Multiple sequence alignment - TraesCS4B01G354000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G354000 chr4B 100.000 2959 0 0 1 2959 645898841 645895883 0.000000e+00 5465.0
1 TraesCS4B01G354000 chr4B 77.950 322 51 17 1324 1632 635460709 635461023 1.810000e-42 183.0
2 TraesCS4B01G354000 chr4B 88.732 142 14 2 1302 1442 635030032 635030172 3.920000e-39 172.0
3 TraesCS4B01G354000 chr4D 89.448 2085 121 36 882 2913 501675711 501673673 0.000000e+00 2540.0
4 TraesCS4B01G354000 chr4D 90.141 142 12 2 1302 1442 495129701 495129841 1.810000e-42 183.0
5 TraesCS4B01G354000 chr4D 77.500 320 56 13 1324 1632 495520505 495520819 8.430000e-41 178.0
6 TraesCS4B01G354000 chr4D 86.667 150 15 4 1310 1455 495638772 495638920 8.490000e-36 161.0
7 TraesCS4B01G354000 chr4D 90.083 121 12 0 1314 1434 495074559 495074679 1.100000e-34 158.0
8 TraesCS4B01G354000 chr4D 100.000 35 0 0 2917 2951 501673637 501673603 6.850000e-07 65.8
9 TraesCS4B01G354000 chr4D 100.000 30 0 0 2883 2912 46028855 46028826 4.120000e-04 56.5
10 TraesCS4B01G354000 chr4A 89.314 627 49 12 176 792 184311127 184311745 0.000000e+00 771.0
11 TraesCS4B01G354000 chr4A 100.000 31 0 0 2883 2913 552901690 552901720 1.150000e-04 58.4
12 TraesCS4B01G354000 chr3A 88.782 624 52 10 179 792 54367888 54367273 0.000000e+00 749.0
13 TraesCS4B01G354000 chr3A 88.301 624 55 10 179 792 54341399 54340784 0.000000e+00 732.0
14 TraesCS4B01G354000 chr3A 88.301 624 55 10 176 789 54345179 54345794 0.000000e+00 732.0
15 TraesCS4B01G354000 chr3A 88.301 624 55 10 179 792 54354782 54354167 0.000000e+00 732.0
16 TraesCS4B01G354000 chr3A 87.981 624 57 10 176 789 54358252 54358867 0.000000e+00 721.0
17 TraesCS4B01G354000 chr3B 88.511 618 54 9 185 793 827283111 827283720 0.000000e+00 732.0
18 TraesCS4B01G354000 chr3B 88.455 615 54 9 188 793 827795499 827796105 0.000000e+00 726.0
19 TraesCS4B01G354000 chr2A 87.719 627 59 11 176 792 658244558 658245176 0.000000e+00 715.0
20 TraesCS4B01G354000 chr5A 81.132 265 30 16 1186 1442 674937366 674937618 8.370000e-46 195.0
21 TraesCS4B01G354000 chr5A 86.667 150 15 4 1310 1455 675319505 675319357 8.490000e-36 161.0
22 TraesCS4B01G354000 chr5A 92.708 96 5 1 3 98 38978566 38978659 1.430000e-28 137.0
23 TraesCS4B01G354000 chr5A 97.727 44 1 0 2916 2959 525696277 525696234 3.160000e-10 76.8
24 TraesCS4B01G354000 chr5D 92.708 96 5 1 3 98 49671320 49671413 1.430000e-28 137.0
25 TraesCS4B01G354000 chr7D 97.727 44 1 0 2916 2959 133425767 133425810 3.160000e-10 76.8
26 TraesCS4B01G354000 chr7D 97.727 44 1 0 2916 2959 133512917 133512960 3.160000e-10 76.8
27 TraesCS4B01G354000 chr1A 95.455 44 2 0 2916 2959 554973380 554973423 1.470000e-08 71.3
28 TraesCS4B01G354000 chr1A 100.000 31 0 0 2883 2913 73111031 73111061 1.150000e-04 58.4
29 TraesCS4B01G354000 chr2B 100.000 34 0 0 2880 2913 670843727 670843760 2.460000e-06 63.9
30 TraesCS4B01G354000 chr6A 94.872 39 1 1 2882 2919 65867245 65867207 3.190000e-05 60.2
31 TraesCS4B01G354000 chr1D 100.000 32 0 0 2882 2913 484024715 484024684 3.190000e-05 60.2
32 TraesCS4B01G354000 chr7B 100.000 31 0 0 2883 2913 735925809 735925839 1.150000e-04 58.4
33 TraesCS4B01G354000 chr2D 96.970 33 1 0 2881 2913 516866933 516866901 4.120000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G354000 chr4B 645895883 645898841 2958 True 5465.0 5465 100.000 1 2959 1 chr4B.!!$R1 2958
1 TraesCS4B01G354000 chr4D 501673603 501675711 2108 True 1302.9 2540 94.724 882 2951 2 chr4D.!!$R2 2069
2 TraesCS4B01G354000 chr4A 184311127 184311745 618 False 771.0 771 89.314 176 792 1 chr4A.!!$F1 616
3 TraesCS4B01G354000 chr3A 54367273 54367888 615 True 749.0 749 88.782 179 792 1 chr3A.!!$R3 613
4 TraesCS4B01G354000 chr3A 54340784 54341399 615 True 732.0 732 88.301 179 792 1 chr3A.!!$R1 613
5 TraesCS4B01G354000 chr3A 54345179 54345794 615 False 732.0 732 88.301 176 789 1 chr3A.!!$F1 613
6 TraesCS4B01G354000 chr3A 54354167 54354782 615 True 732.0 732 88.301 179 792 1 chr3A.!!$R2 613
7 TraesCS4B01G354000 chr3A 54358252 54358867 615 False 721.0 721 87.981 176 789 1 chr3A.!!$F2 613
8 TraesCS4B01G354000 chr3B 827283111 827283720 609 False 732.0 732 88.511 185 793 1 chr3B.!!$F1 608
9 TraesCS4B01G354000 chr3B 827795499 827796105 606 False 726.0 726 88.455 188 793 1 chr3B.!!$F2 605
10 TraesCS4B01G354000 chr2A 658244558 658245176 618 False 715.0 715 87.719 176 792 1 chr2A.!!$F1 616

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
971 983 0.02877 TTTGCGAACGAAACCAGCAG 59.971 50.0 0.0 0.0 39.11 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2853 2912 0.17668 CGGGCTGCACTTACTCTCAT 59.823 55.0 0.0 0.0 0.0 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.445452 GGGCATGCATGGATATTAGTTG 57.555 45.455 27.34 0.00 0.00 3.16
22 23 3.194116 GGGCATGCATGGATATTAGTTGG 59.806 47.826 27.34 0.00 0.00 3.77
23 24 4.081406 GGCATGCATGGATATTAGTTGGA 58.919 43.478 27.34 0.00 0.00 3.53
24 25 4.523943 GGCATGCATGGATATTAGTTGGAA 59.476 41.667 27.34 0.00 0.00 3.53
25 26 5.464168 GCATGCATGGATATTAGTTGGAAC 58.536 41.667 27.34 1.60 0.00 3.62
26 27 5.692814 CATGCATGGATATTAGTTGGAACG 58.307 41.667 19.40 0.00 0.00 3.95
27 28 5.029807 TGCATGGATATTAGTTGGAACGA 57.970 39.130 0.00 0.00 0.00 3.85
28 29 5.620206 TGCATGGATATTAGTTGGAACGAT 58.380 37.500 0.00 0.00 0.00 3.73
29 30 6.061441 TGCATGGATATTAGTTGGAACGATT 58.939 36.000 0.00 0.00 0.00 3.34
30 31 6.545666 TGCATGGATATTAGTTGGAACGATTT 59.454 34.615 0.00 0.00 0.00 2.17
31 32 6.857964 GCATGGATATTAGTTGGAACGATTTG 59.142 38.462 0.00 0.00 0.00 2.32
32 33 7.468631 GCATGGATATTAGTTGGAACGATTTGT 60.469 37.037 0.00 0.00 0.00 2.83
33 34 7.315247 TGGATATTAGTTGGAACGATTTGTG 57.685 36.000 0.00 0.00 0.00 3.33
34 35 6.317642 TGGATATTAGTTGGAACGATTTGTGG 59.682 38.462 0.00 0.00 0.00 4.17
35 36 6.238648 GGATATTAGTTGGAACGATTTGTGGG 60.239 42.308 0.00 0.00 0.00 4.61
36 37 2.649531 AGTTGGAACGATTTGTGGGA 57.350 45.000 0.00 0.00 0.00 4.37
37 38 3.154827 AGTTGGAACGATTTGTGGGAT 57.845 42.857 0.00 0.00 0.00 3.85
38 39 3.496331 AGTTGGAACGATTTGTGGGATT 58.504 40.909 0.00 0.00 0.00 3.01
39 40 4.658063 AGTTGGAACGATTTGTGGGATTA 58.342 39.130 0.00 0.00 0.00 1.75
40 41 5.074115 AGTTGGAACGATTTGTGGGATTAA 58.926 37.500 0.00 0.00 0.00 1.40
41 42 5.536916 AGTTGGAACGATTTGTGGGATTAAA 59.463 36.000 0.00 0.00 0.00 1.52
42 43 6.210584 AGTTGGAACGATTTGTGGGATTAAAT 59.789 34.615 0.00 0.00 0.00 1.40
43 44 5.960113 TGGAACGATTTGTGGGATTAAATG 58.040 37.500 0.00 0.00 0.00 2.32
44 45 5.712446 TGGAACGATTTGTGGGATTAAATGA 59.288 36.000 0.00 0.00 0.00 2.57
45 46 6.127758 TGGAACGATTTGTGGGATTAAATGAG 60.128 38.462 0.00 0.00 0.00 2.90
46 47 5.835113 ACGATTTGTGGGATTAAATGAGG 57.165 39.130 0.00 0.00 0.00 3.86
47 48 4.097892 ACGATTTGTGGGATTAAATGAGGC 59.902 41.667 0.00 0.00 0.00 4.70
48 49 4.339247 CGATTTGTGGGATTAAATGAGGCT 59.661 41.667 0.00 0.00 0.00 4.58
49 50 5.530915 CGATTTGTGGGATTAAATGAGGCTA 59.469 40.000 0.00 0.00 0.00 3.93
50 51 6.207417 CGATTTGTGGGATTAAATGAGGCTAT 59.793 38.462 0.00 0.00 0.00 2.97
51 52 7.390440 CGATTTGTGGGATTAAATGAGGCTATA 59.610 37.037 0.00 0.00 0.00 1.31
52 53 9.247861 GATTTGTGGGATTAAATGAGGCTATAT 57.752 33.333 0.00 0.00 0.00 0.86
53 54 8.408043 TTTGTGGGATTAAATGAGGCTATATG 57.592 34.615 0.00 0.00 0.00 1.78
54 55 7.328404 TGTGGGATTAAATGAGGCTATATGA 57.672 36.000 0.00 0.00 0.00 2.15
55 56 7.397221 TGTGGGATTAAATGAGGCTATATGAG 58.603 38.462 0.00 0.00 0.00 2.90
56 57 6.825721 GTGGGATTAAATGAGGCTATATGAGG 59.174 42.308 0.00 0.00 0.00 3.86
57 58 6.069440 TGGGATTAAATGAGGCTATATGAGGG 60.069 42.308 0.00 0.00 0.00 4.30
58 59 5.825151 GGATTAAATGAGGCTATATGAGGGC 59.175 44.000 0.00 0.00 0.00 5.19
59 60 5.841267 TTAAATGAGGCTATATGAGGGCA 57.159 39.130 0.00 0.00 0.00 5.36
60 61 4.942363 AAATGAGGCTATATGAGGGCAT 57.058 40.909 0.00 0.00 38.54 4.40
61 62 7.509236 TTAAATGAGGCTATATGAGGGCATA 57.491 36.000 0.00 0.00 41.00 3.14
62 63 5.365021 AATGAGGCTATATGAGGGCATAC 57.635 43.478 0.00 0.00 39.65 2.39
63 64 3.790126 TGAGGCTATATGAGGGCATACA 58.210 45.455 0.00 0.00 39.65 2.29
64 65 3.515502 TGAGGCTATATGAGGGCATACAC 59.484 47.826 0.00 0.00 39.65 2.90
65 66 2.840651 AGGCTATATGAGGGCATACACC 59.159 50.000 0.00 0.00 39.65 4.16
73 74 3.909662 GGCATACACCCAGCTGTG 58.090 61.111 13.81 7.93 42.05 3.66
79 80 4.720127 CACCCAGCTGTGTATGCA 57.280 55.556 13.81 0.00 0.00 3.96
80 81 3.179925 CACCCAGCTGTGTATGCAT 57.820 52.632 13.81 3.79 0.00 3.96
81 82 0.736636 CACCCAGCTGTGTATGCATG 59.263 55.000 13.81 0.00 0.00 4.06
82 83 0.329261 ACCCAGCTGTGTATGCATGT 59.671 50.000 13.81 0.00 0.00 3.21
83 84 0.736636 CCCAGCTGTGTATGCATGTG 59.263 55.000 13.81 0.00 0.00 3.21
84 85 1.679640 CCCAGCTGTGTATGCATGTGA 60.680 52.381 13.81 0.00 0.00 3.58
85 86 1.399440 CCAGCTGTGTATGCATGTGAC 59.601 52.381 13.81 0.00 0.00 3.67
86 87 2.078392 CAGCTGTGTATGCATGTGACA 58.922 47.619 10.16 2.61 0.00 3.58
87 88 2.681344 CAGCTGTGTATGCATGTGACAT 59.319 45.455 10.16 0.00 0.00 3.06
88 89 3.128068 CAGCTGTGTATGCATGTGACATT 59.872 43.478 10.16 0.00 0.00 2.71
89 90 3.760151 AGCTGTGTATGCATGTGACATTT 59.240 39.130 10.16 0.00 0.00 2.32
90 91 4.943093 AGCTGTGTATGCATGTGACATTTA 59.057 37.500 10.16 0.00 0.00 1.40
91 92 5.415389 AGCTGTGTATGCATGTGACATTTAA 59.585 36.000 10.16 0.00 0.00 1.52
92 93 6.072008 AGCTGTGTATGCATGTGACATTTAAA 60.072 34.615 10.16 0.00 0.00 1.52
93 94 6.033831 GCTGTGTATGCATGTGACATTTAAAC 59.966 38.462 10.16 0.00 0.00 2.01
94 95 6.082984 TGTGTATGCATGTGACATTTAAACG 58.917 36.000 10.16 0.00 0.00 3.60
95 96 5.511377 GTGTATGCATGTGACATTTAAACGG 59.489 40.000 10.16 0.00 0.00 4.44
96 97 3.567576 TGCATGTGACATTTAAACGGG 57.432 42.857 0.00 0.00 0.00 5.28
97 98 3.149981 TGCATGTGACATTTAAACGGGA 58.850 40.909 0.00 0.00 0.00 5.14
98 99 3.057876 TGCATGTGACATTTAAACGGGAC 60.058 43.478 0.00 0.00 0.00 4.46
99 100 3.190535 GCATGTGACATTTAAACGGGACT 59.809 43.478 0.00 0.00 0.00 3.85
100 101 4.393680 GCATGTGACATTTAAACGGGACTA 59.606 41.667 0.00 0.00 0.00 2.59
101 102 5.065988 GCATGTGACATTTAAACGGGACTAT 59.934 40.000 0.00 0.00 0.00 2.12
102 103 6.404293 GCATGTGACATTTAAACGGGACTATT 60.404 38.462 0.00 0.00 0.00 1.73
103 104 7.201661 GCATGTGACATTTAAACGGGACTATTA 60.202 37.037 0.00 0.00 0.00 0.98
104 105 7.599630 TGTGACATTTAAACGGGACTATTAC 57.400 36.000 0.00 0.00 0.00 1.89
105 106 7.388437 TGTGACATTTAAACGGGACTATTACT 58.612 34.615 0.00 0.00 0.00 2.24
106 107 7.546667 TGTGACATTTAAACGGGACTATTACTC 59.453 37.037 0.00 0.00 0.00 2.59
107 108 7.763071 GTGACATTTAAACGGGACTATTACTCT 59.237 37.037 0.00 0.00 0.00 3.24
108 109 7.762615 TGACATTTAAACGGGACTATTACTCTG 59.237 37.037 0.00 0.00 0.00 3.35
109 110 7.046033 ACATTTAAACGGGACTATTACTCTGG 58.954 38.462 0.00 0.00 0.00 3.86
110 111 5.603170 TTAAACGGGACTATTACTCTGGG 57.397 43.478 0.00 0.00 0.00 4.45
111 112 1.411041 ACGGGACTATTACTCTGGGC 58.589 55.000 0.00 0.00 0.00 5.36
112 113 1.063114 ACGGGACTATTACTCTGGGCT 60.063 52.381 0.00 0.00 0.00 5.19
113 114 2.040178 CGGGACTATTACTCTGGGCTT 58.960 52.381 0.00 0.00 0.00 4.35
114 115 2.434702 CGGGACTATTACTCTGGGCTTT 59.565 50.000 0.00 0.00 0.00 3.51
115 116 3.492829 CGGGACTATTACTCTGGGCTTTC 60.493 52.174 0.00 0.00 0.00 2.62
116 117 3.181453 GGGACTATTACTCTGGGCTTTCC 60.181 52.174 0.00 0.00 0.00 3.13
117 118 3.712218 GGACTATTACTCTGGGCTTTCCT 59.288 47.826 0.00 0.00 36.20 3.36
118 119 4.443598 GGACTATTACTCTGGGCTTTCCTG 60.444 50.000 0.00 0.00 36.20 3.86
119 120 4.362677 ACTATTACTCTGGGCTTTCCTGA 58.637 43.478 0.00 0.00 40.57 3.86
120 121 3.636153 ATTACTCTGGGCTTTCCTGAC 57.364 47.619 0.00 0.00 38.38 3.51
121 122 2.327325 TACTCTGGGCTTTCCTGACT 57.673 50.000 0.00 0.00 38.38 3.41
122 123 2.327325 ACTCTGGGCTTTCCTGACTA 57.673 50.000 0.00 0.00 38.38 2.59
123 124 2.839228 ACTCTGGGCTTTCCTGACTAT 58.161 47.619 0.00 0.00 38.38 2.12
124 125 3.995636 ACTCTGGGCTTTCCTGACTATA 58.004 45.455 0.00 0.00 38.38 1.31
125 126 3.964031 ACTCTGGGCTTTCCTGACTATAG 59.036 47.826 0.00 0.00 38.38 1.31
126 127 4.219115 CTCTGGGCTTTCCTGACTATAGA 58.781 47.826 6.78 0.00 38.38 1.98
127 128 4.820775 TCTGGGCTTTCCTGACTATAGAT 58.179 43.478 6.78 0.00 38.38 1.98
128 129 5.965486 TCTGGGCTTTCCTGACTATAGATA 58.035 41.667 6.78 0.00 38.38 1.98
129 130 6.013379 TCTGGGCTTTCCTGACTATAGATAG 58.987 44.000 6.78 4.05 38.38 2.08
130 131 5.087323 TGGGCTTTCCTGACTATAGATAGG 58.913 45.833 6.78 12.84 33.94 2.57
131 132 5.162870 TGGGCTTTCCTGACTATAGATAGGA 60.163 44.000 19.19 19.19 37.55 2.94
132 133 5.780793 GGGCTTTCCTGACTATAGATAGGAA 59.219 44.000 25.23 25.23 45.04 3.36
139 140 8.410673 TCCTGACTATAGATAGGAAATCACAC 57.589 38.462 20.19 0.00 36.44 3.82
140 141 7.175119 TCCTGACTATAGATAGGAAATCACACG 59.825 40.741 20.19 0.00 36.44 4.49
141 142 6.678878 TGACTATAGATAGGAAATCACACGC 58.321 40.000 6.78 0.00 34.69 5.34
142 143 6.490381 TGACTATAGATAGGAAATCACACGCT 59.510 38.462 6.78 0.00 34.69 5.07
143 144 7.664318 TGACTATAGATAGGAAATCACACGCTA 59.336 37.037 6.78 0.00 34.69 4.26
144 145 8.405418 ACTATAGATAGGAAATCACACGCTAA 57.595 34.615 6.78 0.00 34.69 3.09
145 146 9.026121 ACTATAGATAGGAAATCACACGCTAAT 57.974 33.333 6.78 0.00 34.69 1.73
146 147 9.862371 CTATAGATAGGAAATCACACGCTAATT 57.138 33.333 0.00 0.00 0.00 1.40
148 149 7.251704 AGATAGGAAATCACACGCTAATTTG 57.748 36.000 0.00 0.00 0.00 2.32
149 150 4.096732 AGGAAATCACACGCTAATTTGC 57.903 40.909 1.42 1.42 32.74 3.68
162 163 4.798574 GCTAATTTGCGGGATCAAATAGG 58.201 43.478 0.00 1.37 43.56 2.57
163 164 4.518970 GCTAATTTGCGGGATCAAATAGGA 59.481 41.667 0.00 0.00 43.56 2.94
164 165 4.918810 AATTTGCGGGATCAAATAGGAC 57.081 40.909 0.00 0.00 43.56 3.85
165 166 3.358111 TTTGCGGGATCAAATAGGACA 57.642 42.857 0.00 0.00 31.64 4.02
166 167 3.576078 TTGCGGGATCAAATAGGACAT 57.424 42.857 0.00 0.00 0.00 3.06
167 168 2.849942 TGCGGGATCAAATAGGACATG 58.150 47.619 0.00 0.00 0.00 3.21
168 169 2.437651 TGCGGGATCAAATAGGACATGA 59.562 45.455 0.00 0.00 0.00 3.07
169 170 3.070018 GCGGGATCAAATAGGACATGAG 58.930 50.000 0.00 0.00 0.00 2.90
170 171 3.244215 GCGGGATCAAATAGGACATGAGA 60.244 47.826 0.00 0.00 0.00 3.27
171 172 4.564041 CGGGATCAAATAGGACATGAGAG 58.436 47.826 0.00 0.00 0.00 3.20
172 173 4.562347 CGGGATCAAATAGGACATGAGAGG 60.562 50.000 0.00 0.00 0.00 3.69
173 174 4.594920 GGGATCAAATAGGACATGAGAGGA 59.405 45.833 0.00 0.00 0.00 3.71
174 175 5.072329 GGGATCAAATAGGACATGAGAGGAA 59.928 44.000 0.00 0.00 0.00 3.36
177 178 5.280499 TCAAATAGGACATGAGAGGAAGGA 58.720 41.667 0.00 0.00 0.00 3.36
190 192 6.586344 TGAGAGGAAGGACTATGCTAATTTG 58.414 40.000 0.00 0.00 0.00 2.32
198 200 4.520492 GGACTATGCTAATTTGTGGGATGG 59.480 45.833 0.00 0.00 0.00 3.51
203 205 3.518705 TGCTAATTTGTGGGATGGCAAAT 59.481 39.130 0.00 0.00 44.29 2.32
218 220 6.870439 GGATGGCAAATAATAATCTGAAAGGC 59.130 38.462 0.00 0.00 0.00 4.35
284 286 6.111669 ACCTTAGGTCTCAAAAGGAACTAC 57.888 41.667 0.00 0.00 42.01 2.73
285 287 5.845065 ACCTTAGGTCTCAAAAGGAACTACT 59.155 40.000 0.00 0.00 42.01 2.57
286 288 7.015064 ACCTTAGGTCTCAAAAGGAACTACTA 58.985 38.462 0.00 0.00 42.01 1.82
321 323 7.337689 TGAAGCTATTTTCAGATAGTGCATTGT 59.662 33.333 0.00 0.00 32.39 2.71
332 334 2.903798 AGTGCATTGTTTTTGGTGTGG 58.096 42.857 0.00 0.00 0.00 4.17
347 349 5.055265 TGGTGTGGTAAATTTCTTCCAGA 57.945 39.130 0.00 0.00 0.00 3.86
357 359 5.567138 AATTTCTTCCAGAGCCGTAAATG 57.433 39.130 0.00 0.00 0.00 2.32
362 364 5.553123 TCTTCCAGAGCCGTAAATGTTAAA 58.447 37.500 0.00 0.00 0.00 1.52
371 373 5.068987 AGCCGTAAATGTTAAATGCATGGAT 59.931 36.000 0.00 0.00 0.00 3.41
397 399 8.556213 TGAATTATTTGTCTACCAACACCTAC 57.444 34.615 0.00 0.00 31.20 3.18
398 400 8.380099 TGAATTATTTGTCTACCAACACCTACT 58.620 33.333 0.00 0.00 31.20 2.57
399 401 9.880157 GAATTATTTGTCTACCAACACCTACTA 57.120 33.333 0.00 0.00 31.20 1.82
412 414 9.456459 ACCAACACCTACTATAATATTAACCCT 57.544 33.333 0.00 0.00 0.00 4.34
413 415 9.720769 CCAACACCTACTATAATATTAACCCTG 57.279 37.037 0.00 0.00 0.00 4.45
415 417 8.500667 ACACCTACTATAATATTAACCCTGCA 57.499 34.615 0.00 0.00 0.00 4.41
420 425 6.707290 ACTATAATATTAACCCTGCATGCGA 58.293 36.000 14.09 1.21 0.00 5.10
422 427 1.961793 TATTAACCCTGCATGCGACC 58.038 50.000 14.09 0.00 0.00 4.79
458 463 2.840651 CCCTCACATGGTCTCCTTTAGT 59.159 50.000 0.00 0.00 0.00 2.24
467 472 0.963962 TCTCCTTTAGTCGCAACGGT 59.036 50.000 0.00 0.00 0.00 4.83
514 519 2.642254 GCTGCTTGGCTTGCCATCA 61.642 57.895 15.58 14.38 0.00 3.07
520 525 0.178967 TTGGCTTGCCATCAGGTGAA 60.179 50.000 15.58 0.00 37.19 3.18
549 554 0.105964 TGGTGTTGGAGGAACGTCAG 59.894 55.000 0.00 0.00 37.38 3.51
556 561 3.081710 TGGAGGAACGTCAGACTATCA 57.918 47.619 0.00 0.00 0.00 2.15
558 563 3.632604 TGGAGGAACGTCAGACTATCATC 59.367 47.826 0.00 4.06 0.00 2.92
565 573 3.181482 ACGTCAGACTATCATCCAGCAAG 60.181 47.826 0.00 0.00 0.00 4.01
603 611 2.507471 GAGTCCCATCTCCAAGAACCAT 59.493 50.000 0.00 0.00 0.00 3.55
610 618 4.337555 CCATCTCCAAGAACCATGTTGATC 59.662 45.833 0.00 0.00 31.69 2.92
612 620 4.326826 TCTCCAAGAACCATGTTGATCAC 58.673 43.478 0.00 0.00 31.69 3.06
619 627 3.492421 ACCATGTTGATCACGCATTTC 57.508 42.857 8.71 0.00 0.00 2.17
656 664 5.710984 TCTTCTTCTACGATCCAGTTTGTC 58.289 41.667 0.00 0.00 0.00 3.18
676 684 2.158813 TCACTCGGGCAATCCTAATTCC 60.159 50.000 0.00 0.00 0.00 3.01
705 713 7.070074 ACAGCTAGCATTTACTTACTCCATAGT 59.930 37.037 18.83 0.00 39.91 2.12
710 718 7.056635 AGCATTTACTTACTCCATAGTGCAAT 58.943 34.615 0.00 0.00 36.36 3.56
718 729 3.879295 ACTCCATAGTGCAATATGTGTGC 59.121 43.478 27.12 0.00 42.55 4.57
731 742 8.303156 TGCAATATGTGTGCTTTAACATAGTTT 58.697 29.630 0.00 0.00 41.31 2.66
803 814 7.661968 CATATGTGCTAGTAGTGTTCCTATGT 58.338 38.462 0.00 0.00 0.00 2.29
804 815 5.324784 TGTGCTAGTAGTGTTCCTATGTG 57.675 43.478 0.00 0.00 0.00 3.21
805 816 4.113354 GTGCTAGTAGTGTTCCTATGTGC 58.887 47.826 0.00 0.00 0.00 4.57
806 817 3.181490 TGCTAGTAGTGTTCCTATGTGCG 60.181 47.826 0.00 0.00 0.00 5.34
807 818 2.961526 AGTAGTGTTCCTATGTGCGG 57.038 50.000 0.00 0.00 0.00 5.69
808 819 2.453521 AGTAGTGTTCCTATGTGCGGA 58.546 47.619 0.00 0.00 0.00 5.54
809 820 2.427453 AGTAGTGTTCCTATGTGCGGAG 59.573 50.000 0.00 0.00 0.00 4.63
823 834 3.139029 CGGAGCCTTAGTGTTGTCC 57.861 57.895 0.00 0.00 0.00 4.02
824 835 0.320374 CGGAGCCTTAGTGTTGTCCA 59.680 55.000 0.00 0.00 0.00 4.02
825 836 1.809684 GGAGCCTTAGTGTTGTCCAC 58.190 55.000 0.00 0.00 44.89 4.02
832 843 3.637714 GTGTTGTCCACGCACGAT 58.362 55.556 0.00 0.00 35.77 3.73
833 844 1.491563 GTGTTGTCCACGCACGATC 59.508 57.895 0.00 0.00 35.77 3.69
834 845 1.068250 TGTTGTCCACGCACGATCA 59.932 52.632 0.00 0.00 0.00 2.92
835 846 0.530870 TGTTGTCCACGCACGATCAA 60.531 50.000 0.00 0.00 0.00 2.57
836 847 0.110823 GTTGTCCACGCACGATCAAC 60.111 55.000 0.00 3.38 0.00 3.18
837 848 0.530870 TTGTCCACGCACGATCAACA 60.531 50.000 0.00 0.00 0.00 3.33
838 849 0.943835 TGTCCACGCACGATCAACAG 60.944 55.000 0.00 0.00 0.00 3.16
839 850 0.944311 GTCCACGCACGATCAACAGT 60.944 55.000 0.00 0.00 0.00 3.55
840 851 0.599060 TCCACGCACGATCAACAGTA 59.401 50.000 0.00 0.00 0.00 2.74
841 852 1.203758 TCCACGCACGATCAACAGTAT 59.796 47.619 0.00 0.00 0.00 2.12
842 853 1.588404 CCACGCACGATCAACAGTATC 59.412 52.381 0.00 0.00 0.00 2.24
843 854 2.530177 CACGCACGATCAACAGTATCT 58.470 47.619 0.00 0.00 0.00 1.98
844 855 2.531912 CACGCACGATCAACAGTATCTC 59.468 50.000 0.00 0.00 0.00 2.75
845 856 2.423892 ACGCACGATCAACAGTATCTCT 59.576 45.455 0.00 0.00 0.00 3.10
846 857 3.626217 ACGCACGATCAACAGTATCTCTA 59.374 43.478 0.00 0.00 0.00 2.43
847 858 4.095932 ACGCACGATCAACAGTATCTCTAA 59.904 41.667 0.00 0.00 0.00 2.10
848 859 5.034797 CGCACGATCAACAGTATCTCTAAA 58.965 41.667 0.00 0.00 0.00 1.85
849 860 5.052304 CGCACGATCAACAGTATCTCTAAAC 60.052 44.000 0.00 0.00 0.00 2.01
850 861 6.037098 GCACGATCAACAGTATCTCTAAACT 58.963 40.000 0.00 0.00 0.00 2.66
851 862 6.020281 GCACGATCAACAGTATCTCTAAACTG 60.020 42.308 0.00 1.10 46.84 3.16
852 863 6.473778 CACGATCAACAGTATCTCTAAACTGG 59.526 42.308 7.33 0.00 45.94 4.00
853 864 5.980116 CGATCAACAGTATCTCTAAACTGGG 59.020 44.000 7.33 0.02 45.94 4.45
854 865 6.405953 CGATCAACAGTATCTCTAAACTGGGT 60.406 42.308 7.33 0.00 45.94 4.51
855 866 7.201794 CGATCAACAGTATCTCTAAACTGGGTA 60.202 40.741 7.33 0.00 45.94 3.69
856 867 7.973048 TCAACAGTATCTCTAAACTGGGTAT 57.027 36.000 7.33 0.00 45.94 2.73
857 868 7.782049 TCAACAGTATCTCTAAACTGGGTATG 58.218 38.462 7.33 1.89 45.94 2.39
858 869 6.163135 ACAGTATCTCTAAACTGGGTATGC 57.837 41.667 7.33 0.00 45.94 3.14
859 870 5.900123 ACAGTATCTCTAAACTGGGTATGCT 59.100 40.000 7.33 0.00 45.94 3.79
860 871 6.183360 ACAGTATCTCTAAACTGGGTATGCTG 60.183 42.308 7.33 0.00 45.94 4.41
861 872 5.900123 AGTATCTCTAAACTGGGTATGCTGT 59.100 40.000 0.00 0.00 0.00 4.40
862 873 4.737855 TCTCTAAACTGGGTATGCTGTC 57.262 45.455 0.00 0.00 0.00 3.51
863 874 3.130516 TCTCTAAACTGGGTATGCTGTCG 59.869 47.826 0.00 0.00 0.00 4.35
864 875 2.829720 TCTAAACTGGGTATGCTGTCGT 59.170 45.455 0.00 0.00 0.00 4.34
865 876 2.094762 AAACTGGGTATGCTGTCGTC 57.905 50.000 0.00 0.00 0.00 4.20
866 877 0.973632 AACTGGGTATGCTGTCGTCA 59.026 50.000 0.00 0.00 0.00 4.35
867 878 0.246635 ACTGGGTATGCTGTCGTCAC 59.753 55.000 0.00 0.00 0.00 3.67
868 879 0.532573 CTGGGTATGCTGTCGTCACT 59.467 55.000 0.00 0.00 0.00 3.41
869 880 0.530744 TGGGTATGCTGTCGTCACTC 59.469 55.000 0.00 0.00 0.00 3.51
870 881 0.530744 GGGTATGCTGTCGTCACTCA 59.469 55.000 0.00 0.00 0.00 3.41
871 882 1.469940 GGGTATGCTGTCGTCACTCAG 60.470 57.143 0.00 0.00 35.12 3.35
875 886 4.567435 CTGTCGTCACTCAGCCTG 57.433 61.111 0.00 0.00 0.00 4.85
876 887 1.735920 CTGTCGTCACTCAGCCTGC 60.736 63.158 0.00 0.00 0.00 4.85
877 888 2.807045 GTCGTCACTCAGCCTGCG 60.807 66.667 0.00 0.00 0.00 5.18
878 889 4.056125 TCGTCACTCAGCCTGCGG 62.056 66.667 0.00 0.00 0.00 5.69
879 890 4.363990 CGTCACTCAGCCTGCGGT 62.364 66.667 0.00 0.00 0.00 5.68
880 891 2.433318 GTCACTCAGCCTGCGGTC 60.433 66.667 0.00 0.00 0.00 4.79
898 909 2.370445 CCGCTCTCCCTCCCAATGT 61.370 63.158 0.00 0.00 0.00 2.71
900 911 1.617018 CGCTCTCCCTCCCAATGTGA 61.617 60.000 0.00 0.00 0.00 3.58
910 921 4.384056 CCTCCCAATGTGATGTGATCTAC 58.616 47.826 0.00 0.00 0.00 2.59
912 923 5.397221 CCTCCCAATGTGATGTGATCTACTT 60.397 44.000 0.00 0.00 0.00 2.24
914 925 6.115446 TCCCAATGTGATGTGATCTACTTTC 58.885 40.000 0.00 0.00 0.00 2.62
916 927 6.259608 CCCAATGTGATGTGATCTACTTTCTC 59.740 42.308 0.00 0.00 0.00 2.87
917 928 6.259608 CCAATGTGATGTGATCTACTTTCTCC 59.740 42.308 0.00 0.00 0.00 3.71
919 930 6.611613 TGTGATGTGATCTACTTTCTCCTT 57.388 37.500 0.00 0.00 0.00 3.36
922 934 7.604164 TGTGATGTGATCTACTTTCTCCTTTTC 59.396 37.037 0.00 0.00 0.00 2.29
951 963 9.474313 TTTTGGCAAATGTAGGAATCTATTACT 57.526 29.630 14.29 0.00 34.69 2.24
952 964 9.474313 TTTGGCAAATGTAGGAATCTATTACTT 57.526 29.630 8.93 0.00 32.11 2.24
953 965 9.474313 TTGGCAAATGTAGGAATCTATTACTTT 57.526 29.630 0.00 0.00 32.11 2.66
955 967 9.736023 GGCAAATGTAGGAATCTATTACTTTTG 57.264 33.333 16.71 16.71 41.02 2.44
957 969 9.438291 CAAATGTAGGAATCTATTACTTTTGCG 57.562 33.333 12.85 0.00 36.52 4.85
958 970 8.958119 AATGTAGGAATCTATTACTTTTGCGA 57.042 30.769 0.00 0.00 32.11 5.10
959 971 8.958119 ATGTAGGAATCTATTACTTTTGCGAA 57.042 30.769 0.00 0.00 32.11 4.70
961 973 6.345920 AGGAATCTATTACTTTTGCGAACG 57.654 37.500 0.00 0.00 0.00 3.95
962 974 6.103997 AGGAATCTATTACTTTTGCGAACGA 58.896 36.000 0.00 0.00 0.00 3.85
965 977 7.215755 GGAATCTATTACTTTTGCGAACGAAAC 59.784 37.037 0.00 0.00 0.00 2.78
968 980 2.468532 ACTTTTGCGAACGAAACCAG 57.531 45.000 0.00 0.00 0.00 4.00
969 981 1.120437 CTTTTGCGAACGAAACCAGC 58.880 50.000 0.00 0.00 0.00 4.85
971 983 0.028770 TTTGCGAACGAAACCAGCAG 59.971 50.000 0.00 0.00 39.11 4.24
972 984 1.092921 TTGCGAACGAAACCAGCAGT 61.093 50.000 0.00 0.00 39.11 4.40
973 985 0.249531 TGCGAACGAAACCAGCAGTA 60.250 50.000 0.00 0.00 33.57 2.74
976 991 2.028883 GCGAACGAAACCAGCAGTATAC 59.971 50.000 0.00 0.00 0.00 1.47
1020 1035 9.398921 AGGGATCTATTTATACCCATCATATCC 57.601 37.037 0.00 0.00 42.62 2.59
1022 1037 8.606830 GGATCTATTTATACCCATCATATCCCC 58.393 40.741 0.00 0.00 0.00 4.81
1068 1083 1.671901 CTCCTCTGCTTCCCGTCCTC 61.672 65.000 0.00 0.00 0.00 3.71
1069 1084 1.684049 CCTCTGCTTCCCGTCCTCT 60.684 63.158 0.00 0.00 0.00 3.69
1077 1093 2.234168 GCTTCCCGTCCTCTATATTCCC 59.766 54.545 0.00 0.00 0.00 3.97
1097 1113 0.602905 AATATAGAAGTGCCGCCGCC 60.603 55.000 0.00 0.00 0.00 6.13
1107 1123 2.203139 CCGCCGCCACCATTATCA 60.203 61.111 0.00 0.00 0.00 2.15
1115 1131 1.532868 GCCACCATTATCAGCGATCAC 59.467 52.381 0.00 0.00 0.00 3.06
1150 1174 4.021916 GTCTTGTGTAGTAGAGGGCCTAA 58.978 47.826 5.73 0.00 0.00 2.69
1165 1189 1.882912 CCTAAAGTGACACTGCAGCA 58.117 50.000 15.27 0.06 0.00 4.41
1219 1243 1.442769 CCAAGTCATCGTGGTTCCAG 58.557 55.000 0.00 0.00 38.18 3.86
1298 1322 0.401738 CCAAGGCTGGGAAGAGAACA 59.598 55.000 0.00 0.00 39.30 3.18
1299 1323 1.202927 CCAAGGCTGGGAAGAGAACAA 60.203 52.381 0.00 0.00 39.30 2.83
1504 1534 4.296265 GGAACCGCCGTTGATTCT 57.704 55.556 0.00 0.00 30.30 2.40
1511 1541 3.985877 CCGTTGATTCTGGCAGCA 58.014 55.556 10.34 0.00 0.00 4.41
1514 1544 1.303799 CGTTGATTCTGGCAGCAGCT 61.304 55.000 10.34 0.00 41.70 4.24
1527 1557 2.404995 GCAGCTGGTCCATGAGCAC 61.405 63.158 17.12 0.00 37.70 4.40
1586 1616 4.519437 CGAGCGCTGATGCCAGGA 62.519 66.667 18.48 0.00 40.72 3.86
1598 1628 1.610673 GCCAGGACTGAGAGGTGGA 60.611 63.158 0.00 0.00 0.00 4.02
1600 1630 1.612395 CCAGGACTGAGAGGTGGAGC 61.612 65.000 0.00 0.00 0.00 4.70
1657 1687 1.817099 GCTCCTTGTGGATCCAGCG 60.817 63.158 16.81 6.28 42.29 5.18
1660 1690 2.270205 CTTGTGGATCCAGCGGCT 59.730 61.111 16.81 0.00 0.00 5.52
1706 1736 3.766691 GCACGAGGGCCTCCGTTA 61.767 66.667 27.36 0.00 36.83 3.18
1707 1737 2.494918 CACGAGGGCCTCCGTTAG 59.505 66.667 27.36 15.31 36.83 2.34
1865 1895 4.318546 GCCGTGATTAATTAAGGTAGCACG 60.319 45.833 15.29 15.29 45.03 5.34
1866 1896 4.318546 CCGTGATTAATTAAGGTAGCACGC 60.319 45.833 16.33 3.88 44.36 5.34
1896 1926 0.109597 CGCTTGCTTTGCCGATTTCT 60.110 50.000 0.00 0.00 0.00 2.52
1898 1928 1.336240 GCTTGCTTTGCCGATTTCTGT 60.336 47.619 0.00 0.00 0.00 3.41
1907 1937 2.159099 TGCCGATTTCTGTAGCTAGGTG 60.159 50.000 4.27 0.00 0.00 4.00
1912 1942 3.762407 TTTCTGTAGCTAGGTGTTGCA 57.238 42.857 4.27 0.00 0.00 4.08
1925 1955 0.597118 TGTTGCATTGAAGCGCCAAC 60.597 50.000 2.29 10.18 37.31 3.77
2039 2086 3.973267 GAGCCTGCAGTCCGTCGTC 62.973 68.421 13.81 0.00 0.00 4.20
2051 2098 0.795735 CCGTCGTCGCATCGTTTACT 60.796 55.000 0.00 0.00 35.54 2.24
2076 2123 2.514129 GAGAGCTCTCCATGCCTCA 58.486 57.895 30.10 0.00 37.02 3.86
2077 2124 0.390124 GAGAGCTCTCCATGCCTCAG 59.610 60.000 30.10 0.00 37.02 3.35
2078 2125 1.227615 GAGCTCTCCATGCCTCAGC 60.228 63.158 6.43 0.00 40.48 4.26
2079 2126 2.588314 GCTCTCCATGCCTCAGCG 60.588 66.667 0.00 0.00 44.31 5.18
2080 2127 2.108566 CTCTCCATGCCTCAGCGG 59.891 66.667 0.00 0.00 44.31 5.52
2081 2128 3.457625 CTCTCCATGCCTCAGCGGG 62.458 68.421 0.00 0.00 44.31 6.13
2082 2129 3.473647 CTCCATGCCTCAGCGGGA 61.474 66.667 0.00 0.00 44.31 5.14
2104 2151 8.355272 GGGACGTTATTTTGTTGTTATTTTGT 57.645 30.769 0.00 0.00 0.00 2.83
2129 2176 2.017049 AGTGTTTTCTTGTTGCTCGCT 58.983 42.857 0.00 0.00 0.00 4.93
2148 2195 6.534475 TCGCTTGGTTAATAGAACTTCCTA 57.466 37.500 0.00 0.00 0.00 2.94
2225 2272 1.613925 GACTATCGGGCATCAGTAGCA 59.386 52.381 0.00 0.00 0.00 3.49
2266 2313 3.123621 CGAAGGTTGATGAGTTCTTTCGG 59.876 47.826 0.00 0.00 0.00 4.30
2267 2314 2.427506 AGGTTGATGAGTTCTTTCGGC 58.572 47.619 0.00 0.00 0.00 5.54
2268 2315 2.039084 AGGTTGATGAGTTCTTTCGGCT 59.961 45.455 0.00 0.00 0.00 5.52
2269 2316 3.260884 AGGTTGATGAGTTCTTTCGGCTA 59.739 43.478 0.00 0.00 0.00 3.93
2270 2317 3.619038 GGTTGATGAGTTCTTTCGGCTAG 59.381 47.826 0.00 0.00 0.00 3.42
2273 2320 1.267121 TGAGTTCTTTCGGCTAGGCT 58.733 50.000 15.11 0.00 0.00 4.58
2285 2332 1.343465 GGCTAGGCTAGGCGTTGATAA 59.657 52.381 29.17 0.00 41.69 1.75
2290 2337 3.467803 AGGCTAGGCGTTGATAAATCAC 58.532 45.455 11.10 0.00 36.36 3.06
2292 2339 4.344102 AGGCTAGGCGTTGATAAATCACTA 59.656 41.667 11.10 0.00 36.36 2.74
2295 2342 5.389935 GCTAGGCGTTGATAAATCACTATGC 60.390 44.000 0.00 0.00 36.36 3.14
2298 2345 3.460357 CGTTGATAAATCACTATGCGCG 58.540 45.455 0.00 0.00 36.36 6.86
2318 2365 2.475111 CGTGATGTAAACGAGTGTGCTT 59.525 45.455 0.00 0.00 43.68 3.91
2319 2366 3.671459 CGTGATGTAAACGAGTGTGCTTA 59.329 43.478 0.00 0.00 43.68 3.09
2338 2385 7.681903 GTGCTTATACTATTGCACGTTTTAGT 58.318 34.615 0.00 0.00 44.60 2.24
2368 2415 0.706433 AGGAATCAAGGGTGTGGCAT 59.294 50.000 0.00 0.00 0.00 4.40
2377 2425 0.755327 GGGTGTGGCATGATAACCCC 60.755 60.000 12.85 5.10 44.05 4.95
2383 2431 1.858910 TGGCATGATAACCCCCTGATT 59.141 47.619 0.00 0.00 0.00 2.57
2387 2435 3.437052 GCATGATAACCCCCTGATTTCCT 60.437 47.826 0.00 0.00 0.00 3.36
2397 2445 2.104792 CCCTGATTTCCTGATTCCGCTA 59.895 50.000 0.00 0.00 0.00 4.26
2398 2446 3.397482 CCTGATTTCCTGATTCCGCTAG 58.603 50.000 0.00 0.00 0.00 3.42
2406 2455 4.189231 TCCTGATTCCGCTAGTTTAAAGC 58.811 43.478 0.00 0.00 36.60 3.51
2409 2458 5.484173 TGATTCCGCTAGTTTAAAGCATG 57.516 39.130 0.00 0.00 40.08 4.06
2412 2461 3.932822 TCCGCTAGTTTAAAGCATGTGA 58.067 40.909 0.00 0.00 40.08 3.58
2415 2464 5.030295 CCGCTAGTTTAAAGCATGTGATTG 58.970 41.667 0.00 0.00 40.08 2.67
2419 2468 7.426456 CGCTAGTTTAAAGCATGTGATTGTTAG 59.574 37.037 0.00 0.00 40.08 2.34
2509 2558 5.412594 CCAACAGGGAAATATCGATGTATGG 59.587 44.000 8.54 3.77 40.01 2.74
2510 2559 6.230472 CAACAGGGAAATATCGATGTATGGA 58.770 40.000 8.54 0.00 0.00 3.41
2511 2560 6.042638 ACAGGGAAATATCGATGTATGGAG 57.957 41.667 8.54 0.00 0.00 3.86
2512 2561 4.872691 CAGGGAAATATCGATGTATGGAGC 59.127 45.833 8.54 0.00 0.00 4.70
2525 2576 8.027189 TCGATGTATGGAGCATATAACTAACAC 58.973 37.037 0.00 0.00 0.00 3.32
2526 2577 7.812669 CGATGTATGGAGCATATAACTAACACA 59.187 37.037 0.00 0.00 0.00 3.72
2527 2578 8.833231 ATGTATGGAGCATATAACTAACACAC 57.167 34.615 0.00 0.00 0.00 3.82
2536 2590 9.144298 AGCATATAACTAACACACTATACCACT 57.856 33.333 0.00 0.00 0.00 4.00
2554 2608 3.243068 CCACTCCTTTGAAGTTTGAACCG 60.243 47.826 0.00 0.00 0.00 4.44
2586 2641 6.414408 TGTTTCATTTTTGTTTTGTCGCAT 57.586 29.167 0.00 0.00 0.00 4.73
2589 2644 4.686972 TCATTTTTGTTTTGTCGCATGGA 58.313 34.783 0.00 0.00 0.00 3.41
2599 2654 1.478916 TGTCGCATGGAAGACCGATAA 59.521 47.619 0.00 0.00 39.42 1.75
2619 2674 7.747799 CCGATAATACATTCTGCTGCTAAATTG 59.252 37.037 0.00 0.00 0.00 2.32
2658 2714 5.982890 CCAATGTTGGGTTCTAGAAACAT 57.017 39.130 21.77 16.74 44.70 2.71
2674 2732 8.481314 TCTAGAAACATATGAGAAAGCAGACAT 58.519 33.333 10.38 0.00 0.00 3.06
2691 2749 5.163913 GCAGACATGAAATAGACACACACTC 60.164 44.000 0.00 0.00 0.00 3.51
2701 2759 3.717707 AGACACACACTCACACACATAC 58.282 45.455 0.00 0.00 0.00 2.39
2704 2762 5.010617 AGACACACACTCACACACATACATA 59.989 40.000 0.00 0.00 0.00 2.29
2788 2847 9.423964 TGTGTAACCTACCTATGATTATACACA 57.576 33.333 9.99 9.99 44.68 3.72
2830 2889 5.581975 AGAGTAACCTAGCTCTGTTTACCT 58.418 41.667 6.15 1.73 40.24 3.08
2837 2896 4.081642 CCTAGCTCTGTTTACCTGTAAGCA 60.082 45.833 6.45 6.45 35.49 3.91
2888 2947 1.134560 GCCCGATATCGACATACTCCC 59.865 57.143 26.32 0.36 43.02 4.30
2891 2950 2.683867 CCGATATCGACATACTCCCTCC 59.316 54.545 26.32 0.00 43.02 4.30
2907 2966 4.895836 TCCCTCCATCCACATATATAGGG 58.104 47.826 6.61 6.61 43.23 3.53
2913 2972 5.905331 TCCATCCACATATATAGGGCCTAAG 59.095 44.000 18.91 7.94 0.00 2.18
2914 2973 5.667626 CCATCCACATATATAGGGCCTAAGT 59.332 44.000 18.91 11.60 0.00 2.24
2951 3042 8.277918 AGAAGAAGAGAATTGGCCAGTTTATAT 58.722 33.333 15.45 1.83 0.00 0.86
2952 3043 7.814264 AGAAGAGAATTGGCCAGTTTATATG 57.186 36.000 15.45 0.00 0.00 1.78
2953 3044 6.774656 AGAAGAGAATTGGCCAGTTTATATGG 59.225 38.462 15.45 0.00 41.04 2.74
2954 3045 6.266131 AGAGAATTGGCCAGTTTATATGGA 57.734 37.500 15.45 0.00 40.51 3.41
2955 3046 6.672593 AGAGAATTGGCCAGTTTATATGGAA 58.327 36.000 15.45 0.00 40.51 3.53
2956 3047 7.125391 AGAGAATTGGCCAGTTTATATGGAAA 58.875 34.615 15.45 0.00 40.51 3.13
2957 3048 7.619302 AGAGAATTGGCCAGTTTATATGGAAAA 59.381 33.333 15.45 0.00 40.51 2.29
2958 3049 7.555965 AGAATTGGCCAGTTTATATGGAAAAC 58.444 34.615 15.45 0.00 40.51 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.194116 CCAACTAATATCCATGCATGCCC 59.806 47.826 21.69 0.00 0.00 5.36
1 2 4.081406 TCCAACTAATATCCATGCATGCC 58.919 43.478 21.69 0.00 0.00 4.40
2 3 5.464168 GTTCCAACTAATATCCATGCATGC 58.536 41.667 21.69 11.82 0.00 4.06
3 4 5.469760 TCGTTCCAACTAATATCCATGCATG 59.530 40.000 20.19 20.19 0.00 4.06
4 5 5.620206 TCGTTCCAACTAATATCCATGCAT 58.380 37.500 0.00 0.00 0.00 3.96
5 6 5.029807 TCGTTCCAACTAATATCCATGCA 57.970 39.130 0.00 0.00 0.00 3.96
6 7 6.560253 AATCGTTCCAACTAATATCCATGC 57.440 37.500 0.00 0.00 0.00 4.06
7 8 7.857389 CACAAATCGTTCCAACTAATATCCATG 59.143 37.037 0.00 0.00 0.00 3.66
8 9 7.013274 CCACAAATCGTTCCAACTAATATCCAT 59.987 37.037 0.00 0.00 0.00 3.41
9 10 6.317642 CCACAAATCGTTCCAACTAATATCCA 59.682 38.462 0.00 0.00 0.00 3.41
10 11 6.238648 CCCACAAATCGTTCCAACTAATATCC 60.239 42.308 0.00 0.00 0.00 2.59
11 12 6.540914 TCCCACAAATCGTTCCAACTAATATC 59.459 38.462 0.00 0.00 0.00 1.63
12 13 6.419791 TCCCACAAATCGTTCCAACTAATAT 58.580 36.000 0.00 0.00 0.00 1.28
13 14 5.806818 TCCCACAAATCGTTCCAACTAATA 58.193 37.500 0.00 0.00 0.00 0.98
14 15 4.658063 TCCCACAAATCGTTCCAACTAAT 58.342 39.130 0.00 0.00 0.00 1.73
15 16 4.088056 TCCCACAAATCGTTCCAACTAA 57.912 40.909 0.00 0.00 0.00 2.24
16 17 3.773418 TCCCACAAATCGTTCCAACTA 57.227 42.857 0.00 0.00 0.00 2.24
17 18 2.649531 TCCCACAAATCGTTCCAACT 57.350 45.000 0.00 0.00 0.00 3.16
18 19 3.934457 AATCCCACAAATCGTTCCAAC 57.066 42.857 0.00 0.00 0.00 3.77
19 20 6.209589 TCATTTAATCCCACAAATCGTTCCAA 59.790 34.615 0.00 0.00 0.00 3.53
20 21 5.712446 TCATTTAATCCCACAAATCGTTCCA 59.288 36.000 0.00 0.00 0.00 3.53
21 22 6.202516 TCATTTAATCCCACAAATCGTTCC 57.797 37.500 0.00 0.00 0.00 3.62
22 23 6.265577 CCTCATTTAATCCCACAAATCGTTC 58.734 40.000 0.00 0.00 0.00 3.95
23 24 5.394115 GCCTCATTTAATCCCACAAATCGTT 60.394 40.000 0.00 0.00 0.00 3.85
24 25 4.097892 GCCTCATTTAATCCCACAAATCGT 59.902 41.667 0.00 0.00 0.00 3.73
25 26 4.339247 AGCCTCATTTAATCCCACAAATCG 59.661 41.667 0.00 0.00 0.00 3.34
26 27 5.859205 AGCCTCATTTAATCCCACAAATC 57.141 39.130 0.00 0.00 0.00 2.17
27 28 9.028284 CATATAGCCTCATTTAATCCCACAAAT 57.972 33.333 0.00 0.00 0.00 2.32
28 29 8.224025 TCATATAGCCTCATTTAATCCCACAAA 58.776 33.333 0.00 0.00 0.00 2.83
29 30 7.754624 TCATATAGCCTCATTTAATCCCACAA 58.245 34.615 0.00 0.00 0.00 3.33
30 31 7.328404 TCATATAGCCTCATTTAATCCCACA 57.672 36.000 0.00 0.00 0.00 4.17
31 32 6.825721 CCTCATATAGCCTCATTTAATCCCAC 59.174 42.308 0.00 0.00 0.00 4.61
32 33 6.069440 CCCTCATATAGCCTCATTTAATCCCA 60.069 42.308 0.00 0.00 0.00 4.37
33 34 6.360618 CCCTCATATAGCCTCATTTAATCCC 58.639 44.000 0.00 0.00 0.00 3.85
34 35 5.825151 GCCCTCATATAGCCTCATTTAATCC 59.175 44.000 0.00 0.00 0.00 3.01
35 36 6.418101 TGCCCTCATATAGCCTCATTTAATC 58.582 40.000 0.00 0.00 0.00 1.75
36 37 6.392911 TGCCCTCATATAGCCTCATTTAAT 57.607 37.500 0.00 0.00 0.00 1.40
37 38 5.841267 TGCCCTCATATAGCCTCATTTAA 57.159 39.130 0.00 0.00 0.00 1.52
38 39 6.443527 TGTATGCCCTCATATAGCCTCATTTA 59.556 38.462 0.00 0.00 37.49 1.40
39 40 4.942363 ATGCCCTCATATAGCCTCATTT 57.058 40.909 0.00 0.00 0.00 2.32
40 41 4.784838 TGTATGCCCTCATATAGCCTCATT 59.215 41.667 0.00 0.00 37.49 2.57
41 42 4.163078 GTGTATGCCCTCATATAGCCTCAT 59.837 45.833 0.00 0.00 37.49 2.90
42 43 3.515502 GTGTATGCCCTCATATAGCCTCA 59.484 47.826 0.00 0.00 37.49 3.86
43 44 3.118592 GGTGTATGCCCTCATATAGCCTC 60.119 52.174 0.00 0.00 38.22 4.70
44 45 2.840651 GGTGTATGCCCTCATATAGCCT 59.159 50.000 0.00 0.00 38.22 4.58
45 46 3.268023 GGTGTATGCCCTCATATAGCC 57.732 52.381 0.00 0.00 38.22 3.93
46 47 3.268023 GGGTGTATGCCCTCATATAGC 57.732 52.381 0.00 3.66 45.22 2.97
56 57 3.909662 CACAGCTGGGTGTATGCC 58.090 61.111 19.93 0.00 34.09 4.40
62 63 0.736636 CATGCATACACAGCTGGGTG 59.263 55.000 31.87 17.01 44.35 4.61
63 64 0.329261 ACATGCATACACAGCTGGGT 59.671 50.000 27.48 27.48 34.93 4.51
64 65 0.736636 CACATGCATACACAGCTGGG 59.263 55.000 16.28 16.28 0.00 4.45
65 66 1.399440 GTCACATGCATACACAGCTGG 59.601 52.381 19.93 9.66 0.00 4.85
66 67 2.078392 TGTCACATGCATACACAGCTG 58.922 47.619 13.48 13.48 0.00 4.24
67 68 2.477845 TGTCACATGCATACACAGCT 57.522 45.000 0.00 0.00 0.00 4.24
68 69 3.770263 AATGTCACATGCATACACAGC 57.230 42.857 0.00 0.00 0.00 4.40
69 70 6.249050 CGTTTAAATGTCACATGCATACACAG 59.751 38.462 0.00 0.00 0.00 3.66
70 71 6.082984 CGTTTAAATGTCACATGCATACACA 58.917 36.000 0.00 2.73 0.00 3.72
71 72 5.511377 CCGTTTAAATGTCACATGCATACAC 59.489 40.000 0.00 0.00 0.00 2.90
72 73 5.392487 CCCGTTTAAATGTCACATGCATACA 60.392 40.000 0.00 0.02 0.00 2.29
73 74 5.034152 CCCGTTTAAATGTCACATGCATAC 58.966 41.667 0.00 0.00 0.00 2.39
74 75 4.944317 TCCCGTTTAAATGTCACATGCATA 59.056 37.500 0.00 0.00 0.00 3.14
75 76 3.761218 TCCCGTTTAAATGTCACATGCAT 59.239 39.130 6.66 0.00 0.00 3.96
76 77 3.057876 GTCCCGTTTAAATGTCACATGCA 60.058 43.478 6.66 0.00 0.00 3.96
77 78 3.190535 AGTCCCGTTTAAATGTCACATGC 59.809 43.478 6.66 0.00 0.00 4.06
78 79 6.677781 ATAGTCCCGTTTAAATGTCACATG 57.322 37.500 6.66 0.00 0.00 3.21
79 80 8.044908 AGTAATAGTCCCGTTTAAATGTCACAT 58.955 33.333 6.66 0.00 0.00 3.21
80 81 7.388437 AGTAATAGTCCCGTTTAAATGTCACA 58.612 34.615 6.66 0.00 0.00 3.58
81 82 7.763071 AGAGTAATAGTCCCGTTTAAATGTCAC 59.237 37.037 6.66 2.91 0.00 3.67
82 83 7.762615 CAGAGTAATAGTCCCGTTTAAATGTCA 59.237 37.037 6.66 0.00 0.00 3.58
83 84 7.224167 CCAGAGTAATAGTCCCGTTTAAATGTC 59.776 40.741 6.66 0.00 0.00 3.06
84 85 7.046033 CCAGAGTAATAGTCCCGTTTAAATGT 58.954 38.462 6.66 0.00 0.00 2.71
85 86 6.482308 CCCAGAGTAATAGTCCCGTTTAAATG 59.518 42.308 0.04 0.04 0.00 2.32
86 87 6.589135 CCCAGAGTAATAGTCCCGTTTAAAT 58.411 40.000 0.00 0.00 0.00 1.40
87 88 5.627503 GCCCAGAGTAATAGTCCCGTTTAAA 60.628 44.000 0.00 0.00 0.00 1.52
88 89 4.141869 GCCCAGAGTAATAGTCCCGTTTAA 60.142 45.833 0.00 0.00 0.00 1.52
89 90 3.385755 GCCCAGAGTAATAGTCCCGTTTA 59.614 47.826 0.00 0.00 0.00 2.01
90 91 2.169978 GCCCAGAGTAATAGTCCCGTTT 59.830 50.000 0.00 0.00 0.00 3.60
91 92 1.761198 GCCCAGAGTAATAGTCCCGTT 59.239 52.381 0.00 0.00 0.00 4.44
92 93 1.063114 AGCCCAGAGTAATAGTCCCGT 60.063 52.381 0.00 0.00 0.00 5.28
93 94 1.705873 AGCCCAGAGTAATAGTCCCG 58.294 55.000 0.00 0.00 0.00 5.14
94 95 3.181453 GGAAAGCCCAGAGTAATAGTCCC 60.181 52.174 0.00 0.00 34.14 4.46
95 96 3.712218 AGGAAAGCCCAGAGTAATAGTCC 59.288 47.826 0.00 0.00 37.41 3.85
96 97 4.406003 TCAGGAAAGCCCAGAGTAATAGTC 59.594 45.833 0.00 0.00 37.41 2.59
97 98 4.162509 GTCAGGAAAGCCCAGAGTAATAGT 59.837 45.833 0.00 0.00 37.41 2.12
98 99 4.407296 AGTCAGGAAAGCCCAGAGTAATAG 59.593 45.833 0.00 0.00 32.92 1.73
99 100 4.362677 AGTCAGGAAAGCCCAGAGTAATA 58.637 43.478 0.00 0.00 32.92 0.98
100 101 3.185455 AGTCAGGAAAGCCCAGAGTAAT 58.815 45.455 0.00 0.00 32.92 1.89
101 102 2.621070 AGTCAGGAAAGCCCAGAGTAA 58.379 47.619 0.00 0.00 32.92 2.24
102 103 2.327325 AGTCAGGAAAGCCCAGAGTA 57.673 50.000 0.00 0.00 32.92 2.59
103 104 2.327325 TAGTCAGGAAAGCCCAGAGT 57.673 50.000 0.00 0.00 37.75 3.24
104 105 4.219115 TCTATAGTCAGGAAAGCCCAGAG 58.781 47.826 0.00 0.00 37.41 3.35
105 106 4.265856 TCTATAGTCAGGAAAGCCCAGA 57.734 45.455 0.00 0.00 37.41 3.86
106 107 5.186797 CCTATCTATAGTCAGGAAAGCCCAG 59.813 48.000 13.91 0.00 37.41 4.45
107 108 5.087323 CCTATCTATAGTCAGGAAAGCCCA 58.913 45.833 13.91 0.00 37.41 5.36
108 109 5.334421 TCCTATCTATAGTCAGGAAAGCCC 58.666 45.833 17.48 0.00 34.25 5.19
109 110 6.919775 TTCCTATCTATAGTCAGGAAAGCC 57.080 41.667 23.86 0.00 42.71 4.35
113 114 8.861086 GTGTGATTTCCTATCTATAGTCAGGAA 58.139 37.037 22.98 22.98 43.70 3.36
114 115 7.175119 CGTGTGATTTCCTATCTATAGTCAGGA 59.825 40.741 16.44 16.44 35.38 3.86
115 116 7.309177 CGTGTGATTTCCTATCTATAGTCAGG 58.691 42.308 13.26 13.26 0.00 3.86
116 117 6.804295 GCGTGTGATTTCCTATCTATAGTCAG 59.196 42.308 0.00 0.00 0.00 3.51
117 118 6.490381 AGCGTGTGATTTCCTATCTATAGTCA 59.510 38.462 0.00 0.00 0.00 3.41
118 119 6.915349 AGCGTGTGATTTCCTATCTATAGTC 58.085 40.000 0.00 0.00 0.00 2.59
119 120 6.902771 AGCGTGTGATTTCCTATCTATAGT 57.097 37.500 0.00 0.00 0.00 2.12
120 121 9.862371 AATTAGCGTGTGATTTCCTATCTATAG 57.138 33.333 0.00 0.00 0.00 1.31
122 123 8.993121 CAAATTAGCGTGTGATTTCCTATCTAT 58.007 33.333 0.00 0.00 0.00 1.98
123 124 7.042051 GCAAATTAGCGTGTGATTTCCTATCTA 60.042 37.037 0.00 0.00 0.00 1.98
124 125 6.238484 GCAAATTAGCGTGTGATTTCCTATCT 60.238 38.462 0.00 0.00 0.00 1.98
125 126 5.909610 GCAAATTAGCGTGTGATTTCCTATC 59.090 40.000 0.00 0.00 0.00 2.08
126 127 5.821204 GCAAATTAGCGTGTGATTTCCTAT 58.179 37.500 0.00 0.00 0.00 2.57
127 128 5.229921 GCAAATTAGCGTGTGATTTCCTA 57.770 39.130 0.00 0.00 0.00 2.94
128 129 4.096732 GCAAATTAGCGTGTGATTTCCT 57.903 40.909 0.00 0.00 0.00 3.36
140 141 4.518970 TCCTATTTGATCCCGCAAATTAGC 59.481 41.667 7.52 0.00 43.83 3.09
141 142 5.530915 TGTCCTATTTGATCCCGCAAATTAG 59.469 40.000 7.52 4.40 43.83 1.73
142 143 5.441500 TGTCCTATTTGATCCCGCAAATTA 58.558 37.500 7.52 0.00 43.83 1.40
143 144 4.277476 TGTCCTATTTGATCCCGCAAATT 58.723 39.130 7.52 0.00 43.83 1.82
144 145 3.897239 TGTCCTATTTGATCCCGCAAAT 58.103 40.909 0.00 0.00 46.79 2.32
145 146 3.358111 TGTCCTATTTGATCCCGCAAA 57.642 42.857 0.00 0.00 41.49 3.68
146 147 3.118075 TCATGTCCTATTTGATCCCGCAA 60.118 43.478 0.00 0.00 0.00 4.85
147 148 2.437651 TCATGTCCTATTTGATCCCGCA 59.562 45.455 0.00 0.00 0.00 5.69
148 149 3.070018 CTCATGTCCTATTTGATCCCGC 58.930 50.000 0.00 0.00 0.00 6.13
149 150 4.562347 CCTCTCATGTCCTATTTGATCCCG 60.562 50.000 0.00 0.00 0.00 5.14
150 151 4.594920 TCCTCTCATGTCCTATTTGATCCC 59.405 45.833 0.00 0.00 0.00 3.85
151 152 5.815233 TCCTCTCATGTCCTATTTGATCC 57.185 43.478 0.00 0.00 0.00 3.36
152 153 6.042552 TCCTTCCTCTCATGTCCTATTTGATC 59.957 42.308 0.00 0.00 0.00 2.92
153 154 5.907662 TCCTTCCTCTCATGTCCTATTTGAT 59.092 40.000 0.00 0.00 0.00 2.57
154 155 5.129485 GTCCTTCCTCTCATGTCCTATTTGA 59.871 44.000 0.00 0.00 0.00 2.69
155 156 5.130145 AGTCCTTCCTCTCATGTCCTATTTG 59.870 44.000 0.00 0.00 0.00 2.32
156 157 5.284582 AGTCCTTCCTCTCATGTCCTATTT 58.715 41.667 0.00 0.00 0.00 1.40
157 158 4.889780 AGTCCTTCCTCTCATGTCCTATT 58.110 43.478 0.00 0.00 0.00 1.73
158 159 4.551215 AGTCCTTCCTCTCATGTCCTAT 57.449 45.455 0.00 0.00 0.00 2.57
159 160 5.389520 CATAGTCCTTCCTCTCATGTCCTA 58.610 45.833 0.00 0.00 0.00 2.94
160 161 2.938428 AGTCCTTCCTCTCATGTCCT 57.062 50.000 0.00 0.00 0.00 3.85
161 162 3.244044 GCATAGTCCTTCCTCTCATGTCC 60.244 52.174 0.00 0.00 0.00 4.02
162 163 3.640967 AGCATAGTCCTTCCTCTCATGTC 59.359 47.826 0.00 0.00 0.00 3.06
163 164 3.652055 AGCATAGTCCTTCCTCTCATGT 58.348 45.455 0.00 0.00 0.00 3.21
164 165 5.798125 TTAGCATAGTCCTTCCTCTCATG 57.202 43.478 0.00 0.00 0.00 3.07
165 166 7.147408 ACAAATTAGCATAGTCCTTCCTCTCAT 60.147 37.037 0.00 0.00 0.00 2.90
166 167 6.156949 ACAAATTAGCATAGTCCTTCCTCTCA 59.843 38.462 0.00 0.00 0.00 3.27
167 168 6.481644 CACAAATTAGCATAGTCCTTCCTCTC 59.518 42.308 0.00 0.00 0.00 3.20
168 169 6.352516 CACAAATTAGCATAGTCCTTCCTCT 58.647 40.000 0.00 0.00 0.00 3.69
169 170 5.529060 CCACAAATTAGCATAGTCCTTCCTC 59.471 44.000 0.00 0.00 0.00 3.71
170 171 5.440610 CCACAAATTAGCATAGTCCTTCCT 58.559 41.667 0.00 0.00 0.00 3.36
171 172 4.580580 CCCACAAATTAGCATAGTCCTTCC 59.419 45.833 0.00 0.00 0.00 3.46
172 173 5.437060 TCCCACAAATTAGCATAGTCCTTC 58.563 41.667 0.00 0.00 0.00 3.46
173 174 5.450818 TCCCACAAATTAGCATAGTCCTT 57.549 39.130 0.00 0.00 0.00 3.36
174 175 5.380043 CATCCCACAAATTAGCATAGTCCT 58.620 41.667 0.00 0.00 0.00 3.85
177 178 3.891366 GCCATCCCACAAATTAGCATAGT 59.109 43.478 0.00 0.00 0.00 2.12
190 192 6.899393 TCAGATTATTATTTGCCATCCCAC 57.101 37.500 0.00 0.00 0.00 4.61
198 200 5.280945 TGCGCCTTTCAGATTATTATTTGC 58.719 37.500 4.18 0.00 0.00 3.68
203 205 6.486320 TGATTGATGCGCCTTTCAGATTATTA 59.514 34.615 4.18 0.00 0.00 0.98
239 241 7.182060 AGGTAGACACACCCAATGAAAAATAT 58.818 34.615 0.00 0.00 39.62 1.28
247 249 3.263425 ACCTAAGGTAGACACACCCAATG 59.737 47.826 0.00 0.00 39.62 2.82
253 255 5.464030 TTTGAGACCTAAGGTAGACACAC 57.536 43.478 0.00 0.00 35.25 3.82
254 256 5.011738 CCTTTTGAGACCTAAGGTAGACACA 59.988 44.000 0.00 0.00 35.25 3.72
261 263 5.845065 AGTAGTTCCTTTTGAGACCTAAGGT 59.155 40.000 0.00 0.00 39.53 3.50
295 297 7.337689 ACAATGCACTATCTGAAAATAGCTTCA 59.662 33.333 0.00 0.00 33.33 3.02
313 315 2.626840 ACCACACCAAAAACAATGCAC 58.373 42.857 0.00 0.00 0.00 4.57
321 323 6.947464 TGGAAGAAATTTACCACACCAAAAA 58.053 32.000 7.01 0.00 0.00 1.94
332 334 6.490566 TTTACGGCTCTGGAAGAAATTTAC 57.509 37.500 0.00 0.00 46.34 2.01
347 349 4.400884 TCCATGCATTTAACATTTACGGCT 59.599 37.500 0.00 0.00 0.00 5.52
362 364 8.362639 GGTAGACAAATAATTCAATCCATGCAT 58.637 33.333 0.00 0.00 0.00 3.96
371 373 9.005777 GTAGGTGTTGGTAGACAAATAATTCAA 57.994 33.333 0.00 0.00 41.58 2.69
397 399 6.037172 GGTCGCATGCAGGGTTAATATTATAG 59.963 42.308 19.57 0.00 0.00 1.31
398 400 5.878116 GGTCGCATGCAGGGTTAATATTATA 59.122 40.000 19.57 0.00 0.00 0.98
399 401 4.700213 GGTCGCATGCAGGGTTAATATTAT 59.300 41.667 19.57 0.00 0.00 1.28
412 414 1.198867 GTTTGTACATGGTCGCATGCA 59.801 47.619 19.57 1.73 36.08 3.96
413 415 1.468520 AGTTTGTACATGGTCGCATGC 59.531 47.619 7.91 7.91 36.08 4.06
415 417 2.027192 AGGAGTTTGTACATGGTCGCAT 60.027 45.455 0.00 0.00 0.00 4.73
420 425 2.572104 GAGGGAGGAGTTTGTACATGGT 59.428 50.000 0.00 0.00 0.00 3.55
422 427 3.007940 TGTGAGGGAGGAGTTTGTACATG 59.992 47.826 0.00 0.00 0.00 3.21
427 432 1.352352 CCATGTGAGGGAGGAGTTTGT 59.648 52.381 0.00 0.00 0.00 2.83
458 463 2.245438 TATGGGCATCACCGTTGCGA 62.245 55.000 0.00 0.00 41.07 5.10
467 472 3.636300 GGTTGCTAATGTTATGGGCATCA 59.364 43.478 0.00 0.00 32.87 3.07
514 519 4.104383 ACACCATGTTGAGAATTCACCT 57.896 40.909 8.44 0.00 31.71 4.00
603 611 3.137533 TGACAGAAATGCGTGATCAACA 58.862 40.909 0.00 0.00 0.00 3.33
610 618 2.348362 TCGCTAATGACAGAAATGCGTG 59.652 45.455 0.00 0.00 42.11 5.34
612 620 2.604914 AGTCGCTAATGACAGAAATGCG 59.395 45.455 0.00 0.00 41.41 4.73
619 627 4.992688 AGAAGAAGAGTCGCTAATGACAG 58.007 43.478 0.00 0.00 41.41 3.51
656 664 2.158755 AGGAATTAGGATTGCCCGAGTG 60.159 50.000 0.00 0.00 40.87 3.51
676 684 5.751028 GGAGTAAGTAAATGCTAGCTGTCAG 59.249 44.000 17.23 0.00 0.00 3.51
705 713 7.389803 ACTATGTTAAAGCACACATATTGCA 57.610 32.000 0.96 0.00 42.83 4.08
793 804 1.220749 GGCTCCGCACATAGGAACA 59.779 57.895 0.00 0.00 37.32 3.18
794 805 0.107654 AAGGCTCCGCACATAGGAAC 60.108 55.000 0.00 0.00 37.32 3.62
795 806 1.412710 CTAAGGCTCCGCACATAGGAA 59.587 52.381 0.00 0.00 37.32 3.36
796 807 1.040646 CTAAGGCTCCGCACATAGGA 58.959 55.000 0.00 0.00 36.20 2.94
797 808 0.753262 ACTAAGGCTCCGCACATAGG 59.247 55.000 0.00 0.00 0.00 2.57
798 809 1.137086 ACACTAAGGCTCCGCACATAG 59.863 52.381 0.00 0.00 0.00 2.23
799 810 1.191535 ACACTAAGGCTCCGCACATA 58.808 50.000 0.00 0.00 0.00 2.29
800 811 0.324943 AACACTAAGGCTCCGCACAT 59.675 50.000 0.00 0.00 0.00 3.21
801 812 0.602638 CAACACTAAGGCTCCGCACA 60.603 55.000 0.00 0.00 0.00 4.57
802 813 0.602905 ACAACACTAAGGCTCCGCAC 60.603 55.000 0.00 0.00 0.00 5.34
803 814 0.320421 GACAACACTAAGGCTCCGCA 60.320 55.000 0.00 0.00 0.00 5.69
804 815 1.019805 GGACAACACTAAGGCTCCGC 61.020 60.000 0.00 0.00 0.00 5.54
805 816 0.320374 TGGACAACACTAAGGCTCCG 59.680 55.000 0.00 0.00 0.00 4.63
806 817 1.809684 GTGGACAACACTAAGGCTCC 58.190 55.000 0.00 0.00 46.72 4.70
815 826 1.218875 TGATCGTGCGTGGACAACAC 61.219 55.000 0.00 0.00 46.78 3.32
816 827 0.530870 TTGATCGTGCGTGGACAACA 60.531 50.000 0.00 0.00 0.00 3.33
817 828 0.110823 GTTGATCGTGCGTGGACAAC 60.111 55.000 0.00 0.00 0.00 3.32
818 829 0.530870 TGTTGATCGTGCGTGGACAA 60.531 50.000 0.00 0.00 0.00 3.18
819 830 0.943835 CTGTTGATCGTGCGTGGACA 60.944 55.000 0.00 0.00 0.00 4.02
820 831 0.944311 ACTGTTGATCGTGCGTGGAC 60.944 55.000 0.00 0.00 0.00 4.02
821 832 0.599060 TACTGTTGATCGTGCGTGGA 59.401 50.000 0.00 0.00 0.00 4.02
822 833 1.588404 GATACTGTTGATCGTGCGTGG 59.412 52.381 0.00 0.00 0.00 4.94
823 834 2.530177 AGATACTGTTGATCGTGCGTG 58.470 47.619 0.00 0.00 0.00 5.34
824 835 2.423892 AGAGATACTGTTGATCGTGCGT 59.576 45.455 0.00 0.00 0.00 5.24
825 836 3.071786 AGAGATACTGTTGATCGTGCG 57.928 47.619 0.00 0.00 0.00 5.34
826 837 6.020281 CAGTTTAGAGATACTGTTGATCGTGC 60.020 42.308 0.00 0.00 37.56 5.34
827 838 6.473778 CCAGTTTAGAGATACTGTTGATCGTG 59.526 42.308 0.00 0.00 40.06 4.35
828 839 6.405953 CCCAGTTTAGAGATACTGTTGATCGT 60.406 42.308 0.00 0.00 40.06 3.73
829 840 5.980116 CCCAGTTTAGAGATACTGTTGATCG 59.020 44.000 0.00 0.00 40.06 3.69
830 841 6.879400 ACCCAGTTTAGAGATACTGTTGATC 58.121 40.000 0.00 0.00 40.06 2.92
831 842 6.875972 ACCCAGTTTAGAGATACTGTTGAT 57.124 37.500 0.00 0.00 40.06 2.57
832 843 7.632898 GCATACCCAGTTTAGAGATACTGTTGA 60.633 40.741 0.00 0.00 40.06 3.18
833 844 6.480320 GCATACCCAGTTTAGAGATACTGTTG 59.520 42.308 0.00 0.00 40.06 3.33
834 845 6.384305 AGCATACCCAGTTTAGAGATACTGTT 59.616 38.462 0.00 0.00 40.06 3.16
835 846 5.900123 AGCATACCCAGTTTAGAGATACTGT 59.100 40.000 0.00 0.00 40.06 3.55
836 847 6.183360 ACAGCATACCCAGTTTAGAGATACTG 60.183 42.308 0.00 0.00 41.08 2.74
837 848 5.900123 ACAGCATACCCAGTTTAGAGATACT 59.100 40.000 0.00 0.00 0.00 2.12
838 849 6.163135 ACAGCATACCCAGTTTAGAGATAC 57.837 41.667 0.00 0.00 0.00 2.24
839 850 5.009710 CGACAGCATACCCAGTTTAGAGATA 59.990 44.000 0.00 0.00 0.00 1.98
840 851 4.202161 CGACAGCATACCCAGTTTAGAGAT 60.202 45.833 0.00 0.00 0.00 2.75
841 852 3.130516 CGACAGCATACCCAGTTTAGAGA 59.869 47.826 0.00 0.00 0.00 3.10
842 853 3.119101 ACGACAGCATACCCAGTTTAGAG 60.119 47.826 0.00 0.00 0.00 2.43
843 854 2.829720 ACGACAGCATACCCAGTTTAGA 59.170 45.455 0.00 0.00 0.00 2.10
844 855 3.187700 GACGACAGCATACCCAGTTTAG 58.812 50.000 0.00 0.00 0.00 1.85
845 856 2.563620 TGACGACAGCATACCCAGTTTA 59.436 45.455 0.00 0.00 0.00 2.01
846 857 1.346395 TGACGACAGCATACCCAGTTT 59.654 47.619 0.00 0.00 0.00 2.66
847 858 0.973632 TGACGACAGCATACCCAGTT 59.026 50.000 0.00 0.00 0.00 3.16
848 859 0.246635 GTGACGACAGCATACCCAGT 59.753 55.000 0.00 0.00 0.00 4.00
849 860 0.532573 AGTGACGACAGCATACCCAG 59.467 55.000 0.00 0.00 0.00 4.45
850 861 0.530744 GAGTGACGACAGCATACCCA 59.469 55.000 0.00 0.00 0.00 4.51
851 862 0.530744 TGAGTGACGACAGCATACCC 59.469 55.000 0.00 0.00 0.00 3.69
852 863 1.914634 CTGAGTGACGACAGCATACC 58.085 55.000 0.00 0.00 0.00 2.73
858 869 1.735920 GCAGGCTGAGTGACGACAG 60.736 63.158 20.86 8.07 37.22 3.51
859 870 2.340078 GCAGGCTGAGTGACGACA 59.660 61.111 20.86 0.00 0.00 4.35
860 871 2.807045 CGCAGGCTGAGTGACGAC 60.807 66.667 20.86 0.00 0.00 4.34
861 872 4.056125 CCGCAGGCTGAGTGACGA 62.056 66.667 20.86 0.00 46.14 4.20
877 888 4.779733 TGGGAGGGAGAGCGGACC 62.780 72.222 0.00 0.00 0.00 4.46
878 889 2.066999 ATTGGGAGGGAGAGCGGAC 61.067 63.158 0.00 0.00 0.00 4.79
879 890 2.066393 CATTGGGAGGGAGAGCGGA 61.066 63.158 0.00 0.00 0.00 5.54
880 891 2.370445 ACATTGGGAGGGAGAGCGG 61.370 63.158 0.00 0.00 0.00 5.52
898 909 7.911651 AGAAAAGGAGAAAGTAGATCACATCA 58.088 34.615 0.00 0.00 0.00 3.07
900 911 9.579932 AAAAGAAAAGGAGAAAGTAGATCACAT 57.420 29.630 0.00 0.00 0.00 3.21
944 956 5.681880 TGGTTTCGTTCGCAAAAGTAATAG 58.318 37.500 0.00 0.00 0.00 1.73
949 961 1.533129 GCTGGTTTCGTTCGCAAAAGT 60.533 47.619 0.00 0.00 0.00 2.66
950 962 1.120437 GCTGGTTTCGTTCGCAAAAG 58.880 50.000 0.00 0.00 0.00 2.27
951 963 0.452184 TGCTGGTTTCGTTCGCAAAA 59.548 45.000 0.00 0.00 0.00 2.44
952 964 0.028770 CTGCTGGTTTCGTTCGCAAA 59.971 50.000 0.00 0.00 0.00 3.68
953 965 1.092921 ACTGCTGGTTTCGTTCGCAA 61.093 50.000 0.00 0.00 0.00 4.85
955 967 1.076332 ATACTGCTGGTTTCGTTCGC 58.924 50.000 0.00 0.00 0.00 4.70
956 968 3.508762 AGTATACTGCTGGTTTCGTTCG 58.491 45.455 4.10 0.00 0.00 3.95
957 969 4.503370 GCTAGTATACTGCTGGTTTCGTTC 59.497 45.833 15.90 0.00 0.00 3.95
958 970 4.081862 TGCTAGTATACTGCTGGTTTCGTT 60.082 41.667 15.90 0.00 0.00 3.85
959 971 3.446161 TGCTAGTATACTGCTGGTTTCGT 59.554 43.478 15.90 0.00 0.00 3.85
961 973 6.284459 AGAATGCTAGTATACTGCTGGTTTC 58.716 40.000 15.90 15.28 0.00 2.78
962 974 6.240549 AGAATGCTAGTATACTGCTGGTTT 57.759 37.500 15.90 9.28 0.00 3.27
976 991 8.764558 TAGATCCCTCTAGTACTAGAATGCTAG 58.235 40.741 28.16 17.40 41.22 3.42
989 1004 8.633724 TGATGGGTATAAATAGATCCCTCTAGT 58.366 37.037 0.00 0.00 37.41 2.57
990 1005 9.667607 ATGATGGGTATAAATAGATCCCTCTAG 57.332 37.037 0.00 0.00 37.41 2.43
1011 1026 1.377725 GGCTGCCGGGGATATGATG 60.378 63.158 1.35 0.00 0.00 3.07
1069 1084 6.346096 GCGGCACTTCTATATTGGGAATATA 58.654 40.000 0.00 0.00 35.72 0.86
1077 1093 0.512952 GCGGCGGCACTTCTATATTG 59.487 55.000 9.78 0.00 39.62 1.90
1097 1113 2.804527 CAGGTGATCGCTGATAATGGTG 59.195 50.000 6.18 0.00 0.00 4.17
1107 1123 3.083997 GGGGGACAGGTGATCGCT 61.084 66.667 6.18 0.00 0.00 4.93
1115 1131 1.210478 CACAAGACTATGGGGGACAGG 59.790 57.143 0.00 0.00 0.00 4.00
1150 1174 1.202336 GCTTTTGCTGCAGTGTCACTT 60.202 47.619 16.64 0.00 43.35 3.16
1177 1201 8.966155 TGGTGTTCTCCATCCAAGTATATATA 57.034 34.615 0.00 0.00 31.96 0.86
1178 1202 7.872061 TGGTGTTCTCCATCCAAGTATATAT 57.128 36.000 0.00 0.00 31.96 0.86
1274 1298 2.203625 TTCCCAGCCTTGGTTGCC 60.204 61.111 0.00 0.00 43.40 4.52
1275 1299 1.228552 TCTTCCCAGCCTTGGTTGC 60.229 57.895 0.00 0.00 43.40 4.17
1276 1300 0.401738 TCTCTTCCCAGCCTTGGTTG 59.598 55.000 0.00 0.00 43.40 3.77
1277 1301 1.149101 TTCTCTTCCCAGCCTTGGTT 58.851 50.000 0.00 0.00 43.40 3.67
1278 1302 0.402121 GTTCTCTTCCCAGCCTTGGT 59.598 55.000 0.00 0.00 43.40 3.67
1279 1303 0.401738 TGTTCTCTTCCCAGCCTTGG 59.598 55.000 0.00 0.00 44.60 3.61
1280 1304 2.157738 CTTGTTCTCTTCCCAGCCTTG 58.842 52.381 0.00 0.00 0.00 3.61
1281 1305 1.074566 CCTTGTTCTCTTCCCAGCCTT 59.925 52.381 0.00 0.00 0.00 4.35
1282 1306 0.695347 CCTTGTTCTCTTCCCAGCCT 59.305 55.000 0.00 0.00 0.00 4.58
1283 1307 0.693049 TCCTTGTTCTCTTCCCAGCC 59.307 55.000 0.00 0.00 0.00 4.85
1284 1308 1.339535 CCTCCTTGTTCTCTTCCCAGC 60.340 57.143 0.00 0.00 0.00 4.85
1285 1309 1.339535 GCCTCCTTGTTCTCTTCCCAG 60.340 57.143 0.00 0.00 0.00 4.45
1291 1315 1.187087 CTACCGCCTCCTTGTTCTCT 58.813 55.000 0.00 0.00 0.00 3.10
1496 1526 0.170561 CAGCTGCTGCCAGAATCAAC 59.829 55.000 17.73 0.00 41.77 3.18
1504 1534 3.654143 ATGGACCAGCTGCTGCCA 61.654 61.111 24.73 24.73 40.80 4.92
1571 1601 3.397439 AGTCCTGGCATCAGCGCT 61.397 61.111 2.64 2.64 43.41 5.92
1575 1605 0.464870 CCTCTCAGTCCTGGCATCAG 59.535 60.000 0.00 0.00 40.59 2.90
1586 1616 2.644212 CGCTGCTCCACCTCTCAGT 61.644 63.158 0.00 0.00 0.00 3.41
1681 1711 3.200593 GCCCTCGTGCTGAGCATG 61.201 66.667 20.16 20.16 45.79 4.06
1706 1736 3.699894 CTCCTCACCGGCACTGCT 61.700 66.667 0.00 0.00 0.00 4.24
1821 1851 3.007831 GCAAAGAGGGAGATCTATGAGGG 59.992 52.174 0.00 0.00 0.00 4.30
1865 1895 2.709475 CAAGCGCTAATGGACGGC 59.291 61.111 12.05 0.00 0.00 5.68
1866 1896 2.709475 GCAAGCGCTAATGGACGG 59.291 61.111 12.05 0.00 34.30 4.79
1896 1926 3.694043 TCAATGCAACACCTAGCTACA 57.306 42.857 0.00 0.00 0.00 2.74
1898 1928 3.009723 GCTTCAATGCAACACCTAGCTA 58.990 45.455 0.00 0.00 0.00 3.32
1907 1937 1.284297 GGTTGGCGCTTCAATGCAAC 61.284 55.000 7.64 11.08 0.00 4.17
1912 1942 5.652994 TTAATTAAGGTTGGCGCTTCAAT 57.347 34.783 7.64 0.00 0.00 2.57
1948 1978 6.959361 AGCACGCAGTTTATTAATAATGGAG 58.041 36.000 8.70 6.22 41.61 3.86
1957 1987 4.674101 GCCAATTGAGCACGCAGTTTATTA 60.674 41.667 7.12 0.00 41.61 0.98
1968 1998 1.340889 TGAAACCTGCCAATTGAGCAC 59.659 47.619 15.03 7.96 36.01 4.40
2039 2086 0.810031 CCCTCCCAGTAAACGATGCG 60.810 60.000 0.00 0.00 0.00 4.73
2076 2123 2.223745 ACAACAAAATAACGTCCCGCT 58.776 42.857 0.00 0.00 0.00 5.52
2077 2124 2.691984 ACAACAAAATAACGTCCCGC 57.308 45.000 0.00 0.00 0.00 6.13
2078 2125 7.167801 ACAAAATAACAACAAAATAACGTCCCG 59.832 33.333 0.00 0.00 0.00 5.14
2079 2126 8.355272 ACAAAATAACAACAAAATAACGTCCC 57.645 30.769 0.00 0.00 0.00 4.46
2104 2151 4.270084 CGAGCAACAAGAAAACACTCACTA 59.730 41.667 0.00 0.00 0.00 2.74
2106 2153 3.354397 CGAGCAACAAGAAAACACTCAC 58.646 45.455 0.00 0.00 0.00 3.51
2113 2160 1.748493 ACCAAGCGAGCAACAAGAAAA 59.252 42.857 0.00 0.00 0.00 2.29
2179 2226 6.072649 TCCGGATTCTGGACACTGTTATATA 58.927 40.000 10.32 0.00 0.00 0.86
2180 2227 4.899457 TCCGGATTCTGGACACTGTTATAT 59.101 41.667 10.32 0.00 0.00 0.86
2181 2228 4.283337 TCCGGATTCTGGACACTGTTATA 58.717 43.478 10.32 0.00 0.00 0.98
2182 2229 3.104512 TCCGGATTCTGGACACTGTTAT 58.895 45.455 10.32 0.00 0.00 1.89
2183 2230 2.531771 TCCGGATTCTGGACACTGTTA 58.468 47.619 10.32 0.00 0.00 2.41
2184 2231 1.348064 TCCGGATTCTGGACACTGTT 58.652 50.000 10.32 0.00 0.00 3.16
2185 2232 3.067011 TCCGGATTCTGGACACTGT 57.933 52.632 10.32 0.00 0.00 3.55
2237 2284 6.878317 AGAACTCATCAACCTTCGATAATCA 58.122 36.000 0.00 0.00 0.00 2.57
2242 2289 4.627467 CGAAAGAACTCATCAACCTTCGAT 59.373 41.667 0.00 0.00 0.00 3.59
2245 2292 3.120165 GCCGAAAGAACTCATCAACCTTC 60.120 47.826 0.00 0.00 0.00 3.46
2266 2313 2.814280 TTATCAACGCCTAGCCTAGC 57.186 50.000 0.00 0.00 0.00 3.42
2267 2314 4.686554 GTGATTTATCAACGCCTAGCCTAG 59.313 45.833 0.00 0.00 38.75 3.02
2268 2315 4.344102 AGTGATTTATCAACGCCTAGCCTA 59.656 41.667 0.00 0.00 38.75 3.93
2269 2316 3.134804 AGTGATTTATCAACGCCTAGCCT 59.865 43.478 0.00 0.00 38.75 4.58
2270 2317 3.467803 AGTGATTTATCAACGCCTAGCC 58.532 45.455 0.00 0.00 38.75 3.93
2273 2320 4.684242 CGCATAGTGATTTATCAACGCCTA 59.316 41.667 0.00 0.00 38.75 3.93
2279 2326 4.116238 TCACGCGCATAGTGATTTATCAA 58.884 39.130 5.73 0.00 42.91 2.57
2290 2337 1.849829 TCGTTTACATCACGCGCATAG 59.150 47.619 5.73 0.00 37.57 2.23
2292 2339 0.645355 CTCGTTTACATCACGCGCAT 59.355 50.000 5.73 0.00 37.57 4.73
2295 2342 1.057636 ACACTCGTTTACATCACGCG 58.942 50.000 3.53 3.53 37.57 6.01
2298 2345 5.779806 ATAAGCACACTCGTTTACATCAC 57.220 39.130 0.00 0.00 0.00 3.06
2346 2393 1.826385 CCACACCCTTGATTCCTGAC 58.174 55.000 0.00 0.00 0.00 3.51
2368 2415 3.469859 TCAGGAAATCAGGGGGTTATCA 58.530 45.455 0.00 0.00 0.00 2.15
2377 2425 2.338577 AGCGGAATCAGGAAATCAGG 57.661 50.000 0.00 0.00 0.00 3.86
2383 2431 4.634443 GCTTTAAACTAGCGGAATCAGGAA 59.366 41.667 0.00 0.00 0.00 3.36
2387 2435 4.941263 ACATGCTTTAAACTAGCGGAATCA 59.059 37.500 0.00 0.00 41.54 2.57
2409 2458 9.685828 TGGCAACTTTATTTAACTAACAATCAC 57.314 29.630 0.00 0.00 37.61 3.06
2457 2506 8.027189 GTCCAAAACTCCATATTAACACTTTCC 58.973 37.037 0.00 0.00 0.00 3.13
2459 2508 8.706322 AGTCCAAAACTCCATATTAACACTTT 57.294 30.769 0.00 0.00 30.02 2.66
2490 2539 4.532126 TGCTCCATACATCGATATTTCCCT 59.468 41.667 0.00 0.00 0.00 4.20
2509 2558 9.408069 GTGGTATAGTGTGTTAGTTATATGCTC 57.592 37.037 0.00 0.00 0.00 4.26
2510 2559 9.144298 AGTGGTATAGTGTGTTAGTTATATGCT 57.856 33.333 0.00 0.00 0.00 3.79
2511 2560 9.408069 GAGTGGTATAGTGTGTTAGTTATATGC 57.592 37.037 0.00 0.00 0.00 3.14
2512 2561 9.909644 GGAGTGGTATAGTGTGTTAGTTATATG 57.090 37.037 0.00 0.00 0.00 1.78
2519 2570 6.931838 TCAAAGGAGTGGTATAGTGTGTTAG 58.068 40.000 0.00 0.00 0.00 2.34
2525 2576 6.934645 TCAAACTTCAAAGGAGTGGTATAGTG 59.065 38.462 0.00 0.00 0.00 2.74
2526 2577 7.074653 TCAAACTTCAAAGGAGTGGTATAGT 57.925 36.000 0.00 0.00 0.00 2.12
2527 2578 7.094762 GGTTCAAACTTCAAAGGAGTGGTATAG 60.095 40.741 0.00 0.00 0.00 1.31
2536 2590 4.739195 CAAACGGTTCAAACTTCAAAGGA 58.261 39.130 0.00 0.00 0.00 3.36
2554 2608 3.944650 ACAAAAATGAAACAGGGGCAAAC 59.055 39.130 0.00 0.00 0.00 2.93
2586 2641 5.070446 AGCAGAATGTATTATCGGTCTTCCA 59.930 40.000 0.00 0.00 39.31 3.53
2589 2644 4.752101 GCAGCAGAATGTATTATCGGTCTT 59.248 41.667 0.00 0.00 39.31 3.01
2599 2654 4.038402 GCCCAATTTAGCAGCAGAATGTAT 59.962 41.667 0.00 0.00 39.31 2.29
2619 2674 4.310288 GCAACTCCTCTCTTGCCC 57.690 61.111 0.00 0.00 37.41 5.36
2637 2693 8.279970 TCATATGTTTCTAGAACCCAACATTG 57.720 34.615 20.22 17.35 39.84 2.82
2654 2710 7.692460 TTTCATGTCTGCTTTCTCATATGTT 57.308 32.000 1.90 0.00 0.00 2.71
2656 2712 9.269453 TCTATTTCATGTCTGCTTTCTCATATG 57.731 33.333 0.00 0.00 0.00 1.78
2658 2714 8.260114 TGTCTATTTCATGTCTGCTTTCTCATA 58.740 33.333 0.00 0.00 0.00 2.15
2674 2732 4.808895 GTGTGTGAGTGTGTGTCTATTTCA 59.191 41.667 0.00 0.00 0.00 2.69
2691 2749 7.087409 ACCACAATCAATATGTATGTGTGTG 57.913 36.000 13.17 0.00 39.70 3.82
2701 2759 8.954350 AGAAAGAGAAGAACCACAATCAATATG 58.046 33.333 0.00 0.00 0.00 1.78
2704 2762 7.830099 AAGAAAGAGAAGAACCACAATCAAT 57.170 32.000 0.00 0.00 0.00 2.57
2796 2855 9.341078 AGAGCTAGGTTACTCTTACTTATGTAC 57.659 37.037 0.00 0.00 40.35 2.90
2802 2861 7.541916 AAACAGAGCTAGGTTACTCTTACTT 57.458 36.000 0.00 0.00 41.31 2.24
2853 2912 0.176680 CGGGCTGCACTTACTCTCAT 59.823 55.000 0.00 0.00 0.00 2.90
2888 2947 4.302067 AGGCCCTATATATGTGGATGGAG 58.698 47.826 0.00 0.00 0.00 3.86
2891 2950 6.613271 AGACTTAGGCCCTATATATGTGGATG 59.387 42.308 0.00 0.00 0.00 3.51
2907 2966 6.743575 TCTTCTTAATGCAAAGACTTAGGC 57.256 37.500 0.19 5.13 35.25 3.93
2913 2972 9.339492 CAATTCTCTTCTTCTTAATGCAAAGAC 57.661 33.333 0.19 0.00 35.25 3.01
2914 2973 8.517878 CCAATTCTCTTCTTCTTAATGCAAAGA 58.482 33.333 0.00 0.00 33.69 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.