02
5970 10833 3.384668 CATGGATGCGACGTCTAATTCT 58.615 45.455 14.70 0.00 0.00 2.40
5971 10834 2.476619 CCATGGATGCGACGTCTAATTC 59.523 50.000 14.70 6.35 0.00 2.17
5972 10835 2.483876 CCATGGATGCGACGTCTAATT 58.516 47.619 14.70 0.00 0.00 1.40
5973 10836 1.873903 GCCATGGATGCGACGTCTAAT 60.874 52.381 18.40 6.77 0.00 1.73
5974 10837 0.529773 GCCATGGATGCGACGTCTAA 60.530 55.000 18.40 1.34 0.00 2.10
5975 10838 1.067416 GCCATGGATGCGACGTCTA 59.933 57.895 18.40 2.69 0.00 2.59
5976 10839 2.202932 GCCATGGATGCGACGTCT 60.203 61.111 18.40 0.00 0.00 4.18
5977 10840 2.106074 TTGCCATGGATGCGACGTC 61.106 57.895 18.40 5.18 0.00 4.34
5978 10841 2.046411 TTGCCATGGATGCGACGT 60.046 55.556 18.40 0.00 0.00 4.34
5979 10842 1.921045 TTGTTGCCATGGATGCGACG 61.921 55.000 18.40 0.00 44.49 5.12
5980 10843 0.456653 GTTGTTGCCATGGATGCGAC 60.457 55.000 18.40 10.85 42.36 5.19
5981 10844 0.892814 TGTTGTTGCCATGGATGCGA 60.893 50.000 18.40 0.44 0.00 5.10
5982 10845 0.173935 ATGTTGTTGCCATGGATGCG 59.826 50.000 18.40 0.00 0.00 4.73
5983 10846 2.166050 TGTATGTTGTTGCCATGGATGC 59.834 45.455 18.40 4.31 0.00 3.91
5984 10847 3.444742 AGTGTATGTTGTTGCCATGGATG 59.555 43.478 18.40 0.00 0.00 3.51
5985 10848 3.444742 CAGTGTATGTTGTTGCCATGGAT 59.555 43.478 18.40 0.00 0.00 3.41
5986 10849 2.819019 CAGTGTATGTTGTTGCCATGGA 59.181 45.455 18.40 0.00 0.00 3.41
5987 10850 2.094597 CCAGTGTATGTTGTTGCCATGG 60.095 50.000 7.63 7.63 0.00 3.66
5988 10851 2.819019 TCCAGTGTATGTTGTTGCCATG 59.181 45.455 0.00 0.00 0.00 3.66
5989 10852 3.153369 TCCAGTGTATGTTGTTGCCAT 57.847 42.857 0.00 0.00 0.00 4.40
5990 10853 2.647683 TCCAGTGTATGTTGTTGCCA 57.352 45.000 0.00 0.00 0.00 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.