Multiple sequence alignment - TraesCS4B01G355900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G355900 chr4B 100.000 2714 0 0 1 2714 646820059 646817346 0.000000e+00 5012.0
1 TraesCS4B01G355900 chr4D 95.416 1309 42 10 538 1840 502426620 502425324 0.000000e+00 2069.0
2 TraesCS4B01G355900 chr4D 89.801 402 32 6 1917 2315 502425177 502424782 8.670000e-140 507.0
3 TraesCS4B01G355900 chr4D 90.157 254 18 1 2467 2713 502424768 502424515 9.370000e-85 324.0
4 TraesCS4B01G355900 chr5A 94.803 1270 53 11 565 1828 685581952 685580690 0.000000e+00 1967.0
5 TraesCS4B01G355900 chr5A 93.051 331 21 2 1973 2302 685579905 685579576 1.460000e-132 483.0
6 TraesCS4B01G355900 chr5A 87.259 259 33 0 5 263 584620256 584619998 2.040000e-76 296.0
7 TraesCS4B01G355900 chr5A 87.854 247 19 9 1880 2122 685580163 685579924 2.060000e-71 279.0
8 TraesCS4B01G355900 chr3D 86.071 280 37 2 2 280 295135850 295136128 1.580000e-77 300.0
9 TraesCS4B01G355900 chr3D 85.053 281 38 4 2 280 275910550 275910828 1.590000e-72 283.0
10 TraesCS4B01G355900 chr3A 86.182 275 38 0 6 280 136414240 136414514 5.680000e-77 298.0
11 TraesCS4B01G355900 chr7D 85.409 281 39 2 2 281 613912881 613912602 9.510000e-75 291.0
12 TraesCS4B01G355900 chr7D 95.745 94 4 0 2310 2403 385945478 385945385 4.680000e-33 152.0
13 TraesCS4B01G355900 chr7D 95.699 93 4 0 2313 2405 1261034 1260942 1.680000e-32 150.0
14 TraesCS4B01G355900 chr7D 94.737 95 5 0 2311 2405 34845555 34845649 6.050000e-32 148.0
15 TraesCS4B01G355900 chr6D 85.409 281 39 2 2 281 202940168 202940447 9.510000e-75 291.0
16 TraesCS4B01G355900 chr2D 85.507 276 39 1 5 280 373915996 373915722 1.230000e-73 287.0
17 TraesCS4B01G355900 chr3B 85.145 276 41 0 5 280 180448141 180448416 1.590000e-72 283.0
18 TraesCS4B01G355900 chr3B 90.090 111 5 4 2289 2398 243250304 243250409 3.640000e-29 139.0
19 TraesCS4B01G355900 chr5D 85.252 278 36 4 5 280 337152587 337152861 5.720000e-72 281.0
20 TraesCS4B01G355900 chr5B 93.396 106 6 1 2305 2410 680311255 680311359 3.620000e-34 156.0
21 TraesCS4B01G355900 chr7A 93.269 104 5 2 2313 2416 138960827 138960726 4.680000e-33 152.0
22 TraesCS4B01G355900 chr7A 95.699 93 4 0 2306 2398 690364556 690364464 1.680000e-32 150.0
23 TraesCS4B01G355900 chr2A 95.699 93 4 0 2306 2398 196345125 196345033 1.680000e-32 150.0
24 TraesCS4B01G355900 chrUn 90.826 109 7 3 2308 2416 230602173 230602068 2.820000e-30 143.0
25 TraesCS4B01G355900 chr1D 82.500 80 12 2 1307 1385 481466542 481466464 4.850000e-08 69.4
26 TraesCS4B01G355900 chr1D 89.796 49 3 2 1307 1354 481498625 481498672 8.110000e-06 62.1
27 TraesCS4B01G355900 chr1B 92.000 50 2 2 1307 1355 670034608 670034656 4.850000e-08 69.4
28 TraesCS4B01G355900 chr1B 80.645 93 14 4 1307 1397 670167353 670167263 4.850000e-08 69.4
29 TraesCS4B01G355900 chr1A 86.207 58 6 2 1307 1363 578196816 578196872 8.110000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G355900 chr4B 646817346 646820059 2713 True 5012.000000 5012 100.000000 1 2714 1 chr4B.!!$R1 2713
1 TraesCS4B01G355900 chr4D 502424515 502426620 2105 True 966.666667 2069 91.791333 538 2713 3 chr4D.!!$R1 2175
2 TraesCS4B01G355900 chr5A 685579576 685581952 2376 True 909.666667 1967 91.902667 565 2302 3 chr5A.!!$R2 1737

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
385 386 0.03467 AGGCTTGAGGCATCTCCAAC 60.035 55.0 7.34 0.0 44.01 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1716 1725 1.575419 AATTAGAGGTACCGCCACCA 58.425 50.0 12.54 0.0 41.4 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.780714 GCATGATCAGATGCTAAGCCT 58.219 47.619 13.00 0.00 44.57 4.58
21 22 3.935315 GCATGATCAGATGCTAAGCCTA 58.065 45.455 13.00 0.00 44.57 3.93
22 23 4.515361 GCATGATCAGATGCTAAGCCTAT 58.485 43.478 13.00 0.00 44.57 2.57
23 24 4.333095 GCATGATCAGATGCTAAGCCTATG 59.667 45.833 13.00 0.00 44.57 2.23
24 25 5.731591 CATGATCAGATGCTAAGCCTATGA 58.268 41.667 0.09 0.00 30.25 2.15
25 26 6.350103 CATGATCAGATGCTAAGCCTATGAT 58.650 40.000 0.09 0.00 37.70 2.45
26 27 6.370186 TGATCAGATGCTAAGCCTATGATT 57.630 37.500 0.00 0.00 35.85 2.57
27 28 6.171213 TGATCAGATGCTAAGCCTATGATTG 58.829 40.000 0.00 0.00 35.85 2.67
28 29 4.903054 TCAGATGCTAAGCCTATGATTGG 58.097 43.478 0.00 0.00 0.00 3.16
29 30 4.008330 CAGATGCTAAGCCTATGATTGGG 58.992 47.826 0.00 0.00 0.00 4.12
30 31 3.654806 AGATGCTAAGCCTATGATTGGGT 59.345 43.478 0.00 0.00 36.81 4.51
31 32 4.846367 AGATGCTAAGCCTATGATTGGGTA 59.154 41.667 0.00 0.00 34.56 3.69
32 33 5.490357 AGATGCTAAGCCTATGATTGGGTAT 59.510 40.000 0.00 0.00 34.56 2.73
33 34 4.910195 TGCTAAGCCTATGATTGGGTATG 58.090 43.478 0.00 0.00 34.56 2.39
34 35 4.350816 TGCTAAGCCTATGATTGGGTATGT 59.649 41.667 0.00 0.00 34.56 2.29
35 36 4.938226 GCTAAGCCTATGATTGGGTATGTC 59.062 45.833 0.00 0.00 34.56 3.06
36 37 4.373156 AAGCCTATGATTGGGTATGTCC 57.627 45.455 0.00 0.00 34.56 4.02
37 38 3.326521 AGCCTATGATTGGGTATGTCCA 58.673 45.455 0.00 0.00 38.11 4.02
38 39 3.918912 AGCCTATGATTGGGTATGTCCAT 59.081 43.478 0.00 0.00 36.58 3.41
39 40 4.018960 AGCCTATGATTGGGTATGTCCATC 60.019 45.833 0.00 0.00 36.58 3.51
40 41 4.263462 GCCTATGATTGGGTATGTCCATCA 60.263 45.833 0.00 0.00 36.58 3.07
41 42 5.574326 GCCTATGATTGGGTATGTCCATCAT 60.574 44.000 0.00 0.00 37.99 2.45
42 43 6.352996 GCCTATGATTGGGTATGTCCATCATA 60.353 42.308 0.00 0.00 36.89 2.15
43 44 7.638862 GCCTATGATTGGGTATGTCCATCATAT 60.639 40.741 14.16 0.00 40.54 1.78
44 45 7.935755 CCTATGATTGGGTATGTCCATCATATC 59.064 40.741 14.16 0.00 40.54 1.63
45 46 6.700845 TGATTGGGTATGTCCATCATATCA 57.299 37.500 0.00 0.00 40.75 2.15
46 47 6.475504 TGATTGGGTATGTCCATCATATCAC 58.524 40.000 0.00 0.00 40.75 3.06
47 48 6.273026 TGATTGGGTATGTCCATCATATCACT 59.727 38.462 0.00 0.00 40.75 3.41
48 49 5.745312 TGGGTATGTCCATCATATCACTC 57.255 43.478 0.00 0.00 40.75 3.51
49 50 5.406163 TGGGTATGTCCATCATATCACTCT 58.594 41.667 0.00 0.00 40.75 3.24
50 51 5.846164 TGGGTATGTCCATCATATCACTCTT 59.154 40.000 0.00 0.00 40.75 2.85
51 52 6.014242 TGGGTATGTCCATCATATCACTCTTC 60.014 42.308 0.00 0.00 40.75 2.87
52 53 6.212388 GGGTATGTCCATCATATCACTCTTCT 59.788 42.308 0.00 0.00 40.75 2.85
53 54 7.397476 GGGTATGTCCATCATATCACTCTTCTA 59.603 40.741 0.00 0.00 40.75 2.10
54 55 8.807118 GGTATGTCCATCATATCACTCTTCTAA 58.193 37.037 0.00 0.00 40.54 2.10
57 58 8.482852 TGTCCATCATATCACTCTTCTAATGA 57.517 34.615 0.00 0.00 0.00 2.57
58 59 9.097946 TGTCCATCATATCACTCTTCTAATGAT 57.902 33.333 0.00 0.00 35.11 2.45
59 60 9.368674 GTCCATCATATCACTCTTCTAATGATG 57.631 37.037 13.55 13.55 45.16 3.07
60 61 9.097946 TCCATCATATCACTCTTCTAATGATGT 57.902 33.333 17.23 0.00 44.57 3.06
61 62 9.152595 CCATCATATCACTCTTCTAATGATGTG 57.847 37.037 17.23 4.40 44.57 3.21
67 68 7.894753 TCACTCTTCTAATGATGTGATCTCT 57.105 36.000 0.00 0.00 30.78 3.10
68 69 8.303780 TCACTCTTCTAATGATGTGATCTCTT 57.696 34.615 0.00 0.00 30.78 2.85
69 70 8.756927 TCACTCTTCTAATGATGTGATCTCTTT 58.243 33.333 0.00 0.00 30.78 2.52
100 101 5.304686 ACAACTCATGTCTTTGGTTAGGA 57.695 39.130 0.00 0.00 37.96 2.94
101 102 5.690865 ACAACTCATGTCTTTGGTTAGGAA 58.309 37.500 0.00 0.00 37.96 3.36
102 103 6.126409 ACAACTCATGTCTTTGGTTAGGAAA 58.874 36.000 0.00 0.00 37.96 3.13
103 104 6.039382 ACAACTCATGTCTTTGGTTAGGAAAC 59.961 38.462 0.00 0.00 37.96 2.78
104 105 8.816925 ACAACTCATGTCTTTGGTTAGGAAACC 61.817 40.741 0.22 0.22 46.83 3.27
116 117 5.381174 GTTAGGAAACCTTAACCGCATTT 57.619 39.130 0.00 0.00 34.61 2.32
117 118 6.499234 GTTAGGAAACCTTAACCGCATTTA 57.501 37.500 0.00 0.00 34.61 1.40
118 119 6.912082 GTTAGGAAACCTTAACCGCATTTAA 58.088 36.000 0.00 0.00 34.61 1.52
119 120 5.638596 AGGAAACCTTAACCGCATTTAAG 57.361 39.130 6.97 6.97 38.36 1.85
120 121 5.318630 AGGAAACCTTAACCGCATTTAAGA 58.681 37.500 13.30 0.00 40.24 2.10
121 122 5.771165 AGGAAACCTTAACCGCATTTAAGAA 59.229 36.000 13.30 0.00 40.24 2.52
122 123 6.265876 AGGAAACCTTAACCGCATTTAAGAAA 59.734 34.615 13.30 0.00 40.24 2.52
123 124 6.364165 GGAAACCTTAACCGCATTTAAGAAAC 59.636 38.462 13.30 4.79 40.24 2.78
124 125 5.038247 ACCTTAACCGCATTTAAGAAACG 57.962 39.130 13.30 2.64 40.24 3.60
125 126 4.756135 ACCTTAACCGCATTTAAGAAACGA 59.244 37.500 13.30 0.00 40.24 3.85
126 127 5.106830 ACCTTAACCGCATTTAAGAAACGAG 60.107 40.000 13.30 1.83 40.24 4.18
127 128 2.894307 ACCGCATTTAAGAAACGAGC 57.106 45.000 0.00 0.00 0.00 5.03
128 129 2.423577 ACCGCATTTAAGAAACGAGCT 58.576 42.857 0.00 0.00 0.00 4.09
129 130 3.592059 ACCGCATTTAAGAAACGAGCTA 58.408 40.909 0.00 0.00 0.00 3.32
130 131 3.617263 ACCGCATTTAAGAAACGAGCTAG 59.383 43.478 0.00 0.00 0.00 3.42
131 132 3.617263 CCGCATTTAAGAAACGAGCTAGT 59.383 43.478 0.00 0.00 0.00 2.57
132 133 4.259850 CCGCATTTAAGAAACGAGCTAGTC 60.260 45.833 0.00 0.00 0.00 2.59
133 134 4.563184 CGCATTTAAGAAACGAGCTAGTCT 59.437 41.667 0.00 0.00 0.00 3.24
134 135 5.742453 CGCATTTAAGAAACGAGCTAGTCTA 59.258 40.000 0.00 0.00 0.00 2.59
135 136 6.075310 CGCATTTAAGAAACGAGCTAGTCTAG 60.075 42.308 0.00 2.18 0.00 2.43
136 137 6.752815 GCATTTAAGAAACGAGCTAGTCTAGT 59.247 38.462 8.68 0.00 31.68 2.57
137 138 7.914346 GCATTTAAGAAACGAGCTAGTCTAGTA 59.086 37.037 8.68 0.00 30.15 1.82
138 139 9.784680 CATTTAAGAAACGAGCTAGTCTAGTAA 57.215 33.333 8.68 0.00 30.15 2.24
140 141 9.837525 TTTAAGAAACGAGCTAGTCTAGTAAAG 57.162 33.333 8.68 1.49 30.15 1.85
141 142 7.684937 AAGAAACGAGCTAGTCTAGTAAAGA 57.315 36.000 8.68 0.00 30.15 2.52
153 154 5.979288 TCTAGTAAAGACTCACAAGGGAC 57.021 43.478 0.00 0.00 37.10 4.46
154 155 5.391256 TCTAGTAAAGACTCACAAGGGACA 58.609 41.667 0.00 0.00 37.10 4.02
155 156 4.338379 AGTAAAGACTCACAAGGGACAC 57.662 45.455 0.00 0.00 0.00 3.67
156 157 3.967987 AGTAAAGACTCACAAGGGACACT 59.032 43.478 0.00 0.00 0.00 3.55
157 158 2.918712 AAGACTCACAAGGGACACTG 57.081 50.000 0.00 0.00 0.00 3.66
158 159 1.794714 AGACTCACAAGGGACACTGT 58.205 50.000 0.00 0.00 0.00 3.55
159 160 1.414181 AGACTCACAAGGGACACTGTG 59.586 52.381 6.19 6.19 32.79 3.66
160 161 1.139058 GACTCACAAGGGACACTGTGT 59.861 52.381 14.23 14.23 33.10 3.72
161 162 1.559682 ACTCACAAGGGACACTGTGTT 59.440 47.619 15.54 0.00 33.10 3.32
162 163 2.026262 ACTCACAAGGGACACTGTGTTT 60.026 45.455 15.54 2.58 33.10 2.83
163 164 2.355756 CTCACAAGGGACACTGTGTTTG 59.644 50.000 15.54 16.85 33.10 2.93
164 165 2.091541 CACAAGGGACACTGTGTTTGT 58.908 47.619 18.74 18.74 31.28 2.83
165 166 2.491693 CACAAGGGACACTGTGTTTGTT 59.508 45.455 20.84 10.45 29.39 2.83
166 167 3.056891 CACAAGGGACACTGTGTTTGTTT 60.057 43.478 20.84 9.74 29.39 2.83
167 168 4.156922 CACAAGGGACACTGTGTTTGTTTA 59.843 41.667 20.84 0.00 29.39 2.01
168 169 4.953579 ACAAGGGACACTGTGTTTGTTTAT 59.046 37.500 18.74 2.57 27.86 1.40
169 170 5.163561 ACAAGGGACACTGTGTTTGTTTATG 60.164 40.000 18.74 12.63 27.86 1.90
170 171 4.532834 AGGGACACTGTGTTTGTTTATGT 58.467 39.130 15.54 0.00 0.00 2.29
171 172 5.686753 AGGGACACTGTGTTTGTTTATGTA 58.313 37.500 15.54 0.00 0.00 2.29
172 173 6.303839 AGGGACACTGTGTTTGTTTATGTAT 58.696 36.000 15.54 0.00 0.00 2.29
173 174 6.430000 AGGGACACTGTGTTTGTTTATGTATC 59.570 38.462 15.54 0.00 0.00 2.24
174 175 6.349033 GGGACACTGTGTTTGTTTATGTATCC 60.349 42.308 15.54 6.42 0.00 2.59
175 176 6.205853 GGACACTGTGTTTGTTTATGTATCCA 59.794 38.462 15.54 0.00 0.00 3.41
176 177 6.966021 ACACTGTGTTTGTTTATGTATCCAC 58.034 36.000 7.80 0.00 0.00 4.02
177 178 6.544197 ACACTGTGTTTGTTTATGTATCCACA 59.456 34.615 7.80 0.00 39.52 4.17
178 179 6.855914 CACTGTGTTTGTTTATGTATCCACAC 59.144 38.462 0.00 0.00 37.54 3.82
179 180 6.544197 ACTGTGTTTGTTTATGTATCCACACA 59.456 34.615 0.00 0.00 40.63 3.72
180 181 7.230510 ACTGTGTTTGTTTATGTATCCACACAT 59.769 33.333 2.50 0.00 41.67 3.21
181 182 7.366513 TGTGTTTGTTTATGTATCCACACATG 58.633 34.615 0.00 0.00 38.62 3.21
182 183 7.013750 TGTGTTTGTTTATGTATCCACACATGT 59.986 33.333 0.00 0.00 38.62 3.21
183 184 8.508062 GTGTTTGTTTATGTATCCACACATGTA 58.492 33.333 0.00 0.00 39.46 2.29
184 185 9.237187 TGTTTGTTTATGTATCCACACATGTAT 57.763 29.630 0.00 0.00 39.46 2.29
188 189 9.454859 TGTTTATGTATCCACACATGTATTTGA 57.545 29.630 0.00 0.00 39.46 2.69
189 190 9.935682 GTTTATGTATCCACACATGTATTTGAG 57.064 33.333 0.00 0.00 39.46 3.02
190 191 9.679661 TTTATGTATCCACACATGTATTTGAGT 57.320 29.630 0.00 0.00 39.46 3.41
191 192 7.792374 ATGTATCCACACATGTATTTGAGTC 57.208 36.000 0.00 0.00 37.74 3.36
192 193 6.946340 TGTATCCACACATGTATTTGAGTCT 58.054 36.000 0.00 0.00 0.00 3.24
193 194 6.818142 TGTATCCACACATGTATTTGAGTCTG 59.182 38.462 0.00 0.00 0.00 3.51
194 195 5.227569 TCCACACATGTATTTGAGTCTGT 57.772 39.130 0.00 0.00 0.00 3.41
195 196 5.620206 TCCACACATGTATTTGAGTCTGTT 58.380 37.500 0.00 0.00 0.00 3.16
196 197 6.764379 TCCACACATGTATTTGAGTCTGTTA 58.236 36.000 0.00 0.00 0.00 2.41
197 198 7.394016 TCCACACATGTATTTGAGTCTGTTAT 58.606 34.615 0.00 0.00 0.00 1.89
198 199 7.882791 TCCACACATGTATTTGAGTCTGTTATT 59.117 33.333 0.00 0.00 0.00 1.40
199 200 9.161629 CCACACATGTATTTGAGTCTGTTATTA 57.838 33.333 0.00 0.00 0.00 0.98
236 237 9.793259 ACCTTGAAGAATAAACACTTATCAAGA 57.207 29.630 12.36 0.00 32.49 3.02
243 244 9.793259 AGAATAAACACTTATCAAGAACAAGGA 57.207 29.630 0.00 0.00 0.00 3.36
250 251 8.462016 ACACTTATCAAGAACAAGGAAATATGC 58.538 33.333 0.00 0.00 0.00 3.14
251 252 8.680903 CACTTATCAAGAACAAGGAAATATGCT 58.319 33.333 0.00 0.00 0.00 3.79
252 253 9.905713 ACTTATCAAGAACAAGGAAATATGCTA 57.094 29.630 0.00 0.00 0.00 3.49
282 283 9.320295 ACAAATTAATTATTTTCTCCAGGGTCA 57.680 29.630 0.01 0.00 34.19 4.02
286 287 9.713684 ATTAATTATTTTCTCCAGGGTCAATCA 57.286 29.630 0.00 0.00 0.00 2.57
287 288 9.713684 TTAATTATTTTCTCCAGGGTCAATCAT 57.286 29.630 0.00 0.00 0.00 2.45
288 289 7.592885 ATTATTTTCTCCAGGGTCAATCATG 57.407 36.000 0.00 0.00 0.00 3.07
289 290 4.656100 TTTTCTCCAGGGTCAATCATGA 57.344 40.909 0.00 0.00 0.00 3.07
290 291 4.656100 TTTCTCCAGGGTCAATCATGAA 57.344 40.909 0.00 0.00 37.30 2.57
291 292 4.656100 TTCTCCAGGGTCAATCATGAAA 57.344 40.909 0.00 0.00 37.30 2.69
292 293 4.656100 TCTCCAGGGTCAATCATGAAAA 57.344 40.909 0.00 0.00 37.30 2.29
293 294 4.335416 TCTCCAGGGTCAATCATGAAAAC 58.665 43.478 0.00 0.00 37.30 2.43
294 295 4.043310 TCTCCAGGGTCAATCATGAAAACT 59.957 41.667 0.00 0.00 37.30 2.66
295 296 5.250543 TCTCCAGGGTCAATCATGAAAACTA 59.749 40.000 0.00 0.00 37.30 2.24
296 297 5.886609 TCCAGGGTCAATCATGAAAACTAA 58.113 37.500 0.00 0.00 37.30 2.24
297 298 5.945784 TCCAGGGTCAATCATGAAAACTAAG 59.054 40.000 0.00 0.00 37.30 2.18
298 299 5.945784 CCAGGGTCAATCATGAAAACTAAGA 59.054 40.000 0.00 0.00 37.30 2.10
299 300 6.604795 CCAGGGTCAATCATGAAAACTAAGAT 59.395 38.462 0.00 0.00 37.30 2.40
300 301 7.775093 CCAGGGTCAATCATGAAAACTAAGATA 59.225 37.037 0.00 0.00 37.30 1.98
301 302 9.347240 CAGGGTCAATCATGAAAACTAAGATAT 57.653 33.333 0.00 0.00 37.30 1.63
302 303 9.347240 AGGGTCAATCATGAAAACTAAGATATG 57.653 33.333 0.00 0.00 37.30 1.78
303 304 9.125026 GGGTCAATCATGAAAACTAAGATATGT 57.875 33.333 0.00 0.00 37.30 2.29
335 336 7.426929 AAAAACTCAGATATGTGTGACTCAC 57.573 36.000 8.73 1.86 46.31 3.51
336 337 5.991933 AACTCAGATATGTGTGACTCACT 57.008 39.130 10.54 0.00 46.27 3.41
337 338 5.991933 ACTCAGATATGTGTGACTCACTT 57.008 39.130 10.54 5.43 46.27 3.16
338 339 6.352016 ACTCAGATATGTGTGACTCACTTT 57.648 37.500 10.54 0.00 46.27 2.66
339 340 6.763355 ACTCAGATATGTGTGACTCACTTTT 58.237 36.000 10.54 0.00 46.27 2.27
340 341 6.648310 ACTCAGATATGTGTGACTCACTTTTG 59.352 38.462 10.54 3.73 46.27 2.44
341 342 5.409520 TCAGATATGTGTGACTCACTTTTGC 59.590 40.000 10.54 0.00 46.27 3.68
342 343 5.179929 CAGATATGTGTGACTCACTTTTGCA 59.820 40.000 10.54 0.00 46.27 4.08
343 344 5.764686 AGATATGTGTGACTCACTTTTGCAA 59.235 36.000 10.54 0.00 46.27 4.08
344 345 3.763097 TGTGTGACTCACTTTTGCAAG 57.237 42.857 10.54 0.00 46.27 4.01
345 346 3.342719 TGTGTGACTCACTTTTGCAAGA 58.657 40.909 10.54 0.00 46.27 3.02
346 347 3.374988 TGTGTGACTCACTTTTGCAAGAG 59.625 43.478 15.05 15.05 46.27 2.85
347 348 2.945008 TGTGACTCACTTTTGCAAGAGG 59.055 45.455 20.04 9.85 35.11 3.69
348 349 3.206150 GTGACTCACTTTTGCAAGAGGA 58.794 45.455 20.04 13.11 33.72 3.71
349 350 3.817647 GTGACTCACTTTTGCAAGAGGAT 59.182 43.478 20.04 3.51 33.72 3.24
350 351 3.817084 TGACTCACTTTTGCAAGAGGATG 59.183 43.478 20.04 10.84 33.72 3.51
351 352 3.817647 GACTCACTTTTGCAAGAGGATGT 59.182 43.478 20.04 14.21 33.72 3.06
352 353 4.973168 ACTCACTTTTGCAAGAGGATGTA 58.027 39.130 20.04 1.42 33.72 2.29
353 354 5.564550 ACTCACTTTTGCAAGAGGATGTAT 58.435 37.500 20.04 0.00 33.72 2.29
354 355 6.711277 ACTCACTTTTGCAAGAGGATGTATA 58.289 36.000 20.04 0.00 33.72 1.47
355 356 7.341805 ACTCACTTTTGCAAGAGGATGTATAT 58.658 34.615 20.04 0.00 33.72 0.86
356 357 8.486210 ACTCACTTTTGCAAGAGGATGTATATA 58.514 33.333 20.04 0.00 33.72 0.86
357 358 9.499479 CTCACTTTTGCAAGAGGATGTATATAT 57.501 33.333 20.04 0.00 33.72 0.86
358 359 9.494271 TCACTTTTGCAAGAGGATGTATATATC 57.506 33.333 20.04 0.97 33.72 1.63
359 360 9.499479 CACTTTTGCAAGAGGATGTATATATCT 57.501 33.333 20.04 0.00 33.72 1.98
362 363 9.658799 TTTTGCAAGAGGATGTATATATCTAGC 57.341 33.333 9.09 7.12 0.00 3.42
363 364 8.601047 TTGCAAGAGGATGTATATATCTAGCT 57.399 34.615 9.09 0.00 0.00 3.32
364 365 8.601047 TGCAAGAGGATGTATATATCTAGCTT 57.399 34.615 9.09 7.49 0.00 3.74
365 366 8.473219 TGCAAGAGGATGTATATATCTAGCTTG 58.527 37.037 20.98 20.98 35.34 4.01
366 367 8.690884 GCAAGAGGATGTATATATCTAGCTTGA 58.309 37.037 24.99 0.00 34.85 3.02
368 369 8.995027 AGAGGATGTATATATCTAGCTTGAGG 57.005 38.462 9.09 0.00 0.00 3.86
369 370 7.505585 AGAGGATGTATATATCTAGCTTGAGGC 59.494 40.741 9.09 0.00 42.19 4.70
378 379 4.333417 GCTTGAGGCTTGAGGCAT 57.667 55.556 7.34 0.00 44.01 4.40
382 383 4.874528 GAGGCTTGAGGCATCTCC 57.125 61.111 7.34 0.00 46.73 3.71
383 384 1.910722 GAGGCTTGAGGCATCTCCA 59.089 57.895 7.34 0.00 46.73 3.86
384 385 0.254178 GAGGCTTGAGGCATCTCCAA 59.746 55.000 7.34 0.00 46.73 3.53
385 386 0.034670 AGGCTTGAGGCATCTCCAAC 60.035 55.000 7.34 0.00 44.01 3.77
386 387 0.322816 GGCTTGAGGCATCTCCAACA 60.323 55.000 0.00 0.00 44.01 3.33
387 388 0.807496 GCTTGAGGCATCTCCAACAC 59.193 55.000 0.00 0.00 39.23 3.32
388 389 1.883638 GCTTGAGGCATCTCCAACACA 60.884 52.381 0.00 0.00 39.23 3.72
389 390 2.507484 CTTGAGGCATCTCCAACACAA 58.493 47.619 0.00 0.00 39.23 3.33
390 391 2.189594 TGAGGCATCTCCAACACAAG 57.810 50.000 0.00 0.00 39.23 3.16
391 392 0.807496 GAGGCATCTCCAACACAAGC 59.193 55.000 0.00 0.00 37.29 4.01
392 393 0.610232 AGGCATCTCCAACACAAGCC 60.610 55.000 0.00 0.00 40.85 4.35
393 394 1.598701 GGCATCTCCAACACAAGCCC 61.599 60.000 0.00 0.00 34.71 5.19
394 395 0.610232 GCATCTCCAACACAAGCCCT 60.610 55.000 0.00 0.00 0.00 5.19
395 396 1.915141 CATCTCCAACACAAGCCCTT 58.085 50.000 0.00 0.00 0.00 3.95
396 397 2.879756 GCATCTCCAACACAAGCCCTTA 60.880 50.000 0.00 0.00 0.00 2.69
397 398 3.420893 CATCTCCAACACAAGCCCTTAA 58.579 45.455 0.00 0.00 0.00 1.85
398 399 3.586470 TCTCCAACACAAGCCCTTAAA 57.414 42.857 0.00 0.00 0.00 1.52
399 400 3.904717 TCTCCAACACAAGCCCTTAAAA 58.095 40.909 0.00 0.00 0.00 1.52
400 401 3.634910 TCTCCAACACAAGCCCTTAAAAC 59.365 43.478 0.00 0.00 0.00 2.43
401 402 2.359531 TCCAACACAAGCCCTTAAAACG 59.640 45.455 0.00 0.00 0.00 3.60
402 403 2.544903 CCAACACAAGCCCTTAAAACGG 60.545 50.000 0.00 0.00 0.00 4.44
403 404 2.351706 ACACAAGCCCTTAAAACGGA 57.648 45.000 0.00 0.00 0.00 4.69
404 405 1.951602 ACACAAGCCCTTAAAACGGAC 59.048 47.619 0.00 0.00 0.00 4.79
405 406 1.950909 CACAAGCCCTTAAAACGGACA 59.049 47.619 0.00 0.00 0.00 4.02
406 407 2.359531 CACAAGCCCTTAAAACGGACAA 59.640 45.455 0.00 0.00 0.00 3.18
407 408 2.621526 ACAAGCCCTTAAAACGGACAAG 59.378 45.455 0.00 0.00 0.00 3.16
408 409 1.905637 AGCCCTTAAAACGGACAAGG 58.094 50.000 0.00 0.00 38.86 3.61
409 410 0.242825 GCCCTTAAAACGGACAAGGC 59.757 55.000 0.00 0.00 37.99 4.35
410 411 1.611519 CCCTTAAAACGGACAAGGCA 58.388 50.000 0.00 0.00 37.99 4.75
411 412 1.957877 CCCTTAAAACGGACAAGGCAA 59.042 47.619 0.00 0.00 37.99 4.52
412 413 2.362717 CCCTTAAAACGGACAAGGCAAA 59.637 45.455 0.00 0.00 37.99 3.68
413 414 3.006430 CCCTTAAAACGGACAAGGCAAAT 59.994 43.478 0.00 0.00 37.99 2.32
414 415 4.218852 CCCTTAAAACGGACAAGGCAAATA 59.781 41.667 0.00 0.00 37.99 1.40
415 416 5.105513 CCCTTAAAACGGACAAGGCAAATAT 60.106 40.000 0.00 0.00 37.99 1.28
416 417 6.394809 CCTTAAAACGGACAAGGCAAATATT 58.605 36.000 0.00 0.00 32.94 1.28
417 418 6.310224 CCTTAAAACGGACAAGGCAAATATTG 59.690 38.462 0.00 0.00 32.94 1.90
418 419 3.866883 AACGGACAAGGCAAATATTGG 57.133 42.857 0.00 0.00 0.00 3.16
419 420 2.802719 ACGGACAAGGCAAATATTGGT 58.197 42.857 0.00 0.00 0.00 3.67
420 421 2.752903 ACGGACAAGGCAAATATTGGTC 59.247 45.455 0.00 0.00 0.00 4.02
421 422 2.223249 CGGACAAGGCAAATATTGGTCG 60.223 50.000 0.00 0.00 0.00 4.79
422 423 3.013921 GGACAAGGCAAATATTGGTCGA 58.986 45.455 0.00 0.00 0.00 4.20
423 424 3.181500 GGACAAGGCAAATATTGGTCGAC 60.181 47.826 7.13 7.13 0.00 4.20
424 425 3.417101 ACAAGGCAAATATTGGTCGACA 58.583 40.909 18.91 0.00 0.00 4.35
425 426 4.016444 ACAAGGCAAATATTGGTCGACAT 58.984 39.130 18.91 5.72 0.00 3.06
426 427 4.142403 ACAAGGCAAATATTGGTCGACATG 60.142 41.667 18.91 5.36 0.00 3.21
427 428 3.620488 AGGCAAATATTGGTCGACATGT 58.380 40.909 18.91 0.00 0.00 3.21
428 429 3.627577 AGGCAAATATTGGTCGACATGTC 59.372 43.478 18.91 16.21 0.00 3.06
429 430 3.243068 GGCAAATATTGGTCGACATGTCC 60.243 47.826 20.03 7.69 0.00 4.02
430 431 3.546020 GCAAATATTGGTCGACATGTCCG 60.546 47.826 20.03 14.58 0.00 4.79
431 432 2.526304 ATATTGGTCGACATGTCCGG 57.474 50.000 20.03 7.32 0.00 5.14
432 433 0.462375 TATTGGTCGACATGTCCGGG 59.538 55.000 20.03 6.58 0.00 5.73
433 434 1.261938 ATTGGTCGACATGTCCGGGA 61.262 55.000 20.03 8.94 0.00 5.14
434 435 1.261938 TTGGTCGACATGTCCGGGAT 61.262 55.000 20.03 0.00 0.00 3.85
435 436 1.227263 GGTCGACATGTCCGGGATG 60.227 63.158 20.03 7.25 0.00 3.51
436 437 1.515954 GTCGACATGTCCGGGATGT 59.484 57.895 20.03 17.06 36.73 3.06
437 438 0.108329 GTCGACATGTCCGGGATGTT 60.108 55.000 20.03 5.65 34.10 2.71
438 439 0.174845 TCGACATGTCCGGGATGTTC 59.825 55.000 20.03 11.61 34.10 3.18
439 440 0.810031 CGACATGTCCGGGATGTTCC 60.810 60.000 20.03 8.21 34.10 3.62
446 447 3.864686 CGGGATGTTCCGCGCAAG 61.865 66.667 8.75 0.00 43.71 4.01
447 448 2.435938 GGGATGTTCCGCGCAAGA 60.436 61.111 8.75 0.00 37.43 3.02
448 449 1.819632 GGGATGTTCCGCGCAAGAT 60.820 57.895 8.75 0.00 37.43 2.40
449 450 0.531974 GGGATGTTCCGCGCAAGATA 60.532 55.000 8.75 0.00 37.43 1.98
450 451 0.861837 GGATGTTCCGCGCAAGATAG 59.138 55.000 8.75 0.00 43.02 2.08
451 452 0.861837 GATGTTCCGCGCAAGATAGG 59.138 55.000 8.75 0.00 43.02 2.57
452 453 0.532862 ATGTTCCGCGCAAGATAGGG 60.533 55.000 8.75 0.00 43.02 3.53
453 454 1.887707 GTTCCGCGCAAGATAGGGG 60.888 63.158 8.75 0.00 41.23 4.79
454 455 2.061578 TTCCGCGCAAGATAGGGGA 61.062 57.895 8.75 0.00 45.85 4.81
455 456 2.029666 CCGCGCAAGATAGGGGAG 59.970 66.667 8.75 0.00 42.30 4.30
456 457 2.029666 CGCGCAAGATAGGGGAGG 59.970 66.667 8.75 0.00 43.02 4.30
457 458 2.498941 CGCGCAAGATAGGGGAGGA 61.499 63.158 8.75 0.00 43.02 3.71
458 459 1.830145 GCGCAAGATAGGGGAGGAA 59.170 57.895 0.30 0.00 43.02 3.36
459 460 0.250081 GCGCAAGATAGGGGAGGAAG 60.250 60.000 0.30 0.00 43.02 3.46
460 461 0.250081 CGCAAGATAGGGGAGGAAGC 60.250 60.000 0.00 0.00 43.02 3.86
461 462 0.109532 GCAAGATAGGGGAGGAAGCC 59.890 60.000 0.00 0.00 0.00 4.35
462 463 1.813102 CAAGATAGGGGAGGAAGCCT 58.187 55.000 0.00 0.00 36.03 4.58
474 475 3.017442 GAGGAAGCCTCCAATGTTAACC 58.983 50.000 3.68 0.00 44.36 2.85
475 476 2.649816 AGGAAGCCTCCAATGTTAACCT 59.350 45.455 3.68 0.00 45.24 3.50
476 477 2.755103 GGAAGCCTCCAATGTTAACCTG 59.245 50.000 2.48 0.50 41.96 4.00
477 478 1.839424 AGCCTCCAATGTTAACCTGC 58.161 50.000 2.48 0.00 0.00 4.85
478 479 1.075374 AGCCTCCAATGTTAACCTGCA 59.925 47.619 2.48 0.00 0.00 4.41
479 480 2.102578 GCCTCCAATGTTAACCTGCAT 58.897 47.619 2.48 0.00 0.00 3.96
480 481 2.497273 GCCTCCAATGTTAACCTGCATT 59.503 45.455 2.48 0.00 35.91 3.56
481 482 3.055891 GCCTCCAATGTTAACCTGCATTT 60.056 43.478 2.48 0.00 33.55 2.32
482 483 4.497300 CCTCCAATGTTAACCTGCATTTG 58.503 43.478 2.48 0.00 33.55 2.32
483 484 4.021192 CCTCCAATGTTAACCTGCATTTGT 60.021 41.667 2.48 0.00 33.55 2.83
484 485 5.132897 TCCAATGTTAACCTGCATTTGTC 57.867 39.130 2.48 0.00 33.55 3.18
485 486 4.021544 TCCAATGTTAACCTGCATTTGTCC 60.022 41.667 2.48 0.00 33.55 4.02
486 487 3.848272 ATGTTAACCTGCATTTGTCCG 57.152 42.857 2.48 0.00 0.00 4.79
487 488 2.577700 TGTTAACCTGCATTTGTCCGT 58.422 42.857 2.48 0.00 0.00 4.69
488 489 3.741249 TGTTAACCTGCATTTGTCCGTA 58.259 40.909 2.48 0.00 0.00 4.02
489 490 3.749088 TGTTAACCTGCATTTGTCCGTAG 59.251 43.478 2.48 0.00 0.00 3.51
490 491 2.561478 AACCTGCATTTGTCCGTAGT 57.439 45.000 0.00 0.00 0.00 2.73
491 492 1.808411 ACCTGCATTTGTCCGTAGTG 58.192 50.000 0.00 0.00 0.00 2.74
492 493 0.447801 CCTGCATTTGTCCGTAGTGC 59.552 55.000 0.00 0.00 36.39 4.40
493 494 1.155889 CTGCATTTGTCCGTAGTGCA 58.844 50.000 0.00 0.00 42.86 4.57
494 495 1.739466 CTGCATTTGTCCGTAGTGCAT 59.261 47.619 0.00 0.00 43.89 3.96
495 496 1.468127 TGCATTTGTCCGTAGTGCATG 59.532 47.619 0.00 0.00 40.51 4.06
496 497 1.468520 GCATTTGTCCGTAGTGCATGT 59.531 47.619 0.00 0.00 35.93 3.21
497 498 2.728846 GCATTTGTCCGTAGTGCATGTG 60.729 50.000 0.00 0.00 35.93 3.21
498 499 2.535012 TTTGTCCGTAGTGCATGTGA 57.465 45.000 0.00 0.00 0.00 3.58
499 500 2.078849 TTGTCCGTAGTGCATGTGAG 57.921 50.000 0.00 0.00 0.00 3.51
500 501 0.246360 TGTCCGTAGTGCATGTGAGG 59.754 55.000 0.00 0.00 0.00 3.86
501 502 0.460284 GTCCGTAGTGCATGTGAGGG 60.460 60.000 0.00 0.00 0.00 4.30
502 503 1.815421 CCGTAGTGCATGTGAGGGC 60.815 63.158 0.00 0.00 0.00 5.19
503 504 1.079197 CGTAGTGCATGTGAGGGCA 60.079 57.895 0.00 0.00 37.77 5.36
504 505 1.086067 CGTAGTGCATGTGAGGGCAG 61.086 60.000 0.00 0.00 41.35 4.85
505 506 0.036010 GTAGTGCATGTGAGGGCAGT 60.036 55.000 0.00 0.00 45.15 4.40
506 507 0.036105 TAGTGCATGTGAGGGCAGTG 60.036 55.000 4.35 0.00 43.17 3.66
507 508 1.601759 GTGCATGTGAGGGCAGTGT 60.602 57.895 0.00 0.00 41.35 3.55
508 509 1.151221 TGCATGTGAGGGCAGTGTT 59.849 52.632 0.00 0.00 34.58 3.32
509 510 0.467844 TGCATGTGAGGGCAGTGTTT 60.468 50.000 0.00 0.00 34.58 2.83
510 511 0.675633 GCATGTGAGGGCAGTGTTTT 59.324 50.000 0.00 0.00 0.00 2.43
511 512 1.069049 GCATGTGAGGGCAGTGTTTTT 59.931 47.619 0.00 0.00 0.00 1.94
541 542 6.761242 TCCTGATACATAGTCGATTTTGGTTG 59.239 38.462 3.63 0.00 0.00 3.77
547 548 2.084546 AGTCGATTTTGGTTGGCTAGC 58.915 47.619 6.04 6.04 0.00 3.42
556 557 1.220749 GTTGGCTAGCCGGATGTCA 59.779 57.895 28.28 6.43 39.42 3.58
557 558 0.179045 GTTGGCTAGCCGGATGTCAT 60.179 55.000 28.28 0.00 39.42 3.06
581 585 0.854705 GCAAAGCCTTCAAGTTTGCG 59.145 50.000 9.11 0.00 44.65 4.85
591 595 3.624326 TCAAGTTTGCGATCACTTTGG 57.376 42.857 0.00 0.00 30.48 3.28
603 607 2.248835 ACTTTGGCGGTTCGAACGG 61.249 57.895 26.33 26.33 0.00 4.44
636 641 1.480954 ACGAACGGTTGAGGATAGCAT 59.519 47.619 0.00 0.00 0.00 3.79
647 652 6.460676 GGTTGAGGATAGCATTCAATTGGAAG 60.461 42.308 5.42 0.00 39.30 3.46
648 653 6.005066 TGAGGATAGCATTCAATTGGAAGA 57.995 37.500 5.42 0.00 39.30 2.87
649 654 6.060136 TGAGGATAGCATTCAATTGGAAGAG 58.940 40.000 5.42 0.00 39.30 2.85
651 656 6.666678 AGGATAGCATTCAATTGGAAGAGAA 58.333 36.000 5.42 0.00 39.30 2.87
652 657 7.121382 AGGATAGCATTCAATTGGAAGAGAAA 58.879 34.615 5.42 0.00 39.30 2.52
653 658 7.284944 AGGATAGCATTCAATTGGAAGAGAAAG 59.715 37.037 5.42 0.00 39.30 2.62
673 678 4.993029 AGAAAATGTCTAGACTCCCGAG 57.007 45.455 23.01 0.00 33.56 4.63
678 683 5.740290 AATGTCTAGACTCCCGAGAAAAA 57.260 39.130 23.01 0.00 0.00 1.94
842 847 0.685660 GCCTACCTACCTACCATGGC 59.314 60.000 13.04 0.00 0.00 4.40
889 895 1.528161 CGTCCAACGTTTTAGACCACC 59.472 52.381 14.14 0.00 36.74 4.61
941 947 2.486636 CTTCGCTCACGGCCACACTA 62.487 60.000 2.24 0.00 40.63 2.74
956 962 5.798934 GGCCACACTAGTTTATATATCGACG 59.201 44.000 0.00 0.00 0.00 5.12
992 998 1.374758 CAACTCGCTCCACTCACCC 60.375 63.158 0.00 0.00 0.00 4.61
1169 1178 4.148825 CCTCGAGACCAAGGCCCG 62.149 72.222 15.71 0.00 0.00 6.13
1599 1608 2.113986 GGGGACTGCAAGCTGTGT 59.886 61.111 9.35 0.00 37.60 3.72
1615 1624 0.750850 GTGTCTAGAGGCCGCCATTA 59.249 55.000 13.15 2.42 0.00 1.90
1629 1638 1.312815 CCATTAGTAAGCTGCTGGCC 58.687 55.000 1.35 0.00 43.05 5.36
1716 1725 7.125391 TGTATCCCATTTTTGATTCCTAGCTT 58.875 34.615 0.00 0.00 0.00 3.74
1730 1739 1.610554 TAGCTTGGTGGCGGTACCTC 61.611 60.000 10.90 0.69 41.43 3.85
1831 1840 9.778741 TTCAGATACAAGAAACTTCAGTTATGT 57.221 29.630 9.39 9.39 37.25 2.29
1832 1841 9.778741 TCAGATACAAGAAACTTCAGTTATGTT 57.221 29.630 9.61 0.00 37.25 2.71
1846 2320 9.626045 CTTCAGTTATGTTTGTAAATCCCTTTC 57.374 33.333 0.00 0.00 0.00 2.62
1863 2337 4.746611 CCCTTTCACATTCTTTGCTTTCAC 59.253 41.667 0.00 0.00 0.00 3.18
1865 2339 4.630894 TTCACATTCTTTGCTTTCACGT 57.369 36.364 0.00 0.00 0.00 4.49
1874 2348 1.960417 TGCTTTCACGTGATTGGTCA 58.040 45.000 20.80 10.32 0.00 4.02
1884 2384 5.861251 TCACGTGATTGGTCATTAAAATTGC 59.139 36.000 15.76 0.00 36.60 3.56
1890 2390 1.926510 GGTCATTAAAATTGCCGCTGC 59.073 47.619 0.00 0.00 38.26 5.25
1906 2406 5.048643 TGCCGCTGCTTTAATACAACTTTAA 60.049 36.000 0.70 0.00 38.71 1.52
1909 2409 7.376072 GCCGCTGCTTTAATACAACTTTAATAG 59.624 37.037 0.00 0.00 33.53 1.73
1910 2410 8.395633 CCGCTGCTTTAATACAACTTTAATAGT 58.604 33.333 0.00 0.00 39.32 2.12
1931 2431 1.770061 ACTCGGGAGGGAGTAGTAGAG 59.230 57.143 0.00 0.00 45.14 2.43
2033 2706 5.105752 CCTTTGTTCAACGGTTGATTGAAA 58.894 37.500 22.97 18.49 45.19 2.69
2076 2749 5.479027 TGTAAGGTAGAGTACATCTTGTGCA 59.521 40.000 0.00 0.00 39.64 4.57
2096 2769 4.023536 TGCAAACCCTCGAACAATTCTAAC 60.024 41.667 0.00 0.00 0.00 2.34
2186 2860 7.379529 GTGGTGAACATACTTTGAACAATTCAG 59.620 37.037 0.00 0.00 41.38 3.02
2307 2982 1.117994 CTACCCCTCCGTTCCCTAAC 58.882 60.000 0.00 0.00 0.00 2.34
2312 2987 2.709397 CCCCTCCGTTCCCTAACATAAT 59.291 50.000 0.00 0.00 35.16 1.28
2315 2990 4.591924 CCCTCCGTTCCCTAACATAATACT 59.408 45.833 0.00 0.00 35.16 2.12
2316 2991 5.279356 CCCTCCGTTCCCTAACATAATACTC 60.279 48.000 0.00 0.00 35.16 2.59
2318 2993 6.294620 CCTCCGTTCCCTAACATAATACTCTC 60.295 46.154 0.00 0.00 35.16 3.20
2319 2994 6.371278 TCCGTTCCCTAACATAATACTCTCT 58.629 40.000 0.00 0.00 35.16 3.10
2320 2995 6.489361 TCCGTTCCCTAACATAATACTCTCTC 59.511 42.308 0.00 0.00 35.16 3.20
2321 2996 6.490721 CCGTTCCCTAACATAATACTCTCTCT 59.509 42.308 0.00 0.00 35.16 3.10
2322 2997 7.364200 CGTTCCCTAACATAATACTCTCTCTG 58.636 42.308 0.00 0.00 35.16 3.35
2324 2999 9.352191 GTTCCCTAACATAATACTCTCTCTGTA 57.648 37.037 0.00 0.00 35.56 2.74
2325 3000 9.931698 TTCCCTAACATAATACTCTCTCTGTAA 57.068 33.333 0.00 0.00 0.00 2.41
2326 3001 9.931698 TCCCTAACATAATACTCTCTCTGTAAA 57.068 33.333 0.00 0.00 0.00 2.01
2391 3066 9.813446 AAACACTCTTATATTAGTTTACGGAGG 57.187 33.333 0.00 0.00 0.00 4.30
2392 3067 7.949434 ACACTCTTATATTAGTTTACGGAGGG 58.051 38.462 0.00 0.00 0.00 4.30
2393 3068 7.781693 ACACTCTTATATTAGTTTACGGAGGGA 59.218 37.037 0.00 0.00 0.00 4.20
2394 3069 8.298140 CACTCTTATATTAGTTTACGGAGGGAG 58.702 40.741 0.00 0.00 0.00 4.30
2395 3070 8.003629 ACTCTTATATTAGTTTACGGAGGGAGT 58.996 37.037 0.00 0.00 0.00 3.85
2396 3071 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
2397 3072 9.289782 TCTTATATTAGTTTACGGAGGGAGTAC 57.710 37.037 0.00 0.00 0.00 2.73
2398 3073 6.907853 ATATTAGTTTACGGAGGGAGTACC 57.092 41.667 0.00 0.00 40.67 3.34
2422 3097 9.705290 ACCTTTTATGTTTTTCTTAATTCGCAT 57.295 25.926 0.00 0.00 0.00 4.73
2423 3098 9.956797 CCTTTTATGTTTTTCTTAATTCGCATG 57.043 29.630 0.00 0.00 0.00 4.06
2433 3108 9.594478 TTTTCTTAATTCGCATGTATCTAGACA 57.406 29.630 0.00 0.00 0.00 3.41
2434 3109 8.575565 TTCTTAATTCGCATGTATCTAGACAC 57.424 34.615 0.00 0.00 30.52 3.67
2435 3110 7.712797 TCTTAATTCGCATGTATCTAGACACA 58.287 34.615 6.26 6.26 30.52 3.72
2436 3111 8.360390 TCTTAATTCGCATGTATCTAGACACAT 58.640 33.333 10.93 10.93 35.79 3.21
2437 3112 9.626045 CTTAATTCGCATGTATCTAGACACATA 57.374 33.333 16.09 1.66 33.66 2.29
2441 3116 9.794685 ATTCGCATGTATCTAGACACATATTAG 57.205 33.333 16.09 5.68 33.66 1.73
2442 3117 8.336801 TCGCATGTATCTAGACACATATTAGT 57.663 34.615 16.09 0.00 33.66 2.24
2443 3118 9.444600 TCGCATGTATCTAGACACATATTAGTA 57.555 33.333 16.09 0.00 33.66 1.82
2531 3206 5.880054 AGAACGGATGGAGTAACAAATTG 57.120 39.130 0.00 0.00 0.00 2.32
2541 3216 7.595819 TGGAGTAACAAATTGATTGGTTTCT 57.404 32.000 0.00 2.91 43.66 2.52
2617 3292 1.268352 GTGGCACGCATAAAAGGTTCA 59.732 47.619 0.00 0.00 39.55 3.18
2623 3298 4.148174 GCACGCATAAAAGGTTCAGTTTTC 59.852 41.667 0.00 0.00 0.00 2.29
2713 3395 1.134788 GCATCTACAACCGCACCTACT 60.135 52.381 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.731591 TCATAGGCTTAGCATCTGATCATG 58.268 41.667 6.53 0.00 0.00 3.07
3 4 6.171213 CAATCATAGGCTTAGCATCTGATCA 58.829 40.000 17.43 0.00 35.71 2.92
4 5 5.585445 CCAATCATAGGCTTAGCATCTGATC 59.415 44.000 17.43 0.00 35.71 2.92
7 8 4.008330 CCCAATCATAGGCTTAGCATCTG 58.992 47.826 6.53 1.74 0.00 2.90
8 9 3.654806 ACCCAATCATAGGCTTAGCATCT 59.345 43.478 6.53 0.00 0.00 2.90
9 10 4.026356 ACCCAATCATAGGCTTAGCATC 57.974 45.455 6.53 0.00 0.00 3.91
11 12 4.350816 ACATACCCAATCATAGGCTTAGCA 59.649 41.667 6.53 0.00 0.00 3.49
12 13 4.911390 ACATACCCAATCATAGGCTTAGC 58.089 43.478 0.00 0.00 0.00 3.09
15 16 3.721575 TGGACATACCCAATCATAGGCTT 59.278 43.478 0.00 0.00 38.00 4.35
16 17 3.326521 TGGACATACCCAATCATAGGCT 58.673 45.455 0.00 0.00 38.00 4.58
17 18 3.788227 TGGACATACCCAATCATAGGC 57.212 47.619 0.00 0.00 38.00 3.93
20 21 8.267183 GTGATATGATGGACATACCCAATCATA 58.733 37.037 6.22 6.22 43.12 2.15
21 22 7.037080 AGTGATATGATGGACATACCCAATCAT 60.037 37.037 0.00 0.00 43.12 2.45
22 23 6.273026 AGTGATATGATGGACATACCCAATCA 59.727 38.462 0.00 0.00 43.12 2.57
23 24 6.715280 AGTGATATGATGGACATACCCAATC 58.285 40.000 0.00 0.00 43.12 2.67
24 25 6.503217 AGAGTGATATGATGGACATACCCAAT 59.497 38.462 0.00 0.00 43.12 3.16
25 26 5.846164 AGAGTGATATGATGGACATACCCAA 59.154 40.000 0.00 0.00 43.12 4.12
26 27 5.406163 AGAGTGATATGATGGACATACCCA 58.594 41.667 0.00 0.00 43.12 4.51
27 28 6.212388 AGAAGAGTGATATGATGGACATACCC 59.788 42.308 0.00 0.00 43.12 3.69
28 29 7.238486 AGAAGAGTGATATGATGGACATACC 57.762 40.000 0.00 0.00 43.12 2.73
31 32 9.097946 TCATTAGAAGAGTGATATGATGGACAT 57.902 33.333 0.00 0.00 42.39 3.06
32 33 8.482852 TCATTAGAAGAGTGATATGATGGACA 57.517 34.615 0.00 0.00 0.00 4.02
33 34 9.368674 CATCATTAGAAGAGTGATATGATGGAC 57.631 37.037 12.67 0.00 42.50 4.02
34 35 9.097946 ACATCATTAGAAGAGTGATATGATGGA 57.902 33.333 20.51 0.00 46.80 3.41
35 36 9.152595 CACATCATTAGAAGAGTGATATGATGG 57.847 37.037 20.51 10.34 46.80 3.51
41 42 9.585369 AGAGATCACATCATTAGAAGAGTGATA 57.415 33.333 0.00 0.00 41.10 2.15
42 43 8.481492 AGAGATCACATCATTAGAAGAGTGAT 57.519 34.615 5.64 5.64 42.39 3.06
43 44 7.894753 AGAGATCACATCATTAGAAGAGTGA 57.105 36.000 0.00 0.00 37.99 3.41
44 45 8.945481 AAAGAGATCACATCATTAGAAGAGTG 57.055 34.615 0.00 0.00 0.00 3.51
78 79 5.304686 TCCTAACCAAAGACATGAGTTGT 57.695 39.130 0.00 0.00 42.79 3.32
79 80 6.438763 GTTTCCTAACCAAAGACATGAGTTG 58.561 40.000 0.00 0.11 0.00 3.16
80 81 6.635030 GTTTCCTAACCAAAGACATGAGTT 57.365 37.500 0.00 0.00 0.00 3.01
94 95 5.381174 AAATGCGGTTAAGGTTTCCTAAC 57.619 39.130 0.00 0.00 31.13 2.34
95 96 6.941436 TCTTAAATGCGGTTAAGGTTTCCTAA 59.059 34.615 15.26 0.00 40.18 2.69
96 97 6.474630 TCTTAAATGCGGTTAAGGTTTCCTA 58.525 36.000 15.26 0.00 40.18 2.94
97 98 5.318630 TCTTAAATGCGGTTAAGGTTTCCT 58.681 37.500 15.26 0.00 40.18 3.36
98 99 5.632244 TCTTAAATGCGGTTAAGGTTTCC 57.368 39.130 15.26 0.00 40.18 3.13
99 100 6.087159 CGTTTCTTAAATGCGGTTAAGGTTTC 59.913 38.462 15.26 6.66 40.18 2.78
100 101 5.916320 CGTTTCTTAAATGCGGTTAAGGTTT 59.084 36.000 15.26 0.00 40.18 3.27
101 102 5.239087 TCGTTTCTTAAATGCGGTTAAGGTT 59.761 36.000 15.26 0.00 40.18 3.50
102 103 4.756135 TCGTTTCTTAAATGCGGTTAAGGT 59.244 37.500 15.26 0.00 40.18 3.50
103 104 5.285798 TCGTTTCTTAAATGCGGTTAAGG 57.714 39.130 15.26 4.01 40.18 2.69
104 105 4.786575 GCTCGTTTCTTAAATGCGGTTAAG 59.213 41.667 11.05 11.05 40.83 1.85
105 106 4.453136 AGCTCGTTTCTTAAATGCGGTTAA 59.547 37.500 0.00 0.00 0.00 2.01
106 107 3.998341 AGCTCGTTTCTTAAATGCGGTTA 59.002 39.130 0.00 0.00 0.00 2.85
107 108 2.812011 AGCTCGTTTCTTAAATGCGGTT 59.188 40.909 0.00 0.00 0.00 4.44
108 109 2.423577 AGCTCGTTTCTTAAATGCGGT 58.576 42.857 0.00 0.00 0.00 5.68
109 110 3.617263 ACTAGCTCGTTTCTTAAATGCGG 59.383 43.478 0.00 0.00 0.00 5.69
110 111 4.563184 AGACTAGCTCGTTTCTTAAATGCG 59.437 41.667 0.00 0.00 0.00 4.73
111 112 6.752815 ACTAGACTAGCTCGTTTCTTAAATGC 59.247 38.462 9.52 0.00 0.00 3.56
112 113 9.784680 TTACTAGACTAGCTCGTTTCTTAAATG 57.215 33.333 9.52 0.00 0.00 2.32
114 115 9.837525 CTTTACTAGACTAGCTCGTTTCTTAAA 57.162 33.333 9.52 3.43 0.00 1.52
115 116 9.224267 TCTTTACTAGACTAGCTCGTTTCTTAA 57.776 33.333 9.52 0.00 0.00 1.85
116 117 8.783833 TCTTTACTAGACTAGCTCGTTTCTTA 57.216 34.615 9.52 0.00 0.00 2.10
117 118 7.684937 TCTTTACTAGACTAGCTCGTTTCTT 57.315 36.000 9.52 0.00 0.00 2.52
131 132 5.243283 GTGTCCCTTGTGAGTCTTTACTAGA 59.757 44.000 0.00 0.00 35.56 2.43
132 133 5.244178 AGTGTCCCTTGTGAGTCTTTACTAG 59.756 44.000 0.00 0.00 35.56 2.57
133 134 5.010719 CAGTGTCCCTTGTGAGTCTTTACTA 59.989 44.000 0.00 0.00 35.56 1.82
134 135 3.967987 AGTGTCCCTTGTGAGTCTTTACT 59.032 43.478 0.00 0.00 39.21 2.24
135 136 4.058817 CAGTGTCCCTTGTGAGTCTTTAC 58.941 47.826 0.00 0.00 0.00 2.01
136 137 3.709653 ACAGTGTCCCTTGTGAGTCTTTA 59.290 43.478 0.00 0.00 0.00 1.85
137 138 2.505819 ACAGTGTCCCTTGTGAGTCTTT 59.494 45.455 0.00 0.00 0.00 2.52
138 139 2.119495 ACAGTGTCCCTTGTGAGTCTT 58.881 47.619 0.00 0.00 0.00 3.01
139 140 1.414181 CACAGTGTCCCTTGTGAGTCT 59.586 52.381 0.00 0.00 45.79 3.24
140 141 1.139058 ACACAGTGTCCCTTGTGAGTC 59.861 52.381 11.16 0.00 45.79 3.36
141 142 1.204146 ACACAGTGTCCCTTGTGAGT 58.796 50.000 11.16 0.00 45.79 3.41
142 143 2.332063 AACACAGTGTCCCTTGTGAG 57.668 50.000 6.67 0.00 45.79 3.51
143 144 2.290641 ACAAACACAGTGTCCCTTGTGA 60.291 45.455 17.70 0.00 45.79 3.58
145 146 2.507407 ACAAACACAGTGTCCCTTGT 57.493 45.000 14.11 14.11 27.59 3.16
146 147 3.866883 AAACAAACACAGTGTCCCTTG 57.133 42.857 6.67 10.61 0.00 3.61
147 148 4.953579 ACATAAACAAACACAGTGTCCCTT 59.046 37.500 6.67 0.00 0.00 3.95
148 149 4.532834 ACATAAACAAACACAGTGTCCCT 58.467 39.130 6.67 0.00 0.00 4.20
149 150 4.911514 ACATAAACAAACACAGTGTCCC 57.088 40.909 6.67 0.00 0.00 4.46
150 151 6.205853 TGGATACATAAACAAACACAGTGTCC 59.794 38.462 6.67 0.00 46.17 4.02
151 152 7.197071 TGGATACATAAACAAACACAGTGTC 57.803 36.000 6.67 0.00 46.17 3.67
169 170 6.818644 ACAGACTCAAATACATGTGTGGATAC 59.181 38.462 9.11 1.79 0.00 2.24
170 171 6.946340 ACAGACTCAAATACATGTGTGGATA 58.054 36.000 9.11 0.00 0.00 2.59
171 172 5.809001 ACAGACTCAAATACATGTGTGGAT 58.191 37.500 9.11 0.00 0.00 3.41
172 173 5.227569 ACAGACTCAAATACATGTGTGGA 57.772 39.130 9.11 2.88 0.00 4.02
173 174 5.947228 AACAGACTCAAATACATGTGTGG 57.053 39.130 9.11 0.00 0.00 4.17
210 211 9.793259 TCTTGATAAGTGTTTATTCTTCAAGGT 57.207 29.630 8.86 0.00 33.04 3.50
217 218 9.793259 TCCTTGTTCTTGATAAGTGTTTATTCT 57.207 29.630 0.00 0.00 29.67 2.40
224 225 8.462016 GCATATTTCCTTGTTCTTGATAAGTGT 58.538 33.333 0.00 0.00 0.00 3.55
225 226 8.680903 AGCATATTTCCTTGTTCTTGATAAGTG 58.319 33.333 0.00 0.00 0.00 3.16
226 227 8.814038 AGCATATTTCCTTGTTCTTGATAAGT 57.186 30.769 0.00 0.00 0.00 2.24
256 257 9.320295 TGACCCTGGAGAAAATAATTAATTTGT 57.680 29.630 5.91 0.00 37.85 2.83
260 261 9.713684 TGATTGACCCTGGAGAAAATAATTAAT 57.286 29.630 0.00 0.00 0.00 1.40
261 262 9.713684 ATGATTGACCCTGGAGAAAATAATTAA 57.286 29.630 0.00 0.00 0.00 1.40
262 263 9.135189 CATGATTGACCCTGGAGAAAATAATTA 57.865 33.333 0.00 0.00 0.00 1.40
263 264 7.840716 TCATGATTGACCCTGGAGAAAATAATT 59.159 33.333 0.00 0.00 0.00 1.40
264 265 7.356680 TCATGATTGACCCTGGAGAAAATAAT 58.643 34.615 0.00 0.00 0.00 1.28
265 266 6.730447 TCATGATTGACCCTGGAGAAAATAA 58.270 36.000 0.00 0.00 0.00 1.40
266 267 6.325993 TCATGATTGACCCTGGAGAAAATA 57.674 37.500 0.00 0.00 0.00 1.40
267 268 5.197224 TCATGATTGACCCTGGAGAAAAT 57.803 39.130 0.00 0.00 0.00 1.82
268 269 4.656100 TCATGATTGACCCTGGAGAAAA 57.344 40.909 0.00 0.00 0.00 2.29
269 270 4.656100 TTCATGATTGACCCTGGAGAAA 57.344 40.909 0.00 0.00 0.00 2.52
270 271 4.656100 TTTCATGATTGACCCTGGAGAA 57.344 40.909 0.00 0.00 0.00 2.87
271 272 4.043310 AGTTTTCATGATTGACCCTGGAGA 59.957 41.667 0.00 0.00 0.00 3.71
272 273 4.338879 AGTTTTCATGATTGACCCTGGAG 58.661 43.478 0.00 0.00 0.00 3.86
273 274 4.387026 AGTTTTCATGATTGACCCTGGA 57.613 40.909 0.00 0.00 0.00 3.86
274 275 5.945784 TCTTAGTTTTCATGATTGACCCTGG 59.054 40.000 0.00 0.00 0.00 4.45
275 276 7.636150 ATCTTAGTTTTCATGATTGACCCTG 57.364 36.000 0.00 0.00 0.00 4.45
276 277 9.347240 CATATCTTAGTTTTCATGATTGACCCT 57.653 33.333 0.00 0.00 0.00 4.34
277 278 9.125026 ACATATCTTAGTTTTCATGATTGACCC 57.875 33.333 0.00 0.00 0.00 4.46
326 327 2.945008 CCTCTTGCAAAAGTGAGTCACA 59.055 45.455 24.73 0.10 36.74 3.58
327 328 3.206150 TCCTCTTGCAAAAGTGAGTCAC 58.794 45.455 15.78 15.78 34.10 3.67
328 329 3.558931 TCCTCTTGCAAAAGTGAGTCA 57.441 42.857 11.26 0.00 0.00 3.41
329 330 3.817647 ACATCCTCTTGCAAAAGTGAGTC 59.182 43.478 11.26 0.00 0.00 3.36
330 331 3.825328 ACATCCTCTTGCAAAAGTGAGT 58.175 40.909 11.26 0.00 0.00 3.41
331 332 7.798596 ATATACATCCTCTTGCAAAAGTGAG 57.201 36.000 0.00 3.41 0.00 3.51
332 333 9.494271 GATATATACATCCTCTTGCAAAAGTGA 57.506 33.333 0.00 0.00 0.00 3.41
333 334 9.499479 AGATATATACATCCTCTTGCAAAAGTG 57.501 33.333 0.00 0.00 0.00 3.16
336 337 9.658799 GCTAGATATATACATCCTCTTGCAAAA 57.341 33.333 0.00 0.00 35.64 2.44
337 338 9.040259 AGCTAGATATATACATCCTCTTGCAAA 57.960 33.333 14.76 0.00 37.23 3.68
338 339 8.601047 AGCTAGATATATACATCCTCTTGCAA 57.399 34.615 14.76 0.00 37.23 4.08
339 340 8.473219 CAAGCTAGATATATACATCCTCTTGCA 58.527 37.037 14.76 0.00 37.23 4.08
340 341 8.690884 TCAAGCTAGATATATACATCCTCTTGC 58.309 37.037 10.32 8.00 35.74 4.01
342 343 9.420118 CCTCAAGCTAGATATATACATCCTCTT 57.580 37.037 0.00 0.00 0.00 2.85
343 344 7.505585 GCCTCAAGCTAGATATATACATCCTCT 59.494 40.741 0.00 0.00 38.99 3.69
344 345 7.657336 GCCTCAAGCTAGATATATACATCCTC 58.343 42.308 0.00 0.00 38.99 3.71
345 346 7.595819 GCCTCAAGCTAGATATATACATCCT 57.404 40.000 0.00 0.00 38.99 3.24
361 362 0.394080 AGATGCCTCAAGCCTCAAGC 60.394 55.000 0.00 0.00 42.71 4.01
362 363 1.666054 GAGATGCCTCAAGCCTCAAG 58.334 55.000 0.00 0.00 42.71 3.02
363 364 0.254178 GGAGATGCCTCAAGCCTCAA 59.746 55.000 0.00 0.00 42.71 3.02
364 365 0.911045 TGGAGATGCCTCAAGCCTCA 60.911 55.000 0.00 0.00 42.71 3.86
365 366 0.254178 TTGGAGATGCCTCAAGCCTC 59.746 55.000 0.00 0.00 42.71 4.70
366 367 0.034670 GTTGGAGATGCCTCAAGCCT 60.035 55.000 0.00 0.00 42.71 4.58
367 368 0.322816 TGTTGGAGATGCCTCAAGCC 60.323 55.000 0.00 0.00 42.71 4.35
368 369 0.807496 GTGTTGGAGATGCCTCAAGC 59.193 55.000 0.00 0.00 41.20 4.01
369 370 2.189594 TGTGTTGGAGATGCCTCAAG 57.810 50.000 0.00 0.00 41.20 3.02
370 371 2.507484 CTTGTGTTGGAGATGCCTCAA 58.493 47.619 0.00 0.00 41.20 3.02
371 372 1.883638 GCTTGTGTTGGAGATGCCTCA 60.884 52.381 0.00 0.00 41.20 3.86
372 373 0.807496 GCTTGTGTTGGAGATGCCTC 59.193 55.000 0.00 0.00 38.70 4.70
373 374 0.610232 GGCTTGTGTTGGAGATGCCT 60.610 55.000 0.00 0.00 35.75 4.75
374 375 1.598701 GGGCTTGTGTTGGAGATGCC 61.599 60.000 0.00 0.00 37.42 4.40
375 376 0.610232 AGGGCTTGTGTTGGAGATGC 60.610 55.000 0.00 0.00 0.00 3.91
376 377 1.915141 AAGGGCTTGTGTTGGAGATG 58.085 50.000 0.00 0.00 0.00 2.90
377 378 3.806949 TTAAGGGCTTGTGTTGGAGAT 57.193 42.857 0.00 0.00 0.00 2.75
378 379 3.586470 TTTAAGGGCTTGTGTTGGAGA 57.414 42.857 0.00 0.00 0.00 3.71
379 380 3.550030 CGTTTTAAGGGCTTGTGTTGGAG 60.550 47.826 0.00 0.00 0.00 3.86
380 381 2.359531 CGTTTTAAGGGCTTGTGTTGGA 59.640 45.455 0.00 0.00 0.00 3.53
381 382 2.544903 CCGTTTTAAGGGCTTGTGTTGG 60.545 50.000 0.00 0.00 0.00 3.77
382 383 2.359531 TCCGTTTTAAGGGCTTGTGTTG 59.640 45.455 0.00 0.00 34.04 3.33
383 384 2.359848 GTCCGTTTTAAGGGCTTGTGTT 59.640 45.455 0.00 0.00 34.04 3.32
384 385 1.951602 GTCCGTTTTAAGGGCTTGTGT 59.048 47.619 0.00 0.00 34.04 3.72
385 386 1.950909 TGTCCGTTTTAAGGGCTTGTG 59.049 47.619 0.00 0.00 33.78 3.33
386 387 2.351706 TGTCCGTTTTAAGGGCTTGT 57.648 45.000 0.00 0.00 33.78 3.16
387 388 2.030274 CCTTGTCCGTTTTAAGGGCTTG 60.030 50.000 0.00 0.00 37.82 4.01
388 389 2.235891 CCTTGTCCGTTTTAAGGGCTT 58.764 47.619 0.00 0.00 37.82 4.35
389 390 1.905637 CCTTGTCCGTTTTAAGGGCT 58.094 50.000 0.00 0.00 37.82 5.19
390 391 0.242825 GCCTTGTCCGTTTTAAGGGC 59.757 55.000 0.00 0.00 40.98 5.19
391 392 1.611519 TGCCTTGTCCGTTTTAAGGG 58.388 50.000 0.00 0.00 40.98 3.95
392 393 3.719173 TTTGCCTTGTCCGTTTTAAGG 57.281 42.857 0.00 0.00 43.00 2.69
393 394 6.310224 CCAATATTTGCCTTGTCCGTTTTAAG 59.690 38.462 0.00 0.00 0.00 1.85
394 395 6.159988 CCAATATTTGCCTTGTCCGTTTTAA 58.840 36.000 0.00 0.00 0.00 1.52
395 396 5.244178 ACCAATATTTGCCTTGTCCGTTTTA 59.756 36.000 0.00 0.00 0.00 1.52
396 397 4.039852 ACCAATATTTGCCTTGTCCGTTTT 59.960 37.500 0.00 0.00 0.00 2.43
397 398 3.576550 ACCAATATTTGCCTTGTCCGTTT 59.423 39.130 0.00 0.00 0.00 3.60
398 399 3.161866 ACCAATATTTGCCTTGTCCGTT 58.838 40.909 0.00 0.00 0.00 4.44
399 400 2.752903 GACCAATATTTGCCTTGTCCGT 59.247 45.455 0.00 0.00 0.00 4.69
400 401 2.223249 CGACCAATATTTGCCTTGTCCG 60.223 50.000 0.00 0.00 0.00 4.79
401 402 3.013921 TCGACCAATATTTGCCTTGTCC 58.986 45.455 0.00 0.00 0.00 4.02
402 403 3.438781 TGTCGACCAATATTTGCCTTGTC 59.561 43.478 14.12 0.00 0.00 3.18
403 404 3.417101 TGTCGACCAATATTTGCCTTGT 58.583 40.909 14.12 0.00 0.00 3.16
404 405 4.142403 ACATGTCGACCAATATTTGCCTTG 60.142 41.667 14.12 0.00 0.00 3.61
405 406 4.016444 ACATGTCGACCAATATTTGCCTT 58.984 39.130 14.12 0.00 0.00 4.35
406 407 3.620488 ACATGTCGACCAATATTTGCCT 58.380 40.909 14.12 0.00 0.00 4.75
407 408 3.243068 GGACATGTCGACCAATATTTGCC 60.243 47.826 19.33 0.00 0.00 4.52
408 409 3.546020 CGGACATGTCGACCAATATTTGC 60.546 47.826 19.33 0.00 0.00 3.68
409 410 3.002246 CCGGACATGTCGACCAATATTTG 59.998 47.826 19.33 2.17 0.00 2.32
410 411 3.202906 CCGGACATGTCGACCAATATTT 58.797 45.455 19.33 0.00 0.00 1.40
411 412 2.484770 CCCGGACATGTCGACCAATATT 60.485 50.000 19.33 0.00 0.00 1.28
412 413 1.070134 CCCGGACATGTCGACCAATAT 59.930 52.381 19.33 0.00 0.00 1.28
413 414 0.462375 CCCGGACATGTCGACCAATA 59.538 55.000 19.33 0.00 0.00 1.90
414 415 1.220749 CCCGGACATGTCGACCAAT 59.779 57.895 19.33 0.00 0.00 3.16
415 416 1.261938 ATCCCGGACATGTCGACCAA 61.262 55.000 19.33 4.58 0.00 3.67
416 417 1.684391 ATCCCGGACATGTCGACCA 60.684 57.895 19.33 4.34 0.00 4.02
417 418 1.227263 CATCCCGGACATGTCGACC 60.227 63.158 19.33 5.88 0.00 4.79
418 419 0.108329 AACATCCCGGACATGTCGAC 60.108 55.000 19.33 9.11 33.12 4.20
419 420 0.174845 GAACATCCCGGACATGTCGA 59.825 55.000 19.33 11.63 33.12 4.20
420 421 0.810031 GGAACATCCCGGACATGTCG 60.810 60.000 19.33 13.98 33.12 4.35
421 422 0.810031 CGGAACATCCCGGACATGTC 60.810 60.000 17.91 17.91 45.43 3.06
422 423 1.220749 CGGAACATCCCGGACATGT 59.779 57.895 0.73 8.25 45.43 3.21
423 424 4.124910 CGGAACATCCCGGACATG 57.875 61.111 0.73 7.49 45.43 3.21
430 431 0.531974 TATCTTGCGCGGAACATCCC 60.532 55.000 9.68 0.00 31.13 3.85
431 432 0.861837 CTATCTTGCGCGGAACATCC 59.138 55.000 9.68 0.00 0.00 3.51
432 433 0.861837 CCTATCTTGCGCGGAACATC 59.138 55.000 9.68 0.00 0.00 3.06
433 434 0.532862 CCCTATCTTGCGCGGAACAT 60.533 55.000 9.68 7.78 0.00 2.71
434 435 1.153449 CCCTATCTTGCGCGGAACA 60.153 57.895 9.68 0.00 0.00 3.18
435 436 1.887707 CCCCTATCTTGCGCGGAAC 60.888 63.158 9.68 0.00 0.00 3.62
436 437 2.028125 CTCCCCTATCTTGCGCGGAA 62.028 60.000 13.78 13.78 0.00 4.30
437 438 2.443203 TCCCCTATCTTGCGCGGA 60.443 61.111 8.83 0.00 0.00 5.54
438 439 2.029666 CTCCCCTATCTTGCGCGG 59.970 66.667 8.83 0.00 0.00 6.46
439 440 2.028125 TTCCTCCCCTATCTTGCGCG 62.028 60.000 0.00 0.00 0.00 6.86
440 441 0.250081 CTTCCTCCCCTATCTTGCGC 60.250 60.000 0.00 0.00 0.00 6.09
441 442 0.250081 GCTTCCTCCCCTATCTTGCG 60.250 60.000 0.00 0.00 0.00 4.85
442 443 0.109532 GGCTTCCTCCCCTATCTTGC 59.890 60.000 0.00 0.00 0.00 4.01
443 444 1.696884 GAGGCTTCCTCCCCTATCTTG 59.303 57.143 1.44 0.00 44.36 3.02
444 445 2.110753 GAGGCTTCCTCCCCTATCTT 57.889 55.000 1.44 0.00 44.36 2.40
445 446 3.882319 GAGGCTTCCTCCCCTATCT 57.118 57.895 1.44 0.00 44.36 1.98
454 455 2.649816 AGGTTAACATTGGAGGCTTCCT 59.350 45.455 16.82 0.00 44.36 3.36
455 456 2.755103 CAGGTTAACATTGGAGGCTTCC 59.245 50.000 8.18 8.18 44.31 3.46
456 457 2.164422 GCAGGTTAACATTGGAGGCTTC 59.836 50.000 8.10 0.00 0.00 3.86
457 458 2.171003 GCAGGTTAACATTGGAGGCTT 58.829 47.619 8.10 0.00 0.00 4.35
458 459 1.075374 TGCAGGTTAACATTGGAGGCT 59.925 47.619 8.10 0.00 0.00 4.58
459 460 1.544724 TGCAGGTTAACATTGGAGGC 58.455 50.000 8.10 0.13 0.00 4.70
460 461 4.021192 ACAAATGCAGGTTAACATTGGAGG 60.021 41.667 8.10 3.87 36.64 4.30
461 462 5.138125 ACAAATGCAGGTTAACATTGGAG 57.862 39.130 8.10 0.00 36.64 3.86
462 463 4.021544 GGACAAATGCAGGTTAACATTGGA 60.022 41.667 8.10 6.95 36.64 3.53
463 464 4.244862 GGACAAATGCAGGTTAACATTGG 58.755 43.478 8.10 0.00 36.64 3.16
464 465 3.919804 CGGACAAATGCAGGTTAACATTG 59.080 43.478 8.10 6.47 36.64 2.82
465 466 3.572255 ACGGACAAATGCAGGTTAACATT 59.428 39.130 8.10 0.00 38.11 2.71
466 467 3.153919 ACGGACAAATGCAGGTTAACAT 58.846 40.909 8.10 0.00 0.00 2.71
467 468 2.577700 ACGGACAAATGCAGGTTAACA 58.422 42.857 8.10 0.00 0.00 2.41
468 469 3.749609 ACTACGGACAAATGCAGGTTAAC 59.250 43.478 0.00 0.00 0.00 2.01
469 470 3.749088 CACTACGGACAAATGCAGGTTAA 59.251 43.478 0.00 0.00 0.00 2.01
470 471 3.331150 CACTACGGACAAATGCAGGTTA 58.669 45.455 0.00 0.00 0.00 2.85
471 472 2.151202 CACTACGGACAAATGCAGGTT 58.849 47.619 0.00 0.00 0.00 3.50
472 473 1.808411 CACTACGGACAAATGCAGGT 58.192 50.000 0.00 0.00 0.00 4.00
473 474 0.447801 GCACTACGGACAAATGCAGG 59.552 55.000 0.00 0.00 36.30 4.85
474 475 1.155889 TGCACTACGGACAAATGCAG 58.844 50.000 0.00 0.00 41.18 4.41
475 476 3.314083 TGCACTACGGACAAATGCA 57.686 47.368 0.00 0.00 43.70 3.96
476 477 1.468520 ACATGCACTACGGACAAATGC 59.531 47.619 0.00 0.00 36.81 3.56
477 478 2.741517 TCACATGCACTACGGACAAATG 59.258 45.455 0.00 0.00 0.00 2.32
478 479 3.002791 CTCACATGCACTACGGACAAAT 58.997 45.455 0.00 0.00 0.00 2.32
479 480 2.412870 CTCACATGCACTACGGACAAA 58.587 47.619 0.00 0.00 0.00 2.83
480 481 1.337728 CCTCACATGCACTACGGACAA 60.338 52.381 0.00 0.00 0.00 3.18
481 482 0.246360 CCTCACATGCACTACGGACA 59.754 55.000 0.00 0.00 0.00 4.02
482 483 0.460284 CCCTCACATGCACTACGGAC 60.460 60.000 0.00 0.00 0.00 4.79
483 484 1.897423 CCCTCACATGCACTACGGA 59.103 57.895 0.00 0.00 0.00 4.69
484 485 1.815421 GCCCTCACATGCACTACGG 60.815 63.158 0.00 0.00 0.00 4.02
485 486 1.079197 TGCCCTCACATGCACTACG 60.079 57.895 0.00 0.00 31.31 3.51
486 487 0.036010 ACTGCCCTCACATGCACTAC 60.036 55.000 0.00 0.00 33.17 2.73
487 488 0.036105 CACTGCCCTCACATGCACTA 60.036 55.000 0.00 0.00 33.17 2.74
488 489 1.303074 CACTGCCCTCACATGCACT 60.303 57.895 0.00 0.00 33.17 4.40
489 490 1.174712 AACACTGCCCTCACATGCAC 61.175 55.000 0.00 0.00 33.17 4.57
490 491 0.467844 AAACACTGCCCTCACATGCA 60.468 50.000 0.00 0.00 35.86 3.96
491 492 0.675633 AAAACACTGCCCTCACATGC 59.324 50.000 0.00 0.00 0.00 4.06
512 513 8.673711 CCAAAATCGACTATGTATCAGGAAAAA 58.326 33.333 0.00 0.00 0.00 1.94
513 514 7.827236 ACCAAAATCGACTATGTATCAGGAAAA 59.173 33.333 0.00 0.00 0.00 2.29
514 515 7.335627 ACCAAAATCGACTATGTATCAGGAAA 58.664 34.615 0.00 0.00 0.00 3.13
515 516 6.884832 ACCAAAATCGACTATGTATCAGGAA 58.115 36.000 0.00 0.00 0.00 3.36
516 517 6.479972 ACCAAAATCGACTATGTATCAGGA 57.520 37.500 0.00 0.00 0.00 3.86
517 518 6.017934 CCAACCAAAATCGACTATGTATCAGG 60.018 42.308 0.00 0.00 0.00 3.86
518 519 6.511767 GCCAACCAAAATCGACTATGTATCAG 60.512 42.308 0.00 0.00 0.00 2.90
519 520 5.295787 GCCAACCAAAATCGACTATGTATCA 59.704 40.000 0.00 0.00 0.00 2.15
520 521 5.527582 AGCCAACCAAAATCGACTATGTATC 59.472 40.000 0.00 0.00 0.00 2.24
521 522 5.437060 AGCCAACCAAAATCGACTATGTAT 58.563 37.500 0.00 0.00 0.00 2.29
522 523 4.839121 AGCCAACCAAAATCGACTATGTA 58.161 39.130 0.00 0.00 0.00 2.29
523 524 3.686016 AGCCAACCAAAATCGACTATGT 58.314 40.909 0.00 0.00 0.00 2.29
524 525 4.260784 GCTAGCCAACCAAAATCGACTATG 60.261 45.833 2.29 0.00 0.00 2.23
525 526 3.877508 GCTAGCCAACCAAAATCGACTAT 59.122 43.478 2.29 0.00 0.00 2.12
526 527 3.267483 GCTAGCCAACCAAAATCGACTA 58.733 45.455 2.29 0.00 0.00 2.59
527 528 2.084546 GCTAGCCAACCAAAATCGACT 58.915 47.619 2.29 0.00 0.00 4.18
528 529 1.132453 GGCTAGCCAACCAAAATCGAC 59.868 52.381 29.33 0.00 35.81 4.20
529 530 1.459450 GGCTAGCCAACCAAAATCGA 58.541 50.000 29.33 0.00 35.81 3.59
530 531 0.098728 CGGCTAGCCAACCAAAATCG 59.901 55.000 32.47 11.19 35.37 3.34
531 532 0.455815 CCGGCTAGCCAACCAAAATC 59.544 55.000 32.47 2.33 35.37 2.17
532 533 0.039035 TCCGGCTAGCCAACCAAAAT 59.961 50.000 32.47 0.00 35.37 1.82
533 534 0.039035 ATCCGGCTAGCCAACCAAAA 59.961 50.000 32.47 9.98 35.37 2.44
534 535 0.679640 CATCCGGCTAGCCAACCAAA 60.680 55.000 32.47 11.38 35.37 3.28
535 536 1.077787 CATCCGGCTAGCCAACCAA 60.078 57.895 32.47 13.15 35.37 3.67
536 537 2.252072 GACATCCGGCTAGCCAACCA 62.252 60.000 32.47 13.53 35.37 3.67
541 542 0.603975 GGAATGACATCCGGCTAGCC 60.604 60.000 24.75 24.75 0.00 3.93
562 566 0.854705 CGCAAACTTGAAGGCTTTGC 59.145 50.000 18.03 18.03 44.13 3.68
571 575 2.287547 GCCAAAGTGATCGCAAACTTGA 60.288 45.455 9.33 0.00 36.75 3.02
574 578 0.238289 CGCCAAAGTGATCGCAAACT 59.762 50.000 9.33 0.00 0.00 2.66
581 585 1.136057 GTTCGAACCGCCAAAGTGATC 60.136 52.381 17.68 0.00 0.00 2.92
605 609 4.099585 CGTTCGTGGACGCGTTCG 62.100 66.667 15.53 18.65 39.60 3.95
609 613 4.054455 CAACCGTTCGTGGACGCG 62.054 66.667 3.53 3.53 41.50 6.01
636 641 8.917088 AGACATTTTCTTTCTCTTCCAATTGAA 58.083 29.630 7.12 0.00 0.00 2.69
647 652 5.808030 CGGGAGTCTAGACATTTTCTTTCTC 59.192 44.000 24.44 9.61 35.55 2.87
648 653 5.480772 TCGGGAGTCTAGACATTTTCTTTCT 59.519 40.000 24.44 0.00 35.55 2.52
649 654 5.721232 TCGGGAGTCTAGACATTTTCTTTC 58.279 41.667 24.44 10.33 35.55 2.62
651 656 5.017490 TCTCGGGAGTCTAGACATTTTCTT 58.983 41.667 24.44 1.74 35.55 2.52
652 657 4.601084 TCTCGGGAGTCTAGACATTTTCT 58.399 43.478 24.44 2.52 38.51 2.52
653 658 4.985538 TCTCGGGAGTCTAGACATTTTC 57.014 45.455 24.44 12.77 0.00 2.29
673 678 5.992217 ACAGAGACTGGTGTATGTCTTTTTC 59.008 40.000 0.00 0.00 42.79 2.29
678 683 3.093057 GGACAGAGACTGGTGTATGTCT 58.907 50.000 19.58 0.00 45.06 3.41
824 829 1.349067 GGCCATGGTAGGTAGGTAGG 58.651 60.000 14.67 0.00 0.00 3.18
825 830 1.349067 GGGCCATGGTAGGTAGGTAG 58.651 60.000 14.67 0.00 0.00 3.18
826 831 0.470456 CGGGCCATGGTAGGTAGGTA 60.470 60.000 14.67 0.00 0.00 3.08
827 832 1.764854 CGGGCCATGGTAGGTAGGT 60.765 63.158 14.67 0.00 0.00 3.08
941 947 3.240069 GCACGGCGTCGATATATAAACT 58.760 45.455 20.03 0.00 40.11 2.66
979 985 4.742201 CGGTGGGTGAGTGGAGCG 62.742 72.222 0.00 0.00 0.00 5.03
992 998 3.585990 GAATCGCCATGGCCGGTG 61.586 66.667 30.79 16.82 37.98 4.94
1599 1608 2.670019 TACTAATGGCGGCCTCTAGA 57.330 50.000 25.20 6.69 0.00 2.43
1615 1624 1.601171 CTCTGGCCAGCAGCTTACT 59.399 57.895 28.91 0.00 43.05 2.24
1629 1638 3.965539 CTCCTTGGCGCACCCTCTG 62.966 68.421 10.83 0.00 33.59 3.35
1716 1725 1.575419 AATTAGAGGTACCGCCACCA 58.425 50.000 12.54 0.00 41.40 4.17
1828 1837 8.193953 AGAATGTGAAAGGGATTTACAAACAT 57.806 30.769 0.00 0.00 40.44 2.71
1829 1838 7.595819 AGAATGTGAAAGGGATTTACAAACA 57.404 32.000 0.00 0.00 40.44 2.83
1831 1840 7.440856 GCAAAGAATGTGAAAGGGATTTACAAA 59.559 33.333 0.00 0.00 40.44 2.83
1832 1841 6.928492 GCAAAGAATGTGAAAGGGATTTACAA 59.072 34.615 0.00 0.00 40.44 2.41
1834 1843 6.691508 AGCAAAGAATGTGAAAGGGATTTAC 58.308 36.000 0.00 0.00 0.00 2.01
1841 2315 4.442073 CGTGAAAGCAAAGAATGTGAAAGG 59.558 41.667 0.00 0.00 0.00 3.11
1846 2320 3.951306 TCACGTGAAAGCAAAGAATGTG 58.049 40.909 17.62 0.00 0.00 3.21
1863 2337 4.265085 CGGCAATTTTAATGACCAATCACG 59.735 41.667 0.00 0.00 37.79 4.35
1865 2339 4.081752 AGCGGCAATTTTAATGACCAATCA 60.082 37.500 1.45 0.00 39.83 2.57
1874 2348 7.038659 TGTATTAAAGCAGCGGCAATTTTAAT 58.961 30.769 21.66 21.66 44.61 1.40
1884 2384 8.395633 ACTATTAAAGTTGTATTAAAGCAGCGG 58.604 33.333 0.00 0.00 33.35 5.52
1906 2406 3.325605 ACTACTCCCTCCCGAGTACTAT 58.674 50.000 0.00 0.00 43.00 2.12
1909 2409 2.703007 TCTACTACTCCCTCCCGAGTAC 59.297 54.545 0.00 0.00 43.00 2.73
1910 2410 2.971330 CTCTACTACTCCCTCCCGAGTA 59.029 54.545 0.00 0.00 43.00 2.59
1911 2411 1.770061 CTCTACTACTCCCTCCCGAGT 59.230 57.143 0.00 0.00 45.15 4.18
1912 2412 1.770061 ACTCTACTACTCCCTCCCGAG 59.230 57.143 0.00 0.00 35.88 4.63
1913 2413 1.890552 ACTCTACTACTCCCTCCCGA 58.109 55.000 0.00 0.00 0.00 5.14
1914 2414 4.370094 AATACTCTACTACTCCCTCCCG 57.630 50.000 0.00 0.00 0.00 5.14
1915 2415 7.926705 TGTATAATACTCTACTACTCCCTCCC 58.073 42.308 0.00 0.00 0.00 4.30
1988 2660 8.644374 AAGGTTAGCTGTTTAATTCAATGGTA 57.356 30.769 0.00 0.00 0.00 3.25
2033 2706 8.147704 ACCTTACAACAAAATTTCAAATCGGAT 58.852 29.630 0.00 0.00 0.00 4.18
2076 2749 4.634199 TCGTTAGAATTGTTCGAGGGTTT 58.366 39.130 0.00 0.00 34.02 3.27
2096 2769 9.651718 GGAGCATATAAGAAAGTTGTAAATTCG 57.348 33.333 0.00 0.00 0.00 3.34
2178 2852 8.132362 TGAAGTATTAACGCAAAACTGAATTGT 58.868 29.630 0.00 0.00 0.00 2.71
2186 2860 7.439204 TTTGTGTGAAGTATTAACGCAAAAC 57.561 32.000 13.70 0.00 45.90 2.43
2268 2942 4.271696 AGATTCGAAGACACCATCAACA 57.728 40.909 3.35 0.00 34.32 3.33
2365 3040 9.813446 CCTCCGTAAACTAATATAAGAGTGTTT 57.187 33.333 0.00 0.00 0.00 2.83
2366 3041 8.419442 CCCTCCGTAAACTAATATAAGAGTGTT 58.581 37.037 0.00 0.00 0.00 3.32
2367 3042 7.781693 TCCCTCCGTAAACTAATATAAGAGTGT 59.218 37.037 0.00 0.00 0.00 3.55
2368 3043 8.174733 TCCCTCCGTAAACTAATATAAGAGTG 57.825 38.462 0.00 0.00 0.00 3.51
2369 3044 8.003629 ACTCCCTCCGTAAACTAATATAAGAGT 58.996 37.037 0.00 0.00 0.00 3.24
2370 3045 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2371 3046 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
2372 3047 8.518702 GGTACTCCCTCCGTAAACTAATATAAG 58.481 40.741 0.00 0.00 0.00 1.73
2373 3048 8.227507 AGGTACTCCCTCCGTAAACTAATATAA 58.772 37.037 0.00 0.00 40.71 0.98
2374 3049 7.759607 AGGTACTCCCTCCGTAAACTAATATA 58.240 38.462 0.00 0.00 40.71 0.86
2375 3050 6.618501 AGGTACTCCCTCCGTAAACTAATAT 58.381 40.000 0.00 0.00 40.71 1.28
2376 3051 6.018433 AGGTACTCCCTCCGTAAACTAATA 57.982 41.667 0.00 0.00 40.71 0.98
2377 3052 4.876580 AGGTACTCCCTCCGTAAACTAAT 58.123 43.478 0.00 0.00 40.71 1.73
2378 3053 4.322057 AGGTACTCCCTCCGTAAACTAA 57.678 45.455 0.00 0.00 40.71 2.24
2379 3054 4.322057 AAGGTACTCCCTCCGTAAACTA 57.678 45.455 0.00 0.00 45.47 2.24
2380 3055 2.915657 AGGTACTCCCTCCGTAAACT 57.084 50.000 0.00 0.00 40.71 2.66
2381 3056 3.969287 AAAGGTACTCCCTCCGTAAAC 57.031 47.619 0.00 0.00 45.47 2.01
2382 3057 5.484998 ACATAAAAGGTACTCCCTCCGTAAA 59.515 40.000 0.00 0.00 45.47 2.01
2383 3058 5.025453 ACATAAAAGGTACTCCCTCCGTAA 58.975 41.667 0.00 0.00 45.47 3.18
2384 3059 4.613437 ACATAAAAGGTACTCCCTCCGTA 58.387 43.478 0.00 0.00 45.47 4.02
2385 3060 3.447950 ACATAAAAGGTACTCCCTCCGT 58.552 45.455 0.00 0.00 45.47 4.69
2386 3061 4.482952 AACATAAAAGGTACTCCCTCCG 57.517 45.455 0.00 0.00 45.47 4.63
2387 3062 6.946583 AGAAAAACATAAAAGGTACTCCCTCC 59.053 38.462 0.00 0.00 45.47 4.30
2388 3063 7.997773 AGAAAAACATAAAAGGTACTCCCTC 57.002 36.000 0.00 0.00 45.47 4.30
2396 3071 9.705290 ATGCGAATTAAGAAAAACATAAAAGGT 57.295 25.926 0.00 0.00 0.00 3.50
2397 3072 9.956797 CATGCGAATTAAGAAAAACATAAAAGG 57.043 29.630 0.00 0.00 0.00 3.11
2407 3082 9.594478 TGTCTAGATACATGCGAATTAAGAAAA 57.406 29.630 0.00 0.00 0.00 2.29
2408 3083 9.031360 GTGTCTAGATACATGCGAATTAAGAAA 57.969 33.333 14.20 0.00 0.00 2.52
2409 3084 8.194769 TGTGTCTAGATACATGCGAATTAAGAA 58.805 33.333 17.43 0.00 0.00 2.52
2410 3085 7.712797 TGTGTCTAGATACATGCGAATTAAGA 58.287 34.615 17.43 0.00 0.00 2.10
2411 3086 7.930513 TGTGTCTAGATACATGCGAATTAAG 57.069 36.000 17.43 0.00 0.00 1.85
2415 3090 9.794685 CTAATATGTGTCTAGATACATGCGAAT 57.205 33.333 33.32 21.28 42.03 3.34
2416 3091 8.793592 ACTAATATGTGTCTAGATACATGCGAA 58.206 33.333 33.32 20.25 42.03 4.70
2417 3092 8.336801 ACTAATATGTGTCTAGATACATGCGA 57.663 34.615 33.32 20.54 42.03 5.10
2517 3192 7.595819 AGAAACCAATCAATTTGTTACTCCA 57.404 32.000 0.00 0.00 33.15 3.86
2531 3206 9.952188 GCCACTCTTTTATAATAGAAACCAATC 57.048 33.333 7.01 0.00 0.00 2.67
2592 3267 0.529833 TTTTATGCGTGCCACCATGG 59.470 50.000 11.19 11.19 41.55 3.66
2603 3278 4.778904 TCGAAAACTGAACCTTTTATGCG 58.221 39.130 0.00 0.00 0.00 4.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.