Multiple sequence alignment - TraesCS4B01G353300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G353300 chr4B 100.000 2504 0 0 1 2504 644881006 644878503 0.000000e+00 4625.0
1 TraesCS4B01G353300 chr4B 92.469 810 49 9 951 1749 645058457 645057649 0.000000e+00 1147.0
2 TraesCS4B01G353300 chr4B 87.793 811 67 12 966 1749 644870253 644869448 0.000000e+00 920.0
3 TraesCS4B01G353300 chr4B 92.827 237 15 2 639 874 645058739 645058504 2.380000e-90 342.0
4 TraesCS4B01G353300 chr4B 88.538 253 23 4 1925 2171 644869230 644868978 4.050000e-78 302.0
5 TraesCS4B01G353300 chr4B 82.060 301 26 14 321 612 645059005 645058724 5.390000e-57 231.0
6 TraesCS4B01G353300 chr4B 93.478 92 6 0 2081 2172 645054288 645054197 1.210000e-28 137.0
7 TraesCS4B01G353300 chr4B 82.581 155 13 9 1815 1968 645057632 645057491 9.400000e-25 124.0
8 TraesCS4B01G353300 chr4B 100.000 33 0 0 9 41 564787147 564787115 7.480000e-06 62.1
9 TraesCS4B01G353300 chr4B 94.444 36 2 0 1765 1800 31864710 31864745 3.480000e-04 56.5
10 TraesCS4B01G353300 chr4B 100.000 29 0 0 918 946 645058504 645058476 1.000000e-03 54.7
11 TraesCS4B01G353300 chr5A 85.612 841 75 22 639 1478 683201052 683201847 0.000000e+00 841.0
12 TraesCS4B01G353300 chr5A 81.559 526 88 6 1076 1594 684316058 684315535 2.300000e-115 425.0
13 TraesCS4B01G353300 chr5A 91.544 272 19 3 47 315 632012436 632012706 3.040000e-99 372.0
14 TraesCS4B01G353300 chr5A 88.123 261 26 4 1916 2172 683209128 683209387 3.130000e-79 305.0
15 TraesCS4B01G353300 chr5A 94.545 165 7 2 1481 1644 683208839 683209002 1.150000e-63 254.0
16 TraesCS4B01G353300 chr5A 100.000 32 0 0 9 40 575371413 575371382 2.690000e-05 60.2
17 TraesCS4B01G353300 chr4D 89.164 646 57 9 639 1282 501039703 501040337 0.000000e+00 793.0
18 TraesCS4B01G353300 chr4D 86.451 679 79 5 963 1629 501049331 501050008 0.000000e+00 732.0
19 TraesCS4B01G353300 chr4D 92.593 270 15 4 47 315 109354114 109353849 1.410000e-102 383.0
20 TraesCS4B01G353300 chr4D 85.430 302 31 9 318 612 501039423 501039718 4.050000e-78 302.0
21 TraesCS4B01G353300 chr4D 87.302 252 30 2 2253 2502 505533258 505533007 1.130000e-73 287.0
22 TraesCS4B01G353300 chr4D 88.268 179 16 4 1937 2111 501053726 501053903 2.520000e-50 209.0
23 TraesCS4B01G353300 chr4D 100.000 29 0 0 13 41 499260810 499260782 1.000000e-03 54.7
24 TraesCS4B01G353300 chr6B 91.971 274 18 3 45 315 277620316 277620588 5.050000e-102 381.0
25 TraesCS4B01G353300 chr5B 91.606 274 19 3 45 315 684919341 684919069 2.350000e-100 375.0
26 TraesCS4B01G353300 chr3A 91.103 281 19 5 39 315 423678842 423678564 2.350000e-100 375.0
27 TraesCS4B01G353300 chr3A 94.444 36 2 0 6 41 53222848 53222813 3.480000e-04 56.5
28 TraesCS4B01G353300 chr2D 91.606 274 18 4 45 315 304329254 304329525 8.460000e-100 374.0
29 TraesCS4B01G353300 chr2D 87.059 255 28 4 2248 2500 547949579 547949328 1.470000e-72 283.0
30 TraesCS4B01G353300 chr2D 85.938 256 28 6 2255 2504 488315246 488314993 1.480000e-67 267.0
31 TraesCS4B01G353300 chr2D 84.739 249 36 2 2257 2504 183613896 183614143 5.350000e-62 248.0
32 TraesCS4B01G353300 chr4A 91.544 272 19 3 47 315 691149899 691149629 3.040000e-99 372.0
33 TraesCS4B01G353300 chr4A 97.561 41 1 0 1763 1803 440179980 440180020 1.240000e-08 71.3
34 TraesCS4B01G353300 chr1B 91.575 273 18 4 47 315 482197829 482197558 3.040000e-99 372.0
35 TraesCS4B01G353300 chr1A 91.544 272 19 3 47 315 564527658 564527928 3.040000e-99 372.0
36 TraesCS4B01G353300 chr1A 100.000 34 0 0 8 41 238922138 238922105 2.080000e-06 63.9
37 TraesCS4B01G353300 chr1D 88.235 255 24 6 2246 2497 296616995 296617246 1.460000e-77 300.0
38 TraesCS4B01G353300 chr1D 83.846 260 32 8 2252 2504 38522339 38522595 3.220000e-59 239.0
39 TraesCS4B01G353300 chr3D 88.235 255 20 10 2255 2504 241393526 241393775 1.880000e-76 296.0
40 TraesCS4B01G353300 chr3D 94.444 36 2 0 6 41 3058029 3057994 3.480000e-04 56.5
41 TraesCS4B01G353300 chr7D 87.149 249 26 6 2255 2500 598585229 598584984 6.820000e-71 278.0
42 TraesCS4B01G353300 chr7D 84.921 252 36 2 2251 2500 153319398 153319147 1.150000e-63 254.0
43 TraesCS4B01G353300 chr7D 100.000 30 0 0 12 41 198436722 198436693 3.480000e-04 56.5
44 TraesCS4B01G353300 chr5D 97.143 35 1 0 6 40 463039802 463039768 2.690000e-05 60.2
45 TraesCS4B01G353300 chr5D 100.000 31 0 0 11 41 447131567 447131537 9.670000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G353300 chr4B 644878503 644881006 2503 True 4625.000000 4625 100.000000 1 2504 1 chr4B.!!$R2 2503
1 TraesCS4B01G353300 chr4B 644868978 644870253 1275 True 611.000000 920 88.165500 966 2171 2 chr4B.!!$R3 1205
2 TraesCS4B01G353300 chr4B 645054197 645059005 4808 True 339.283333 1147 90.569167 321 2172 6 chr4B.!!$R4 1851
3 TraesCS4B01G353300 chr5A 683201052 683201847 795 False 841.000000 841 85.612000 639 1478 1 chr5A.!!$F2 839
4 TraesCS4B01G353300 chr5A 684315535 684316058 523 True 425.000000 425 81.559000 1076 1594 1 chr5A.!!$R2 518
5 TraesCS4B01G353300 chr5A 683208839 683209387 548 False 279.500000 305 91.334000 1481 2172 2 chr5A.!!$F3 691
6 TraesCS4B01G353300 chr4D 501039423 501040337 914 False 547.500000 793 87.297000 318 1282 2 chr4D.!!$F1 964
7 TraesCS4B01G353300 chr4D 501049331 501053903 4572 False 470.500000 732 87.359500 963 2111 2 chr4D.!!$F2 1148

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
353 354 0.107703 ATGCCATCGGTGTGAATCGT 60.108 50.0 0.0 0.0 0.0 3.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2336 7331 0.108662 GCGAAAATTGGGCTTCTGGG 60.109 55.0 0.0 0.0 0.0 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.494597 GATGCATGTCGAAGCAAATTTG 57.505 40.909 14.03 14.03 44.88 2.32
30 31 3.860717 GCAAATTTGCGGGTCAGC 58.139 55.556 26.15 2.23 45.11 4.26
31 32 2.088178 GCAAATTTGCGGGTCAGCG 61.088 57.895 26.15 0.00 45.11 5.18
32 33 1.285641 CAAATTTGCGGGTCAGCGT 59.714 52.632 5.01 0.00 40.67 5.07
33 34 0.318614 CAAATTTGCGGGTCAGCGTT 60.319 50.000 5.01 0.00 40.67 4.84
34 35 0.318614 AAATTTGCGGGTCAGCGTTG 60.319 50.000 0.00 0.00 40.67 4.10
35 36 2.141122 AATTTGCGGGTCAGCGTTGG 62.141 55.000 0.00 0.00 40.67 3.77
36 37 3.758973 TTTGCGGGTCAGCGTTGGA 62.759 57.895 0.00 0.00 40.67 3.53
37 38 4.680237 TGCGGGTCAGCGTTGGAG 62.680 66.667 0.00 0.00 40.67 3.86
38 39 4.373116 GCGGGTCAGCGTTGGAGA 62.373 66.667 0.00 0.00 0.00 3.71
39 40 2.579201 CGGGTCAGCGTTGGAGAT 59.421 61.111 0.00 0.00 0.00 2.75
40 41 1.811266 CGGGTCAGCGTTGGAGATG 60.811 63.158 0.00 0.00 0.00 2.90
41 42 1.296715 GGGTCAGCGTTGGAGATGT 59.703 57.895 0.00 0.00 0.00 3.06
42 43 1.021390 GGGTCAGCGTTGGAGATGTG 61.021 60.000 0.00 0.00 0.00 3.21
43 44 1.021390 GGTCAGCGTTGGAGATGTGG 61.021 60.000 0.00 0.00 0.00 4.17
44 45 0.320771 GTCAGCGTTGGAGATGTGGT 60.321 55.000 0.00 0.00 0.00 4.16
45 46 0.396435 TCAGCGTTGGAGATGTGGTT 59.604 50.000 0.00 0.00 0.00 3.67
46 47 1.621317 TCAGCGTTGGAGATGTGGTTA 59.379 47.619 0.00 0.00 0.00 2.85
47 48 2.002586 CAGCGTTGGAGATGTGGTTAG 58.997 52.381 0.00 0.00 0.00 2.34
48 49 1.066143 AGCGTTGGAGATGTGGTTAGG 60.066 52.381 0.00 0.00 0.00 2.69
49 50 2.012051 GCGTTGGAGATGTGGTTAGGG 61.012 57.143 0.00 0.00 0.00 3.53
50 51 1.751437 GTTGGAGATGTGGTTAGGGC 58.249 55.000 0.00 0.00 0.00 5.19
51 52 1.004277 GTTGGAGATGTGGTTAGGGCA 59.996 52.381 0.00 0.00 0.00 5.36
52 53 1.595311 TGGAGATGTGGTTAGGGCAT 58.405 50.000 0.00 0.00 0.00 4.40
53 54 1.212688 TGGAGATGTGGTTAGGGCATG 59.787 52.381 0.00 0.00 0.00 4.06
54 55 1.212935 GGAGATGTGGTTAGGGCATGT 59.787 52.381 0.00 0.00 0.00 3.21
55 56 2.438021 GGAGATGTGGTTAGGGCATGTA 59.562 50.000 0.00 0.00 0.00 2.29
56 57 3.467803 GAGATGTGGTTAGGGCATGTAC 58.532 50.000 0.00 0.00 0.00 2.90
57 58 2.843730 AGATGTGGTTAGGGCATGTACA 59.156 45.455 0.00 0.00 0.00 2.90
58 59 3.265737 AGATGTGGTTAGGGCATGTACAA 59.734 43.478 0.00 0.00 0.00 2.41
59 60 3.730215 TGTGGTTAGGGCATGTACAAT 57.270 42.857 0.00 0.00 0.00 2.71
60 61 3.351740 TGTGGTTAGGGCATGTACAATG 58.648 45.455 0.00 0.12 0.00 2.82
61 62 2.687935 GTGGTTAGGGCATGTACAATGG 59.312 50.000 0.00 0.00 0.00 3.16
62 63 2.310349 TGGTTAGGGCATGTACAATGGT 59.690 45.455 0.00 0.00 0.00 3.55
63 64 2.687935 GGTTAGGGCATGTACAATGGTG 59.312 50.000 0.00 0.00 0.00 4.17
64 65 2.051334 TAGGGCATGTACAATGGTGC 57.949 50.000 10.12 10.12 36.88 5.01
65 66 0.332632 AGGGCATGTACAATGGTGCT 59.667 50.000 16.47 0.00 37.70 4.40
66 67 1.563879 AGGGCATGTACAATGGTGCTA 59.436 47.619 16.47 0.00 37.70 3.49
67 68 2.175499 AGGGCATGTACAATGGTGCTAT 59.825 45.455 16.47 5.35 37.70 2.97
68 69 2.554032 GGGCATGTACAATGGTGCTATC 59.446 50.000 16.47 3.12 37.70 2.08
69 70 3.480470 GGCATGTACAATGGTGCTATCT 58.520 45.455 16.47 0.00 37.70 1.98
70 71 3.885297 GGCATGTACAATGGTGCTATCTT 59.115 43.478 16.47 0.00 37.70 2.40
71 72 5.063204 GGCATGTACAATGGTGCTATCTTA 58.937 41.667 16.47 0.00 37.70 2.10
72 73 5.180117 GGCATGTACAATGGTGCTATCTTAG 59.820 44.000 16.47 0.00 37.70 2.18
73 74 5.180117 GCATGTACAATGGTGCTATCTTAGG 59.820 44.000 11.12 0.00 34.85 2.69
74 75 6.524734 CATGTACAATGGTGCTATCTTAGGA 58.475 40.000 0.00 0.00 0.00 2.94
75 76 6.161855 TGTACAATGGTGCTATCTTAGGAG 57.838 41.667 0.00 0.00 0.00 3.69
76 77 5.661312 TGTACAATGGTGCTATCTTAGGAGT 59.339 40.000 0.00 0.00 0.00 3.85
77 78 5.028549 ACAATGGTGCTATCTTAGGAGTG 57.971 43.478 0.00 0.00 0.00 3.51
78 79 3.760580 ATGGTGCTATCTTAGGAGTGC 57.239 47.619 0.00 0.00 0.00 4.40
79 80 2.752030 TGGTGCTATCTTAGGAGTGCT 58.248 47.619 0.00 0.00 0.00 4.40
80 81 3.910989 TGGTGCTATCTTAGGAGTGCTA 58.089 45.455 0.00 0.00 0.00 3.49
81 82 4.483950 TGGTGCTATCTTAGGAGTGCTAT 58.516 43.478 0.00 0.00 0.00 2.97
82 83 4.281941 TGGTGCTATCTTAGGAGTGCTATG 59.718 45.833 0.00 0.00 0.00 2.23
83 84 4.282195 GGTGCTATCTTAGGAGTGCTATGT 59.718 45.833 4.78 0.00 0.00 2.29
84 85 5.477291 GGTGCTATCTTAGGAGTGCTATGTA 59.523 44.000 4.78 0.00 0.00 2.29
85 86 6.349777 GGTGCTATCTTAGGAGTGCTATGTAG 60.350 46.154 4.78 6.97 0.00 2.74
86 87 5.712446 TGCTATCTTAGGAGTGCTATGTAGG 59.288 44.000 4.78 0.00 0.00 3.18
87 88 5.946972 GCTATCTTAGGAGTGCTATGTAGGA 59.053 44.000 4.78 0.00 0.00 2.94
88 89 6.605594 GCTATCTTAGGAGTGCTATGTAGGAT 59.394 42.308 4.78 0.00 0.00 3.24
89 90 7.776030 GCTATCTTAGGAGTGCTATGTAGGATA 59.224 40.741 4.78 0.00 0.00 2.59
90 91 9.688091 CTATCTTAGGAGTGCTATGTAGGATAA 57.312 37.037 4.78 0.00 0.00 1.75
91 92 8.958060 ATCTTAGGAGTGCTATGTAGGATAAA 57.042 34.615 4.78 0.00 0.00 1.40
92 93 8.958060 TCTTAGGAGTGCTATGTAGGATAAAT 57.042 34.615 4.78 0.00 0.00 1.40
93 94 8.807118 TCTTAGGAGTGCTATGTAGGATAAATG 58.193 37.037 4.78 0.00 0.00 2.32
94 95 8.721133 TTAGGAGTGCTATGTAGGATAAATGA 57.279 34.615 0.00 0.00 0.00 2.57
95 96 7.805083 AGGAGTGCTATGTAGGATAAATGAT 57.195 36.000 0.00 0.00 0.00 2.45
96 97 7.619050 AGGAGTGCTATGTAGGATAAATGATG 58.381 38.462 0.00 0.00 0.00 3.07
97 98 7.455953 AGGAGTGCTATGTAGGATAAATGATGA 59.544 37.037 0.00 0.00 0.00 2.92
98 99 7.763528 GGAGTGCTATGTAGGATAAATGATGAG 59.236 40.741 0.00 0.00 0.00 2.90
99 100 7.619050 AGTGCTATGTAGGATAAATGATGAGG 58.381 38.462 0.00 0.00 0.00 3.86
100 101 7.236432 AGTGCTATGTAGGATAAATGATGAGGT 59.764 37.037 0.00 0.00 0.00 3.85
101 102 7.332926 GTGCTATGTAGGATAAATGATGAGGTG 59.667 40.741 0.00 0.00 0.00 4.00
102 103 7.235399 TGCTATGTAGGATAAATGATGAGGTGA 59.765 37.037 0.00 0.00 0.00 4.02
103 104 8.097038 GCTATGTAGGATAAATGATGAGGTGAA 58.903 37.037 0.00 0.00 0.00 3.18
104 105 9.429359 CTATGTAGGATAAATGATGAGGTGAAC 57.571 37.037 0.00 0.00 0.00 3.18
105 106 6.280643 TGTAGGATAAATGATGAGGTGAACG 58.719 40.000 0.00 0.00 0.00 3.95
106 107 5.614324 AGGATAAATGATGAGGTGAACGA 57.386 39.130 0.00 0.00 0.00 3.85
107 108 5.989477 AGGATAAATGATGAGGTGAACGAA 58.011 37.500 0.00 0.00 0.00 3.85
108 109 6.414732 AGGATAAATGATGAGGTGAACGAAA 58.585 36.000 0.00 0.00 0.00 3.46
109 110 6.540189 AGGATAAATGATGAGGTGAACGAAAG 59.460 38.462 0.00 0.00 0.00 2.62
110 111 6.538742 GGATAAATGATGAGGTGAACGAAAGA 59.461 38.462 0.00 0.00 0.00 2.52
111 112 5.869753 AAATGATGAGGTGAACGAAAGAG 57.130 39.130 0.00 0.00 0.00 2.85
112 113 4.808414 ATGATGAGGTGAACGAAAGAGA 57.192 40.909 0.00 0.00 0.00 3.10
113 114 4.600692 TGATGAGGTGAACGAAAGAGAA 57.399 40.909 0.00 0.00 0.00 2.87
114 115 4.307432 TGATGAGGTGAACGAAAGAGAAC 58.693 43.478 0.00 0.00 0.00 3.01
115 116 4.039245 TGATGAGGTGAACGAAAGAGAACT 59.961 41.667 0.00 0.00 0.00 3.01
116 117 3.978687 TGAGGTGAACGAAAGAGAACTC 58.021 45.455 0.00 0.00 0.00 3.01
117 118 3.383505 TGAGGTGAACGAAAGAGAACTCA 59.616 43.478 4.64 0.00 0.00 3.41
118 119 4.039245 TGAGGTGAACGAAAGAGAACTCAT 59.961 41.667 4.64 0.00 0.00 2.90
119 120 5.243060 TGAGGTGAACGAAAGAGAACTCATA 59.757 40.000 4.64 0.00 0.00 2.15
120 121 6.097915 AGGTGAACGAAAGAGAACTCATAA 57.902 37.500 4.64 0.00 0.00 1.90
121 122 6.159988 AGGTGAACGAAAGAGAACTCATAAG 58.840 40.000 4.64 0.00 0.00 1.73
122 123 6.015350 AGGTGAACGAAAGAGAACTCATAAGA 60.015 38.462 4.64 0.00 0.00 2.10
123 124 6.645415 GGTGAACGAAAGAGAACTCATAAGAA 59.355 38.462 4.64 0.00 0.00 2.52
124 125 7.170998 GGTGAACGAAAGAGAACTCATAAGAAA 59.829 37.037 4.64 0.00 0.00 2.52
125 126 8.548721 GTGAACGAAAGAGAACTCATAAGAAAA 58.451 33.333 4.64 0.00 0.00 2.29
126 127 8.765219 TGAACGAAAGAGAACTCATAAGAAAAG 58.235 33.333 4.64 0.00 0.00 2.27
127 128 8.664211 AACGAAAGAGAACTCATAAGAAAAGT 57.336 30.769 4.64 0.00 0.00 2.66
128 129 8.300495 ACGAAAGAGAACTCATAAGAAAAGTC 57.700 34.615 4.64 0.00 0.00 3.01
129 130 8.145122 ACGAAAGAGAACTCATAAGAAAAGTCT 58.855 33.333 4.64 0.00 34.72 3.24
130 131 8.983724 CGAAAGAGAACTCATAAGAAAAGTCTT 58.016 33.333 4.64 0.00 46.18 3.01
132 133 9.620259 AAAGAGAACTCATAAGAAAAGTCTTGT 57.380 29.630 4.64 0.00 44.12 3.16
133 134 8.825667 AGAGAACTCATAAGAAAAGTCTTGTC 57.174 34.615 4.64 0.00 44.12 3.18
134 135 8.646900 AGAGAACTCATAAGAAAAGTCTTGTCT 58.353 33.333 0.00 0.00 44.12 3.41
135 136 8.825667 AGAACTCATAAGAAAAGTCTTGTCTC 57.174 34.615 5.72 0.00 44.12 3.36
136 137 8.646900 AGAACTCATAAGAAAAGTCTTGTCTCT 58.353 33.333 5.72 0.32 44.12 3.10
137 138 8.825667 AACTCATAAGAAAAGTCTTGTCTCTC 57.174 34.615 5.72 0.00 44.12 3.20
138 139 7.957002 ACTCATAAGAAAAGTCTTGTCTCTCA 58.043 34.615 5.72 0.00 44.12 3.27
139 140 8.592809 ACTCATAAGAAAAGTCTTGTCTCTCAT 58.407 33.333 5.72 0.00 44.12 2.90
140 141 9.434420 CTCATAAGAAAAGTCTTGTCTCTCATT 57.566 33.333 5.72 0.00 44.12 2.57
141 142 9.784531 TCATAAGAAAAGTCTTGTCTCTCATTT 57.215 29.630 5.72 0.00 44.12 2.32
145 146 9.620259 AAGAAAAGTCTTGTCTCTCATTTAAGT 57.380 29.630 5.72 0.00 42.73 2.24
146 147 9.050601 AGAAAAGTCTTGTCTCTCATTTAAGTG 57.949 33.333 0.00 0.00 0.00 3.16
147 148 8.964476 AAAAGTCTTGTCTCTCATTTAAGTGA 57.036 30.769 0.34 0.34 0.00 3.41
148 149 8.964476 AAAGTCTTGTCTCTCATTTAAGTGAA 57.036 30.769 2.06 0.00 0.00 3.18
149 150 8.600449 AAGTCTTGTCTCTCATTTAAGTGAAG 57.400 34.615 2.06 3.69 0.00 3.02
150 151 7.957002 AGTCTTGTCTCTCATTTAAGTGAAGA 58.043 34.615 2.06 5.69 0.00 2.87
151 152 7.870445 AGTCTTGTCTCTCATTTAAGTGAAGAC 59.130 37.037 22.13 22.13 37.11 3.01
152 153 7.653713 GTCTTGTCTCTCATTTAAGTGAAGACA 59.346 37.037 24.80 24.80 40.39 3.41
153 154 8.204160 TCTTGTCTCTCATTTAAGTGAAGACAA 58.796 33.333 29.77 29.77 43.66 3.18
154 155 7.953158 TGTCTCTCATTTAAGTGAAGACAAG 57.047 36.000 25.55 11.89 39.88 3.16
155 156 7.726216 TGTCTCTCATTTAAGTGAAGACAAGA 58.274 34.615 25.55 14.14 39.88 3.02
156 157 7.869937 TGTCTCTCATTTAAGTGAAGACAAGAG 59.130 37.037 25.55 17.43 39.88 2.85
157 158 8.085296 GTCTCTCATTTAAGTGAAGACAAGAGA 58.915 37.037 23.01 17.27 36.87 3.10
158 159 8.811017 TCTCTCATTTAAGTGAAGACAAGAGAT 58.189 33.333 9.75 0.00 0.00 2.75
159 160 8.768957 TCTCATTTAAGTGAAGACAAGAGATG 57.231 34.615 2.06 0.00 0.00 2.90
160 161 8.588472 TCTCATTTAAGTGAAGACAAGAGATGA 58.412 33.333 2.06 0.00 0.00 2.92
161 162 9.381033 CTCATTTAAGTGAAGACAAGAGATGAT 57.619 33.333 2.06 0.00 0.00 2.45
162 163 9.376075 TCATTTAAGTGAAGACAAGAGATGATC 57.624 33.333 0.00 0.00 0.00 2.92
163 164 9.381033 CATTTAAGTGAAGACAAGAGATGATCT 57.619 33.333 0.00 0.00 41.27 2.75
164 165 8.994429 TTTAAGTGAAGACAAGAGATGATCTC 57.006 34.615 14.47 14.47 43.70 2.75
184 185 8.526978 TGATCTCTTAGCATAATATGTCTCACC 58.473 37.037 1.92 0.00 0.00 4.02
185 186 7.839680 TCTCTTAGCATAATATGTCTCACCA 57.160 36.000 1.92 0.00 0.00 4.17
186 187 8.427902 TCTCTTAGCATAATATGTCTCACCAT 57.572 34.615 1.92 0.00 0.00 3.55
187 188 9.533831 TCTCTTAGCATAATATGTCTCACCATA 57.466 33.333 1.92 0.00 0.00 2.74
201 202 8.506168 TGTCTCACCATATTTTTAGGAATGAC 57.494 34.615 0.00 0.00 0.00 3.06
202 203 8.328758 TGTCTCACCATATTTTTAGGAATGACT 58.671 33.333 0.00 0.00 0.00 3.41
203 204 9.832445 GTCTCACCATATTTTTAGGAATGACTA 57.168 33.333 0.00 0.00 0.00 2.59
205 206 9.838339 CTCACCATATTTTTAGGAATGACTAGT 57.162 33.333 0.00 0.00 0.00 2.57
232 233 8.845413 ATTGAAGATAATGCTAAGAGATGACC 57.155 34.615 0.00 0.00 0.00 4.02
233 234 6.763355 TGAAGATAATGCTAAGAGATGACCC 58.237 40.000 0.00 0.00 0.00 4.46
234 235 6.327365 TGAAGATAATGCTAAGAGATGACCCA 59.673 38.462 0.00 0.00 0.00 4.51
235 236 6.949117 AGATAATGCTAAGAGATGACCCAT 57.051 37.500 0.00 0.00 0.00 4.00
236 237 7.327064 AGATAATGCTAAGAGATGACCCATT 57.673 36.000 0.00 0.00 0.00 3.16
237 238 7.166851 AGATAATGCTAAGAGATGACCCATTG 58.833 38.462 0.00 0.00 0.00 2.82
238 239 4.785346 ATGCTAAGAGATGACCCATTGT 57.215 40.909 0.00 0.00 0.00 2.71
239 240 5.894298 ATGCTAAGAGATGACCCATTGTA 57.106 39.130 0.00 0.00 0.00 2.41
240 241 5.282055 TGCTAAGAGATGACCCATTGTAG 57.718 43.478 0.00 0.00 0.00 2.74
241 242 4.962362 TGCTAAGAGATGACCCATTGTAGA 59.038 41.667 0.00 0.00 0.00 2.59
242 243 5.163405 TGCTAAGAGATGACCCATTGTAGAC 60.163 44.000 0.00 0.00 0.00 2.59
243 244 5.163405 GCTAAGAGATGACCCATTGTAGACA 60.163 44.000 0.00 0.00 0.00 3.41
244 245 5.762179 AAGAGATGACCCATTGTAGACAA 57.238 39.130 0.00 0.00 40.51 3.18
245 246 5.762179 AGAGATGACCCATTGTAGACAAA 57.238 39.130 0.00 0.00 39.55 2.83
246 247 6.319048 AGAGATGACCCATTGTAGACAAAT 57.681 37.500 0.00 0.00 39.55 2.32
247 248 6.725364 AGAGATGACCCATTGTAGACAAATT 58.275 36.000 0.00 0.00 39.55 1.82
248 249 7.177878 AGAGATGACCCATTGTAGACAAATTT 58.822 34.615 0.00 0.00 39.55 1.82
249 250 8.328758 AGAGATGACCCATTGTAGACAAATTTA 58.671 33.333 0.00 0.00 39.55 1.40
250 251 9.125026 GAGATGACCCATTGTAGACAAATTTAT 57.875 33.333 0.00 0.00 39.55 1.40
251 252 9.479549 AGATGACCCATTGTAGACAAATTTATT 57.520 29.630 0.00 0.00 39.55 1.40
276 277 8.791327 TTGTCATCTCTAAATTACATGCAAGA 57.209 30.769 0.00 0.00 0.00 3.02
277 278 8.201554 TGTCATCTCTAAATTACATGCAAGAC 57.798 34.615 0.00 0.00 0.00 3.01
278 279 8.043113 TGTCATCTCTAAATTACATGCAAGACT 58.957 33.333 0.00 0.00 0.00 3.24
279 280 8.887717 GTCATCTCTAAATTACATGCAAGACTT 58.112 33.333 0.00 0.00 0.00 3.01
291 292 9.944376 TTACATGCAAGACTTAAAGATAAGACT 57.056 29.630 0.00 0.00 43.06 3.24
292 293 8.261492 ACATGCAAGACTTAAAGATAAGACTG 57.739 34.615 0.00 0.00 41.28 3.51
293 294 7.880195 ACATGCAAGACTTAAAGATAAGACTGT 59.120 33.333 0.00 0.00 41.28 3.55
294 295 7.891183 TGCAAGACTTAAAGATAAGACTGTC 57.109 36.000 0.00 0.00 41.28 3.51
295 296 7.671302 TGCAAGACTTAAAGATAAGACTGTCT 58.329 34.615 4.06 4.06 41.28 3.41
296 297 8.150945 TGCAAGACTTAAAGATAAGACTGTCTT 58.849 33.333 24.80 24.80 41.28 3.01
297 298 9.640963 GCAAGACTTAAAGATAAGACTGTCTTA 57.359 33.333 27.13 27.13 41.28 2.10
312 313 9.896645 AAGACTGTCTTATCAATCATTGTACAT 57.103 29.630 20.85 0.00 34.42 2.29
313 314 9.322773 AGACTGTCTTATCAATCATTGTACATG 57.677 33.333 4.06 0.00 0.00 3.21
314 315 7.923888 ACTGTCTTATCAATCATTGTACATGC 58.076 34.615 0.00 0.00 0.00 4.06
315 316 7.553760 ACTGTCTTATCAATCATTGTACATGCA 59.446 33.333 0.00 0.00 0.00 3.96
316 317 8.454570 TGTCTTATCAATCATTGTACATGCAT 57.545 30.769 0.00 0.00 0.00 3.96
319 320 5.784578 ATCAATCATTGTACATGCATGCT 57.215 34.783 26.53 15.56 0.00 3.79
329 330 4.704057 TGTACATGCATGCTATGTCCAAAA 59.296 37.500 27.65 14.69 39.36 2.44
330 331 4.114058 ACATGCATGCTATGTCCAAAAC 57.886 40.909 26.53 0.00 33.72 2.43
331 332 3.765511 ACATGCATGCTATGTCCAAAACT 59.234 39.130 26.53 0.00 33.72 2.66
332 333 4.142315 ACATGCATGCTATGTCCAAAACTC 60.142 41.667 26.53 0.00 33.72 3.01
333 334 3.689347 TGCATGCTATGTCCAAAACTCT 58.311 40.909 20.33 0.00 0.00 3.24
339 340 4.199310 GCTATGTCCAAAACTCTATGCCA 58.801 43.478 0.00 0.00 0.00 4.92
341 342 5.049129 GCTATGTCCAAAACTCTATGCCATC 60.049 44.000 0.00 0.00 0.00 3.51
353 354 0.107703 ATGCCATCGGTGTGAATCGT 60.108 50.000 0.00 0.00 0.00 3.73
373 374 1.839994 TCCTGCTTAGGGACAATCCAG 59.160 52.381 0.00 0.00 38.64 3.86
381 382 3.983044 AGGGACAATCCAGAACTACAC 57.017 47.619 0.00 0.00 38.64 2.90
442 443 5.163077 ACCCTCCGACTTGAAGAGAGATATA 60.163 44.000 0.00 0.00 0.00 0.86
466 467 0.979709 TGGGCCTCCTGAGTGATCAG 60.980 60.000 4.53 0.00 37.48 2.90
467 468 0.689080 GGGCCTCCTGAGTGATCAGA 60.689 60.000 0.84 0.00 39.99 3.27
469 470 1.344114 GGCCTCCTGAGTGATCAGATC 59.656 57.143 3.11 3.11 39.99 2.75
470 471 2.037901 GCCTCCTGAGTGATCAGATCA 58.962 52.381 9.21 9.21 39.99 2.92
471 472 2.036217 GCCTCCTGAGTGATCAGATCAG 59.964 54.545 22.69 22.69 40.53 2.90
472 473 3.298619 CCTCCTGAGTGATCAGATCAGT 58.701 50.000 25.44 19.18 45.25 3.41
504 507 0.543749 GAGACTGCTGGCTATGGGTT 59.456 55.000 0.00 0.00 0.00 4.11
537 543 7.783090 TCAAGAATTTGTATCATGAGAGAGC 57.217 36.000 0.09 0.00 35.73 4.09
539 545 5.295950 AGAATTTGTATCATGAGAGAGCGG 58.704 41.667 0.09 0.00 0.00 5.52
556 568 2.407210 GAGAGAGAGCGAGCACCG 59.593 66.667 0.00 0.00 42.21 4.94
589 601 5.869753 AGTAATCACATTGAGCTTCACAC 57.130 39.130 0.00 0.00 0.00 3.82
596 608 6.463360 TCACATTGAGCTTCACACTGTATTA 58.537 36.000 0.00 0.00 31.78 0.98
597 609 6.591448 TCACATTGAGCTTCACACTGTATTAG 59.409 38.462 0.00 0.00 31.78 1.73
598 610 6.369890 CACATTGAGCTTCACACTGTATTAGT 59.630 38.462 0.00 0.00 41.36 2.24
599 611 6.591834 ACATTGAGCTTCACACTGTATTAGTC 59.408 38.462 0.00 0.00 37.60 2.59
600 612 4.733850 TGAGCTTCACACTGTATTAGTCG 58.266 43.478 0.00 0.00 37.60 4.18
601 613 4.457949 TGAGCTTCACACTGTATTAGTCGA 59.542 41.667 0.00 0.00 37.60 4.20
602 614 5.125578 TGAGCTTCACACTGTATTAGTCGAT 59.874 40.000 0.00 0.00 37.60 3.59
603 615 5.967088 AGCTTCACACTGTATTAGTCGATT 58.033 37.500 0.00 0.00 37.60 3.34
604 616 6.398918 AGCTTCACACTGTATTAGTCGATTT 58.601 36.000 0.00 0.00 37.60 2.17
605 617 6.531948 AGCTTCACACTGTATTAGTCGATTTC 59.468 38.462 0.00 0.00 37.60 2.17
606 618 6.531948 GCTTCACACTGTATTAGTCGATTTCT 59.468 38.462 0.00 0.00 37.60 2.52
607 619 7.463383 GCTTCACACTGTATTAGTCGATTTCTG 60.463 40.741 0.00 0.00 37.60 3.02
608 620 6.920817 TCACACTGTATTAGTCGATTTCTGT 58.079 36.000 0.00 0.00 37.60 3.41
609 621 7.375834 TCACACTGTATTAGTCGATTTCTGTT 58.624 34.615 0.00 0.00 37.60 3.16
610 622 7.870954 TCACACTGTATTAGTCGATTTCTGTTT 59.129 33.333 0.00 0.00 37.60 2.83
611 623 8.495949 CACACTGTATTAGTCGATTTCTGTTTT 58.504 33.333 0.00 0.00 37.60 2.43
612 624 8.495949 ACACTGTATTAGTCGATTTCTGTTTTG 58.504 33.333 0.00 0.00 37.60 2.44
613 625 8.495949 CACTGTATTAGTCGATTTCTGTTTTGT 58.504 33.333 0.00 0.00 37.60 2.83
614 626 9.052759 ACTGTATTAGTCGATTTCTGTTTTGTT 57.947 29.630 0.00 0.00 33.17 2.83
615 627 9.878599 CTGTATTAGTCGATTTCTGTTTTGTTT 57.121 29.630 0.00 0.00 0.00 2.83
657 669 7.095355 GCGAGGAAGTCTATTTCTGTTTTAACA 60.095 37.037 0.00 0.00 37.37 2.41
675 687 2.014128 ACACCAACTTGAAAGGACACG 58.986 47.619 0.00 0.00 0.00 4.49
685 697 3.653344 TGAAAGGACACGAGATGAACAG 58.347 45.455 0.00 0.00 0.00 3.16
741 754 1.143684 AGCAGAGCAAGGAAAGGACAA 59.856 47.619 0.00 0.00 0.00 3.18
743 756 2.575532 CAGAGCAAGGAAAGGACAACA 58.424 47.619 0.00 0.00 0.00 3.33
809 822 2.556792 CTGTCTCGCAGTCGTCGT 59.443 61.111 0.00 0.00 40.27 4.34
815 828 2.276493 CGCAGTCGTCGTACTCGG 60.276 66.667 7.30 0.00 37.69 4.63
853 866 0.451783 CCCGTACCTCAAGCATTTGC 59.548 55.000 0.00 0.00 42.49 3.68
905 918 4.097892 TCCTTTTGTTTCAGCCAGAAGAAC 59.902 41.667 0.00 0.00 37.57 3.01
908 921 4.637483 TTGTTTCAGCCAGAAGAACAAG 57.363 40.909 0.00 0.00 33.97 3.16
909 922 2.951642 TGTTTCAGCCAGAAGAACAAGG 59.048 45.455 0.00 0.00 37.57 3.61
910 923 2.952310 GTTTCAGCCAGAAGAACAAGGT 59.048 45.455 0.00 0.00 37.57 3.50
911 924 4.134563 GTTTCAGCCAGAAGAACAAGGTA 58.865 43.478 0.00 0.00 37.57 3.08
912 925 3.402628 TCAGCCAGAAGAACAAGGTAC 57.597 47.619 0.00 0.00 0.00 3.34
913 926 4.141482 TTTCAGCCAGAAGAACAAGGTACT 60.141 41.667 0.00 0.00 37.81 2.73
914 927 3.070018 CAGCCAGAAGAACAAGGTACTG 58.930 50.000 0.00 0.00 40.86 2.74
1119 1157 1.164041 CGTTGTTCCCGTGCCTCTTT 61.164 55.000 0.00 0.00 0.00 2.52
1131 1169 0.951558 GCCTCTTTTGCGACAGGAAA 59.048 50.000 0.00 0.00 35.87 3.13
1220 1265 4.261781 CTACGTCTACGGCCGCCC 62.262 72.222 28.58 9.61 44.95 6.13
1331 1379 2.990479 GCCCCTCCATGTCGTTCT 59.010 61.111 0.00 0.00 0.00 3.01
1483 1534 1.985662 AACACCGGCGTAGGGATCA 60.986 57.895 6.01 0.00 35.02 2.92
1591 1644 7.936301 GCCTTTATCAATCTATCTTCTGAAGGT 59.064 37.037 16.83 12.81 33.19 3.50
1660 1725 7.309438 GCCTTTATTTCTTCAGACTGATGGTTT 60.309 37.037 16.08 6.01 0.00 3.27
1670 1735 4.460382 CAGACTGATGGTTTGTTGCCTTAT 59.540 41.667 0.00 0.00 0.00 1.73
1682 1761 3.193267 TGTTGCCTTATTCAAGCATGACC 59.807 43.478 0.00 0.00 34.61 4.02
1683 1762 3.370840 TGCCTTATTCAAGCATGACCT 57.629 42.857 0.00 0.00 34.61 3.85
1699 1778 5.765182 GCATGACCTACTTGCCATACTATTT 59.235 40.000 0.00 0.00 41.72 1.40
1774 1856 8.697507 ATGATTGGTTCATAAATACTCCTTCC 57.302 34.615 0.00 0.00 43.43 3.46
1775 1857 6.765989 TGATTGGTTCATAAATACTCCTTCCG 59.234 38.462 0.00 0.00 0.00 4.30
1776 1858 5.687166 TGGTTCATAAATACTCCTTCCGT 57.313 39.130 0.00 0.00 0.00 4.69
1777 1859 6.795144 TGGTTCATAAATACTCCTTCCGTA 57.205 37.500 0.00 0.00 0.00 4.02
1778 1860 7.185318 TGGTTCATAAATACTCCTTCCGTAA 57.815 36.000 0.00 0.00 0.00 3.18
1779 1861 7.622713 TGGTTCATAAATACTCCTTCCGTAAA 58.377 34.615 0.00 0.00 0.00 2.01
1780 1862 8.269317 TGGTTCATAAATACTCCTTCCGTAAAT 58.731 33.333 0.00 0.00 0.00 1.40
1781 1863 9.117183 GGTTCATAAATACTCCTTCCGTAAATT 57.883 33.333 0.00 0.00 0.00 1.82
1792 1874 9.708092 ACTCCTTCCGTAAATTAATATAAGAGC 57.292 33.333 0.00 0.00 0.00 4.09
1793 1875 8.752766 TCCTTCCGTAAATTAATATAAGAGCG 57.247 34.615 0.00 0.00 0.00 5.03
1794 1876 8.362639 TCCTTCCGTAAATTAATATAAGAGCGT 58.637 33.333 0.00 0.00 0.00 5.07
1795 1877 8.985805 CCTTCCGTAAATTAATATAAGAGCGTT 58.014 33.333 0.00 0.00 0.00 4.84
1797 1879 9.531942 TTCCGTAAATTAATATAAGAGCGTTCA 57.468 29.630 1.01 0.00 0.00 3.18
1798 1880 9.188588 TCCGTAAATTAATATAAGAGCGTTCAG 57.811 33.333 1.01 0.00 0.00 3.02
1799 1881 9.188588 CCGTAAATTAATATAAGAGCGTTCAGA 57.811 33.333 1.01 0.00 0.00 3.27
1810 1892 3.383185 AGAGCGTTCAGAATAAGAGGGAG 59.617 47.826 1.01 0.00 0.00 4.30
1823 1908 9.890915 AGAATAAGAGGGAGTAATATCTCAACT 57.109 33.333 0.00 0.00 36.30 3.16
1826 1911 7.741554 AAGAGGGAGTAATATCTCAACTTGT 57.258 36.000 0.00 0.00 36.30 3.16
1829 1914 9.268282 AGAGGGAGTAATATCTCAACTTGTTTA 57.732 33.333 0.00 0.00 36.30 2.01
1877 3766 5.409826 GTCCAACATTAGAGTAGGCATATGC 59.590 44.000 19.79 19.79 41.14 3.14
1879 3768 5.764686 CCAACATTAGAGTAGGCATATGCAA 59.235 40.000 28.07 13.51 44.36 4.08
1880 3769 6.072838 CCAACATTAGAGTAGGCATATGCAAG 60.073 42.308 28.07 5.64 44.36 4.01
1881 3770 5.555017 ACATTAGAGTAGGCATATGCAAGG 58.445 41.667 28.07 15.68 44.36 3.61
1882 3771 5.072329 ACATTAGAGTAGGCATATGCAAGGT 59.928 40.000 28.07 16.28 44.36 3.50
1883 3772 5.630415 TTAGAGTAGGCATATGCAAGGTT 57.370 39.130 28.07 9.99 44.36 3.50
1884 3773 6.740944 TTAGAGTAGGCATATGCAAGGTTA 57.259 37.500 28.07 10.71 44.36 2.85
1885 3774 4.962155 AGAGTAGGCATATGCAAGGTTAC 58.038 43.478 28.07 19.15 44.36 2.50
1886 3775 4.065789 GAGTAGGCATATGCAAGGTTACC 58.934 47.826 28.07 8.95 44.36 2.85
1887 3776 1.967319 AGGCATATGCAAGGTTACCG 58.033 50.000 28.07 0.00 44.36 4.02
1888 3777 1.488812 AGGCATATGCAAGGTTACCGA 59.511 47.619 28.07 0.00 44.36 4.69
1889 3778 1.873591 GGCATATGCAAGGTTACCGAG 59.126 52.381 28.07 0.00 44.36 4.63
1890 3779 1.873591 GCATATGCAAGGTTACCGAGG 59.126 52.381 22.84 0.00 41.59 4.63
1891 3780 2.484770 GCATATGCAAGGTTACCGAGGA 60.485 50.000 22.84 0.00 41.59 3.71
1892 3781 2.973694 TATGCAAGGTTACCGAGGAC 57.026 50.000 0.00 0.00 0.00 3.85
1893 3782 0.981183 ATGCAAGGTTACCGAGGACA 59.019 50.000 0.00 0.00 0.00 4.02
1894 3783 0.981183 TGCAAGGTTACCGAGGACAT 59.019 50.000 0.00 0.00 0.00 3.06
1896 3785 1.369625 CAAGGTTACCGAGGACATGC 58.630 55.000 0.00 0.00 0.00 4.06
1897 3786 0.981183 AAGGTTACCGAGGACATGCA 59.019 50.000 0.00 0.00 0.00 3.96
1898 3787 1.204146 AGGTTACCGAGGACATGCAT 58.796 50.000 0.00 0.00 0.00 3.96
1899 3788 2.394632 AGGTTACCGAGGACATGCATA 58.605 47.619 0.00 0.00 0.00 3.14
1900 3789 2.972713 AGGTTACCGAGGACATGCATAT 59.027 45.455 0.00 0.00 0.00 1.78
1901 3790 3.067106 GGTTACCGAGGACATGCATATG 58.933 50.000 0.00 0.00 40.24 1.78
1902 3791 2.455674 TACCGAGGACATGCATATGC 57.544 50.000 21.09 21.09 37.85 3.14
1915 3804 0.110688 CATATGCGTTCAATCGGGCG 60.111 55.000 0.00 0.00 0.00 6.13
1919 3808 4.499023 CGTTCAATCGGGCGCACG 62.499 66.667 29.51 29.51 0.00 5.34
1920 3809 4.160635 GTTCAATCGGGCGCACGG 62.161 66.667 34.16 17.10 0.00 4.94
1973 6938 8.151596 ACTTTCTTAATAAGATAGGTGGCTAGC 58.848 37.037 19.53 6.04 39.83 3.42
1975 6940 6.008331 TCTTAATAAGATAGGTGGCTAGCGA 58.992 40.000 9.00 0.68 31.20 4.93
1987 6952 1.287425 GCTAGCGAATTTGTACGGCT 58.713 50.000 0.00 0.00 0.00 5.52
2024 6989 8.742777 ACACATTGCTGTAACTAATCATCAATT 58.257 29.630 0.00 0.00 31.15 2.32
2046 7013 2.408271 TGCATCTGAGGGCTAGTTTG 57.592 50.000 5.81 0.00 0.00 2.93
2055 7022 1.757699 AGGGCTAGTTTGATCTCGGTC 59.242 52.381 0.00 0.00 0.00 4.79
2143 7113 4.354893 TTCCGTGGTTACCAACTTACAT 57.645 40.909 5.33 0.00 34.18 2.29
2155 7125 8.870879 GTTACCAACTTACATGTAGAACATCTC 58.129 37.037 5.56 0.00 36.53 2.75
2186 7156 6.099159 AGGAACTTGGTAGAACTAAGTCAC 57.901 41.667 8.92 5.90 46.99 3.67
2187 7157 4.922103 GGAACTTGGTAGAACTAAGTCACG 59.078 45.833 8.92 0.00 46.99 4.35
2189 7159 5.779529 ACTTGGTAGAACTAAGTCACGAA 57.220 39.130 3.29 0.00 45.00 3.85
2190 7160 5.527033 ACTTGGTAGAACTAAGTCACGAAC 58.473 41.667 3.29 0.00 45.00 3.95
2193 7187 5.316167 TGGTAGAACTAAGTCACGAACCTA 58.684 41.667 0.00 0.00 0.00 3.08
2201 7195 7.417496 ACTAAGTCACGAACCTAATGTTTTC 57.583 36.000 0.00 0.00 37.29 2.29
2202 7196 4.985044 AGTCACGAACCTAATGTTTTCG 57.015 40.909 0.00 1.62 45.96 3.46
2206 7200 6.204108 AGTCACGAACCTAATGTTTTCGATTT 59.796 34.615 9.73 0.00 43.83 2.17
2211 7205 8.508875 ACGAACCTAATGTTTTCGATTTGTAAT 58.491 29.630 9.73 0.00 43.83 1.89
2237 7232 7.294676 AGATTTTCAGTTTTCAACTTTGCAC 57.705 32.000 0.00 0.00 40.46 4.57
2244 7239 4.627035 AGTTTTCAACTTTGCACTGCTTTC 59.373 37.500 1.98 0.00 39.04 2.62
2251 7246 5.619625 ACTTTGCACTGCTTTCTTAGATC 57.380 39.130 1.98 0.00 0.00 2.75
2252 7247 5.312079 ACTTTGCACTGCTTTCTTAGATCT 58.688 37.500 0.00 0.00 0.00 2.75
2254 7249 6.936900 ACTTTGCACTGCTTTCTTAGATCTTA 59.063 34.615 0.00 0.00 0.00 2.10
2255 7250 6.974932 TTGCACTGCTTTCTTAGATCTTAG 57.025 37.500 0.00 0.26 0.00 2.18
2256 7251 6.286240 TGCACTGCTTTCTTAGATCTTAGA 57.714 37.500 7.35 7.35 0.00 2.10
2257 7252 6.336566 TGCACTGCTTTCTTAGATCTTAGAG 58.663 40.000 11.05 3.12 0.00 2.43
2258 7253 5.234116 GCACTGCTTTCTTAGATCTTAGAGC 59.766 44.000 11.05 12.31 0.00 4.09
2259 7254 6.336566 CACTGCTTTCTTAGATCTTAGAGCA 58.663 40.000 18.87 18.87 0.00 4.26
2260 7255 6.985645 CACTGCTTTCTTAGATCTTAGAGCAT 59.014 38.462 19.76 11.29 0.00 3.79
2261 7256 7.169645 CACTGCTTTCTTAGATCTTAGAGCATC 59.830 40.741 19.76 9.40 0.00 3.91
2314 7309 2.629210 TTTTTGTCGCCGACGCTG 59.371 55.556 13.18 0.00 39.84 5.18
2315 7310 1.883544 TTTTTGTCGCCGACGCTGA 60.884 52.632 13.18 0.00 39.84 4.26
2316 7311 1.429927 TTTTTGTCGCCGACGCTGAA 61.430 50.000 13.18 0.00 39.84 3.02
2318 7313 1.429927 TTTGTCGCCGACGCTGAAAA 61.430 50.000 13.18 4.21 39.84 2.29
2320 7315 1.225376 TGTCGCCGACGCTGAAAATT 61.225 50.000 13.18 0.00 39.84 1.82
2321 7316 0.518559 GTCGCCGACGCTGAAAATTC 60.519 55.000 0.00 0.00 39.84 2.17
2330 7325 1.512694 CTGAAAATTCGGCCCAGCC 59.487 57.895 0.00 0.00 46.75 4.85
2350 7345 2.039462 GCCCCCAGAAGCCCAATT 59.961 61.111 0.00 0.00 0.00 2.32
2352 7347 1.200760 GCCCCCAGAAGCCCAATTTT 61.201 55.000 0.00 0.00 0.00 1.82
2353 7348 0.904649 CCCCCAGAAGCCCAATTTTC 59.095 55.000 0.00 0.00 0.00 2.29
2354 7349 0.532115 CCCCAGAAGCCCAATTTTCG 59.468 55.000 0.00 0.00 0.00 3.46
2355 7350 0.108662 CCCAGAAGCCCAATTTTCGC 60.109 55.000 0.00 0.00 0.00 4.70
2356 7351 0.456653 CCAGAAGCCCAATTTTCGCG 60.457 55.000 0.00 0.00 0.00 5.87
2357 7352 0.456653 CAGAAGCCCAATTTTCGCGG 60.457 55.000 6.13 0.00 0.00 6.46
2358 7353 1.805539 GAAGCCCAATTTTCGCGGC 60.806 57.895 6.13 0.00 41.96 6.53
2359 7354 2.676471 AGCCCAATTTTCGCGGCT 60.676 55.556 6.13 0.32 46.96 5.52
2360 7355 2.261361 GCCCAATTTTCGCGGCTT 59.739 55.556 6.13 0.00 38.41 4.35
2361 7356 2.094066 GCCCAATTTTCGCGGCTTG 61.094 57.895 6.13 5.12 38.41 4.01
2362 7357 1.445926 CCCAATTTTCGCGGCTTGG 60.446 57.895 6.13 13.77 38.28 3.61
2363 7358 1.445926 CCAATTTTCGCGGCTTGGG 60.446 57.895 6.13 0.00 35.54 4.12
2364 7359 2.094066 CAATTTTCGCGGCTTGGGC 61.094 57.895 6.13 0.00 37.82 5.36
2383 7378 3.439540 GATTTTGGCGCCGGCAGA 61.440 61.111 28.98 6.62 42.47 4.26
2384 7379 3.683587 GATTTTGGCGCCGGCAGAC 62.684 63.158 28.98 21.80 42.47 3.51
2395 7390 4.554036 GGCAGACCCAGGCCGATC 62.554 72.222 0.00 0.00 40.93 3.69
2396 7391 4.554036 GCAGACCCAGGCCGATCC 62.554 72.222 0.00 0.00 0.00 3.36
2428 7423 2.340328 GCGCCGGGGAAACAGAATT 61.340 57.895 24.68 0.00 0.00 2.17
2429 7424 1.873270 GCGCCGGGGAAACAGAATTT 61.873 55.000 24.68 0.00 0.00 1.82
2430 7425 0.109319 CGCCGGGGAAACAGAATTTG 60.109 55.000 14.46 0.00 0.00 2.32
2432 7427 0.246360 CCGGGGAAACAGAATTTGGC 59.754 55.000 0.00 0.00 0.00 4.52
2433 7428 0.109319 CGGGGAAACAGAATTTGGCG 60.109 55.000 0.00 0.00 0.00 5.69
2434 7429 0.389817 GGGGAAACAGAATTTGGCGC 60.390 55.000 0.00 0.00 0.00 6.53
2435 7430 0.732538 GGGAAACAGAATTTGGCGCG 60.733 55.000 0.00 0.00 0.00 6.86
2436 7431 0.239879 GGAAACAGAATTTGGCGCGA 59.760 50.000 12.10 0.00 0.00 5.87
2438 7433 1.713932 GAAACAGAATTTGGCGCGAAC 59.286 47.619 12.10 1.21 0.00 3.95
2439 7434 0.665835 AACAGAATTTGGCGCGAACA 59.334 45.000 12.10 4.70 0.00 3.18
2440 7435 0.238289 ACAGAATTTGGCGCGAACAG 59.762 50.000 12.10 0.00 0.00 3.16
2441 7436 0.454957 CAGAATTTGGCGCGAACAGG 60.455 55.000 12.10 0.00 0.00 4.00
2442 7437 0.605319 AGAATTTGGCGCGAACAGGA 60.605 50.000 12.10 0.91 0.00 3.86
2444 7439 0.887933 AATTTGGCGCGAACAGGATT 59.112 45.000 12.10 9.35 0.00 3.01
2446 7441 1.861542 TTTGGCGCGAACAGGATTGG 61.862 55.000 12.10 0.00 0.00 3.16
2447 7442 3.508840 GGCGCGAACAGGATTGGG 61.509 66.667 12.10 0.00 0.00 4.12
2449 7444 2.332654 GCGCGAACAGGATTGGGTT 61.333 57.895 12.10 0.00 0.00 4.11
2451 7446 0.673644 CGCGAACAGGATTGGGTTCT 60.674 55.000 0.00 0.00 40.88 3.01
2453 7448 1.739067 CGAACAGGATTGGGTTCTCC 58.261 55.000 0.00 0.00 40.88 3.71
2454 7449 1.739067 GAACAGGATTGGGTTCTCCG 58.261 55.000 0.00 0.00 40.12 4.63
2456 7451 0.905357 ACAGGATTGGGTTCTCCGAG 59.095 55.000 0.00 0.00 38.76 4.63
2460 7455 1.134670 GGATTGGGTTCTCCGAGTCAG 60.135 57.143 0.00 0.00 38.76 3.51
2461 7456 0.250513 ATTGGGTTCTCCGAGTCAGC 59.749 55.000 0.00 0.00 38.76 4.26
2462 7457 2.154798 TTGGGTTCTCCGAGTCAGCG 62.155 60.000 0.00 0.00 38.76 5.18
2463 7458 2.341101 GGGTTCTCCGAGTCAGCGA 61.341 63.158 0.00 0.00 33.83 4.93
2464 7459 1.153997 GGTTCTCCGAGTCAGCGAC 60.154 63.158 0.00 1.15 0.00 5.19
2486 7481 2.490217 CGCCTTCGTCGTCCTCAT 59.510 61.111 0.00 0.00 0.00 2.90
2487 7482 1.586564 CGCCTTCGTCGTCCTCATC 60.587 63.158 0.00 0.00 0.00 2.92
2488 7483 1.586564 GCCTTCGTCGTCCTCATCG 60.587 63.158 0.00 0.00 0.00 3.84
2489 7484 1.586564 CCTTCGTCGTCCTCATCGC 60.587 63.158 0.00 0.00 0.00 4.58
2491 7486 2.579241 CTTCGTCGTCCTCATCGCGT 62.579 60.000 5.77 0.00 32.94 6.01
2492 7487 2.573341 TTCGTCGTCCTCATCGCGTC 62.573 60.000 5.77 0.00 32.94 5.19
2494 7489 1.583967 GTCGTCCTCATCGCGTCAG 60.584 63.158 5.77 0.00 0.00 3.51
2495 7490 2.038837 TCGTCCTCATCGCGTCAGT 61.039 57.895 5.77 0.00 0.00 3.41
2496 7491 1.154016 CGTCCTCATCGCGTCAGTT 60.154 57.895 5.77 0.00 0.00 3.16
2497 7492 1.134530 CGTCCTCATCGCGTCAGTTC 61.135 60.000 5.77 0.00 0.00 3.01
2498 7493 0.802607 GTCCTCATCGCGTCAGTTCC 60.803 60.000 5.77 0.00 0.00 3.62
2499 7494 1.519455 CCTCATCGCGTCAGTTCCC 60.519 63.158 5.77 0.00 0.00 3.97
2501 7496 1.078759 CTCATCGCGTCAGTTCCCAC 61.079 60.000 5.77 0.00 0.00 4.61
2503 7498 3.642778 ATCGCGTCAGTTCCCACGG 62.643 63.158 5.77 0.00 36.50 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 0.318614 AACGCTGACCCGCAAATTTG 60.319 50.000 14.03 14.03 0.00 2.32
15 16 0.318614 CAACGCTGACCCGCAAATTT 60.319 50.000 0.00 0.00 0.00 1.82
16 17 1.285641 CAACGCTGACCCGCAAATT 59.714 52.632 0.00 0.00 0.00 1.82
17 18 2.625823 CCAACGCTGACCCGCAAAT 61.626 57.895 0.00 0.00 0.00 2.32
18 19 3.283684 CCAACGCTGACCCGCAAA 61.284 61.111 0.00 0.00 0.00 3.68
19 20 4.243008 TCCAACGCTGACCCGCAA 62.243 61.111 0.00 0.00 0.00 4.85
20 21 4.680237 CTCCAACGCTGACCCGCA 62.680 66.667 0.00 0.00 0.00 5.69
21 22 3.665675 ATCTCCAACGCTGACCCGC 62.666 63.158 0.00 0.00 0.00 6.13
22 23 1.811266 CATCTCCAACGCTGACCCG 60.811 63.158 0.00 0.00 0.00 5.28
23 24 1.021390 CACATCTCCAACGCTGACCC 61.021 60.000 0.00 0.00 0.00 4.46
24 25 1.021390 CCACATCTCCAACGCTGACC 61.021 60.000 0.00 0.00 0.00 4.02
25 26 0.320771 ACCACATCTCCAACGCTGAC 60.321 55.000 0.00 0.00 0.00 3.51
26 27 0.396435 AACCACATCTCCAACGCTGA 59.604 50.000 0.00 0.00 0.00 4.26
27 28 2.002586 CTAACCACATCTCCAACGCTG 58.997 52.381 0.00 0.00 0.00 5.18
28 29 1.066143 CCTAACCACATCTCCAACGCT 60.066 52.381 0.00 0.00 0.00 5.07
29 30 1.369625 CCTAACCACATCTCCAACGC 58.630 55.000 0.00 0.00 0.00 4.84
30 31 2.012051 GCCCTAACCACATCTCCAACG 61.012 57.143 0.00 0.00 0.00 4.10
31 32 1.004277 TGCCCTAACCACATCTCCAAC 59.996 52.381 0.00 0.00 0.00 3.77
32 33 1.367346 TGCCCTAACCACATCTCCAA 58.633 50.000 0.00 0.00 0.00 3.53
33 34 1.212688 CATGCCCTAACCACATCTCCA 59.787 52.381 0.00 0.00 0.00 3.86
34 35 1.212935 ACATGCCCTAACCACATCTCC 59.787 52.381 0.00 0.00 0.00 3.71
35 36 2.717639 ACATGCCCTAACCACATCTC 57.282 50.000 0.00 0.00 0.00 2.75
36 37 2.843730 TGTACATGCCCTAACCACATCT 59.156 45.455 0.00 0.00 0.00 2.90
37 38 3.275617 TGTACATGCCCTAACCACATC 57.724 47.619 0.00 0.00 0.00 3.06
38 39 3.730215 TTGTACATGCCCTAACCACAT 57.270 42.857 0.00 0.00 0.00 3.21
39 40 3.351740 CATTGTACATGCCCTAACCACA 58.648 45.455 0.00 0.00 0.00 4.17
40 41 2.687935 CCATTGTACATGCCCTAACCAC 59.312 50.000 0.00 0.00 0.00 4.16
41 42 2.310349 ACCATTGTACATGCCCTAACCA 59.690 45.455 0.00 0.00 0.00 3.67
42 43 2.687935 CACCATTGTACATGCCCTAACC 59.312 50.000 0.00 0.00 0.00 2.85
43 44 2.099098 GCACCATTGTACATGCCCTAAC 59.901 50.000 7.77 0.00 31.71 2.34
44 45 2.025416 AGCACCATTGTACATGCCCTAA 60.025 45.455 14.08 0.00 38.92 2.69
45 46 1.563879 AGCACCATTGTACATGCCCTA 59.436 47.619 14.08 0.00 38.92 3.53
46 47 0.332632 AGCACCATTGTACATGCCCT 59.667 50.000 14.08 0.00 38.92 5.19
47 48 2.051334 TAGCACCATTGTACATGCCC 57.949 50.000 14.08 0.00 38.92 5.36
48 49 3.480470 AGATAGCACCATTGTACATGCC 58.520 45.455 14.08 1.71 38.92 4.40
49 50 5.180117 CCTAAGATAGCACCATTGTACATGC 59.820 44.000 10.53 10.53 38.39 4.06
50 51 6.524734 TCCTAAGATAGCACCATTGTACATG 58.475 40.000 0.00 0.00 0.00 3.21
51 52 6.327626 ACTCCTAAGATAGCACCATTGTACAT 59.672 38.462 0.00 0.00 0.00 2.29
52 53 5.661312 ACTCCTAAGATAGCACCATTGTACA 59.339 40.000 0.00 0.00 0.00 2.90
53 54 5.986135 CACTCCTAAGATAGCACCATTGTAC 59.014 44.000 0.00 0.00 0.00 2.90
54 55 5.453339 GCACTCCTAAGATAGCACCATTGTA 60.453 44.000 0.00 0.00 0.00 2.41
55 56 4.684485 GCACTCCTAAGATAGCACCATTGT 60.684 45.833 0.00 0.00 0.00 2.71
56 57 3.812053 GCACTCCTAAGATAGCACCATTG 59.188 47.826 0.00 0.00 0.00 2.82
57 58 3.713764 AGCACTCCTAAGATAGCACCATT 59.286 43.478 0.00 0.00 0.00 3.16
58 59 3.312890 AGCACTCCTAAGATAGCACCAT 58.687 45.455 0.00 0.00 0.00 3.55
59 60 2.752030 AGCACTCCTAAGATAGCACCA 58.248 47.619 0.00 0.00 0.00 4.17
60 61 4.282195 ACATAGCACTCCTAAGATAGCACC 59.718 45.833 0.00 0.00 0.00 5.01
61 62 5.461032 ACATAGCACTCCTAAGATAGCAC 57.539 43.478 0.00 0.00 0.00 4.40
62 63 5.712446 CCTACATAGCACTCCTAAGATAGCA 59.288 44.000 0.00 0.00 0.00 3.49
63 64 5.946972 TCCTACATAGCACTCCTAAGATAGC 59.053 44.000 0.00 0.00 0.00 2.97
64 65 9.688091 TTATCCTACATAGCACTCCTAAGATAG 57.312 37.037 0.00 0.00 0.00 2.08
66 67 8.958060 TTTATCCTACATAGCACTCCTAAGAT 57.042 34.615 0.00 0.00 0.00 2.40
67 68 8.807118 CATTTATCCTACATAGCACTCCTAAGA 58.193 37.037 0.00 0.00 0.00 2.10
68 69 8.807118 TCATTTATCCTACATAGCACTCCTAAG 58.193 37.037 0.00 0.00 0.00 2.18
69 70 8.721133 TCATTTATCCTACATAGCACTCCTAA 57.279 34.615 0.00 0.00 0.00 2.69
70 71 8.753133 CATCATTTATCCTACATAGCACTCCTA 58.247 37.037 0.00 0.00 0.00 2.94
71 72 7.455953 TCATCATTTATCCTACATAGCACTCCT 59.544 37.037 0.00 0.00 0.00 3.69
72 73 7.615403 TCATCATTTATCCTACATAGCACTCC 58.385 38.462 0.00 0.00 0.00 3.85
73 74 7.763528 CCTCATCATTTATCCTACATAGCACTC 59.236 40.741 0.00 0.00 0.00 3.51
74 75 7.236432 ACCTCATCATTTATCCTACATAGCACT 59.764 37.037 0.00 0.00 0.00 4.40
75 76 7.332926 CACCTCATCATTTATCCTACATAGCAC 59.667 40.741 0.00 0.00 0.00 4.40
76 77 7.235399 TCACCTCATCATTTATCCTACATAGCA 59.765 37.037 0.00 0.00 0.00 3.49
77 78 7.615403 TCACCTCATCATTTATCCTACATAGC 58.385 38.462 0.00 0.00 0.00 2.97
78 79 9.429359 GTTCACCTCATCATTTATCCTACATAG 57.571 37.037 0.00 0.00 0.00 2.23
79 80 8.088365 CGTTCACCTCATCATTTATCCTACATA 58.912 37.037 0.00 0.00 0.00 2.29
80 81 6.931281 CGTTCACCTCATCATTTATCCTACAT 59.069 38.462 0.00 0.00 0.00 2.29
81 82 6.097696 TCGTTCACCTCATCATTTATCCTACA 59.902 38.462 0.00 0.00 0.00 2.74
82 83 6.513180 TCGTTCACCTCATCATTTATCCTAC 58.487 40.000 0.00 0.00 0.00 3.18
83 84 6.724893 TCGTTCACCTCATCATTTATCCTA 57.275 37.500 0.00 0.00 0.00 2.94
84 85 5.614324 TCGTTCACCTCATCATTTATCCT 57.386 39.130 0.00 0.00 0.00 3.24
85 86 6.538742 TCTTTCGTTCACCTCATCATTTATCC 59.461 38.462 0.00 0.00 0.00 2.59
86 87 7.492669 TCTCTTTCGTTCACCTCATCATTTATC 59.507 37.037 0.00 0.00 0.00 1.75
87 88 7.331026 TCTCTTTCGTTCACCTCATCATTTAT 58.669 34.615 0.00 0.00 0.00 1.40
88 89 6.697395 TCTCTTTCGTTCACCTCATCATTTA 58.303 36.000 0.00 0.00 0.00 1.40
89 90 5.551233 TCTCTTTCGTTCACCTCATCATTT 58.449 37.500 0.00 0.00 0.00 2.32
90 91 5.152623 TCTCTTTCGTTCACCTCATCATT 57.847 39.130 0.00 0.00 0.00 2.57
91 92 4.808414 TCTCTTTCGTTCACCTCATCAT 57.192 40.909 0.00 0.00 0.00 2.45
92 93 4.039245 AGTTCTCTTTCGTTCACCTCATCA 59.961 41.667 0.00 0.00 0.00 3.07
93 94 4.561105 AGTTCTCTTTCGTTCACCTCATC 58.439 43.478 0.00 0.00 0.00 2.92
94 95 4.039245 TGAGTTCTCTTTCGTTCACCTCAT 59.961 41.667 1.53 0.00 0.00 2.90
95 96 3.383505 TGAGTTCTCTTTCGTTCACCTCA 59.616 43.478 1.53 0.00 0.00 3.86
96 97 3.978687 TGAGTTCTCTTTCGTTCACCTC 58.021 45.455 1.53 0.00 0.00 3.85
97 98 4.608948 ATGAGTTCTCTTTCGTTCACCT 57.391 40.909 1.53 0.00 0.00 4.00
98 99 6.157211 TCTTATGAGTTCTCTTTCGTTCACC 58.843 40.000 1.53 0.00 0.00 4.02
99 100 7.639162 TTCTTATGAGTTCTCTTTCGTTCAC 57.361 36.000 1.53 0.00 0.00 3.18
100 101 8.657074 TTTTCTTATGAGTTCTCTTTCGTTCA 57.343 30.769 1.53 0.00 0.00 3.18
101 102 8.766151 ACTTTTCTTATGAGTTCTCTTTCGTTC 58.234 33.333 1.53 0.00 0.00 3.95
102 103 8.664211 ACTTTTCTTATGAGTTCTCTTTCGTT 57.336 30.769 1.53 0.00 0.00 3.85
103 104 8.145122 AGACTTTTCTTATGAGTTCTCTTTCGT 58.855 33.333 1.53 0.00 0.00 3.85
104 105 8.527567 AGACTTTTCTTATGAGTTCTCTTTCG 57.472 34.615 1.53 0.00 0.00 3.46
106 107 9.620259 ACAAGACTTTTCTTATGAGTTCTCTTT 57.380 29.630 1.53 0.00 40.34 2.52
107 108 9.267084 GACAAGACTTTTCTTATGAGTTCTCTT 57.733 33.333 1.53 0.00 40.34 2.85
108 109 8.646900 AGACAAGACTTTTCTTATGAGTTCTCT 58.353 33.333 0.00 0.00 40.34 3.10
109 110 8.825667 AGACAAGACTTTTCTTATGAGTTCTC 57.174 34.615 0.00 0.00 40.34 2.87
110 111 8.646900 AGAGACAAGACTTTTCTTATGAGTTCT 58.353 33.333 5.37 0.00 40.34 3.01
111 112 8.825667 AGAGACAAGACTTTTCTTATGAGTTC 57.174 34.615 5.37 0.00 40.34 3.01
112 113 8.424918 TGAGAGACAAGACTTTTCTTATGAGTT 58.575 33.333 5.37 0.00 40.34 3.01
113 114 7.957002 TGAGAGACAAGACTTTTCTTATGAGT 58.043 34.615 5.37 0.00 40.34 3.41
114 115 9.434420 AATGAGAGACAAGACTTTTCTTATGAG 57.566 33.333 5.37 0.00 40.34 2.90
115 116 9.784531 AAATGAGAGACAAGACTTTTCTTATGA 57.215 29.630 5.37 0.00 40.34 2.15
119 120 9.620259 ACTTAAATGAGAGACAAGACTTTTCTT 57.380 29.630 5.37 0.00 43.35 2.52
120 121 9.050601 CACTTAAATGAGAGACAAGACTTTTCT 57.949 33.333 3.48 3.48 0.00 2.52
121 122 9.046296 TCACTTAAATGAGAGACAAGACTTTTC 57.954 33.333 0.00 0.00 0.00 2.29
122 123 8.964476 TCACTTAAATGAGAGACAAGACTTTT 57.036 30.769 0.00 0.00 0.00 2.27
123 124 8.964476 TTCACTTAAATGAGAGACAAGACTTT 57.036 30.769 0.00 0.00 0.00 2.66
124 125 8.424918 TCTTCACTTAAATGAGAGACAAGACTT 58.575 33.333 0.00 0.00 0.00 3.01
125 126 7.870445 GTCTTCACTTAAATGAGAGACAAGACT 59.130 37.037 16.97 0.00 37.07 3.24
126 127 7.653713 TGTCTTCACTTAAATGAGAGACAAGAC 59.346 37.037 19.88 14.20 40.17 3.01
127 128 7.726216 TGTCTTCACTTAAATGAGAGACAAGA 58.274 34.615 19.88 5.10 40.17 3.02
128 129 7.953158 TGTCTTCACTTAAATGAGAGACAAG 57.047 36.000 19.88 3.24 40.17 3.16
129 130 8.204160 TCTTGTCTTCACTTAAATGAGAGACAA 58.796 33.333 25.39 25.39 44.02 3.18
130 131 7.726216 TCTTGTCTTCACTTAAATGAGAGACA 58.274 34.615 19.00 19.00 40.70 3.41
131 132 8.085296 TCTCTTGTCTTCACTTAAATGAGAGAC 58.915 37.037 15.89 15.89 37.32 3.36
132 133 8.183104 TCTCTTGTCTTCACTTAAATGAGAGA 57.817 34.615 0.00 0.00 0.00 3.10
133 134 8.871862 CATCTCTTGTCTTCACTTAAATGAGAG 58.128 37.037 0.00 0.00 31.70 3.20
134 135 8.588472 TCATCTCTTGTCTTCACTTAAATGAGA 58.412 33.333 0.00 0.00 0.00 3.27
135 136 8.768957 TCATCTCTTGTCTTCACTTAAATGAG 57.231 34.615 0.00 0.00 0.00 2.90
136 137 9.376075 GATCATCTCTTGTCTTCACTTAAATGA 57.624 33.333 0.00 0.00 0.00 2.57
137 138 9.381033 AGATCATCTCTTGTCTTCACTTAAATG 57.619 33.333 0.00 0.00 0.00 2.32
138 139 9.598517 GAGATCATCTCTTGTCTTCACTTAAAT 57.401 33.333 7.48 0.00 40.30 1.40
139 140 8.994429 GAGATCATCTCTTGTCTTCACTTAAA 57.006 34.615 7.48 0.00 40.30 1.52
158 159 8.526978 GGTGAGACATATTATGCTAAGAGATCA 58.473 37.037 3.52 0.00 0.00 2.92
159 160 8.526978 TGGTGAGACATATTATGCTAAGAGATC 58.473 37.037 3.52 0.00 0.00 2.75
160 161 8.427902 TGGTGAGACATATTATGCTAAGAGAT 57.572 34.615 3.52 0.00 0.00 2.75
161 162 7.839680 TGGTGAGACATATTATGCTAAGAGA 57.160 36.000 3.52 0.00 0.00 3.10
175 176 9.125026 GTCATTCCTAAAAATATGGTGAGACAT 57.875 33.333 0.00 0.00 34.90 3.06
176 177 8.328758 AGTCATTCCTAAAAATATGGTGAGACA 58.671 33.333 0.00 0.00 0.00 3.41
177 178 8.738645 AGTCATTCCTAAAAATATGGTGAGAC 57.261 34.615 0.00 0.00 0.00 3.36
179 180 9.838339 ACTAGTCATTCCTAAAAATATGGTGAG 57.162 33.333 0.00 0.00 0.00 3.51
206 207 9.935241 GGTCATCTCTTAGCATTATCTTCAATA 57.065 33.333 0.00 0.00 0.00 1.90
207 208 7.882271 GGGTCATCTCTTAGCATTATCTTCAAT 59.118 37.037 0.00 0.00 0.00 2.57
208 209 7.147497 TGGGTCATCTCTTAGCATTATCTTCAA 60.147 37.037 0.00 0.00 0.00 2.69
209 210 6.327365 TGGGTCATCTCTTAGCATTATCTTCA 59.673 38.462 0.00 0.00 0.00 3.02
210 211 6.763355 TGGGTCATCTCTTAGCATTATCTTC 58.237 40.000 0.00 0.00 0.00 2.87
211 212 6.753913 TGGGTCATCTCTTAGCATTATCTT 57.246 37.500 0.00 0.00 0.00 2.40
212 213 6.949117 ATGGGTCATCTCTTAGCATTATCT 57.051 37.500 0.00 0.00 0.00 1.98
213 214 6.939163 ACAATGGGTCATCTCTTAGCATTATC 59.061 38.462 0.00 0.00 0.00 1.75
214 215 6.845908 ACAATGGGTCATCTCTTAGCATTAT 58.154 36.000 0.00 0.00 0.00 1.28
215 216 6.252599 ACAATGGGTCATCTCTTAGCATTA 57.747 37.500 0.00 0.00 0.00 1.90
216 217 5.121380 ACAATGGGTCATCTCTTAGCATT 57.879 39.130 0.00 0.00 0.00 3.56
217 218 4.785346 ACAATGGGTCATCTCTTAGCAT 57.215 40.909 0.00 0.00 0.00 3.79
218 219 4.962362 TCTACAATGGGTCATCTCTTAGCA 59.038 41.667 0.00 0.00 0.00 3.49
219 220 5.163405 TGTCTACAATGGGTCATCTCTTAGC 60.163 44.000 0.00 0.00 0.00 3.09
220 221 6.471233 TGTCTACAATGGGTCATCTCTTAG 57.529 41.667 0.00 0.00 0.00 2.18
221 222 6.867519 TTGTCTACAATGGGTCATCTCTTA 57.132 37.500 0.00 0.00 0.00 2.10
222 223 5.762179 TTGTCTACAATGGGTCATCTCTT 57.238 39.130 0.00 0.00 0.00 2.85
223 224 5.762179 TTTGTCTACAATGGGTCATCTCT 57.238 39.130 0.00 0.00 35.55 3.10
224 225 7.396540 AAATTTGTCTACAATGGGTCATCTC 57.603 36.000 0.00 0.00 35.55 2.75
225 226 9.479549 AATAAATTTGTCTACAATGGGTCATCT 57.520 29.630 0.00 0.00 35.55 2.90
227 228 9.874205 CAAATAAATTTGTCTACAATGGGTCAT 57.126 29.630 0.00 0.00 41.58 3.06
250 251 9.230122 TCTTGCATGTAATTTAGAGATGACAAA 57.770 29.630 0.00 0.00 0.00 2.83
251 252 8.668353 GTCTTGCATGTAATTTAGAGATGACAA 58.332 33.333 0.00 0.00 0.00 3.18
252 253 8.043113 AGTCTTGCATGTAATTTAGAGATGACA 58.957 33.333 0.00 0.00 0.00 3.58
253 254 8.430801 AGTCTTGCATGTAATTTAGAGATGAC 57.569 34.615 0.00 0.00 0.00 3.06
265 266 9.944376 AGTCTTATCTTTAAGTCTTGCATGTAA 57.056 29.630 0.00 0.00 36.87 2.41
266 267 9.371136 CAGTCTTATCTTTAAGTCTTGCATGTA 57.629 33.333 0.00 0.00 36.87 2.29
267 268 7.880195 ACAGTCTTATCTTTAAGTCTTGCATGT 59.120 33.333 0.00 0.00 36.87 3.21
268 269 8.261492 ACAGTCTTATCTTTAAGTCTTGCATG 57.739 34.615 0.00 0.00 36.87 4.06
269 270 8.317679 AGACAGTCTTATCTTTAAGTCTTGCAT 58.682 33.333 0.00 0.00 36.87 3.96
270 271 7.671302 AGACAGTCTTATCTTTAAGTCTTGCA 58.329 34.615 0.00 0.00 36.87 4.08
271 272 8.541133 AAGACAGTCTTATCTTTAAGTCTTGC 57.459 34.615 14.58 0.00 34.42 4.01
286 287 9.896645 ATGTACAATGATTGATAAGACAGTCTT 57.103 29.630 19.81 19.81 40.35 3.01
287 288 9.322773 CATGTACAATGATTGATAAGACAGTCT 57.677 33.333 12.80 0.00 0.00 3.24
288 289 8.066595 GCATGTACAATGATTGATAAGACAGTC 58.933 37.037 12.80 0.00 0.00 3.51
289 290 7.553760 TGCATGTACAATGATTGATAAGACAGT 59.446 33.333 12.80 0.00 0.00 3.55
290 291 7.922837 TGCATGTACAATGATTGATAAGACAG 58.077 34.615 12.80 4.11 0.00 3.51
291 292 7.862512 TGCATGTACAATGATTGATAAGACA 57.137 32.000 12.80 7.87 0.00 3.41
292 293 7.325338 GCATGCATGTACAATGATTGATAAGAC 59.675 37.037 26.79 0.46 0.00 3.01
293 294 7.229907 AGCATGCATGTACAATGATTGATAAGA 59.770 33.333 26.79 0.00 0.00 2.10
294 295 7.368059 AGCATGCATGTACAATGATTGATAAG 58.632 34.615 26.79 0.00 0.00 1.73
295 296 7.279750 AGCATGCATGTACAATGATTGATAA 57.720 32.000 26.79 0.00 0.00 1.75
296 297 6.887626 AGCATGCATGTACAATGATTGATA 57.112 33.333 26.79 0.00 0.00 2.15
297 298 5.784578 AGCATGCATGTACAATGATTGAT 57.215 34.783 26.79 0.00 0.00 2.57
298 299 6.263617 ACATAGCATGCATGTACAATGATTGA 59.736 34.615 26.79 0.00 34.88 2.57
299 300 6.443792 ACATAGCATGCATGTACAATGATTG 58.556 36.000 26.79 3.16 34.88 2.67
300 301 6.294342 GGACATAGCATGCATGTACAATGATT 60.294 38.462 26.98 10.73 37.22 2.57
301 302 5.182570 GGACATAGCATGCATGTACAATGAT 59.817 40.000 26.98 14.44 37.22 2.45
302 303 4.516321 GGACATAGCATGCATGTACAATGA 59.484 41.667 26.98 6.20 37.22 2.57
303 304 4.276431 TGGACATAGCATGCATGTACAATG 59.724 41.667 29.91 23.22 42.84 2.82
304 305 4.463070 TGGACATAGCATGCATGTACAAT 58.537 39.130 29.91 12.75 42.84 2.71
305 306 3.883669 TGGACATAGCATGCATGTACAA 58.116 40.909 29.91 19.92 42.84 2.41
306 307 3.557228 TGGACATAGCATGCATGTACA 57.443 42.857 29.07 29.07 43.42 2.90
307 308 4.898829 TTTGGACATAGCATGCATGTAC 57.101 40.909 26.01 26.01 36.76 2.90
308 309 4.949238 AGTTTTGGACATAGCATGCATGTA 59.051 37.500 26.79 17.58 36.76 2.29
309 310 3.765511 AGTTTTGGACATAGCATGCATGT 59.234 39.130 26.79 25.70 39.31 3.21
310 311 4.097437 AGAGTTTTGGACATAGCATGCATG 59.903 41.667 22.70 22.70 0.00 4.06
311 312 4.275810 AGAGTTTTGGACATAGCATGCAT 58.724 39.130 21.98 8.63 0.00 3.96
312 313 3.689347 AGAGTTTTGGACATAGCATGCA 58.311 40.909 21.98 6.36 0.00 3.96
313 314 5.755813 CATAGAGTTTTGGACATAGCATGC 58.244 41.667 10.51 10.51 0.00 4.06
314 315 5.278169 GGCATAGAGTTTTGGACATAGCATG 60.278 44.000 0.00 0.00 0.00 4.06
315 316 4.823989 GGCATAGAGTTTTGGACATAGCAT 59.176 41.667 0.00 0.00 0.00 3.79
316 317 4.199310 GGCATAGAGTTTTGGACATAGCA 58.801 43.478 0.00 0.00 0.00 3.49
319 320 5.056480 CGATGGCATAGAGTTTTGGACATA 58.944 41.667 0.00 0.00 0.00 2.29
329 330 1.485124 TCACACCGATGGCATAGAGT 58.515 50.000 9.32 4.68 0.00 3.24
330 331 2.602257 TTCACACCGATGGCATAGAG 57.398 50.000 9.32 4.07 0.00 2.43
331 332 2.545742 CGATTCACACCGATGGCATAGA 60.546 50.000 9.32 0.00 0.00 1.98
332 333 1.794701 CGATTCACACCGATGGCATAG 59.205 52.381 0.00 0.00 0.00 2.23
333 334 1.138069 ACGATTCACACCGATGGCATA 59.862 47.619 0.00 0.00 0.00 3.14
339 340 0.460284 GCAGGACGATTCACACCGAT 60.460 55.000 0.00 0.00 0.00 4.18
341 342 0.670546 AAGCAGGACGATTCACACCG 60.671 55.000 0.00 0.00 0.00 4.94
353 354 1.839994 CTGGATTGTCCCTAAGCAGGA 59.160 52.381 0.00 0.00 45.91 3.86
367 368 5.869579 ACAATCACAGTGTAGTTCTGGATT 58.130 37.500 0.00 0.00 37.25 3.01
442 443 0.111253 CACTCAGGAGGCCCAAAGTT 59.889 55.000 0.00 0.00 30.09 2.66
466 467 1.134007 TCATGGCCATGTGGACTGATC 60.134 52.381 38.18 0.00 45.91 2.92
467 468 0.921166 TCATGGCCATGTGGACTGAT 59.079 50.000 38.18 3.75 45.91 2.90
469 470 0.253894 TCTCATGGCCATGTGGACTG 59.746 55.000 38.18 23.30 45.91 3.51
470 471 0.254178 GTCTCATGGCCATGTGGACT 59.746 55.000 37.16 14.79 45.91 3.85
471 472 0.254178 AGTCTCATGGCCATGTGGAC 59.746 55.000 37.39 37.39 45.93 4.02
472 473 0.253894 CAGTCTCATGGCCATGTGGA 59.746 55.000 38.18 32.10 39.72 4.02
473 474 1.381928 GCAGTCTCATGGCCATGTGG 61.382 60.000 38.18 30.73 39.72 4.17
474 475 0.393944 AGCAGTCTCATGGCCATGTG 60.394 55.000 38.18 35.33 39.72 3.21
475 476 0.393944 CAGCAGTCTCATGGCCATGT 60.394 55.000 38.18 21.38 39.72 3.21
533 539 1.523711 CTCGCTCTCTCTCCGCTCT 60.524 63.158 0.00 0.00 0.00 4.09
534 540 3.022287 CTCGCTCTCTCTCCGCTC 58.978 66.667 0.00 0.00 0.00 5.03
535 541 3.209097 GCTCGCTCTCTCTCCGCT 61.209 66.667 0.00 0.00 0.00 5.52
537 543 2.407210 GTGCTCGCTCTCTCTCCG 59.593 66.667 0.00 0.00 0.00 4.63
539 545 1.649390 TTCGGTGCTCGCTCTCTCTC 61.649 60.000 0.00 0.00 39.05 3.20
556 568 7.201565 GCTCAATGTGATTACTTGTACTCCTTC 60.202 40.741 0.00 0.00 0.00 3.46
563 575 6.934083 TGTGAAGCTCAATGTGATTACTTGTA 59.066 34.615 0.00 0.00 0.00 2.41
576 588 5.807520 CGACTAATACAGTGTGAAGCTCAAT 59.192 40.000 5.88 0.00 37.72 2.57
589 601 9.878599 AAACAAAACAGAAATCGACTAATACAG 57.121 29.630 0.00 0.00 0.00 2.74
626 638 5.763204 ACAGAAATAGACTTCCTCGCAAAAA 59.237 36.000 0.00 0.00 0.00 1.94
627 639 5.305585 ACAGAAATAGACTTCCTCGCAAAA 58.694 37.500 0.00 0.00 0.00 2.44
628 640 4.894784 ACAGAAATAGACTTCCTCGCAAA 58.105 39.130 0.00 0.00 0.00 3.68
629 641 4.537135 ACAGAAATAGACTTCCTCGCAA 57.463 40.909 0.00 0.00 0.00 4.85
630 642 4.537135 AACAGAAATAGACTTCCTCGCA 57.463 40.909 0.00 0.00 0.00 5.10
631 643 5.864628 AAAACAGAAATAGACTTCCTCGC 57.135 39.130 0.00 0.00 0.00 5.03
632 644 8.221766 GTGTTAAAACAGAAATAGACTTCCTCG 58.778 37.037 0.00 0.00 40.05 4.63
633 645 8.504815 GGTGTTAAAACAGAAATAGACTTCCTC 58.495 37.037 0.00 0.00 40.05 3.71
634 646 7.996644 TGGTGTTAAAACAGAAATAGACTTCCT 59.003 33.333 0.00 0.00 40.05 3.36
635 647 8.161699 TGGTGTTAAAACAGAAATAGACTTCC 57.838 34.615 0.00 0.00 40.05 3.46
636 648 9.447040 GTTGGTGTTAAAACAGAAATAGACTTC 57.553 33.333 0.00 0.00 40.05 3.01
637 649 9.185680 AGTTGGTGTTAAAACAGAAATAGACTT 57.814 29.630 0.00 0.00 40.05 3.01
657 669 2.169769 TCTCGTGTCCTTTCAAGTTGGT 59.830 45.455 2.34 0.00 0.00 3.67
675 687 1.386533 CATGCCACCCTGTTCATCTC 58.613 55.000 0.00 0.00 0.00 2.75
699 711 0.727398 GAGAAAACCTCCAATCGCGG 59.273 55.000 6.13 0.00 35.87 6.46
802 815 2.276306 GCGTCCGAGTACGACGAC 60.276 66.667 21.13 11.22 45.68 4.34
809 822 1.211969 GACAAGCTGCGTCCGAGTA 59.788 57.895 5.42 0.00 0.00 2.59
815 828 1.975363 GATGCCTGACAAGCTGCGTC 61.975 60.000 9.15 9.15 33.15 5.19
853 866 5.203370 GCGCAGATAAAATCAAGTCATCAG 58.797 41.667 0.30 0.00 0.00 2.90
868 881 2.578163 AAAGGAGCAGCGCGCAGATA 62.578 55.000 35.10 0.00 46.13 1.98
910 923 6.326323 TCCATTTATGCATGAGTACCTCAGTA 59.674 38.462 10.16 0.00 44.08 2.74
911 924 5.130975 TCCATTTATGCATGAGTACCTCAGT 59.869 40.000 10.16 0.00 44.08 3.41
912 925 5.468072 GTCCATTTATGCATGAGTACCTCAG 59.532 44.000 10.16 0.00 44.08 3.35
913 926 5.104569 TGTCCATTTATGCATGAGTACCTCA 60.105 40.000 10.16 0.00 44.99 3.86
914 927 5.368145 TGTCCATTTATGCATGAGTACCTC 58.632 41.667 10.16 0.00 0.00 3.85
1102 1140 1.028905 CAAAAGAGGCACGGGAACAA 58.971 50.000 0.00 0.00 0.00 2.83
1131 1169 2.439156 GCCTGCGGCTTGAGGAAT 60.439 61.111 8.88 0.00 46.69 3.01
1191 1230 2.203877 ACGTAGGGGTTCCAGCCA 60.204 61.111 0.00 0.00 37.54 4.75
1229 1274 4.057428 GAGACGAGGCGGCACTGT 62.057 66.667 13.08 6.05 37.34 3.55
1252 1300 2.029964 GAAGTTGTCGGTGGCGGA 59.970 61.111 0.00 0.00 0.00 5.54
1457 1508 4.680237 CGCCGGTGTTGCTCTCCA 62.680 66.667 6.91 0.00 0.00 3.86
1483 1534 0.612174 TAGAGTCGCAGCTCCAGGTT 60.612 55.000 1.41 0.00 36.20 3.50
1591 1644 6.478512 AAACTGAAGAAGGGCAATACAAAA 57.521 33.333 0.00 0.00 0.00 2.44
1597 1650 5.357742 AACAAAAACTGAAGAAGGGCAAT 57.642 34.783 0.00 0.00 0.00 3.56
1660 1725 3.193267 GGTCATGCTTGAATAAGGCAACA 59.807 43.478 3.51 0.00 33.47 3.33
1699 1778 6.714810 AGGCGATGCAATATTTGGAATTACTA 59.285 34.615 0.00 0.00 33.68 1.82
1750 1832 6.765989 CGGAAGGAGTATTTATGAACCAATCA 59.234 38.462 0.00 0.00 43.67 2.57
1751 1833 6.766467 ACGGAAGGAGTATTTATGAACCAATC 59.234 38.462 0.00 0.00 0.00 2.67
1753 1835 6.057321 ACGGAAGGAGTATTTATGAACCAA 57.943 37.500 0.00 0.00 0.00 3.67
1754 1836 5.687166 ACGGAAGGAGTATTTATGAACCA 57.313 39.130 0.00 0.00 0.00 3.67
1755 1837 8.672823 ATTTACGGAAGGAGTATTTATGAACC 57.327 34.615 0.00 0.00 0.00 3.62
1766 1848 9.708092 GCTCTTATATTAATTTACGGAAGGAGT 57.292 33.333 0.00 0.00 0.00 3.85
1767 1849 8.861101 CGCTCTTATATTAATTTACGGAAGGAG 58.139 37.037 0.00 0.00 0.00 3.69
1768 1850 8.362639 ACGCTCTTATATTAATTTACGGAAGGA 58.637 33.333 0.00 0.00 0.00 3.36
1769 1851 8.530269 ACGCTCTTATATTAATTTACGGAAGG 57.470 34.615 0.00 0.00 0.00 3.46
1771 1853 9.531942 TGAACGCTCTTATATTAATTTACGGAA 57.468 29.630 0.00 0.00 0.00 4.30
1772 1854 9.188588 CTGAACGCTCTTATATTAATTTACGGA 57.811 33.333 0.00 0.00 0.00 4.69
1773 1855 9.188588 TCTGAACGCTCTTATATTAATTTACGG 57.811 33.333 0.00 0.00 0.00 4.02
1782 1864 8.091449 CCCTCTTATTCTGAACGCTCTTATATT 58.909 37.037 0.00 0.00 0.00 1.28
1783 1865 7.451877 TCCCTCTTATTCTGAACGCTCTTATAT 59.548 37.037 0.00 0.00 0.00 0.86
1784 1866 6.776116 TCCCTCTTATTCTGAACGCTCTTATA 59.224 38.462 0.00 0.00 0.00 0.98
1785 1867 5.598830 TCCCTCTTATTCTGAACGCTCTTAT 59.401 40.000 0.00 0.00 0.00 1.73
1786 1868 4.954202 TCCCTCTTATTCTGAACGCTCTTA 59.046 41.667 0.00 0.00 0.00 2.10
1787 1869 3.769844 TCCCTCTTATTCTGAACGCTCTT 59.230 43.478 0.00 0.00 0.00 2.85
1788 1870 3.366396 TCCCTCTTATTCTGAACGCTCT 58.634 45.455 0.00 0.00 0.00 4.09
1789 1871 3.131400 ACTCCCTCTTATTCTGAACGCTC 59.869 47.826 0.00 0.00 0.00 5.03
1790 1872 3.100671 ACTCCCTCTTATTCTGAACGCT 58.899 45.455 0.00 0.00 0.00 5.07
1791 1873 3.528597 ACTCCCTCTTATTCTGAACGC 57.471 47.619 0.00 0.00 0.00 4.84
1792 1874 8.798402 AGATATTACTCCCTCTTATTCTGAACG 58.202 37.037 0.00 0.00 0.00 3.95
1794 1876 9.883293 TGAGATATTACTCCCTCTTATTCTGAA 57.117 33.333 0.00 0.00 36.22 3.02
1795 1877 9.883293 TTGAGATATTACTCCCTCTTATTCTGA 57.117 33.333 0.00 0.00 36.22 3.27
1796 1878 9.921637 GTTGAGATATTACTCCCTCTTATTCTG 57.078 37.037 0.00 0.00 36.22 3.02
1797 1879 9.890915 AGTTGAGATATTACTCCCTCTTATTCT 57.109 33.333 0.00 0.00 36.22 2.40
1800 1882 9.440761 ACAAGTTGAGATATTACTCCCTCTTAT 57.559 33.333 10.54 0.00 36.22 1.73
1801 1883 8.840200 ACAAGTTGAGATATTACTCCCTCTTA 57.160 34.615 10.54 0.00 36.22 2.10
1802 1884 7.741554 ACAAGTTGAGATATTACTCCCTCTT 57.258 36.000 10.54 0.00 36.22 2.85
1803 1885 7.741554 AACAAGTTGAGATATTACTCCCTCT 57.258 36.000 10.54 0.00 36.22 3.69
1805 1887 9.838339 CATAAACAAGTTGAGATATTACTCCCT 57.162 33.333 10.54 0.00 36.22 4.20
1806 1888 9.614792 ACATAAACAAGTTGAGATATTACTCCC 57.385 33.333 10.54 0.00 36.22 4.30
1829 1914 9.319143 GACATAGCACATTTCTAAGTAAGACAT 57.681 33.333 0.00 0.00 32.51 3.06
1833 1918 8.391106 GTTGGACATAGCACATTTCTAAGTAAG 58.609 37.037 0.00 0.00 0.00 2.34
1834 1919 7.880713 TGTTGGACATAGCACATTTCTAAGTAA 59.119 33.333 0.00 0.00 0.00 2.24
1835 1920 7.390823 TGTTGGACATAGCACATTTCTAAGTA 58.609 34.615 0.00 0.00 0.00 2.24
1836 1921 6.237901 TGTTGGACATAGCACATTTCTAAGT 58.762 36.000 0.00 0.00 0.00 2.24
1849 1934 6.161855 TGCCTACTCTAATGTTGGACATAG 57.838 41.667 0.00 0.00 37.97 2.23
1877 3766 1.338674 TGCATGTCCTCGGTAACCTTG 60.339 52.381 0.00 0.00 0.00 3.61
1879 3768 1.204146 ATGCATGTCCTCGGTAACCT 58.796 50.000 0.00 0.00 0.00 3.50
1880 3769 2.902705 TATGCATGTCCTCGGTAACC 57.097 50.000 10.16 0.00 0.00 2.85
1881 3770 2.480419 GCATATGCATGTCCTCGGTAAC 59.520 50.000 22.84 0.00 41.59 2.50
1882 3771 2.766313 GCATATGCATGTCCTCGGTAA 58.234 47.619 22.84 0.00 41.59 2.85
1883 3772 1.336795 CGCATATGCATGTCCTCGGTA 60.337 52.381 26.52 0.00 42.21 4.02
1884 3773 0.601046 CGCATATGCATGTCCTCGGT 60.601 55.000 26.52 0.00 42.21 4.69
1885 3774 0.601046 ACGCATATGCATGTCCTCGG 60.601 55.000 26.52 9.84 42.21 4.63
1886 3775 1.193203 GAACGCATATGCATGTCCTCG 59.807 52.381 26.52 10.54 42.21 4.63
1887 3776 2.212652 TGAACGCATATGCATGTCCTC 58.787 47.619 26.52 12.87 42.21 3.71
1888 3777 2.330440 TGAACGCATATGCATGTCCT 57.670 45.000 26.52 4.26 42.21 3.85
1889 3778 3.558505 GATTGAACGCATATGCATGTCC 58.441 45.455 26.52 6.75 42.21 4.02
1890 3779 3.220773 CGATTGAACGCATATGCATGTC 58.779 45.455 26.52 18.95 42.21 3.06
1891 3780 2.031769 CCGATTGAACGCATATGCATGT 60.032 45.455 26.52 14.73 42.21 3.21
1892 3781 2.577450 CCGATTGAACGCATATGCATG 58.423 47.619 26.52 14.07 42.21 4.06
1893 3782 1.536766 CCCGATTGAACGCATATGCAT 59.463 47.619 26.52 15.05 42.21 3.96
1894 3783 0.943673 CCCGATTGAACGCATATGCA 59.056 50.000 26.52 7.82 42.21 3.96
1896 3785 0.110688 CGCCCGATTGAACGCATATG 60.111 55.000 0.00 0.00 0.00 1.78
1897 3786 2.234613 CGCCCGATTGAACGCATAT 58.765 52.632 0.00 0.00 0.00 1.78
1898 3787 3.712655 CGCCCGATTGAACGCATA 58.287 55.556 0.00 0.00 0.00 3.14
1902 3791 4.499023 CGTGCGCCCGATTGAACG 62.499 66.667 6.36 1.58 0.00 3.95
1915 3804 3.522553 ACAGAAAGCTACTTATCCGTGC 58.477 45.455 0.00 0.00 0.00 5.34
1917 3806 6.465084 AGAAAACAGAAAGCTACTTATCCGT 58.535 36.000 0.00 0.00 0.00 4.69
1918 3807 6.814146 AGAGAAAACAGAAAGCTACTTATCCG 59.186 38.462 0.00 0.00 0.00 4.18
1919 3808 7.604545 ACAGAGAAAACAGAAAGCTACTTATCC 59.395 37.037 0.00 0.00 0.00 2.59
1920 3809 8.541133 ACAGAGAAAACAGAAAGCTACTTATC 57.459 34.615 0.00 0.00 0.00 1.75
1962 5594 3.735820 CGTACAAATTCGCTAGCCACCTA 60.736 47.826 9.66 0.00 0.00 3.08
1973 6938 5.864986 ACAAATTCTAGCCGTACAAATTCG 58.135 37.500 0.00 0.00 0.00 3.34
1975 6940 8.019094 GTGTAACAAATTCTAGCCGTACAAATT 58.981 33.333 0.00 0.00 36.32 1.82
2024 6989 1.798626 ACTAGCCCTCAGATGCATGA 58.201 50.000 2.46 0.00 0.00 3.07
2046 7013 4.054671 GAGATCATTGGTTGACCGAGATC 58.945 47.826 15.60 15.60 37.11 2.75
2120 7090 4.128643 TGTAAGTTGGTAACCACGGAAAG 58.871 43.478 0.00 0.00 30.78 2.62
2143 7113 8.816894 AGTTCCTTATTCAAGAGATGTTCTACA 58.183 33.333 0.00 0.00 34.14 2.74
2155 7125 9.720769 TTAGTTCTACCAAGTTCCTTATTCAAG 57.279 33.333 0.00 0.00 0.00 3.02
2172 7142 7.311408 ACATTAGGTTCGTGACTTAGTTCTAC 58.689 38.462 0.00 0.00 0.00 2.59
2175 7145 7.417496 AAACATTAGGTTCGTGACTTAGTTC 57.583 36.000 0.00 0.00 39.29 3.01
2176 7146 7.306983 CGAAAACATTAGGTTCGTGACTTAGTT 60.307 37.037 0.00 0.00 39.29 2.24
2177 7147 6.145048 CGAAAACATTAGGTTCGTGACTTAGT 59.855 38.462 0.00 0.00 39.29 2.24
2178 7148 6.364165 TCGAAAACATTAGGTTCGTGACTTAG 59.636 38.462 5.11 0.00 43.48 2.18
2179 7149 6.215121 TCGAAAACATTAGGTTCGTGACTTA 58.785 36.000 5.11 0.00 43.48 2.24
2180 7150 5.051816 TCGAAAACATTAGGTTCGTGACTT 58.948 37.500 5.11 0.00 43.48 3.01
2182 7152 4.977741 TCGAAAACATTAGGTTCGTGAC 57.022 40.909 5.11 0.00 43.48 3.67
2184 7154 6.140110 ACAAATCGAAAACATTAGGTTCGTG 58.860 36.000 5.11 0.11 43.48 4.35
2185 7155 6.308371 ACAAATCGAAAACATTAGGTTCGT 57.692 33.333 5.11 0.00 43.48 3.85
2186 7156 8.889849 ATTACAAATCGAAAACATTAGGTTCG 57.110 30.769 0.00 0.00 44.18 3.95
2225 7220 4.454728 AAGAAAGCAGTGCAAAGTTGAA 57.545 36.364 19.20 0.00 0.00 2.69
2237 7232 7.436118 AGATGCTCTAAGATCTAAGAAAGCAG 58.564 38.462 17.55 1.31 29.70 4.24
2244 7239 5.336690 GGCTGGAGATGCTCTAAGATCTAAG 60.337 48.000 0.00 0.00 0.00 2.18
2251 7246 0.599728 GCGGCTGGAGATGCTCTAAG 60.600 60.000 0.00 0.00 0.00 2.18
2252 7247 1.443407 GCGGCTGGAGATGCTCTAA 59.557 57.895 0.00 0.00 0.00 2.10
2254 7249 4.218578 CGCGGCTGGAGATGCTCT 62.219 66.667 0.00 0.00 0.00 4.09
2297 7292 1.429927 TTCAGCGTCGGCGACAAAAA 61.430 50.000 35.62 21.65 46.35 1.94
2301 7296 1.225376 AATTTTCAGCGTCGGCGACA 61.225 50.000 35.62 17.68 46.35 4.35
2302 7297 0.518559 GAATTTTCAGCGTCGGCGAC 60.519 55.000 29.06 29.06 46.35 5.19
2303 7298 1.785321 GAATTTTCAGCGTCGGCGA 59.215 52.632 16.53 4.99 46.35 5.54
2304 7299 1.577616 CGAATTTTCAGCGTCGGCG 60.578 57.895 4.29 4.29 46.35 6.46
2305 7300 1.226018 CCGAATTTTCAGCGTCGGC 60.226 57.895 0.00 0.00 45.74 5.54
2307 7302 1.226018 GGCCGAATTTTCAGCGTCG 60.226 57.895 0.00 0.00 31.45 5.12
2308 7303 1.136774 GGGCCGAATTTTCAGCGTC 59.863 57.895 0.00 0.00 31.45 5.19
2309 7304 1.586154 CTGGGCCGAATTTTCAGCGT 61.586 55.000 0.00 0.00 31.45 5.07
2310 7305 1.137404 CTGGGCCGAATTTTCAGCG 59.863 57.895 0.00 0.00 31.45 5.18
2311 7306 1.153765 GCTGGGCCGAATTTTCAGC 60.154 57.895 11.39 11.39 42.89 4.26
2312 7307 1.512694 GGCTGGGCCGAATTTTCAG 59.487 57.895 0.00 0.00 39.62 3.02
2332 7327 3.963124 AATTGGGCTTCTGGGGGCG 62.963 63.158 0.00 0.00 0.00 6.13
2333 7328 1.200760 AAAATTGGGCTTCTGGGGGC 61.201 55.000 0.00 0.00 0.00 5.80
2334 7329 0.904649 GAAAATTGGGCTTCTGGGGG 59.095 55.000 0.00 0.00 0.00 5.40
2335 7330 0.532115 CGAAAATTGGGCTTCTGGGG 59.468 55.000 0.00 0.00 0.00 4.96
2336 7331 0.108662 GCGAAAATTGGGCTTCTGGG 60.109 55.000 0.00 0.00 0.00 4.45
2337 7332 0.456653 CGCGAAAATTGGGCTTCTGG 60.457 55.000 0.00 0.00 0.00 3.86
2338 7333 0.456653 CCGCGAAAATTGGGCTTCTG 60.457 55.000 8.23 0.00 0.00 3.02
2339 7334 1.883021 CCGCGAAAATTGGGCTTCT 59.117 52.632 8.23 0.00 0.00 2.85
2341 7336 2.261361 GCCGCGAAAATTGGGCTT 59.739 55.556 8.23 0.00 42.29 4.35
2343 7338 2.094066 CAAGCCGCGAAAATTGGGC 61.094 57.895 8.23 0.00 45.91 5.36
2344 7339 1.445926 CCAAGCCGCGAAAATTGGG 60.446 57.895 8.23 0.00 38.82 4.12
2345 7340 1.445926 CCCAAGCCGCGAAAATTGG 60.446 57.895 8.23 15.44 41.55 3.16
2346 7341 2.094066 GCCCAAGCCGCGAAAATTG 61.094 57.895 8.23 6.63 0.00 2.32
2347 7342 2.261361 GCCCAAGCCGCGAAAATT 59.739 55.556 8.23 0.00 0.00 1.82
2365 7360 4.834892 CTGCCGGCGCCAAAATCG 62.835 66.667 28.98 11.16 0.00 3.34
2366 7361 3.439540 TCTGCCGGCGCCAAAATC 61.440 61.111 28.98 10.27 0.00 2.17
2367 7362 3.747976 GTCTGCCGGCGCCAAAAT 61.748 61.111 28.98 0.00 0.00 1.82
2378 7373 4.554036 GATCGGCCTGGGTCTGCC 62.554 72.222 0.00 0.00 44.41 4.85
2379 7374 4.554036 GGATCGGCCTGGGTCTGC 62.554 72.222 0.00 0.00 0.00 4.26
2392 7387 4.671569 CCCTAGCGCGCCAGGATC 62.672 72.222 41.17 8.44 33.42 3.36
2410 7405 1.873270 AAATTCTGTTTCCCCGGCGC 61.873 55.000 0.00 0.00 0.00 6.53
2411 7406 0.109319 CAAATTCTGTTTCCCCGGCG 60.109 55.000 0.00 0.00 0.00 6.46
2412 7407 0.246360 CCAAATTCTGTTTCCCCGGC 59.754 55.000 0.00 0.00 0.00 6.13
2413 7408 0.246360 GCCAAATTCTGTTTCCCCGG 59.754 55.000 0.00 0.00 0.00 5.73
2415 7410 0.389817 GCGCCAAATTCTGTTTCCCC 60.390 55.000 0.00 0.00 0.00 4.81
2416 7411 0.732538 CGCGCCAAATTCTGTTTCCC 60.733 55.000 0.00 0.00 0.00 3.97
2417 7412 0.239879 TCGCGCCAAATTCTGTTTCC 59.760 50.000 0.00 0.00 0.00 3.13
2420 7415 0.665835 TGTTCGCGCCAAATTCTGTT 59.334 45.000 0.00 0.00 0.00 3.16
2422 7417 0.454957 CCTGTTCGCGCCAAATTCTG 60.455 55.000 0.00 0.00 0.00 3.02
2423 7418 0.605319 TCCTGTTCGCGCCAAATTCT 60.605 50.000 0.00 0.00 0.00 2.40
2424 7419 0.451783 ATCCTGTTCGCGCCAAATTC 59.548 50.000 0.00 0.00 0.00 2.17
2425 7420 0.887933 AATCCTGTTCGCGCCAAATT 59.112 45.000 0.00 1.04 0.00 1.82
2426 7421 0.171007 CAATCCTGTTCGCGCCAAAT 59.829 50.000 0.00 0.00 0.00 2.32
2428 7423 2.331893 CCAATCCTGTTCGCGCCAA 61.332 57.895 0.00 0.00 0.00 4.52
2429 7424 2.745884 CCAATCCTGTTCGCGCCA 60.746 61.111 0.00 0.00 0.00 5.69
2430 7425 3.508840 CCCAATCCTGTTCGCGCC 61.509 66.667 0.00 0.00 0.00 6.53
2432 7427 0.673644 AGAACCCAATCCTGTTCGCG 60.674 55.000 0.00 0.00 44.30 5.87
2433 7428 1.087501 GAGAACCCAATCCTGTTCGC 58.912 55.000 0.00 0.00 44.30 4.70
2434 7429 1.739067 GGAGAACCCAATCCTGTTCG 58.261 55.000 0.00 0.00 44.30 3.95
2435 7430 1.278127 TCGGAGAACCCAATCCTGTTC 59.722 52.381 0.00 0.00 40.88 3.18
2436 7431 1.279271 CTCGGAGAACCCAATCCTGTT 59.721 52.381 0.00 0.00 34.09 3.16
2438 7433 0.905357 ACTCGGAGAACCCAATCCTG 59.095 55.000 12.86 0.00 34.09 3.86
2439 7434 1.196012 GACTCGGAGAACCCAATCCT 58.804 55.000 12.86 0.00 34.09 3.24
2440 7435 0.902531 TGACTCGGAGAACCCAATCC 59.097 55.000 12.86 0.00 34.09 3.01
2441 7436 1.740718 GCTGACTCGGAGAACCCAATC 60.741 57.143 12.86 0.00 34.09 2.67
2442 7437 0.250513 GCTGACTCGGAGAACCCAAT 59.749 55.000 12.86 0.00 34.09 3.16
2444 7439 2.636412 CGCTGACTCGGAGAACCCA 61.636 63.158 12.86 3.40 34.09 4.51
2446 7441 1.153997 GTCGCTGACTCGGAGAACC 60.154 63.158 12.86 1.20 34.09 3.62
2447 7442 1.877367 AGTCGCTGACTCGGAGAAC 59.123 57.895 12.86 6.06 38.71 3.01
2469 7464 1.586564 GATGAGGACGACGAAGGCG 60.587 63.158 0.00 0.00 44.79 5.52
2470 7465 1.586564 CGATGAGGACGACGAAGGC 60.587 63.158 0.00 0.00 0.00 4.35
2471 7466 1.586564 GCGATGAGGACGACGAAGG 60.587 63.158 0.00 0.00 0.00 3.46
2473 7468 2.099638 CGCGATGAGGACGACGAA 59.900 61.111 0.00 0.00 34.42 3.85
2475 7470 2.648102 GACGCGATGAGGACGACG 60.648 66.667 15.93 0.00 36.78 5.12
2476 7471 1.583967 CTGACGCGATGAGGACGAC 60.584 63.158 15.93 0.00 0.00 4.34
2477 7472 1.583495 AACTGACGCGATGAGGACGA 61.583 55.000 15.93 0.00 0.00 4.20
2478 7473 1.134530 GAACTGACGCGATGAGGACG 61.135 60.000 15.93 0.00 0.00 4.79
2479 7474 0.802607 GGAACTGACGCGATGAGGAC 60.803 60.000 15.93 3.83 0.00 3.85
2480 7475 1.511305 GGAACTGACGCGATGAGGA 59.489 57.895 15.93 0.00 0.00 3.71
2481 7476 1.519455 GGGAACTGACGCGATGAGG 60.519 63.158 15.93 0.00 0.00 3.86
2482 7477 1.078759 GTGGGAACTGACGCGATGAG 61.079 60.000 15.93 7.74 0.00 2.90
2484 7479 2.444624 CGTGGGAACTGACGCGATG 61.445 63.158 15.93 4.47 42.67 3.84
2486 7481 4.351938 CCGTGGGAACTGACGCGA 62.352 66.667 15.93 0.00 42.67 5.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.