Multiple sequence alignment - TraesCS4B01G352100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G352100 chr4B 100.000 4271 0 0 1 4271 644093449 644097719 0.000000e+00 7888.0
1 TraesCS4B01G352100 chr5A 91.929 3370 163 57 206 3521 681383959 681387273 0.000000e+00 4615.0
2 TraesCS4B01G352100 chr4D 91.971 3313 175 45 206 3496 500467205 500470448 0.000000e+00 4560.0
3 TraesCS4B01G352100 chr4D 89.720 428 17 12 3519 3932 500470509 500470923 4.890000e-144 521.0
4 TraesCS4B01G352100 chr1A 81.437 2144 354 38 1137 3252 338214931 338217058 0.000000e+00 1714.0
5 TraesCS4B01G352100 chr1B 80.474 2238 383 41 1042 3252 350025931 350028141 0.000000e+00 1663.0
6 TraesCS4B01G352100 chr1B 78.577 1237 247 13 1871 3095 570299139 570300369 0.000000e+00 800.0
7 TraesCS4B01G352100 chr1B 82.853 694 114 5 1439 2131 350053831 350054520 6.070000e-173 617.0
8 TraesCS4B01G352100 chr1B 85.014 347 47 5 3927 4271 509018129 509018472 8.790000e-92 348.0
9 TraesCS4B01G352100 chr1D 80.544 2205 374 43 1077 3252 261841806 261839628 0.000000e+00 1644.0
10 TraesCS4B01G352100 chr1D 85.303 347 47 4 3927 4271 379728629 379728973 5.250000e-94 355.0
11 TraesCS4B01G352100 chr7B 79.197 1394 269 15 1871 3252 516800388 516799004 0.000000e+00 948.0
12 TraesCS4B01G352100 chr7B 79.155 1396 266 18 1871 3252 656196068 656197452 0.000000e+00 942.0
13 TraesCS4B01G352100 chr7B 85.673 349 42 8 3927 4271 479812574 479812918 1.130000e-95 361.0
14 TraesCS4B01G352100 chr2B 79.053 1394 271 15 1871 3252 467877234 467875850 0.000000e+00 937.0
15 TraesCS4B01G352100 chr6B 90.575 626 57 2 1164 1788 520782141 520782765 0.000000e+00 828.0
16 TraesCS4B01G352100 chr6B 91.111 405 27 4 1782 2186 520783108 520783503 1.350000e-149 540.0
17 TraesCS4B01G352100 chr7A 86.087 345 46 2 3928 4271 307010074 307009731 1.880000e-98 370.0
18 TraesCS4B01G352100 chr3A 86.087 345 44 4 3928 4271 632276849 632277190 6.750000e-98 368.0
19 TraesCS4B01G352100 chr2A 85.549 346 45 5 3929 4271 73547568 73547225 1.460000e-94 357.0
20 TraesCS4B01G352100 chr2A 85.303 347 47 4 3928 4271 654384061 654383716 5.250000e-94 355.0
21 TraesCS4B01G352100 chr2D 84.726 347 49 4 3927 4271 204488629 204488973 1.140000e-90 344.0
22 TraesCS4B01G352100 chr2D 84.438 347 50 4 3927 4271 412637965 412637621 5.290000e-89 339.0
23 TraesCS4B01G352100 chr5B 91.304 69 5 1 1318 1386 529391524 529391457 4.550000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G352100 chr4B 644093449 644097719 4270 False 7888.0 7888 100.0000 1 4271 1 chr4B.!!$F1 4270
1 TraesCS4B01G352100 chr5A 681383959 681387273 3314 False 4615.0 4615 91.9290 206 3521 1 chr5A.!!$F1 3315
2 TraesCS4B01G352100 chr4D 500467205 500470923 3718 False 2540.5 4560 90.8455 206 3932 2 chr4D.!!$F1 3726
3 TraesCS4B01G352100 chr1A 338214931 338217058 2127 False 1714.0 1714 81.4370 1137 3252 1 chr1A.!!$F1 2115
4 TraesCS4B01G352100 chr1B 350025931 350028141 2210 False 1663.0 1663 80.4740 1042 3252 1 chr1B.!!$F1 2210
5 TraesCS4B01G352100 chr1B 570299139 570300369 1230 False 800.0 800 78.5770 1871 3095 1 chr1B.!!$F4 1224
6 TraesCS4B01G352100 chr1B 350053831 350054520 689 False 617.0 617 82.8530 1439 2131 1 chr1B.!!$F2 692
7 TraesCS4B01G352100 chr1D 261839628 261841806 2178 True 1644.0 1644 80.5440 1077 3252 1 chr1D.!!$R1 2175
8 TraesCS4B01G352100 chr7B 516799004 516800388 1384 True 948.0 948 79.1970 1871 3252 1 chr7B.!!$R1 1381
9 TraesCS4B01G352100 chr7B 656196068 656197452 1384 False 942.0 942 79.1550 1871 3252 1 chr7B.!!$F2 1381
10 TraesCS4B01G352100 chr2B 467875850 467877234 1384 True 937.0 937 79.0530 1871 3252 1 chr2B.!!$R1 1381
11 TraesCS4B01G352100 chr6B 520782141 520783503 1362 False 684.0 828 90.8430 1164 2186 2 chr6B.!!$F1 1022

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
249 256 0.036875 AGTACCAGGGAAGCTTGTGC 59.963 55.0 2.10 0.0 40.05 4.57 F
710 772 0.109781 CAAAATCAACGGTCGCCCTG 60.110 55.0 0.00 0.0 0.00 4.45 F
730 792 0.389296 CCCCGGCGGAAATTCAAAAC 60.389 55.0 30.79 0.0 0.00 2.43 F
813 881 0.390340 CCATCACTGACTCACCCACG 60.390 60.0 0.00 0.0 0.00 4.94 F
844 922 0.464916 CCCTACATAAACCCCGGCAC 60.465 60.0 0.00 0.0 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2028 2473 2.357034 TTGCCGAGCTTCACCGTC 60.357 61.111 0.00 0.0 0.00 4.79 R
2358 2807 2.093447 CCTGAAGTAGGCGGTGATCTTT 60.093 50.000 0.00 0.0 40.38 2.52 R
3057 3509 2.033448 TTCGGCATGTCCACCACC 59.967 61.111 6.92 0.0 34.01 4.61 R
3072 3524 1.080705 CGTGACCGACACCTCCTTC 60.081 63.158 7.02 0.0 45.73 3.46 R
3286 3745 3.479269 CAACGCCGAGAGCCGAAC 61.479 66.667 0.00 0.0 41.76 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 4.893424 TTTTGGGAGAAAAGTTCTGACG 57.107 40.909 0.00 0.00 40.87 4.35
46 47 3.553828 TTGGGAGAAAAGTTCTGACGT 57.446 42.857 0.00 0.00 40.87 4.34
47 48 3.553828 TGGGAGAAAAGTTCTGACGTT 57.446 42.857 0.00 0.00 40.87 3.99
48 49 4.675976 TGGGAGAAAAGTTCTGACGTTA 57.324 40.909 0.00 0.00 40.87 3.18
49 50 4.628074 TGGGAGAAAAGTTCTGACGTTAG 58.372 43.478 0.00 0.00 40.87 2.34
50 51 4.100498 TGGGAGAAAAGTTCTGACGTTAGT 59.900 41.667 7.27 0.00 40.87 2.24
51 52 5.055144 GGGAGAAAAGTTCTGACGTTAGTT 58.945 41.667 7.27 0.00 40.87 2.24
52 53 6.183360 TGGGAGAAAAGTTCTGACGTTAGTTA 60.183 38.462 7.27 0.00 40.87 2.24
53 54 6.365518 GGGAGAAAAGTTCTGACGTTAGTTAG 59.634 42.308 7.27 0.00 40.87 2.34
54 55 7.144000 GGAGAAAAGTTCTGACGTTAGTTAGA 58.856 38.462 7.27 0.00 40.87 2.10
55 56 7.650903 GGAGAAAAGTTCTGACGTTAGTTAGAA 59.349 37.037 7.27 2.40 46.43 2.10
63 64 8.706492 TTCTGACGTTAGTTAGAAACAAGAAA 57.294 30.769 7.27 0.00 45.89 2.52
64 65 8.882415 TCTGACGTTAGTTAGAAACAAGAAAT 57.118 30.769 7.27 0.00 39.60 2.17
65 66 8.975439 TCTGACGTTAGTTAGAAACAAGAAATC 58.025 33.333 7.27 0.00 39.60 2.17
66 67 8.882415 TGACGTTAGTTAGAAACAAGAAATCT 57.118 30.769 0.00 0.00 0.00 2.40
67 68 9.321562 TGACGTTAGTTAGAAACAAGAAATCTT 57.678 29.630 0.00 0.00 36.45 2.40
84 85 9.700831 AAGAAATCTTGGTAATGTTAGGCTTAT 57.299 29.630 0.00 0.00 34.38 1.73
85 86 9.343539 AGAAATCTTGGTAATGTTAGGCTTATC 57.656 33.333 0.00 0.00 0.00 1.75
86 87 7.730364 AATCTTGGTAATGTTAGGCTTATCG 57.270 36.000 0.00 0.00 0.00 2.92
87 88 5.054477 TCTTGGTAATGTTAGGCTTATCGC 58.946 41.667 0.00 0.00 38.13 4.58
88 89 4.682778 TGGTAATGTTAGGCTTATCGCT 57.317 40.909 0.00 0.00 39.13 4.93
89 90 5.031066 TGGTAATGTTAGGCTTATCGCTT 57.969 39.130 0.00 0.00 39.13 4.68
90 91 4.814234 TGGTAATGTTAGGCTTATCGCTTG 59.186 41.667 0.00 0.00 39.13 4.01
91 92 4.213482 GGTAATGTTAGGCTTATCGCTTGG 59.787 45.833 0.00 0.00 39.13 3.61
92 93 1.663695 TGTTAGGCTTATCGCTTGGC 58.336 50.000 0.00 0.00 39.13 4.52
93 94 0.945099 GTTAGGCTTATCGCTTGGCC 59.055 55.000 0.00 0.00 44.38 5.36
95 96 3.737824 GGCTTATCGCTTGGCCTC 58.262 61.111 3.32 0.00 41.20 4.70
96 97 1.894282 GGCTTATCGCTTGGCCTCC 60.894 63.158 3.32 0.00 41.20 4.30
97 98 2.247437 GCTTATCGCTTGGCCTCCG 61.247 63.158 3.32 3.90 35.14 4.63
98 99 1.595382 CTTATCGCTTGGCCTCCGG 60.595 63.158 3.32 0.00 0.00 5.14
115 116 2.663188 GCGTCCAGCCATCGATCC 60.663 66.667 0.00 0.00 40.81 3.36
116 117 2.355126 CGTCCAGCCATCGATCCG 60.355 66.667 0.00 0.00 0.00 4.18
117 118 2.663188 GTCCAGCCATCGATCCGC 60.663 66.667 0.00 0.00 0.00 5.54
118 119 3.153781 TCCAGCCATCGATCCGCA 61.154 61.111 14.67 0.00 0.00 5.69
119 120 2.031616 CCAGCCATCGATCCGCAT 59.968 61.111 14.67 0.16 0.00 4.73
120 121 2.322830 CCAGCCATCGATCCGCATG 61.323 63.158 14.67 10.07 0.00 4.06
121 122 2.667536 AGCCATCGATCCGCATGC 60.668 61.111 7.91 7.91 0.00 4.06
122 123 4.081030 GCCATCGATCCGCATGCG 62.081 66.667 32.60 32.60 39.44 4.73
123 124 4.081030 CCATCGATCCGCATGCGC 62.081 66.667 34.00 19.54 38.24 6.09
124 125 3.040175 CATCGATCCGCATGCGCT 61.040 61.111 34.00 22.76 38.24 5.92
125 126 2.736236 ATCGATCCGCATGCGCTC 60.736 61.111 34.00 27.71 38.24 5.03
126 127 4.950062 TCGATCCGCATGCGCTCC 62.950 66.667 34.00 21.44 38.24 4.70
134 135 2.514592 CATGCGCTCCCGTTCCAT 60.515 61.111 9.73 0.00 36.67 3.41
135 136 2.114670 CATGCGCTCCCGTTCCATT 61.115 57.895 9.73 0.00 36.67 3.16
136 137 2.114670 ATGCGCTCCCGTTCCATTG 61.115 57.895 9.73 0.00 36.67 2.82
137 138 2.435938 GCGCTCCCGTTCCATTGA 60.436 61.111 0.00 0.00 36.67 2.57
138 139 2.750888 GCGCTCCCGTTCCATTGAC 61.751 63.158 0.00 0.00 36.67 3.18
139 140 1.375396 CGCTCCCGTTCCATTGACA 60.375 57.895 0.00 0.00 0.00 3.58
140 141 0.744414 CGCTCCCGTTCCATTGACAT 60.744 55.000 0.00 0.00 0.00 3.06
141 142 1.463674 GCTCCCGTTCCATTGACATT 58.536 50.000 0.00 0.00 0.00 2.71
142 143 1.818674 GCTCCCGTTCCATTGACATTT 59.181 47.619 0.00 0.00 0.00 2.32
143 144 2.231235 GCTCCCGTTCCATTGACATTTT 59.769 45.455 0.00 0.00 0.00 1.82
144 145 3.306019 GCTCCCGTTCCATTGACATTTTT 60.306 43.478 0.00 0.00 0.00 1.94
145 146 4.485163 CTCCCGTTCCATTGACATTTTTC 58.515 43.478 0.00 0.00 0.00 2.29
146 147 3.257127 TCCCGTTCCATTGACATTTTTCC 59.743 43.478 0.00 0.00 0.00 3.13
147 148 3.258123 CCCGTTCCATTGACATTTTTCCT 59.742 43.478 0.00 0.00 0.00 3.36
148 149 4.262420 CCCGTTCCATTGACATTTTTCCTT 60.262 41.667 0.00 0.00 0.00 3.36
149 150 5.296748 CCGTTCCATTGACATTTTTCCTTT 58.703 37.500 0.00 0.00 0.00 3.11
150 151 5.757808 CCGTTCCATTGACATTTTTCCTTTT 59.242 36.000 0.00 0.00 0.00 2.27
151 152 6.292811 CCGTTCCATTGACATTTTTCCTTTTG 60.293 38.462 0.00 0.00 0.00 2.44
152 153 6.292811 CGTTCCATTGACATTTTTCCTTTTGG 60.293 38.462 0.00 0.00 42.21 3.28
153 154 5.619220 TCCATTGACATTTTTCCTTTTGGG 58.381 37.500 0.00 0.00 40.87 4.12
154 155 4.216042 CCATTGACATTTTTCCTTTTGGGC 59.784 41.667 0.00 0.00 40.87 5.36
155 156 4.769345 TTGACATTTTTCCTTTTGGGCT 57.231 36.364 0.00 0.00 40.87 5.19
156 157 5.878406 TTGACATTTTTCCTTTTGGGCTA 57.122 34.783 0.00 0.00 40.87 3.93
157 158 5.878406 TGACATTTTTCCTTTTGGGCTAA 57.122 34.783 0.00 0.00 40.87 3.09
158 159 5.606505 TGACATTTTTCCTTTTGGGCTAAC 58.393 37.500 0.00 0.00 40.87 2.34
159 160 4.968259 ACATTTTTCCTTTTGGGCTAACC 58.032 39.130 0.00 0.00 40.87 2.85
160 161 4.658435 ACATTTTTCCTTTTGGGCTAACCT 59.342 37.500 0.00 0.00 41.11 3.50
161 162 5.131977 ACATTTTTCCTTTTGGGCTAACCTT 59.868 36.000 0.00 0.00 41.11 3.50
162 163 5.702065 TTTTTCCTTTTGGGCTAACCTTT 57.298 34.783 0.00 0.00 41.11 3.11
163 164 5.702065 TTTTCCTTTTGGGCTAACCTTTT 57.298 34.783 0.00 0.00 41.11 2.27
164 165 4.681074 TTCCTTTTGGGCTAACCTTTTG 57.319 40.909 0.00 0.00 41.11 2.44
165 166 3.648739 TCCTTTTGGGCTAACCTTTTGT 58.351 40.909 0.00 0.00 41.11 2.83
166 167 3.639561 TCCTTTTGGGCTAACCTTTTGTC 59.360 43.478 0.00 0.00 41.11 3.18
167 168 3.552068 CCTTTTGGGCTAACCTTTTGTCG 60.552 47.826 0.00 0.00 41.11 4.35
168 169 0.955905 TTGGGCTAACCTTTTGTCGC 59.044 50.000 0.00 0.00 41.11 5.19
169 170 0.891904 TGGGCTAACCTTTTGTCGCC 60.892 55.000 0.00 0.00 40.74 5.54
170 171 0.891904 GGGCTAACCTTTTGTCGCCA 60.892 55.000 0.00 0.00 42.32 5.69
171 172 0.521735 GGCTAACCTTTTGTCGCCAG 59.478 55.000 0.00 0.00 40.99 4.85
172 173 0.109735 GCTAACCTTTTGTCGCCAGC 60.110 55.000 0.00 0.00 0.00 4.85
173 174 1.523758 CTAACCTTTTGTCGCCAGCT 58.476 50.000 0.00 0.00 0.00 4.24
174 175 2.695359 CTAACCTTTTGTCGCCAGCTA 58.305 47.619 0.00 0.00 0.00 3.32
175 176 1.523758 AACCTTTTGTCGCCAGCTAG 58.476 50.000 0.00 0.00 0.00 3.42
176 177 0.955919 ACCTTTTGTCGCCAGCTAGC 60.956 55.000 6.62 6.62 0.00 3.42
177 178 1.648467 CCTTTTGTCGCCAGCTAGCC 61.648 60.000 12.13 0.00 0.00 3.93
178 179 0.674895 CTTTTGTCGCCAGCTAGCCT 60.675 55.000 12.13 0.00 0.00 4.58
179 180 0.611200 TTTTGTCGCCAGCTAGCCTA 59.389 50.000 12.13 0.00 0.00 3.93
180 181 0.611200 TTTGTCGCCAGCTAGCCTAA 59.389 50.000 12.13 0.00 0.00 2.69
181 182 0.108329 TTGTCGCCAGCTAGCCTAAC 60.108 55.000 12.13 3.82 0.00 2.34
182 183 1.227292 GTCGCCAGCTAGCCTAACC 60.227 63.158 12.13 0.00 0.00 2.85
183 184 2.109181 CGCCAGCTAGCCTAACCC 59.891 66.667 12.13 0.00 0.00 4.11
184 185 2.511403 GCCAGCTAGCCTAACCCC 59.489 66.667 12.13 0.00 0.00 4.95
185 186 2.822399 CCAGCTAGCCTAACCCCG 59.178 66.667 12.13 0.00 0.00 5.73
186 187 2.064581 CCAGCTAGCCTAACCCCGT 61.065 63.158 12.13 0.00 0.00 5.28
187 188 1.623542 CCAGCTAGCCTAACCCCGTT 61.624 60.000 12.13 0.00 0.00 4.44
188 189 0.179081 CAGCTAGCCTAACCCCGTTC 60.179 60.000 12.13 0.00 0.00 3.95
189 190 1.227176 GCTAGCCTAACCCCGTTCG 60.227 63.158 2.29 0.00 0.00 3.95
190 191 1.227176 CTAGCCTAACCCCGTTCGC 60.227 63.158 0.00 0.00 0.00 4.70
191 192 2.948840 CTAGCCTAACCCCGTTCGCG 62.949 65.000 0.00 0.00 40.93 5.87
193 194 4.446413 CCTAACCCCGTTCGCGCT 62.446 66.667 5.56 0.00 39.70 5.92
194 195 2.884207 CTAACCCCGTTCGCGCTC 60.884 66.667 5.56 0.00 39.70 5.03
195 196 3.636313 CTAACCCCGTTCGCGCTCA 62.636 63.158 5.56 0.00 39.70 4.26
196 197 3.223710 TAACCCCGTTCGCGCTCAA 62.224 57.895 5.56 0.00 39.70 3.02
201 202 4.430423 CGTTCGCGCTCAAGCCAC 62.430 66.667 5.56 0.00 37.91 5.01
202 203 3.345808 GTTCGCGCTCAAGCCACA 61.346 61.111 5.56 0.00 37.91 4.17
203 204 3.345808 TTCGCGCTCAAGCCACAC 61.346 61.111 5.56 0.00 37.91 3.82
211 212 1.299541 CTCAAGCCACACGTTCTTGT 58.700 50.000 13.06 0.00 38.56 3.16
235 242 0.165295 GAAGCCACGCGAAAAGTACC 59.835 55.000 15.93 0.00 0.00 3.34
249 256 0.036875 AGTACCAGGGAAGCTTGTGC 59.963 55.000 2.10 0.00 40.05 4.57
272 279 4.807834 CGCAGCTAGAGAAATTCAATCTCA 59.192 41.667 8.07 0.00 44.64 3.27
277 284 7.656542 CAGCTAGAGAAATTCAATCTCATGCTA 59.343 37.037 17.28 1.29 44.77 3.49
282 289 9.842775 AGAGAAATTCAATCTCATGCTATAACA 57.157 29.630 8.07 0.00 44.64 2.41
299 314 3.955650 AACAGCATTGGACGTACTACT 57.044 42.857 0.00 0.00 0.00 2.57
300 315 6.704289 ATAACAGCATTGGACGTACTACTA 57.296 37.500 0.00 0.00 0.00 1.82
311 326 1.745141 CGTACTACTAGGCTCGTGGGT 60.745 57.143 7.42 6.25 0.00 4.51
320 335 4.680237 CTCGTGGGTTCAGCGGCA 62.680 66.667 1.45 0.00 0.00 5.69
345 363 9.072294 CACTTTTACTGTTTCGAGTTTGATTTT 57.928 29.630 0.00 0.00 0.00 1.82
346 364 9.634163 ACTTTTACTGTTTCGAGTTTGATTTTT 57.366 25.926 0.00 0.00 0.00 1.94
348 366 9.627395 TTTTACTGTTTCGAGTTTGATTTTTCA 57.373 25.926 0.00 0.00 0.00 2.69
349 367 8.609478 TTACTGTTTCGAGTTTGATTTTTCAC 57.391 30.769 0.00 0.00 0.00 3.18
350 368 6.033966 ACTGTTTCGAGTTTGATTTTTCACC 58.966 36.000 0.00 0.00 0.00 4.02
351 369 5.955488 TGTTTCGAGTTTGATTTTTCACCA 58.045 33.333 0.00 0.00 0.00 4.17
352 370 5.802956 TGTTTCGAGTTTGATTTTTCACCAC 59.197 36.000 0.00 0.00 0.00 4.16
353 371 4.203950 TCGAGTTTGATTTTTCACCACG 57.796 40.909 0.00 0.00 0.00 4.94
354 372 3.002862 TCGAGTTTGATTTTTCACCACGG 59.997 43.478 0.00 0.00 0.00 4.94
358 376 4.023193 AGTTTGATTTTTCACCACGGCTAG 60.023 41.667 0.00 0.00 0.00 3.42
359 377 1.810151 TGATTTTTCACCACGGCTAGC 59.190 47.619 6.04 6.04 0.00 3.42
360 378 0.802494 ATTTTTCACCACGGCTAGCG 59.198 50.000 9.00 6.83 0.00 4.26
437 459 4.657824 ACGTCAGCCGGTTCCGTG 62.658 66.667 11.05 3.29 42.24 4.94
481 503 3.369242 AAGTTACTCCTCCTACGCTCT 57.631 47.619 0.00 0.00 0.00 4.09
482 504 2.921821 AGTTACTCCTCCTACGCTCTC 58.078 52.381 0.00 0.00 0.00 3.20
483 505 1.948834 GTTACTCCTCCTACGCTCTCC 59.051 57.143 0.00 0.00 0.00 3.71
485 507 1.894756 CTCCTCCTACGCTCTCCCG 60.895 68.421 0.00 0.00 0.00 5.14
527 559 0.672342 AGTTACGTGAAGTGTCGCCT 59.328 50.000 0.00 0.00 0.00 5.52
528 560 1.058404 GTTACGTGAAGTGTCGCCTC 58.942 55.000 0.00 0.00 0.00 4.70
529 561 0.669619 TTACGTGAAGTGTCGCCTCA 59.330 50.000 0.00 0.00 0.00 3.86
530 562 0.240145 TACGTGAAGTGTCGCCTCAG 59.760 55.000 0.00 0.00 0.00 3.35
531 563 1.734477 CGTGAAGTGTCGCCTCAGG 60.734 63.158 0.00 0.00 0.00 3.86
548 583 2.827642 GCAGGCAGGCTCCATCAC 60.828 66.667 0.00 0.00 0.00 3.06
570 605 3.426191 CACACGCAAAATGAATGAACCAG 59.574 43.478 0.00 0.00 0.00 4.00
574 616 2.289569 GCAAAATGAATGAACCAGCCCA 60.290 45.455 0.00 0.00 0.00 5.36
627 670 4.056125 GCCCAAGCAAACCCTCGC 62.056 66.667 0.00 0.00 39.53 5.03
628 671 3.373565 CCCAAGCAAACCCTCGCC 61.374 66.667 0.00 0.00 0.00 5.54
629 672 2.282462 CCAAGCAAACCCTCGCCT 60.282 61.111 0.00 0.00 0.00 5.52
630 673 2.335712 CCAAGCAAACCCTCGCCTC 61.336 63.158 0.00 0.00 0.00 4.70
631 674 2.358737 AAGCAAACCCTCGCCTCG 60.359 61.111 0.00 0.00 0.00 4.63
632 675 3.178540 AAGCAAACCCTCGCCTCGT 62.179 57.895 0.00 0.00 0.00 4.18
633 676 1.823169 AAGCAAACCCTCGCCTCGTA 61.823 55.000 0.00 0.00 0.00 3.43
635 678 1.290955 CAAACCCTCGCCTCGTACA 59.709 57.895 0.00 0.00 0.00 2.90
636 679 1.012486 CAAACCCTCGCCTCGTACAC 61.012 60.000 0.00 0.00 0.00 2.90
638 681 4.849329 CCCTCGCCTCGTACACGC 62.849 72.222 0.00 0.00 39.60 5.34
703 765 3.398406 GCCCAAATTCAAAATCAACGGT 58.602 40.909 0.00 0.00 0.00 4.83
704 766 3.431912 GCCCAAATTCAAAATCAACGGTC 59.568 43.478 0.00 0.00 0.00 4.79
705 767 3.672867 CCCAAATTCAAAATCAACGGTCG 59.327 43.478 0.00 0.00 0.00 4.79
706 768 3.121113 CCAAATTCAAAATCAACGGTCGC 59.879 43.478 0.00 0.00 0.00 5.19
707 769 2.629639 ATTCAAAATCAACGGTCGCC 57.370 45.000 0.00 0.00 0.00 5.54
708 770 0.594110 TTCAAAATCAACGGTCGCCC 59.406 50.000 0.00 0.00 0.00 6.13
709 771 0.250553 TCAAAATCAACGGTCGCCCT 60.251 50.000 0.00 0.00 0.00 5.19
710 772 0.109781 CAAAATCAACGGTCGCCCTG 60.110 55.000 0.00 0.00 0.00 4.45
711 773 1.862602 AAAATCAACGGTCGCCCTGC 61.863 55.000 0.00 0.00 0.00 4.85
712 774 4.778143 ATCAACGGTCGCCCTGCC 62.778 66.667 0.00 0.00 0.00 4.85
730 792 0.389296 CCCCGGCGGAAATTCAAAAC 60.389 55.000 30.79 0.00 0.00 2.43
739 801 2.609491 GGAAATTCAAAACCAGGCCGAC 60.609 50.000 0.00 0.00 0.00 4.79
740 802 0.596082 AATTCAAAACCAGGCCGACG 59.404 50.000 0.00 0.00 0.00 5.12
741 803 1.241315 ATTCAAAACCAGGCCGACGG 61.241 55.000 10.29 10.29 0.00 4.79
809 877 1.448540 CGCCCATCACTGACTCACC 60.449 63.158 0.00 0.00 0.00 4.02
810 878 1.078143 GCCCATCACTGACTCACCC 60.078 63.158 0.00 0.00 0.00 4.61
811 879 1.841302 GCCCATCACTGACTCACCCA 61.841 60.000 0.00 0.00 0.00 4.51
813 881 0.390340 CCATCACTGACTCACCCACG 60.390 60.000 0.00 0.00 0.00 4.94
814 882 1.016130 CATCACTGACTCACCCACGC 61.016 60.000 0.00 0.00 0.00 5.34
816 884 3.626924 ACTGACTCACCCACGCCC 61.627 66.667 0.00 0.00 0.00 6.13
844 922 0.464916 CCCTACATAAACCCCGGCAC 60.465 60.000 0.00 0.00 0.00 5.01
950 1029 1.078426 AAAATCGGCTCCACCTCCG 60.078 57.895 0.00 0.00 46.52 4.63
951 1030 2.536997 AAAATCGGCTCCACCTCCGG 62.537 60.000 0.00 0.00 45.31 5.14
1788 2233 1.210234 TGCTCCATCATGGACGTCATT 59.790 47.619 18.91 0.07 42.67 2.57
2378 2827 2.932614 CAAAGATCACCGCCTACTTCAG 59.067 50.000 0.00 0.00 0.00 3.02
3150 3602 2.029844 GCAGAGCTTCACGGTGACC 61.030 63.158 10.97 5.13 0.00 4.02
3286 3745 1.132945 TCTAAATCGGTAGGGAGGGGG 60.133 57.143 0.00 0.00 0.00 5.40
3498 3966 4.752661 TTAACCCGTGAAATGTAGCAAC 57.247 40.909 0.00 0.00 0.00 4.17
3500 3968 1.877443 ACCCGTGAAATGTAGCAACAC 59.123 47.619 0.00 0.00 38.78 3.32
3505 3973 3.363970 CGTGAAATGTAGCAACACCTGAC 60.364 47.826 0.00 0.00 38.78 3.51
3548 4047 8.138928 TCACTCCAATTCTTTCTTCAGATAGA 57.861 34.615 0.00 0.00 31.79 1.98
3549 4048 8.597167 TCACTCCAATTCTTTCTTCAGATAGAA 58.403 33.333 10.88 10.88 42.98 2.10
3550 4049 9.224267 CACTCCAATTCTTTCTTCAGATAGAAA 57.776 33.333 12.09 0.00 42.42 2.52
3551 4050 9.799106 ACTCCAATTCTTTCTTCAGATAGAAAA 57.201 29.630 12.09 0.00 42.42 2.29
3685 4188 4.949856 GGGAGGAGCACATTTCATTTCTTA 59.050 41.667 0.00 0.00 0.00 2.10
3735 4240 8.355169 CAATTTCTTTCTTGAGGAATGAACAGA 58.645 33.333 5.35 0.00 43.23 3.41
3746 4251 3.120511 GGAATGAACAGAGTGCTCGTTTC 60.121 47.826 9.45 8.79 34.09 2.78
3752 4257 3.385577 ACAGAGTGCTCGTTTCTTCTTC 58.614 45.455 0.00 0.00 34.09 2.87
3767 4273 7.413000 CGTTTCTTCTTCAGACAAAAACAGAGA 60.413 37.037 0.00 0.00 0.00 3.10
3773 4279 4.956085 TCAGACAAAAACAGAGAATCCGA 58.044 39.130 0.00 0.00 33.66 4.55
3805 4311 0.320160 GTTAGGCAACCGTTCGGACT 60.320 55.000 18.28 11.65 37.17 3.85
3811 4317 2.437396 AACCGTTCGGACTGGTGGT 61.437 57.895 18.28 0.00 34.46 4.16
3817 4323 2.618053 GTTCGGACTGGTGGTATTGAG 58.382 52.381 0.00 0.00 0.00 3.02
3892 4404 0.742990 CCAACGCGCTTAGGGATGAA 60.743 55.000 5.73 0.00 37.70 2.57
3893 4405 1.299541 CAACGCGCTTAGGGATGAAT 58.700 50.000 5.73 0.00 37.70 2.57
3894 4406 1.003545 CAACGCGCTTAGGGATGAATG 60.004 52.381 5.73 0.00 37.70 2.67
3895 4407 0.464036 ACGCGCTTAGGGATGAATGA 59.536 50.000 5.73 0.00 36.53 2.57
3906 4418 3.520721 AGGGATGAATGAGATGACACACA 59.479 43.478 0.00 0.00 0.00 3.72
3907 4419 3.875727 GGGATGAATGAGATGACACACAG 59.124 47.826 0.00 0.00 0.00 3.66
3911 4423 2.105006 ATGAGATGACACACAGTGGC 57.895 50.000 5.31 0.00 42.82 5.01
3952 4464 9.877178 TTTTTAATCGTTTATGCCATTGGTTAT 57.123 25.926 4.26 2.47 0.00 1.89
3953 4465 8.864069 TTTAATCGTTTATGCCATTGGTTATG 57.136 30.769 4.26 0.00 0.00 1.90
3954 4466 6.463995 AATCGTTTATGCCATTGGTTATGT 57.536 33.333 4.26 0.00 31.99 2.29
3955 4467 5.493133 TCGTTTATGCCATTGGTTATGTC 57.507 39.130 4.26 0.00 31.99 3.06
3956 4468 5.189928 TCGTTTATGCCATTGGTTATGTCT 58.810 37.500 4.26 0.00 31.99 3.41
3957 4469 5.295787 TCGTTTATGCCATTGGTTATGTCTC 59.704 40.000 4.26 0.00 31.99 3.36
3958 4470 5.065859 CGTTTATGCCATTGGTTATGTCTCA 59.934 40.000 4.26 0.00 31.99 3.27
3959 4471 6.265577 GTTTATGCCATTGGTTATGTCTCAC 58.734 40.000 4.26 0.00 31.99 3.51
3960 4472 3.719268 TGCCATTGGTTATGTCTCACT 57.281 42.857 4.26 0.00 31.99 3.41
3961 4473 4.835284 TGCCATTGGTTATGTCTCACTA 57.165 40.909 4.26 0.00 31.99 2.74
3962 4474 5.372343 TGCCATTGGTTATGTCTCACTAT 57.628 39.130 4.26 0.00 31.99 2.12
3963 4475 5.754782 TGCCATTGGTTATGTCTCACTATT 58.245 37.500 4.26 0.00 31.99 1.73
3964 4476 5.822519 TGCCATTGGTTATGTCTCACTATTC 59.177 40.000 4.26 0.00 31.99 1.75
3965 4477 5.822519 GCCATTGGTTATGTCTCACTATTCA 59.177 40.000 4.26 0.00 31.99 2.57
3966 4478 6.017605 GCCATTGGTTATGTCTCACTATTCAG 60.018 42.308 4.26 0.00 31.99 3.02
3967 4479 6.017605 CCATTGGTTATGTCTCACTATTCAGC 60.018 42.308 0.00 0.00 31.99 4.26
3968 4480 5.939764 TGGTTATGTCTCACTATTCAGCT 57.060 39.130 0.00 0.00 0.00 4.24
3969 4481 6.299805 TGGTTATGTCTCACTATTCAGCTT 57.700 37.500 0.00 0.00 0.00 3.74
3970 4482 6.711277 TGGTTATGTCTCACTATTCAGCTTT 58.289 36.000 0.00 0.00 0.00 3.51
3971 4483 6.595326 TGGTTATGTCTCACTATTCAGCTTTG 59.405 38.462 0.00 0.00 0.00 2.77
3972 4484 6.457528 GGTTATGTCTCACTATTCAGCTTTGC 60.458 42.308 0.00 0.00 0.00 3.68
3973 4485 3.338249 TGTCTCACTATTCAGCTTTGCC 58.662 45.455 0.00 0.00 0.00 4.52
3974 4486 3.244526 TGTCTCACTATTCAGCTTTGCCA 60.245 43.478 0.00 0.00 0.00 4.92
3975 4487 3.126000 GTCTCACTATTCAGCTTTGCCAC 59.874 47.826 0.00 0.00 0.00 5.01
3976 4488 3.008375 TCTCACTATTCAGCTTTGCCACT 59.992 43.478 0.00 0.00 0.00 4.00
3977 4489 4.222810 TCTCACTATTCAGCTTTGCCACTA 59.777 41.667 0.00 0.00 0.00 2.74
3978 4490 4.507710 TCACTATTCAGCTTTGCCACTAG 58.492 43.478 0.00 0.00 0.00 2.57
3979 4491 4.222810 TCACTATTCAGCTTTGCCACTAGA 59.777 41.667 0.00 0.00 0.00 2.43
3980 4492 4.937620 CACTATTCAGCTTTGCCACTAGAA 59.062 41.667 0.00 0.00 0.00 2.10
3981 4493 5.412594 CACTATTCAGCTTTGCCACTAGAAA 59.587 40.000 0.00 0.00 0.00 2.52
3982 4494 6.003950 ACTATTCAGCTTTGCCACTAGAAAA 58.996 36.000 0.00 0.00 0.00 2.29
3983 4495 5.990120 ATTCAGCTTTGCCACTAGAAAAT 57.010 34.783 0.00 0.00 0.00 1.82
3984 4496 5.789643 TTCAGCTTTGCCACTAGAAAATT 57.210 34.783 0.00 0.00 0.00 1.82
3985 4497 5.789643 TCAGCTTTGCCACTAGAAAATTT 57.210 34.783 0.00 0.00 0.00 1.82
3986 4498 6.892658 TCAGCTTTGCCACTAGAAAATTTA 57.107 33.333 0.00 0.00 0.00 1.40
3987 4499 6.913170 TCAGCTTTGCCACTAGAAAATTTAG 58.087 36.000 0.00 0.00 0.00 1.85
3988 4500 6.490040 TCAGCTTTGCCACTAGAAAATTTAGT 59.510 34.615 0.00 0.00 0.00 2.24
3989 4501 7.014230 TCAGCTTTGCCACTAGAAAATTTAGTT 59.986 33.333 0.00 0.00 0.00 2.24
3990 4502 7.115378 CAGCTTTGCCACTAGAAAATTTAGTTG 59.885 37.037 0.00 0.00 0.00 3.16
3991 4503 6.128822 GCTTTGCCACTAGAAAATTTAGTTGC 60.129 38.462 0.00 8.13 39.15 4.17
3992 4504 6.398234 TTGCCACTAGAAAATTTAGTTGCA 57.602 33.333 12.08 12.08 43.69 4.08
3993 4505 6.588719 TGCCACTAGAAAATTTAGTTGCAT 57.411 33.333 12.08 0.00 41.82 3.96
3994 4506 7.695480 TGCCACTAGAAAATTTAGTTGCATA 57.305 32.000 12.08 0.00 41.82 3.14
3995 4507 8.116651 TGCCACTAGAAAATTTAGTTGCATAA 57.883 30.769 12.08 0.00 41.82 1.90
3996 4508 8.580720 TGCCACTAGAAAATTTAGTTGCATAAA 58.419 29.630 12.08 0.00 41.82 1.40
3997 4509 9.418045 GCCACTAGAAAATTTAGTTGCATAAAA 57.582 29.630 9.59 0.00 38.78 1.52
4003 4515 9.282569 AGAAAATTTAGTTGCATAAAAATGGCA 57.717 25.926 0.00 0.00 35.41 4.92
4006 4518 9.843334 AAATTTAGTTGCATAAAAATGGCATTG 57.157 25.926 14.47 2.32 37.39 2.82
4007 4519 4.950434 AGTTGCATAAAAATGGCATTGC 57.050 36.364 14.47 13.57 37.39 3.56
4008 4520 4.581868 AGTTGCATAAAAATGGCATTGCT 58.418 34.783 14.47 6.52 37.39 3.91
4009 4521 5.005094 AGTTGCATAAAAATGGCATTGCTT 58.995 33.333 14.47 12.53 37.39 3.91
4010 4522 5.122711 AGTTGCATAAAAATGGCATTGCTTC 59.877 36.000 14.47 9.95 37.39 3.86
4011 4523 3.617706 TGCATAAAAATGGCATTGCTTCG 59.382 39.130 14.47 4.30 31.58 3.79
4012 4524 3.618150 GCATAAAAATGGCATTGCTTCGT 59.382 39.130 14.47 0.00 0.00 3.85
4013 4525 4.093261 GCATAAAAATGGCATTGCTTCGTT 59.907 37.500 14.47 0.00 0.00 3.85
4014 4526 5.290643 GCATAAAAATGGCATTGCTTCGTTA 59.709 36.000 14.47 6.39 0.00 3.18
4015 4527 6.508404 GCATAAAAATGGCATTGCTTCGTTAG 60.508 38.462 14.47 0.00 0.00 2.34
4016 4528 3.508744 AAATGGCATTGCTTCGTTAGG 57.491 42.857 14.47 0.00 0.00 2.69
4017 4529 0.740737 ATGGCATTGCTTCGTTAGGC 59.259 50.000 8.82 0.00 0.00 3.93
4018 4530 1.062525 GGCATTGCTTCGTTAGGCG 59.937 57.895 8.82 0.00 43.01 5.52
4027 4539 3.824621 TCGTTAGGCGATTGCTCAA 57.175 47.368 4.59 0.00 45.68 3.02
4028 4540 2.087501 TCGTTAGGCGATTGCTCAAA 57.912 45.000 4.59 0.00 45.68 2.69
4029 4541 2.418692 TCGTTAGGCGATTGCTCAAAA 58.581 42.857 4.59 0.00 45.68 2.44
4030 4542 3.006940 TCGTTAGGCGATTGCTCAAAAT 58.993 40.909 4.59 0.00 45.68 1.82
4031 4543 3.100817 CGTTAGGCGATTGCTCAAAATG 58.899 45.455 4.59 0.00 44.77 2.32
4032 4544 2.849880 TAGGCGATTGCTCAAAATGC 57.150 45.000 4.59 0.00 42.25 3.56
4033 4545 0.174162 AGGCGATTGCTCAAAATGCC 59.826 50.000 4.59 12.32 42.25 4.40
4034 4546 0.108709 GGCGATTGCTCAAAATGCCA 60.109 50.000 4.59 0.00 42.25 4.92
4035 4547 0.994263 GCGATTGCTCAAAATGCCAC 59.006 50.000 0.00 0.00 38.39 5.01
4036 4548 1.403249 GCGATTGCTCAAAATGCCACT 60.403 47.619 0.00 0.00 38.39 4.00
4037 4549 2.256174 CGATTGCTCAAAATGCCACTG 58.744 47.619 0.00 0.00 0.00 3.66
4038 4550 2.352030 CGATTGCTCAAAATGCCACTGT 60.352 45.455 0.00 0.00 0.00 3.55
4039 4551 2.512485 TTGCTCAAAATGCCACTGTG 57.488 45.000 0.00 0.00 0.00 3.66
4040 4552 1.689984 TGCTCAAAATGCCACTGTGA 58.310 45.000 9.86 0.00 0.00 3.58
4041 4553 2.030371 TGCTCAAAATGCCACTGTGAA 58.970 42.857 9.86 0.00 0.00 3.18
4042 4554 2.223782 TGCTCAAAATGCCACTGTGAAC 60.224 45.455 9.86 1.47 0.00 3.18
4043 4555 2.863704 GCTCAAAATGCCACTGTGAACC 60.864 50.000 9.86 0.00 0.00 3.62
4044 4556 2.361757 CTCAAAATGCCACTGTGAACCA 59.638 45.455 9.86 3.91 0.00 3.67
4045 4557 2.964464 TCAAAATGCCACTGTGAACCAT 59.036 40.909 9.86 6.10 0.00 3.55
4046 4558 3.387374 TCAAAATGCCACTGTGAACCATT 59.613 39.130 9.86 11.46 0.00 3.16
4047 4559 4.586421 TCAAAATGCCACTGTGAACCATTA 59.414 37.500 9.86 0.00 0.00 1.90
4048 4560 4.519540 AAATGCCACTGTGAACCATTAC 57.480 40.909 9.86 0.00 0.00 1.89
4049 4561 2.949177 TGCCACTGTGAACCATTACT 57.051 45.000 9.86 0.00 0.00 2.24
4050 4562 2.503331 TGCCACTGTGAACCATTACTG 58.497 47.619 9.86 0.00 0.00 2.74
4051 4563 2.158682 TGCCACTGTGAACCATTACTGT 60.159 45.455 9.86 0.00 0.00 3.55
4052 4564 2.484264 GCCACTGTGAACCATTACTGTC 59.516 50.000 9.86 0.00 0.00 3.51
4053 4565 3.738982 CCACTGTGAACCATTACTGTCA 58.261 45.455 9.86 0.00 0.00 3.58
4054 4566 4.133820 CCACTGTGAACCATTACTGTCAA 58.866 43.478 9.86 0.00 0.00 3.18
4055 4567 4.761739 CCACTGTGAACCATTACTGTCAAT 59.238 41.667 9.86 0.00 0.00 2.57
4056 4568 5.241506 CCACTGTGAACCATTACTGTCAATT 59.758 40.000 9.86 0.00 0.00 2.32
4057 4569 6.373779 CACTGTGAACCATTACTGTCAATTC 58.626 40.000 0.32 0.00 0.00 2.17
4058 4570 6.017192 CACTGTGAACCATTACTGTCAATTCA 60.017 38.462 0.32 0.00 0.00 2.57
4059 4571 6.545666 ACTGTGAACCATTACTGTCAATTCAA 59.454 34.615 0.00 0.00 0.00 2.69
4060 4572 7.068103 ACTGTGAACCATTACTGTCAATTCAAA 59.932 33.333 0.00 0.00 0.00 2.69
4061 4573 7.950512 TGTGAACCATTACTGTCAATTCAAAT 58.049 30.769 0.00 0.00 0.00 2.32
4062 4574 8.081633 TGTGAACCATTACTGTCAATTCAAATC 58.918 33.333 0.00 0.00 0.00 2.17
4063 4575 8.299570 GTGAACCATTACTGTCAATTCAAATCT 58.700 33.333 0.00 0.00 0.00 2.40
4064 4576 8.859090 TGAACCATTACTGTCAATTCAAATCTT 58.141 29.630 0.00 0.00 0.00 2.40
4065 4577 9.132521 GAACCATTACTGTCAATTCAAATCTTG 57.867 33.333 0.00 0.00 0.00 3.02
4066 4578 8.181904 ACCATTACTGTCAATTCAAATCTTGT 57.818 30.769 0.00 0.00 0.00 3.16
4067 4579 8.641541 ACCATTACTGTCAATTCAAATCTTGTT 58.358 29.630 0.00 0.00 0.00 2.83
4068 4580 9.480053 CCATTACTGTCAATTCAAATCTTGTTT 57.520 29.630 0.00 0.00 0.00 2.83
4070 4582 6.833342 ACTGTCAATTCAAATCTTGTTTGC 57.167 33.333 0.00 0.00 0.00 3.68
4071 4583 5.754890 ACTGTCAATTCAAATCTTGTTTGCC 59.245 36.000 0.00 0.00 0.00 4.52
4072 4584 5.668471 TGTCAATTCAAATCTTGTTTGCCA 58.332 33.333 0.00 0.00 0.00 4.92
4073 4585 6.289834 TGTCAATTCAAATCTTGTTTGCCAT 58.710 32.000 0.00 0.00 0.00 4.40
4074 4586 6.203145 TGTCAATTCAAATCTTGTTTGCCATG 59.797 34.615 0.00 0.00 0.00 3.66
4075 4587 6.203338 GTCAATTCAAATCTTGTTTGCCATGT 59.797 34.615 0.00 0.00 0.00 3.21
4076 4588 6.766944 TCAATTCAAATCTTGTTTGCCATGTT 59.233 30.769 0.00 0.00 0.00 2.71
4077 4589 7.930325 TCAATTCAAATCTTGTTTGCCATGTTA 59.070 29.630 0.00 0.00 0.00 2.41
4078 4590 8.723311 CAATTCAAATCTTGTTTGCCATGTTAT 58.277 29.630 0.00 0.00 0.00 1.89
4079 4591 9.941325 AATTCAAATCTTGTTTGCCATGTTATA 57.059 25.926 0.00 0.00 0.00 0.98
4080 4592 9.941325 ATTCAAATCTTGTTTGCCATGTTATAA 57.059 25.926 0.00 0.00 0.00 0.98
4081 4593 9.941325 TTCAAATCTTGTTTGCCATGTTATAAT 57.059 25.926 0.00 0.00 0.00 1.28
4082 4594 9.368674 TCAAATCTTGTTTGCCATGTTATAATG 57.631 29.630 0.00 0.00 0.00 1.90
4083 4595 9.368674 CAAATCTTGTTTGCCATGTTATAATGA 57.631 29.630 0.00 0.00 0.00 2.57
4084 4596 8.931385 AATCTTGTTTGCCATGTTATAATGAC 57.069 30.769 0.00 0.00 0.00 3.06
4085 4597 7.459795 TCTTGTTTGCCATGTTATAATGACA 57.540 32.000 0.00 0.00 0.00 3.58
4086 4598 7.890515 TCTTGTTTGCCATGTTATAATGACAA 58.109 30.769 0.00 0.00 29.38 3.18
4087 4599 8.363390 TCTTGTTTGCCATGTTATAATGACAAA 58.637 29.630 0.00 0.00 37.51 2.83
4088 4600 8.893219 TTGTTTGCCATGTTATAATGACAAAA 57.107 26.923 3.14 0.00 40.23 2.44
4089 4601 8.893219 TGTTTGCCATGTTATAATGACAAAAA 57.107 26.923 3.14 0.00 40.23 1.94
4090 4602 9.499479 TGTTTGCCATGTTATAATGACAAAAAT 57.501 25.926 3.14 0.00 40.23 1.82
4115 4627 7.847711 ATCTATAGACCAACATGTTAGCTCT 57.152 36.000 11.53 12.79 0.00 4.09
4116 4628 7.661536 TCTATAGACCAACATGTTAGCTCTT 57.338 36.000 11.53 3.64 0.00 2.85
4117 4629 8.079211 TCTATAGACCAACATGTTAGCTCTTT 57.921 34.615 11.53 8.66 0.00 2.52
4118 4630 8.198109 TCTATAGACCAACATGTTAGCTCTTTC 58.802 37.037 11.53 0.00 0.00 2.62
4119 4631 5.234466 AGACCAACATGTTAGCTCTTTCT 57.766 39.130 11.53 0.00 0.00 2.52
4120 4632 4.999950 AGACCAACATGTTAGCTCTTTCTG 59.000 41.667 11.53 0.00 0.00 3.02
4121 4633 4.718961 ACCAACATGTTAGCTCTTTCTGT 58.281 39.130 11.53 0.00 0.00 3.41
4122 4634 5.865085 ACCAACATGTTAGCTCTTTCTGTA 58.135 37.500 11.53 0.00 0.00 2.74
4123 4635 6.476378 ACCAACATGTTAGCTCTTTCTGTAT 58.524 36.000 11.53 0.00 0.00 2.29
4124 4636 6.595716 ACCAACATGTTAGCTCTTTCTGTATC 59.404 38.462 11.53 0.00 0.00 2.24
4125 4637 6.820656 CCAACATGTTAGCTCTTTCTGTATCT 59.179 38.462 11.53 0.00 0.00 1.98
4126 4638 7.010923 CCAACATGTTAGCTCTTTCTGTATCTC 59.989 40.741 11.53 0.00 0.00 2.75
4127 4639 7.175347 ACATGTTAGCTCTTTCTGTATCTCA 57.825 36.000 0.00 0.00 0.00 3.27
4128 4640 7.038659 ACATGTTAGCTCTTTCTGTATCTCAC 58.961 38.462 0.00 0.00 0.00 3.51
4129 4641 5.967088 TGTTAGCTCTTTCTGTATCTCACC 58.033 41.667 0.00 0.00 0.00 4.02
4130 4642 5.480422 TGTTAGCTCTTTCTGTATCTCACCA 59.520 40.000 0.00 0.00 0.00 4.17
4131 4643 4.464069 AGCTCTTTCTGTATCTCACCAC 57.536 45.455 0.00 0.00 0.00 4.16
4132 4644 3.834813 AGCTCTTTCTGTATCTCACCACA 59.165 43.478 0.00 0.00 0.00 4.17
4133 4645 4.284490 AGCTCTTTCTGTATCTCACCACAA 59.716 41.667 0.00 0.00 0.00 3.33
4134 4646 5.046014 AGCTCTTTCTGTATCTCACCACAAT 60.046 40.000 0.00 0.00 0.00 2.71
4135 4647 6.155221 AGCTCTTTCTGTATCTCACCACAATA 59.845 38.462 0.00 0.00 0.00 1.90
4136 4648 6.818644 GCTCTTTCTGTATCTCACCACAATAA 59.181 38.462 0.00 0.00 0.00 1.40
4137 4649 7.334421 GCTCTTTCTGTATCTCACCACAATAAA 59.666 37.037 0.00 0.00 0.00 1.40
4138 4650 8.777865 TCTTTCTGTATCTCACCACAATAAAG 57.222 34.615 0.00 0.00 33.36 1.85
4139 4651 8.375506 TCTTTCTGTATCTCACCACAATAAAGT 58.624 33.333 0.00 0.00 33.58 2.66
4140 4652 7.905604 TTCTGTATCTCACCACAATAAAGTG 57.094 36.000 0.00 0.00 39.21 3.16
4141 4653 7.004555 TCTGTATCTCACCACAATAAAGTGT 57.995 36.000 0.00 0.00 37.82 3.55
4142 4654 6.873605 TCTGTATCTCACCACAATAAAGTGTG 59.126 38.462 3.65 3.65 46.98 3.82
4150 4662 4.749245 CACAATAAAGTGTGGGTCTCAC 57.251 45.455 2.71 0.00 44.29 3.51
4151 4663 4.389374 CACAATAAAGTGTGGGTCTCACT 58.611 43.478 4.09 0.27 46.20 3.41
4157 4669 1.625818 AGTGTGGGTCTCACTTGATCC 59.374 52.381 4.09 0.00 46.20 3.36
4158 4670 0.984230 TGTGGGTCTCACTTGATCCC 59.016 55.000 4.09 10.84 46.20 3.85
4159 4671 0.984230 GTGGGTCTCACTTGATCCCA 59.016 55.000 14.58 14.58 41.95 4.37
4160 4672 1.351017 GTGGGTCTCACTTGATCCCAA 59.649 52.381 18.18 6.07 43.95 4.12
4161 4673 1.351017 TGGGTCTCACTTGATCCCAAC 59.649 52.381 15.64 0.00 41.57 3.77
4162 4674 1.351017 GGGTCTCACTTGATCCCAACA 59.649 52.381 12.20 0.00 37.74 3.33
4163 4675 2.224769 GGGTCTCACTTGATCCCAACAA 60.225 50.000 12.20 0.00 37.74 2.83
4164 4676 3.562176 GGGTCTCACTTGATCCCAACAAT 60.562 47.826 12.20 0.00 37.74 2.71
4165 4677 3.441572 GGTCTCACTTGATCCCAACAATG 59.558 47.826 0.00 0.00 0.00 2.82
4166 4678 4.074970 GTCTCACTTGATCCCAACAATGT 58.925 43.478 0.00 0.00 0.00 2.71
4167 4679 4.520492 GTCTCACTTGATCCCAACAATGTT 59.480 41.667 0.00 0.00 0.00 2.71
4168 4680 4.761739 TCTCACTTGATCCCAACAATGTTC 59.238 41.667 0.00 0.00 0.00 3.18
4169 4681 4.728772 TCACTTGATCCCAACAATGTTCT 58.271 39.130 0.00 0.00 0.00 3.01
4170 4682 5.139727 TCACTTGATCCCAACAATGTTCTT 58.860 37.500 0.00 0.00 0.00 2.52
4171 4683 6.303054 TCACTTGATCCCAACAATGTTCTTA 58.697 36.000 0.00 0.00 0.00 2.10
4172 4684 6.947733 TCACTTGATCCCAACAATGTTCTTAT 59.052 34.615 0.00 0.00 0.00 1.73
4173 4685 7.451255 TCACTTGATCCCAACAATGTTCTTATT 59.549 33.333 0.00 0.00 0.00 1.40
4174 4686 8.090214 CACTTGATCCCAACAATGTTCTTATTT 58.910 33.333 0.00 0.00 0.00 1.40
4175 4687 8.650490 ACTTGATCCCAACAATGTTCTTATTTT 58.350 29.630 0.00 0.00 0.00 1.82
4176 4688 9.143631 CTTGATCCCAACAATGTTCTTATTTTC 57.856 33.333 0.00 0.00 0.00 2.29
4177 4689 8.421249 TGATCCCAACAATGTTCTTATTTTCT 57.579 30.769 0.00 0.00 0.00 2.52
4178 4690 8.522830 TGATCCCAACAATGTTCTTATTTTCTC 58.477 33.333 0.00 0.00 0.00 2.87
4179 4691 8.655935 ATCCCAACAATGTTCTTATTTTCTCT 57.344 30.769 0.00 0.00 0.00 3.10
4180 4692 9.753674 ATCCCAACAATGTTCTTATTTTCTCTA 57.246 29.630 0.00 0.00 0.00 2.43
4181 4693 9.581289 TCCCAACAATGTTCTTATTTTCTCTAA 57.419 29.630 0.00 0.00 0.00 2.10
4201 4713 9.680315 TCTCTAAAATTATTCGCTAGCTTACTC 57.320 33.333 13.93 0.00 0.00 2.59
4202 4714 8.813643 TCTAAAATTATTCGCTAGCTTACTCC 57.186 34.615 13.93 0.00 0.00 3.85
4203 4715 8.639761 TCTAAAATTATTCGCTAGCTTACTCCT 58.360 33.333 13.93 0.00 0.00 3.69
4204 4716 9.909644 CTAAAATTATTCGCTAGCTTACTCCTA 57.090 33.333 13.93 0.00 0.00 2.94
4206 4718 8.590719 AAATTATTCGCTAGCTTACTCCTAAC 57.409 34.615 13.93 0.00 0.00 2.34
4207 4719 6.704289 TTATTCGCTAGCTTACTCCTAACA 57.296 37.500 13.93 0.00 0.00 2.41
4208 4720 5.593679 ATTCGCTAGCTTACTCCTAACAA 57.406 39.130 13.93 0.00 0.00 2.83
4209 4721 4.634184 TCGCTAGCTTACTCCTAACAAG 57.366 45.455 13.93 0.00 0.00 3.16
4210 4722 3.117046 CGCTAGCTTACTCCTAACAAGC 58.883 50.000 13.93 0.00 43.97 4.01
4213 4725 1.653151 GCTTACTCCTAACAAGCGGG 58.347 55.000 0.00 0.00 35.75 6.13
4214 4726 1.742750 GCTTACTCCTAACAAGCGGGG 60.743 57.143 0.00 0.00 35.75 5.73
4215 4727 1.553704 CTTACTCCTAACAAGCGGGGT 59.446 52.381 0.00 0.00 0.00 4.95
4216 4728 1.188863 TACTCCTAACAAGCGGGGTC 58.811 55.000 0.00 0.00 0.00 4.46
4217 4729 1.221021 CTCCTAACAAGCGGGGTCC 59.779 63.158 0.00 0.00 0.00 4.46
4218 4730 1.536907 TCCTAACAAGCGGGGTCCA 60.537 57.895 0.00 0.00 0.00 4.02
4219 4731 1.376812 CCTAACAAGCGGGGTCCAC 60.377 63.158 0.00 0.00 0.00 4.02
4220 4732 1.373435 CTAACAAGCGGGGTCCACA 59.627 57.895 0.00 0.00 0.00 4.17
4221 4733 0.953960 CTAACAAGCGGGGTCCACAC 60.954 60.000 0.00 0.00 0.00 3.82
4222 4734 1.412453 TAACAAGCGGGGTCCACACT 61.412 55.000 0.00 0.00 0.00 3.55
4223 4735 2.113139 CAAGCGGGGTCCACACTT 59.887 61.111 0.00 0.00 0.00 3.16
4224 4736 1.373435 CAAGCGGGGTCCACACTTA 59.627 57.895 0.00 0.00 0.00 2.24
4225 4737 0.035439 CAAGCGGGGTCCACACTTAT 60.035 55.000 0.00 0.00 0.00 1.73
4226 4738 0.252197 AAGCGGGGTCCACACTTATC 59.748 55.000 0.00 0.00 0.00 1.75
4227 4739 0.617820 AGCGGGGTCCACACTTATCT 60.618 55.000 0.00 0.00 0.00 1.98
4228 4740 0.252197 GCGGGGTCCACACTTATCTT 59.748 55.000 0.00 0.00 0.00 2.40
4229 4741 1.339727 GCGGGGTCCACACTTATCTTT 60.340 52.381 0.00 0.00 0.00 2.52
4230 4742 2.356135 CGGGGTCCACACTTATCTTTG 58.644 52.381 0.00 0.00 0.00 2.77
4231 4743 2.290071 CGGGGTCCACACTTATCTTTGT 60.290 50.000 0.00 0.00 0.00 2.83
4232 4744 3.081804 GGGGTCCACACTTATCTTTGTG 58.918 50.000 0.00 0.00 42.40 3.33
4233 4745 3.244770 GGGGTCCACACTTATCTTTGTGA 60.245 47.826 3.30 0.00 45.03 3.58
4234 4746 4.394729 GGGTCCACACTTATCTTTGTGAA 58.605 43.478 3.30 0.00 45.03 3.18
4235 4747 4.825085 GGGTCCACACTTATCTTTGTGAAA 59.175 41.667 3.30 0.00 45.03 2.69
4236 4748 5.476945 GGGTCCACACTTATCTTTGTGAAAT 59.523 40.000 3.30 0.00 45.03 2.17
4237 4749 6.657541 GGGTCCACACTTATCTTTGTGAAATA 59.342 38.462 3.30 0.00 45.03 1.40
4238 4750 7.148239 GGGTCCACACTTATCTTTGTGAAATAG 60.148 40.741 3.30 0.00 45.03 1.73
4239 4751 7.606456 GGTCCACACTTATCTTTGTGAAATAGA 59.394 37.037 3.30 0.00 45.03 1.98
4240 4752 8.999431 GTCCACACTTATCTTTGTGAAATAGAA 58.001 33.333 3.30 0.00 45.03 2.10
4241 4753 9.567776 TCCACACTTATCTTTGTGAAATAGAAA 57.432 29.630 3.30 0.00 45.03 2.52
4242 4754 9.831737 CCACACTTATCTTTGTGAAATAGAAAG 57.168 33.333 3.30 0.00 45.03 2.62
4249 4761 7.426929 TCTTTGTGAAATAGAAAGAGCTGAC 57.573 36.000 0.00 0.00 41.97 3.51
4250 4762 6.992123 TCTTTGTGAAATAGAAAGAGCTGACA 59.008 34.615 0.00 0.00 41.97 3.58
4251 4763 7.663081 TCTTTGTGAAATAGAAAGAGCTGACAT 59.337 33.333 0.00 0.00 41.97 3.06
4252 4764 6.732531 TGTGAAATAGAAAGAGCTGACATG 57.267 37.500 0.00 0.00 0.00 3.21
4253 4765 6.233434 TGTGAAATAGAAAGAGCTGACATGT 58.767 36.000 0.00 0.00 0.00 3.21
4254 4766 6.148315 TGTGAAATAGAAAGAGCTGACATGTG 59.852 38.462 1.15 0.00 0.00 3.21
4255 4767 5.645067 TGAAATAGAAAGAGCTGACATGTGG 59.355 40.000 1.15 0.00 0.00 4.17
4256 4768 2.486472 AGAAAGAGCTGACATGTGGG 57.514 50.000 1.15 0.00 0.00 4.61
4257 4769 1.701847 AGAAAGAGCTGACATGTGGGT 59.298 47.619 1.15 0.76 0.00 4.51
4258 4770 2.906389 AGAAAGAGCTGACATGTGGGTA 59.094 45.455 1.15 0.00 0.00 3.69
4259 4771 3.521126 AGAAAGAGCTGACATGTGGGTAT 59.479 43.478 1.15 0.00 0.00 2.73
4260 4772 4.716784 AGAAAGAGCTGACATGTGGGTATA 59.283 41.667 1.15 0.00 0.00 1.47
4261 4773 4.679373 AAGAGCTGACATGTGGGTATAG 57.321 45.455 1.15 0.00 0.00 1.31
4262 4774 2.968574 AGAGCTGACATGTGGGTATAGG 59.031 50.000 1.15 0.00 0.00 2.57
4263 4775 2.037772 GAGCTGACATGTGGGTATAGGG 59.962 54.545 1.15 0.00 0.00 3.53
4264 4776 1.072331 GCTGACATGTGGGTATAGGGG 59.928 57.143 1.15 0.00 0.00 4.79
4265 4777 2.408565 CTGACATGTGGGTATAGGGGT 58.591 52.381 1.15 0.00 0.00 4.95
4266 4778 3.583228 CTGACATGTGGGTATAGGGGTA 58.417 50.000 1.15 0.00 0.00 3.69
4267 4779 4.168101 CTGACATGTGGGTATAGGGGTAT 58.832 47.826 1.15 0.00 0.00 2.73
4268 4780 4.572978 TGACATGTGGGTATAGGGGTATT 58.427 43.478 1.15 0.00 0.00 1.89
4269 4781 4.979039 TGACATGTGGGTATAGGGGTATTT 59.021 41.667 1.15 0.00 0.00 1.40
4270 4782 5.433712 TGACATGTGGGTATAGGGGTATTTT 59.566 40.000 1.15 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.703093 ACGTCAGAACTTTTCTCCCAAAAA 59.297 37.500 0.00 0.00 38.11 1.94
24 25 4.266714 ACGTCAGAACTTTTCTCCCAAAA 58.733 39.130 0.00 0.00 38.11 2.44
25 26 3.881220 ACGTCAGAACTTTTCTCCCAAA 58.119 40.909 0.00 0.00 38.11 3.28
26 27 3.553828 ACGTCAGAACTTTTCTCCCAA 57.446 42.857 0.00 0.00 38.11 4.12
27 28 3.553828 AACGTCAGAACTTTTCTCCCA 57.446 42.857 0.00 0.00 38.11 4.37
28 29 4.629092 ACTAACGTCAGAACTTTTCTCCC 58.371 43.478 0.00 0.00 38.11 4.30
29 30 7.144000 TCTAACTAACGTCAGAACTTTTCTCC 58.856 38.462 0.00 0.00 38.11 3.71
30 31 8.571461 TTCTAACTAACGTCAGAACTTTTCTC 57.429 34.615 0.00 0.00 38.11 2.87
31 32 8.815189 GTTTCTAACTAACGTCAGAACTTTTCT 58.185 33.333 0.00 0.00 41.70 2.52
32 33 8.598075 TGTTTCTAACTAACGTCAGAACTTTTC 58.402 33.333 0.00 0.00 0.00 2.29
33 34 8.483307 TGTTTCTAACTAACGTCAGAACTTTT 57.517 30.769 0.00 0.00 0.00 2.27
34 35 8.483307 TTGTTTCTAACTAACGTCAGAACTTT 57.517 30.769 0.00 0.00 0.00 2.66
35 36 7.977853 TCTTGTTTCTAACTAACGTCAGAACTT 59.022 33.333 0.00 0.00 0.00 2.66
36 37 7.486647 TCTTGTTTCTAACTAACGTCAGAACT 58.513 34.615 0.00 0.00 0.00 3.01
37 38 7.689953 TCTTGTTTCTAACTAACGTCAGAAC 57.310 36.000 0.00 0.00 0.00 3.01
38 39 8.706492 TTTCTTGTTTCTAACTAACGTCAGAA 57.294 30.769 0.00 0.00 0.00 3.02
39 40 8.882415 ATTTCTTGTTTCTAACTAACGTCAGA 57.118 30.769 0.00 0.00 0.00 3.27
40 41 8.979574 AGATTTCTTGTTTCTAACTAACGTCAG 58.020 33.333 0.00 0.00 0.00 3.51
41 42 8.882415 AGATTTCTTGTTTCTAACTAACGTCA 57.118 30.769 0.00 0.00 0.00 4.35
42 43 9.582223 CAAGATTTCTTGTTTCTAACTAACGTC 57.418 33.333 11.37 0.00 46.11 4.34
58 59 9.700831 ATAAGCCTAACATTACCAAGATTTCTT 57.299 29.630 0.00 0.00 36.45 2.52
59 60 9.343539 GATAAGCCTAACATTACCAAGATTTCT 57.656 33.333 0.00 0.00 0.00 2.52
60 61 8.283291 CGATAAGCCTAACATTACCAAGATTTC 58.717 37.037 0.00 0.00 0.00 2.17
61 62 7.255139 GCGATAAGCCTAACATTACCAAGATTT 60.255 37.037 0.00 0.00 40.81 2.17
62 63 6.204882 GCGATAAGCCTAACATTACCAAGATT 59.795 38.462 0.00 0.00 40.81 2.40
63 64 5.701290 GCGATAAGCCTAACATTACCAAGAT 59.299 40.000 0.00 0.00 40.81 2.40
64 65 5.054477 GCGATAAGCCTAACATTACCAAGA 58.946 41.667 0.00 0.00 40.81 3.02
65 66 5.344207 GCGATAAGCCTAACATTACCAAG 57.656 43.478 0.00 0.00 40.81 3.61
80 81 1.595382 CCGGAGGCCAAGCGATAAG 60.595 63.158 5.01 0.00 46.14 1.73
81 82 2.504032 CCGGAGGCCAAGCGATAA 59.496 61.111 5.01 0.00 46.14 1.75
98 99 2.663188 GGATCGATGGCTGGACGC 60.663 66.667 0.54 0.00 38.13 5.19
99 100 2.355126 CGGATCGATGGCTGGACG 60.355 66.667 0.54 0.00 0.00 4.79
100 101 2.663188 GCGGATCGATGGCTGGAC 60.663 66.667 0.54 0.00 0.00 4.02
101 102 2.510551 ATGCGGATCGATGGCTGGA 61.511 57.895 0.54 0.00 0.00 3.86
102 103 2.031616 ATGCGGATCGATGGCTGG 59.968 61.111 0.54 0.00 0.00 4.85
103 104 2.962827 GCATGCGGATCGATGGCTG 61.963 63.158 0.54 7.70 0.00 4.85
104 105 2.667536 GCATGCGGATCGATGGCT 60.668 61.111 0.54 0.00 0.00 4.75
105 106 4.081030 CGCATGCGGATCGATGGC 62.081 66.667 31.99 6.89 35.56 4.40
106 107 4.081030 GCGCATGCGGATCGATGG 62.081 66.667 38.22 10.57 40.19 3.51
117 118 2.114670 AATGGAACGGGAGCGCATG 61.115 57.895 11.47 0.00 0.00 4.06
118 119 2.114670 CAATGGAACGGGAGCGCAT 61.115 57.895 11.47 0.00 0.00 4.73
119 120 2.745884 CAATGGAACGGGAGCGCA 60.746 61.111 11.47 0.00 0.00 6.09
120 121 2.435938 TCAATGGAACGGGAGCGC 60.436 61.111 0.00 0.00 0.00 5.92
121 122 0.744414 ATGTCAATGGAACGGGAGCG 60.744 55.000 0.00 0.00 0.00 5.03
122 123 1.463674 AATGTCAATGGAACGGGAGC 58.536 50.000 0.00 0.00 0.00 4.70
123 124 4.485163 GAAAAATGTCAATGGAACGGGAG 58.515 43.478 0.00 0.00 0.00 4.30
124 125 3.257127 GGAAAAATGTCAATGGAACGGGA 59.743 43.478 0.00 0.00 0.00 5.14
125 126 3.258123 AGGAAAAATGTCAATGGAACGGG 59.742 43.478 0.00 0.00 0.00 5.28
126 127 4.519540 AGGAAAAATGTCAATGGAACGG 57.480 40.909 0.00 0.00 0.00 4.44
127 128 6.292811 CCAAAAGGAAAAATGTCAATGGAACG 60.293 38.462 0.00 0.00 0.00 3.95
128 129 6.017192 CCCAAAAGGAAAAATGTCAATGGAAC 60.017 38.462 0.00 0.00 38.24 3.62
129 130 6.060788 CCCAAAAGGAAAAATGTCAATGGAA 58.939 36.000 0.00 0.00 38.24 3.53
130 131 5.619220 CCCAAAAGGAAAAATGTCAATGGA 58.381 37.500 0.00 0.00 38.24 3.41
131 132 4.216042 GCCCAAAAGGAAAAATGTCAATGG 59.784 41.667 0.00 0.00 38.24 3.16
132 133 5.065235 AGCCCAAAAGGAAAAATGTCAATG 58.935 37.500 0.00 0.00 38.24 2.82
133 134 5.308976 AGCCCAAAAGGAAAAATGTCAAT 57.691 34.783 0.00 0.00 38.24 2.57
134 135 4.769345 AGCCCAAAAGGAAAAATGTCAA 57.231 36.364 0.00 0.00 38.24 3.18
135 136 5.454045 GGTTAGCCCAAAAGGAAAAATGTCA 60.454 40.000 0.00 0.00 38.24 3.58
136 137 4.994852 GGTTAGCCCAAAAGGAAAAATGTC 59.005 41.667 0.00 0.00 38.24 3.06
137 138 4.658435 AGGTTAGCCCAAAAGGAAAAATGT 59.342 37.500 0.00 0.00 38.24 2.71
138 139 5.227569 AGGTTAGCCCAAAAGGAAAAATG 57.772 39.130 0.00 0.00 38.24 2.32
139 140 5.904984 AAGGTTAGCCCAAAAGGAAAAAT 57.095 34.783 0.00 0.00 38.24 1.82
140 141 5.702065 AAAGGTTAGCCCAAAAGGAAAAA 57.298 34.783 0.00 0.00 38.24 1.94
141 142 5.045505 ACAAAAGGTTAGCCCAAAAGGAAAA 60.046 36.000 0.00 0.00 38.24 2.29
142 143 4.471747 ACAAAAGGTTAGCCCAAAAGGAAA 59.528 37.500 0.00 0.00 38.24 3.13
143 144 4.034410 ACAAAAGGTTAGCCCAAAAGGAA 58.966 39.130 0.00 0.00 38.24 3.36
144 145 3.639561 GACAAAAGGTTAGCCCAAAAGGA 59.360 43.478 0.00 0.00 38.24 3.36
145 146 3.552068 CGACAAAAGGTTAGCCCAAAAGG 60.552 47.826 0.00 0.00 39.47 3.11
146 147 3.638484 CGACAAAAGGTTAGCCCAAAAG 58.362 45.455 0.00 0.00 34.66 2.27
147 148 2.223852 GCGACAAAAGGTTAGCCCAAAA 60.224 45.455 0.00 0.00 34.66 2.44
148 149 1.338655 GCGACAAAAGGTTAGCCCAAA 59.661 47.619 0.00 0.00 34.66 3.28
149 150 0.955905 GCGACAAAAGGTTAGCCCAA 59.044 50.000 0.00 0.00 34.66 4.12
150 151 0.891904 GGCGACAAAAGGTTAGCCCA 60.892 55.000 0.00 0.00 43.51 5.36
151 152 0.891904 TGGCGACAAAAGGTTAGCCC 60.892 55.000 0.00 0.00 46.57 5.19
152 153 0.521735 CTGGCGACAAAAGGTTAGCC 59.478 55.000 0.00 7.61 46.99 3.93
153 154 0.109735 GCTGGCGACAAAAGGTTAGC 60.110 55.000 0.00 0.00 42.06 3.09
154 155 1.523758 AGCTGGCGACAAAAGGTTAG 58.476 50.000 0.00 0.00 42.06 2.34
155 156 2.695359 CTAGCTGGCGACAAAAGGTTA 58.305 47.619 0.00 0.00 42.06 2.85
156 157 1.523758 CTAGCTGGCGACAAAAGGTT 58.476 50.000 0.00 0.00 42.06 3.50
157 158 0.955919 GCTAGCTGGCGACAAAAGGT 60.956 55.000 6.22 0.00 42.06 3.50
158 159 1.648467 GGCTAGCTGGCGACAAAAGG 61.648 60.000 16.50 0.00 42.06 3.11
159 160 0.674895 AGGCTAGCTGGCGACAAAAG 60.675 55.000 16.50 0.00 46.88 2.27
160 161 0.611200 TAGGCTAGCTGGCGACAAAA 59.389 50.000 16.50 0.00 46.88 2.44
161 162 0.611200 TTAGGCTAGCTGGCGACAAA 59.389 50.000 16.50 4.58 46.88 2.83
162 163 0.108329 GTTAGGCTAGCTGGCGACAA 60.108 55.000 16.50 6.74 46.88 3.18
163 164 1.515954 GTTAGGCTAGCTGGCGACA 59.484 57.895 16.50 0.00 46.88 4.35
164 165 1.227292 GGTTAGGCTAGCTGGCGAC 60.227 63.158 16.50 13.64 46.88 5.19
165 166 2.432300 GGGTTAGGCTAGCTGGCGA 61.432 63.158 16.50 3.39 46.88 5.54
166 167 2.109181 GGGTTAGGCTAGCTGGCG 59.891 66.667 16.50 0.00 46.88 5.69
167 168 2.511403 GGGGTTAGGCTAGCTGGC 59.489 66.667 14.65 14.65 42.15 4.85
168 169 1.623542 AACGGGGTTAGGCTAGCTGG 61.624 60.000 15.72 0.00 0.00 4.85
169 170 0.179081 GAACGGGGTTAGGCTAGCTG 60.179 60.000 15.72 1.98 0.00 4.24
170 171 1.673808 CGAACGGGGTTAGGCTAGCT 61.674 60.000 15.72 3.22 0.00 3.32
171 172 1.227176 CGAACGGGGTTAGGCTAGC 60.227 63.158 6.04 6.04 0.00 3.42
172 173 1.227176 GCGAACGGGGTTAGGCTAG 60.227 63.158 0.00 0.00 0.00 3.42
173 174 2.894919 GCGAACGGGGTTAGGCTA 59.105 61.111 0.00 0.00 0.00 3.93
174 175 4.446413 CGCGAACGGGGTTAGGCT 62.446 66.667 0.00 0.00 34.97 4.58
176 177 4.446413 AGCGCGAACGGGGTTAGG 62.446 66.667 12.10 0.00 40.57 2.69
177 178 2.884207 GAGCGCGAACGGGGTTAG 60.884 66.667 12.10 0.00 40.57 2.34
178 179 3.223710 TTGAGCGCGAACGGGGTTA 62.224 57.895 12.10 10.07 40.57 2.85
179 180 4.612412 TTGAGCGCGAACGGGGTT 62.612 61.111 12.10 0.00 40.57 4.11
184 185 4.430423 GTGGCTTGAGCGCGAACG 62.430 66.667 12.10 0.00 43.26 3.95
185 186 3.345808 TGTGGCTTGAGCGCGAAC 61.346 61.111 12.10 2.54 43.26 3.95
186 187 3.345808 GTGTGGCTTGAGCGCGAA 61.346 61.111 12.10 0.00 43.26 4.70
189 190 3.579626 GAACGTGTGGCTTGAGCGC 62.580 63.158 0.00 0.00 43.26 5.92
190 191 1.498865 AAGAACGTGTGGCTTGAGCG 61.499 55.000 0.00 0.00 43.26 5.03
191 192 0.040958 CAAGAACGTGTGGCTTGAGC 60.041 55.000 12.59 0.00 41.03 4.26
192 193 1.003545 CACAAGAACGTGTGGCTTGAG 60.004 52.381 20.44 12.70 44.29 3.02
193 194 1.013596 CACAAGAACGTGTGGCTTGA 58.986 50.000 20.44 0.00 44.29 3.02
194 195 3.532138 CACAAGAACGTGTGGCTTG 57.468 52.632 15.02 15.02 44.29 4.01
211 212 1.719725 TTTTCGCGTGGCTTCTTGCA 61.720 50.000 5.77 0.00 45.15 4.08
235 242 2.974489 CTGCGCACAAGCTTCCCTG 61.974 63.158 5.66 0.00 39.10 4.45
249 256 4.807834 TGAGATTGAATTTCTCTAGCTGCG 59.192 41.667 0.00 0.00 40.26 5.18
277 284 5.593679 AGTAGTACGTCCAATGCTGTTAT 57.406 39.130 0.00 0.00 0.00 1.89
280 287 3.380637 CCTAGTAGTACGTCCAATGCTGT 59.619 47.826 0.00 0.00 0.00 4.40
281 288 3.795826 GCCTAGTAGTACGTCCAATGCTG 60.796 52.174 0.00 0.00 0.00 4.41
282 289 2.361438 GCCTAGTAGTACGTCCAATGCT 59.639 50.000 0.00 0.00 0.00 3.79
284 291 3.303857 CGAGCCTAGTAGTACGTCCAATG 60.304 52.174 0.00 0.00 0.00 2.82
287 294 1.208052 ACGAGCCTAGTAGTACGTCCA 59.792 52.381 0.00 0.00 0.00 4.02
288 295 1.596727 CACGAGCCTAGTAGTACGTCC 59.403 57.143 0.00 0.00 31.82 4.79
289 296 1.596727 CCACGAGCCTAGTAGTACGTC 59.403 57.143 0.00 0.00 31.82 4.34
292 299 2.049888 ACCCACGAGCCTAGTAGTAC 57.950 55.000 0.00 0.00 0.00 2.73
299 314 2.978824 GCTGAACCCACGAGCCTA 59.021 61.111 0.00 0.00 0.00 3.93
300 315 4.379243 CGCTGAACCCACGAGCCT 62.379 66.667 0.00 0.00 0.00 4.58
311 326 1.961793 ACAGTAAAAGTGCCGCTGAA 58.038 45.000 0.00 0.00 0.00 3.02
320 335 9.634163 AAAAATCAAACTCGAAACAGTAAAAGT 57.366 25.926 0.00 0.00 0.00 2.66
382 400 3.746045 TCATGGTATTTACTCCCGCTC 57.254 47.619 0.00 0.00 0.00 5.03
386 404 5.183904 GGATGCATTCATGGTATTTACTCCC 59.816 44.000 0.00 0.00 31.96 4.30
447 469 5.041287 GGAGTAACTTTGTTGCCAAAACTC 58.959 41.667 8.87 8.87 41.22 3.01
453 475 2.441750 AGGAGGAGTAACTTTGTTGCCA 59.558 45.455 0.00 0.00 0.00 4.92
528 560 4.124943 ATGGAGCCTGCCTGCCTG 62.125 66.667 0.00 0.00 0.00 4.85
529 561 3.806667 GATGGAGCCTGCCTGCCT 61.807 66.667 0.00 0.00 0.00 4.75
530 562 4.119363 TGATGGAGCCTGCCTGCC 62.119 66.667 0.00 0.00 0.00 4.85
531 563 2.827642 GTGATGGAGCCTGCCTGC 60.828 66.667 0.00 0.00 0.00 4.85
539 571 0.310543 TTTTGCGTGTGTGATGGAGC 59.689 50.000 0.00 0.00 0.00 4.70
548 583 3.379240 TGGTTCATTCATTTTGCGTGTG 58.621 40.909 0.00 0.00 0.00 3.82
579 621 1.080839 CATGGGTTTTGTTCGGCCG 60.081 57.895 22.12 22.12 0.00 6.13
584 626 2.296190 GGTGAGGTCATGGGTTTTGTTC 59.704 50.000 0.00 0.00 0.00 3.18
684 746 3.121113 GCGACCGTTGATTTTGAATTTGG 59.879 43.478 0.00 0.00 0.00 3.28
685 747 3.121113 GGCGACCGTTGATTTTGAATTTG 59.879 43.478 0.00 0.00 0.00 2.32
686 748 3.313690 GGCGACCGTTGATTTTGAATTT 58.686 40.909 0.00 0.00 0.00 1.82
687 749 2.352323 GGGCGACCGTTGATTTTGAATT 60.352 45.455 0.00 0.00 43.64 2.17
708 770 3.518068 GAATTTCCGCCGGGGCAG 61.518 66.667 14.15 0.00 42.06 4.85
709 771 3.870024 TTGAATTTCCGCCGGGGCA 62.870 57.895 14.15 0.00 42.06 5.36
710 772 2.161078 TTTTGAATTTCCGCCGGGGC 62.161 55.000 14.15 0.00 34.94 5.80
711 773 0.389296 GTTTTGAATTTCCGCCGGGG 60.389 55.000 12.43 12.43 37.02 5.73
712 774 0.389296 GGTTTTGAATTTCCGCCGGG 60.389 55.000 1.90 0.00 0.00 5.73
713 775 0.315568 TGGTTTTGAATTTCCGCCGG 59.684 50.000 0.00 0.00 0.00 6.13
740 802 4.357279 AGGGCACAAGGAGCAGCC 62.357 66.667 0.00 0.00 46.28 4.85
741 803 2.749441 GAGGGCACAAGGAGCAGC 60.749 66.667 0.00 0.00 0.00 5.25
742 804 2.045536 GGAGGGCACAAGGAGCAG 60.046 66.667 0.00 0.00 0.00 4.24
743 805 2.853542 TGGAGGGCACAAGGAGCA 60.854 61.111 0.00 0.00 0.00 4.26
744 806 2.045536 CTGGAGGGCACAAGGAGC 60.046 66.667 0.00 0.00 0.00 4.70
813 881 4.043100 GTAGGGTGGGTGTGGGGC 62.043 72.222 0.00 0.00 0.00 5.80
814 882 0.622154 TATGTAGGGTGGGTGTGGGG 60.622 60.000 0.00 0.00 0.00 4.96
816 884 2.619590 GGTTTATGTAGGGTGGGTGTGG 60.620 54.545 0.00 0.00 0.00 4.17
818 886 1.637035 GGGTTTATGTAGGGTGGGTGT 59.363 52.381 0.00 0.00 0.00 4.16
823 901 0.464916 GCCGGGGTTTATGTAGGGTG 60.465 60.000 2.18 0.00 0.00 4.61
1021 1104 3.827898 CACGAGGAGGAGGACGGC 61.828 72.222 0.00 0.00 0.00 5.68
2022 2467 3.891586 GAGCTTCACCGTCGTGCGA 62.892 63.158 0.00 0.00 44.77 5.10
2028 2473 2.357034 TTGCCGAGCTTCACCGTC 60.357 61.111 0.00 0.00 0.00 4.79
2358 2807 2.093447 CCTGAAGTAGGCGGTGATCTTT 60.093 50.000 0.00 0.00 40.38 2.52
3057 3509 2.033448 TTCGGCATGTCCACCACC 59.967 61.111 6.92 0.00 34.01 4.61
3072 3524 1.080705 CGTGACCGACACCTCCTTC 60.081 63.158 7.02 0.00 45.73 3.46
3286 3745 3.479269 CAACGCCGAGAGCCGAAC 61.479 66.667 0.00 0.00 41.76 3.95
3308 3767 3.108289 CTCTGTCACGCACGCCTG 61.108 66.667 0.00 0.00 0.00 4.85
3569 4068 5.185454 TGCTCTGTTTTTGTCTGAAGAAGA 58.815 37.500 0.00 0.00 0.00 2.87
3664 4167 6.749923 AGTAAGAAATGAAATGTGCTCCTC 57.250 37.500 0.00 0.00 0.00 3.71
3722 4225 2.266554 CGAGCACTCTGTTCATTCCTC 58.733 52.381 0.00 0.00 0.00 3.71
3735 4240 3.181475 TGTCTGAAGAAGAAACGAGCACT 60.181 43.478 0.00 0.00 36.40 4.40
3746 4251 7.358830 GGATTCTCTGTTTTTGTCTGAAGAAG 58.641 38.462 0.00 0.00 0.00 2.85
3752 4257 4.752101 AGTCGGATTCTCTGTTTTTGTCTG 59.248 41.667 0.00 0.00 0.00 3.51
3767 4273 2.432300 CCCTACGGGCAGTCGGATT 61.432 63.158 9.87 0.00 37.87 3.01
3811 4317 4.715534 TTGAAGGTTGTGGTCCTCAATA 57.284 40.909 9.50 0.00 33.76 1.90
3817 4323 2.558359 CCATCTTTGAAGGTTGTGGTCC 59.442 50.000 0.00 0.00 0.00 4.46
3892 4404 1.627329 AGCCACTGTGTGTCATCTCAT 59.373 47.619 7.08 0.00 0.00 2.90
3893 4405 1.051008 AGCCACTGTGTGTCATCTCA 58.949 50.000 7.08 0.00 0.00 3.27
3894 4406 2.175878 AAGCCACTGTGTGTCATCTC 57.824 50.000 7.08 0.00 0.00 2.75
3895 4407 2.224606 CAAAGCCACTGTGTGTCATCT 58.775 47.619 7.08 0.00 0.00 2.90
3926 4438 9.877178 ATAACCAATGGCATAAACGATTAAAAA 57.123 25.926 0.00 0.00 0.00 1.94
3931 4443 6.463995 ACATAACCAATGGCATAAACGATT 57.536 33.333 0.00 0.00 40.16 3.34
3933 4445 5.493133 GACATAACCAATGGCATAAACGA 57.507 39.130 0.00 0.00 43.87 3.85
3941 4453 5.822519 TGAATAGTGAGACATAACCAATGGC 59.177 40.000 0.00 0.00 44.90 4.40
3942 4454 6.017605 GCTGAATAGTGAGACATAACCAATGG 60.018 42.308 0.00 0.00 40.16 3.16
3943 4455 6.765036 AGCTGAATAGTGAGACATAACCAATG 59.235 38.462 0.00 0.00 41.74 2.82
3944 4456 6.893583 AGCTGAATAGTGAGACATAACCAAT 58.106 36.000 0.00 0.00 0.00 3.16
3945 4457 6.299805 AGCTGAATAGTGAGACATAACCAA 57.700 37.500 0.00 0.00 0.00 3.67
3946 4458 5.939764 AGCTGAATAGTGAGACATAACCA 57.060 39.130 0.00 0.00 0.00 3.67
3947 4459 6.457528 GCAAAGCTGAATAGTGAGACATAACC 60.458 42.308 0.00 0.00 0.00 2.85
3948 4460 6.457528 GGCAAAGCTGAATAGTGAGACATAAC 60.458 42.308 0.00 0.00 0.00 1.89
3949 4461 5.586243 GGCAAAGCTGAATAGTGAGACATAA 59.414 40.000 0.00 0.00 0.00 1.90
3950 4462 5.118990 GGCAAAGCTGAATAGTGAGACATA 58.881 41.667 0.00 0.00 0.00 2.29
3951 4463 3.944015 GGCAAAGCTGAATAGTGAGACAT 59.056 43.478 0.00 0.00 0.00 3.06
3952 4464 3.244526 TGGCAAAGCTGAATAGTGAGACA 60.245 43.478 0.00 0.00 0.00 3.41
3953 4465 3.126000 GTGGCAAAGCTGAATAGTGAGAC 59.874 47.826 0.00 0.00 0.00 3.36
3954 4466 3.008375 AGTGGCAAAGCTGAATAGTGAGA 59.992 43.478 0.00 0.00 0.00 3.27
3955 4467 3.341823 AGTGGCAAAGCTGAATAGTGAG 58.658 45.455 0.00 0.00 0.00 3.51
3956 4468 3.423539 AGTGGCAAAGCTGAATAGTGA 57.576 42.857 0.00 0.00 0.00 3.41
3957 4469 4.507710 TCTAGTGGCAAAGCTGAATAGTG 58.492 43.478 0.00 0.00 0.00 2.74
3958 4470 4.826274 TCTAGTGGCAAAGCTGAATAGT 57.174 40.909 0.00 0.00 0.00 2.12
3959 4471 6.500684 TTTTCTAGTGGCAAAGCTGAATAG 57.499 37.500 0.00 0.00 0.00 1.73
3960 4472 7.466746 AATTTTCTAGTGGCAAAGCTGAATA 57.533 32.000 0.00 0.00 0.00 1.75
3961 4473 5.990120 ATTTTCTAGTGGCAAAGCTGAAT 57.010 34.783 0.00 0.00 0.00 2.57
3962 4474 5.789643 AATTTTCTAGTGGCAAAGCTGAA 57.210 34.783 0.00 0.00 0.00 3.02
3963 4475 5.789643 AAATTTTCTAGTGGCAAAGCTGA 57.210 34.783 0.00 0.00 0.00 4.26
3964 4476 6.681777 ACTAAATTTTCTAGTGGCAAAGCTG 58.318 36.000 0.00 0.00 0.00 4.24
3965 4477 6.901081 ACTAAATTTTCTAGTGGCAAAGCT 57.099 33.333 0.00 0.00 0.00 3.74
3966 4478 6.128822 GCAACTAAATTTTCTAGTGGCAAAGC 60.129 38.462 12.26 0.00 43.24 3.51
3967 4479 7.338440 GCAACTAAATTTTCTAGTGGCAAAG 57.662 36.000 12.26 0.00 43.24 2.77
3971 4483 8.980143 TTTATGCAACTAAATTTTCTAGTGGC 57.020 30.769 10.77 10.77 43.79 5.01
3977 4489 9.282569 TGCCATTTTTATGCAACTAAATTTTCT 57.717 25.926 0.00 0.00 30.85 2.52
3980 4492 9.843334 CAATGCCATTTTTATGCAACTAAATTT 57.157 25.926 0.00 0.00 38.69 1.82
3981 4493 7.969508 GCAATGCCATTTTTATGCAACTAAATT 59.030 29.630 0.00 0.00 38.69 1.82
3982 4494 7.337436 AGCAATGCCATTTTTATGCAACTAAAT 59.663 29.630 0.00 0.00 38.69 1.40
3983 4495 6.654161 AGCAATGCCATTTTTATGCAACTAAA 59.346 30.769 0.00 0.00 38.69 1.85
3984 4496 6.171921 AGCAATGCCATTTTTATGCAACTAA 58.828 32.000 0.00 0.00 38.69 2.24
3985 4497 5.732633 AGCAATGCCATTTTTATGCAACTA 58.267 33.333 0.00 0.00 38.69 2.24
3986 4498 4.581868 AGCAATGCCATTTTTATGCAACT 58.418 34.783 0.00 0.00 38.69 3.16
3987 4499 4.950434 AGCAATGCCATTTTTATGCAAC 57.050 36.364 0.00 0.00 38.69 4.17
3988 4500 4.093115 CGAAGCAATGCCATTTTTATGCAA 59.907 37.500 0.00 0.00 38.69 4.08
3989 4501 3.617706 CGAAGCAATGCCATTTTTATGCA 59.382 39.130 0.00 0.00 39.68 3.96
3990 4502 3.618150 ACGAAGCAATGCCATTTTTATGC 59.382 39.130 0.00 0.00 0.00 3.14
3991 4503 5.783100 AACGAAGCAATGCCATTTTTATG 57.217 34.783 0.00 0.00 0.00 1.90
3992 4504 6.042143 CCTAACGAAGCAATGCCATTTTTAT 58.958 36.000 0.00 0.00 0.00 1.40
3993 4505 5.406649 CCTAACGAAGCAATGCCATTTTTA 58.593 37.500 0.00 0.00 0.00 1.52
3994 4506 4.244862 CCTAACGAAGCAATGCCATTTTT 58.755 39.130 0.00 0.00 0.00 1.94
3995 4507 3.848726 CCTAACGAAGCAATGCCATTTT 58.151 40.909 0.00 0.00 0.00 1.82
3996 4508 2.417243 GCCTAACGAAGCAATGCCATTT 60.417 45.455 0.00 0.00 0.00 2.32
3997 4509 1.134946 GCCTAACGAAGCAATGCCATT 59.865 47.619 0.00 0.00 0.00 3.16
3998 4510 0.740737 GCCTAACGAAGCAATGCCAT 59.259 50.000 0.00 0.00 0.00 4.40
3999 4511 2.179764 GCCTAACGAAGCAATGCCA 58.820 52.632 0.00 0.00 0.00 4.92
4010 4522 2.892373 TTTTGAGCAATCGCCTAACG 57.108 45.000 0.00 0.00 45.62 3.18
4011 4523 2.854185 GCATTTTGAGCAATCGCCTAAC 59.146 45.455 0.00 0.00 39.83 2.34
4012 4524 2.159254 GGCATTTTGAGCAATCGCCTAA 60.159 45.455 9.49 0.00 39.83 2.69
4013 4525 1.405105 GGCATTTTGAGCAATCGCCTA 59.595 47.619 9.49 0.00 39.83 3.93
4014 4526 0.174162 GGCATTTTGAGCAATCGCCT 59.826 50.000 9.49 0.00 39.83 5.52
4015 4527 0.108709 TGGCATTTTGAGCAATCGCC 60.109 50.000 9.72 9.72 39.83 5.54
4016 4528 0.994263 GTGGCATTTTGAGCAATCGC 59.006 50.000 0.00 0.00 38.99 4.58
4017 4529 2.256174 CAGTGGCATTTTGAGCAATCG 58.744 47.619 0.00 0.00 0.00 3.34
4018 4530 2.991190 CACAGTGGCATTTTGAGCAATC 59.009 45.455 0.00 0.00 0.00 2.67
4019 4531 2.629137 TCACAGTGGCATTTTGAGCAAT 59.371 40.909 0.00 0.00 0.00 3.56
4020 4532 2.030371 TCACAGTGGCATTTTGAGCAA 58.970 42.857 0.00 0.00 0.00 3.91
4021 4533 1.689984 TCACAGTGGCATTTTGAGCA 58.310 45.000 0.00 0.00 0.00 4.26
4022 4534 2.397549 GTTCACAGTGGCATTTTGAGC 58.602 47.619 0.00 0.00 0.00 4.26
4023 4535 2.361757 TGGTTCACAGTGGCATTTTGAG 59.638 45.455 0.00 0.00 0.00 3.02
4024 4536 2.382882 TGGTTCACAGTGGCATTTTGA 58.617 42.857 0.00 0.00 0.00 2.69
4025 4537 2.886862 TGGTTCACAGTGGCATTTTG 57.113 45.000 0.00 0.00 0.00 2.44
4026 4538 4.588528 AGTAATGGTTCACAGTGGCATTTT 59.411 37.500 0.00 0.00 0.00 1.82
4027 4539 4.022068 CAGTAATGGTTCACAGTGGCATTT 60.022 41.667 0.00 0.00 0.00 2.32
4028 4540 3.507233 CAGTAATGGTTCACAGTGGCATT 59.493 43.478 0.00 0.00 0.00 3.56
4029 4541 3.084039 CAGTAATGGTTCACAGTGGCAT 58.916 45.455 0.00 0.00 0.00 4.40
4030 4542 2.158682 ACAGTAATGGTTCACAGTGGCA 60.159 45.455 0.00 0.00 0.00 4.92
4031 4543 2.484264 GACAGTAATGGTTCACAGTGGC 59.516 50.000 0.00 0.00 0.00 5.01
4032 4544 3.738982 TGACAGTAATGGTTCACAGTGG 58.261 45.455 0.00 0.00 0.00 4.00
4033 4545 5.947228 ATTGACAGTAATGGTTCACAGTG 57.053 39.130 0.00 0.00 0.00 3.66
4034 4546 6.061441 TGAATTGACAGTAATGGTTCACAGT 58.939 36.000 0.00 0.00 0.00 3.55
4035 4547 6.558771 TGAATTGACAGTAATGGTTCACAG 57.441 37.500 0.00 0.00 0.00 3.66
4036 4548 6.951062 TTGAATTGACAGTAATGGTTCACA 57.049 33.333 0.00 0.00 0.00 3.58
4037 4549 8.299570 AGATTTGAATTGACAGTAATGGTTCAC 58.700 33.333 0.00 0.00 0.00 3.18
4038 4550 8.408043 AGATTTGAATTGACAGTAATGGTTCA 57.592 30.769 0.00 0.00 0.00 3.18
4039 4551 9.132521 CAAGATTTGAATTGACAGTAATGGTTC 57.867 33.333 0.00 0.00 0.00 3.62
4040 4552 8.641541 ACAAGATTTGAATTGACAGTAATGGTT 58.358 29.630 0.00 0.00 0.00 3.67
4041 4553 8.181904 ACAAGATTTGAATTGACAGTAATGGT 57.818 30.769 0.00 0.00 0.00 3.55
4042 4554 9.480053 AAACAAGATTTGAATTGACAGTAATGG 57.520 29.630 0.00 0.00 0.00 3.16
4044 4556 8.981647 GCAAACAAGATTTGAATTGACAGTAAT 58.018 29.630 3.62 0.00 34.97 1.89
4045 4557 7.437862 GGCAAACAAGATTTGAATTGACAGTAA 59.562 33.333 3.62 0.00 38.22 2.24
4046 4558 6.922957 GGCAAACAAGATTTGAATTGACAGTA 59.077 34.615 3.62 0.00 38.22 2.74
4047 4559 5.754890 GGCAAACAAGATTTGAATTGACAGT 59.245 36.000 3.62 0.00 38.22 3.55
4048 4560 5.754406 TGGCAAACAAGATTTGAATTGACAG 59.246 36.000 12.88 0.00 40.94 3.51
4049 4561 5.668471 TGGCAAACAAGATTTGAATTGACA 58.332 33.333 12.88 12.88 42.33 3.58
4050 4562 6.203338 ACATGGCAAACAAGATTTGAATTGAC 59.797 34.615 0.00 11.05 38.55 3.18
4051 4563 6.289834 ACATGGCAAACAAGATTTGAATTGA 58.710 32.000 0.00 0.00 34.97 2.57
4052 4564 6.548441 ACATGGCAAACAAGATTTGAATTG 57.452 33.333 0.00 2.67 35.59 2.32
4053 4565 8.851541 ATAACATGGCAAACAAGATTTGAATT 57.148 26.923 0.00 0.00 0.00 2.17
4054 4566 9.941325 TTATAACATGGCAAACAAGATTTGAAT 57.059 25.926 0.00 0.00 0.00 2.57
4055 4567 9.941325 ATTATAACATGGCAAACAAGATTTGAA 57.059 25.926 0.00 0.00 0.00 2.69
4056 4568 9.368674 CATTATAACATGGCAAACAAGATTTGA 57.631 29.630 0.00 0.00 0.00 2.69
4057 4569 9.368674 TCATTATAACATGGCAAACAAGATTTG 57.631 29.630 0.00 0.00 0.00 2.32
4058 4570 9.369904 GTCATTATAACATGGCAAACAAGATTT 57.630 29.630 0.00 0.00 0.00 2.17
4059 4571 8.530311 TGTCATTATAACATGGCAAACAAGATT 58.470 29.630 0.00 0.00 35.80 2.40
4060 4572 8.065473 TGTCATTATAACATGGCAAACAAGAT 57.935 30.769 0.00 0.00 35.80 2.40
4061 4573 7.459795 TGTCATTATAACATGGCAAACAAGA 57.540 32.000 0.00 0.00 35.80 3.02
4062 4574 8.531622 TTTGTCATTATAACATGGCAAACAAG 57.468 30.769 12.58 0.00 46.79 3.16
4089 4601 9.540538 AGAGCTAACATGTTGGTCTATAGATAT 57.459 33.333 26.73 10.12 36.88 1.63
4090 4602 8.941995 AGAGCTAACATGTTGGTCTATAGATA 57.058 34.615 26.73 5.40 36.88 1.98
4091 4603 7.847711 AGAGCTAACATGTTGGTCTATAGAT 57.152 36.000 26.73 14.13 36.88 1.98
4092 4604 7.661536 AAGAGCTAACATGTTGGTCTATAGA 57.338 36.000 27.46 0.00 37.54 1.98
4093 4605 8.200792 AGAAAGAGCTAACATGTTGGTCTATAG 58.799 37.037 27.46 16.22 37.54 1.31
4094 4606 7.981789 CAGAAAGAGCTAACATGTTGGTCTATA 59.018 37.037 27.46 8.40 37.54 1.31
4095 4607 6.820656 CAGAAAGAGCTAACATGTTGGTCTAT 59.179 38.462 27.46 18.52 37.54 1.98
4096 4608 6.166279 CAGAAAGAGCTAACATGTTGGTCTA 58.834 40.000 27.46 9.55 37.54 2.59
4097 4609 4.999950 CAGAAAGAGCTAACATGTTGGTCT 59.000 41.667 24.44 24.44 39.79 3.85
4098 4610 4.757149 ACAGAAAGAGCTAACATGTTGGTC 59.243 41.667 21.42 21.77 0.00 4.02
4099 4611 4.718961 ACAGAAAGAGCTAACATGTTGGT 58.281 39.130 21.42 15.43 0.00 3.67
4100 4612 6.820656 AGATACAGAAAGAGCTAACATGTTGG 59.179 38.462 21.42 19.12 0.00 3.77
4101 4613 7.547019 TGAGATACAGAAAGAGCTAACATGTTG 59.453 37.037 21.42 11.79 0.00 3.33
4102 4614 7.547370 GTGAGATACAGAAAGAGCTAACATGTT 59.453 37.037 16.68 16.68 0.00 2.71
4103 4615 7.038659 GTGAGATACAGAAAGAGCTAACATGT 58.961 38.462 0.00 0.00 0.00 3.21
4104 4616 6.478344 GGTGAGATACAGAAAGAGCTAACATG 59.522 42.308 0.00 0.00 0.00 3.21
4105 4617 6.155221 TGGTGAGATACAGAAAGAGCTAACAT 59.845 38.462 0.00 0.00 0.00 2.71
4106 4618 5.480422 TGGTGAGATACAGAAAGAGCTAACA 59.520 40.000 0.00 0.00 0.00 2.41
4107 4619 5.808030 GTGGTGAGATACAGAAAGAGCTAAC 59.192 44.000 0.00 0.00 0.00 2.34
4108 4620 5.480422 TGTGGTGAGATACAGAAAGAGCTAA 59.520 40.000 0.00 0.00 0.00 3.09
4109 4621 5.016831 TGTGGTGAGATACAGAAAGAGCTA 58.983 41.667 0.00 0.00 0.00 3.32
4110 4622 3.834813 TGTGGTGAGATACAGAAAGAGCT 59.165 43.478 0.00 0.00 0.00 4.09
4111 4623 4.193826 TGTGGTGAGATACAGAAAGAGC 57.806 45.455 0.00 0.00 0.00 4.09
4112 4624 8.777865 TTTATTGTGGTGAGATACAGAAAGAG 57.222 34.615 0.00 0.00 0.00 2.85
4113 4625 8.375506 ACTTTATTGTGGTGAGATACAGAAAGA 58.624 33.333 14.97 0.00 36.32 2.52
4114 4626 8.446273 CACTTTATTGTGGTGAGATACAGAAAG 58.554 37.037 0.00 0.00 37.46 2.62
4115 4627 7.936847 ACACTTTATTGTGGTGAGATACAGAAA 59.063 33.333 0.00 0.00 41.84 2.52
4116 4628 7.387673 CACACTTTATTGTGGTGAGATACAGAA 59.612 37.037 0.00 0.00 42.79 3.02
4117 4629 6.873605 CACACTTTATTGTGGTGAGATACAGA 59.126 38.462 0.00 0.00 42.79 3.41
4118 4630 7.065216 CACACTTTATTGTGGTGAGATACAG 57.935 40.000 0.00 0.00 42.79 2.74
4129 4641 4.749245 GTGAGACCCACACTTTATTGTG 57.251 45.455 0.00 0.00 45.57 3.33
4138 4650 5.391873 TTGGGATCAAGTGAGACCCACAC 62.392 52.174 21.21 0.00 46.43 3.82
4139 4651 3.296602 TTGGGATCAAGTGAGACCCACA 61.297 50.000 21.21 13.43 46.43 4.17
4140 4652 0.984230 TGGGATCAAGTGAGACCCAC 59.016 55.000 18.93 0.00 44.02 4.61
4141 4653 1.351017 GTTGGGATCAAGTGAGACCCA 59.649 52.381 18.93 18.93 45.73 4.51
4142 4654 1.351017 TGTTGGGATCAAGTGAGACCC 59.649 52.381 15.34 15.34 41.65 4.46
4143 4655 2.859165 TGTTGGGATCAAGTGAGACC 57.141 50.000 0.00 0.00 32.92 3.85
4144 4656 4.074970 ACATTGTTGGGATCAAGTGAGAC 58.925 43.478 0.00 0.00 32.92 3.36
4145 4657 4.371624 ACATTGTTGGGATCAAGTGAGA 57.628 40.909 0.00 0.00 32.92 3.27
4146 4658 4.763793 AGAACATTGTTGGGATCAAGTGAG 59.236 41.667 6.80 0.00 32.92 3.51
4147 4659 4.728772 AGAACATTGTTGGGATCAAGTGA 58.271 39.130 6.80 0.00 32.92 3.41
4148 4660 5.458041 AAGAACATTGTTGGGATCAAGTG 57.542 39.130 6.80 0.00 32.92 3.16
4149 4661 7.781324 AATAAGAACATTGTTGGGATCAAGT 57.219 32.000 6.80 0.00 32.92 3.16
4150 4662 9.143631 GAAAATAAGAACATTGTTGGGATCAAG 57.856 33.333 6.80 0.00 32.92 3.02
4151 4663 8.869109 AGAAAATAAGAACATTGTTGGGATCAA 58.131 29.630 6.80 0.00 0.00 2.57
4152 4664 8.421249 AGAAAATAAGAACATTGTTGGGATCA 57.579 30.769 6.80 0.00 0.00 2.92
4153 4665 8.743714 AGAGAAAATAAGAACATTGTTGGGATC 58.256 33.333 6.80 0.00 0.00 3.36
4154 4666 8.655935 AGAGAAAATAAGAACATTGTTGGGAT 57.344 30.769 6.80 0.00 0.00 3.85
4155 4667 9.581289 TTAGAGAAAATAAGAACATTGTTGGGA 57.419 29.630 6.80 0.00 0.00 4.37
4175 4687 9.680315 GAGTAAGCTAGCGAATAATTTTAGAGA 57.320 33.333 9.55 0.00 0.00 3.10
4176 4688 8.917655 GGAGTAAGCTAGCGAATAATTTTAGAG 58.082 37.037 9.55 0.00 0.00 2.43
4177 4689 8.639761 AGGAGTAAGCTAGCGAATAATTTTAGA 58.360 33.333 9.55 0.00 0.00 2.10
4178 4690 8.819643 AGGAGTAAGCTAGCGAATAATTTTAG 57.180 34.615 9.55 0.00 0.00 1.85
4180 4692 9.043079 GTTAGGAGTAAGCTAGCGAATAATTTT 57.957 33.333 9.55 0.00 0.00 1.82
4181 4693 8.202137 TGTTAGGAGTAAGCTAGCGAATAATTT 58.798 33.333 9.55 0.00 0.00 1.82
4182 4694 7.723324 TGTTAGGAGTAAGCTAGCGAATAATT 58.277 34.615 9.55 0.00 0.00 1.40
4183 4695 7.286215 TGTTAGGAGTAAGCTAGCGAATAAT 57.714 36.000 9.55 3.50 0.00 1.28
4184 4696 6.704289 TGTTAGGAGTAAGCTAGCGAATAA 57.296 37.500 9.55 0.80 0.00 1.40
4185 4697 6.704289 TTGTTAGGAGTAAGCTAGCGAATA 57.296 37.500 9.55 1.33 0.00 1.75
4186 4698 5.593010 CTTGTTAGGAGTAAGCTAGCGAAT 58.407 41.667 9.55 0.00 0.00 3.34
4187 4699 4.677250 GCTTGTTAGGAGTAAGCTAGCGAA 60.677 45.833 9.55 0.00 42.55 4.70
4188 4700 3.181489 GCTTGTTAGGAGTAAGCTAGCGA 60.181 47.826 9.55 0.00 42.55 4.93
4189 4701 3.117046 GCTTGTTAGGAGTAAGCTAGCG 58.883 50.000 9.55 0.00 42.55 4.26
4190 4702 3.117046 CGCTTGTTAGGAGTAAGCTAGC 58.883 50.000 6.62 6.62 43.40 3.42
4191 4703 3.491104 CCCGCTTGTTAGGAGTAAGCTAG 60.491 52.174 0.00 0.00 43.40 3.42
4192 4704 2.429610 CCCGCTTGTTAGGAGTAAGCTA 59.570 50.000 0.00 0.00 43.40 3.32
4193 4705 1.207329 CCCGCTTGTTAGGAGTAAGCT 59.793 52.381 0.00 0.00 43.40 3.74
4194 4706 1.653151 CCCGCTTGTTAGGAGTAAGC 58.347 55.000 0.00 0.00 42.45 3.09
4195 4707 1.553704 ACCCCGCTTGTTAGGAGTAAG 59.446 52.381 0.00 0.00 0.00 2.34
4196 4708 1.551883 GACCCCGCTTGTTAGGAGTAA 59.448 52.381 0.00 0.00 0.00 2.24
4197 4709 1.188863 GACCCCGCTTGTTAGGAGTA 58.811 55.000 0.00 0.00 0.00 2.59
4198 4710 1.551019 GGACCCCGCTTGTTAGGAGT 61.551 60.000 0.00 0.00 0.00 3.85
4199 4711 1.221021 GGACCCCGCTTGTTAGGAG 59.779 63.158 0.00 0.00 0.00 3.69
4200 4712 1.536907 TGGACCCCGCTTGTTAGGA 60.537 57.895 0.00 0.00 0.00 2.94
4201 4713 1.376812 GTGGACCCCGCTTGTTAGG 60.377 63.158 0.00 0.00 0.00 2.69
4202 4714 0.953960 GTGTGGACCCCGCTTGTTAG 60.954 60.000 0.00 0.00 34.70 2.34
4203 4715 1.071814 GTGTGGACCCCGCTTGTTA 59.928 57.895 0.00 0.00 34.70 2.41
4204 4716 2.203294 GTGTGGACCCCGCTTGTT 60.203 61.111 0.00 0.00 34.70 2.83
4205 4717 1.412453 TAAGTGTGGACCCCGCTTGT 61.412 55.000 12.47 0.00 34.66 3.16
4206 4718 0.035439 ATAAGTGTGGACCCCGCTTG 60.035 55.000 12.47 0.00 34.66 4.01
4207 4719 0.252197 GATAAGTGTGGACCCCGCTT 59.748 55.000 7.92 7.92 36.65 4.68
4208 4720 0.617820 AGATAAGTGTGGACCCCGCT 60.618 55.000 0.00 0.00 34.70 5.52
4209 4721 0.252197 AAGATAAGTGTGGACCCCGC 59.748 55.000 0.00 0.00 34.12 6.13
4210 4722 2.290071 ACAAAGATAAGTGTGGACCCCG 60.290 50.000 0.00 0.00 0.00 5.73
4211 4723 3.081804 CACAAAGATAAGTGTGGACCCC 58.918 50.000 0.00 0.00 41.19 4.95
4212 4724 4.015872 TCACAAAGATAAGTGTGGACCC 57.984 45.455 4.13 0.00 44.29 4.46
4213 4725 6.575162 ATTTCACAAAGATAAGTGTGGACC 57.425 37.500 4.13 0.00 44.29 4.46
4214 4726 8.547967 TCTATTTCACAAAGATAAGTGTGGAC 57.452 34.615 4.13 0.00 44.29 4.02
4215 4727 9.567776 TTTCTATTTCACAAAGATAAGTGTGGA 57.432 29.630 4.13 0.00 44.29 4.02
4216 4728 9.831737 CTTTCTATTTCACAAAGATAAGTGTGG 57.168 33.333 4.13 0.00 44.29 4.17
4219 4731 9.766277 GCTCTTTCTATTTCACAAAGATAAGTG 57.234 33.333 0.00 0.00 35.96 3.16
4220 4732 9.732130 AGCTCTTTCTATTTCACAAAGATAAGT 57.268 29.630 0.00 0.00 35.96 2.24
4221 4733 9.985318 CAGCTCTTTCTATTTCACAAAGATAAG 57.015 33.333 0.00 0.00 35.96 1.73
4222 4734 9.725019 TCAGCTCTTTCTATTTCACAAAGATAA 57.275 29.630 0.00 0.00 35.96 1.75
4223 4735 9.155975 GTCAGCTCTTTCTATTTCACAAAGATA 57.844 33.333 0.00 0.00 35.96 1.98
4224 4736 7.663081 TGTCAGCTCTTTCTATTTCACAAAGAT 59.337 33.333 0.00 0.00 35.96 2.40
4225 4737 6.992123 TGTCAGCTCTTTCTATTTCACAAAGA 59.008 34.615 0.00 0.00 35.38 2.52
4226 4738 7.194607 TGTCAGCTCTTTCTATTTCACAAAG 57.805 36.000 0.00 0.00 0.00 2.77
4227 4739 7.229306 ACATGTCAGCTCTTTCTATTTCACAAA 59.771 33.333 0.00 0.00 0.00 2.83
4228 4740 6.712095 ACATGTCAGCTCTTTCTATTTCACAA 59.288 34.615 0.00 0.00 0.00 3.33
4229 4741 6.148315 CACATGTCAGCTCTTTCTATTTCACA 59.852 38.462 0.00 0.00 0.00 3.58
4230 4742 6.402983 CCACATGTCAGCTCTTTCTATTTCAC 60.403 42.308 0.00 0.00 0.00 3.18
4231 4743 5.645067 CCACATGTCAGCTCTTTCTATTTCA 59.355 40.000 0.00 0.00 0.00 2.69
4232 4744 5.065731 CCCACATGTCAGCTCTTTCTATTTC 59.934 44.000 0.00 0.00 0.00 2.17
4233 4745 4.946157 CCCACATGTCAGCTCTTTCTATTT 59.054 41.667 0.00 0.00 0.00 1.40
4234 4746 4.018960 ACCCACATGTCAGCTCTTTCTATT 60.019 41.667 0.00 0.00 0.00 1.73
4235 4747 3.521126 ACCCACATGTCAGCTCTTTCTAT 59.479 43.478 0.00 0.00 0.00 1.98
4236 4748 2.906389 ACCCACATGTCAGCTCTTTCTA 59.094 45.455 0.00 0.00 0.00 2.10
4237 4749 1.701847 ACCCACATGTCAGCTCTTTCT 59.298 47.619 0.00 0.00 0.00 2.52
4238 4750 2.191128 ACCCACATGTCAGCTCTTTC 57.809 50.000 0.00 0.00 0.00 2.62
4239 4751 4.141620 CCTATACCCACATGTCAGCTCTTT 60.142 45.833 0.00 0.00 0.00 2.52
4240 4752 3.389329 CCTATACCCACATGTCAGCTCTT 59.611 47.826 0.00 0.00 0.00 2.85
4241 4753 2.968574 CCTATACCCACATGTCAGCTCT 59.031 50.000 0.00 0.00 0.00 4.09
4242 4754 2.037772 CCCTATACCCACATGTCAGCTC 59.962 54.545 0.00 0.00 0.00 4.09
4243 4755 2.050144 CCCTATACCCACATGTCAGCT 58.950 52.381 0.00 0.00 0.00 4.24
4244 4756 1.072331 CCCCTATACCCACATGTCAGC 59.928 57.143 0.00 0.00 0.00 4.26
4245 4757 2.408565 ACCCCTATACCCACATGTCAG 58.591 52.381 0.00 0.00 0.00 3.51
4246 4758 2.579624 ACCCCTATACCCACATGTCA 57.420 50.000 0.00 0.00 0.00 3.58
4247 4759 5.578157 AAATACCCCTATACCCACATGTC 57.422 43.478 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.