Multiple sequence alignment - TraesCS4B01G345400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G345400 chr4B 100.000 4610 0 0 1 4610 638984982 638989591 0.000000e+00 8514.0
1 TraesCS4B01G345400 chr4B 87.288 1062 127 4 2408 3465 654130549 654131606 0.000000e+00 1206.0
2 TraesCS4B01G345400 chr4B 86.389 1058 113 16 2408 3461 654125314 654126344 0.000000e+00 1127.0
3 TraesCS4B01G345400 chr4B 80.591 1422 190 53 962 2333 654123929 654125314 0.000000e+00 1018.0
4 TraesCS4B01G345400 chr4B 91.840 674 40 9 3026 3695 638815398 638814736 0.000000e+00 926.0
5 TraesCS4B01G345400 chr4B 78.459 571 96 18 1030 1582 654128698 654129259 9.490000e-92 348.0
6 TraesCS4B01G345400 chr4B 75.096 779 132 41 2652 3411 1244455 1243720 1.610000e-79 307.0
7 TraesCS4B01G345400 chr4B 80.620 387 69 6 2562 2945 431796099 431795716 1.250000e-75 294.0
8 TraesCS4B01G345400 chr4B 75.231 432 95 11 2982 3407 431795706 431795281 1.310000e-45 195.0
9 TraesCS4B01G345400 chr4B 92.647 68 4 1 3814 3880 638699225 638699158 3.800000e-16 97.1
10 TraesCS4B01G345400 chr4B 90.476 63 3 1 3749 3808 638814670 638814608 3.820000e-11 80.5
11 TraesCS4B01G345400 chr4D 93.831 2934 151 14 707 3618 497664817 497667742 0.000000e+00 4388.0
12 TraesCS4B01G345400 chr4D 94.250 400 22 1 1772 2171 497660967 497661365 1.100000e-170 610.0
13 TraesCS4B01G345400 chr4D 91.129 248 21 1 3372 3618 497696001 497696248 7.390000e-88 335.0
14 TraesCS4B01G345400 chr4D 81.333 375 27 16 3509 3869 497649167 497648822 9.830000e-67 265.0
15 TraesCS4B01G345400 chr4D 75.632 435 83 19 2987 3408 630576 631000 1.310000e-45 195.0
16 TraesCS4B01G345400 chr4D 74.769 432 97 11 2982 3407 349189937 349189512 2.830000e-42 183.0
17 TraesCS4B01G345400 chr4D 87.097 93 11 1 233 325 369123594 369123503 2.270000e-18 104.0
18 TraesCS4B01G345400 chr4D 94.444 36 1 1 2988 3023 401077206 401077172 2.000000e-03 54.7
19 TraesCS4B01G345400 chr4D 94.444 36 1 1 2988 3023 417608423 417608389 2.000000e-03 54.7
20 TraesCS4B01G345400 chr5A 89.500 3400 244 42 534 3851 678085269 678081901 0.000000e+00 4196.0
21 TraesCS4B01G345400 chr5A 85.879 1211 142 17 2408 3612 691813080 691814267 0.000000e+00 1262.0
22 TraesCS4B01G345400 chr5A 79.898 1373 190 47 997 2333 691811758 691813080 0.000000e+00 928.0
23 TraesCS4B01G345400 chr5A 79.539 347 20 20 3516 3848 677952080 677951771 2.810000e-47 200.0
24 TraesCS4B01G345400 chr5A 93.939 66 4 0 485 550 21415140 21415075 2.930000e-17 100.0
25 TraesCS4B01G345400 chr5A 98.246 57 1 0 485 541 581923788 581923732 2.930000e-17 100.0
26 TraesCS4B01G345400 chr5A 91.045 67 5 1 491 557 640625044 640624979 6.350000e-14 89.8
27 TraesCS4B01G345400 chr5A 83.696 92 14 1 236 327 489907315 489907225 8.220000e-13 86.1
28 TraesCS4B01G345400 chr2D 87.295 1039 117 7 2428 3462 602008526 602009553 0.000000e+00 1173.0
29 TraesCS4B01G345400 chr2D 91.848 736 53 6 3879 4608 135598266 135599000 0.000000e+00 1020.0
30 TraesCS4B01G345400 chr2D 80.806 1365 206 41 997 2333 602007170 602008506 0.000000e+00 1018.0
31 TraesCS4B01G345400 chr2B 88.247 987 104 5 2428 3411 732223535 732224512 0.000000e+00 1170.0
32 TraesCS4B01G345400 chr2B 80.451 1330 202 38 1034 2333 732222214 732223515 0.000000e+00 963.0
33 TraesCS4B01G345400 chr2B 93.210 162 11 0 325 486 650282375 650282214 5.960000e-59 239.0
34 TraesCS4B01G345400 chr3D 93.197 735 45 5 3879 4610 159575164 159574432 0.000000e+00 1075.0
35 TraesCS4B01G345400 chr3D 91.929 731 52 6 3885 4610 228166314 228165586 0.000000e+00 1016.0
36 TraesCS4B01G345400 chr3D 73.326 896 177 42 2533 3409 93481124 93481976 1.630000e-69 274.0
37 TraesCS4B01G345400 chr3D 73.092 773 155 46 2652 3408 159786640 159785905 4.640000e-55 226.0
38 TraesCS4B01G345400 chr3D 86.458 96 7 6 233 327 475641660 475641570 2.930000e-17 100.0
39 TraesCS4B01G345400 chr3D 87.805 82 8 2 491 570 64764489 64764408 1.370000e-15 95.3
40 TraesCS4B01G345400 chr7D 92.130 737 51 6 3879 4610 581023027 581023761 0.000000e+00 1033.0
41 TraesCS4B01G345400 chr7D 91.973 735 55 4 3879 4610 575750034 575750767 0.000000e+00 1027.0
42 TraesCS4B01G345400 chr7D 91.746 739 53 7 3879 4610 475723522 475724259 0.000000e+00 1020.0
43 TraesCS4B01G345400 chr7D 80.565 283 37 14 2675 2945 25522949 25522673 7.820000e-48 202.0
44 TraesCS4B01G345400 chr5B 91.837 735 56 4 3879 4610 400551799 400552532 0.000000e+00 1022.0
45 TraesCS4B01G345400 chr5B 91.689 734 58 3 3879 4610 492105319 492104587 0.000000e+00 1014.0
46 TraesCS4B01G345400 chr5B 80.064 938 148 26 2489 3411 6919157 6918244 0.000000e+00 660.0
47 TraesCS4B01G345400 chr5B 82.609 299 40 11 2648 2940 515185806 515186098 2.130000e-63 254.0
48 TraesCS4B01G345400 chr1B 91.973 735 50 8 3879 4610 322417519 322418247 0.000000e+00 1022.0
49 TraesCS4B01G345400 chr1B 93.252 163 11 0 324 486 543806105 543805943 1.660000e-59 241.0
50 TraesCS4B01G345400 chr1B 92.727 165 12 0 323 487 637500083 637500247 5.960000e-59 239.0
51 TraesCS4B01G345400 chr4A 84.731 930 122 11 2489 3417 731003743 731002833 0.000000e+00 913.0
52 TraesCS4B01G345400 chr4A 75.793 851 169 18 2562 3407 115788309 115789127 3.340000e-106 396.0
53 TraesCS4B01G345400 chr4A 80.212 283 38 14 2675 2945 709977801 709977525 3.640000e-46 196.0
54 TraesCS4B01G345400 chr4A 95.385 65 3 0 475 539 215247655 215247719 2.270000e-18 104.0
55 TraesCS4B01G345400 chr4A 98.246 57 1 0 485 541 56266405 56266349 2.930000e-17 100.0
56 TraesCS4B01G345400 chr3B 93.865 163 10 0 326 488 243784045 243784207 3.560000e-61 246.0
57 TraesCS4B01G345400 chr3B 91.429 175 13 2 313 486 1230184 1230011 5.960000e-59 239.0
58 TraesCS4B01G345400 chr3B 91.329 173 12 3 316 487 482668444 482668614 2.770000e-57 233.0
59 TraesCS4B01G345400 chr3B 84.211 95 8 4 233 327 798560096 798560009 8.220000e-13 86.1
60 TraesCS4B01G345400 chr7B 93.252 163 11 0 324 486 424980077 424979915 1.660000e-59 241.0
61 TraesCS4B01G345400 chr3A 91.061 179 13 2 315 490 195872948 195872770 5.960000e-59 239.0
62 TraesCS4B01G345400 chr3A 98.276 58 1 0 484 541 41405681 41405738 8.160000e-18 102.0
63 TraesCS4B01G345400 chr3A 98.246 57 1 0 485 541 127972311 127972367 2.930000e-17 100.0
64 TraesCS4B01G345400 chr6B 91.176 170 13 2 326 493 699977610 699977441 3.590000e-56 230.0
65 TraesCS4B01G345400 chr5D 82.632 190 27 5 2985 3171 425840945 425841131 3.690000e-36 163.0
66 TraesCS4B01G345400 chr7A 98.246 57 1 0 485 541 128777123 128777179 2.930000e-17 100.0
67 TraesCS4B01G345400 chr7A 84.375 96 12 3 233 327 31655912 31655819 1.770000e-14 91.6
68 TraesCS4B01G345400 chr2A 85.263 95 11 3 233 327 202035639 202035548 1.370000e-15 95.3
69 TraesCS4B01G345400 chr1D 73.793 290 49 23 233 515 436099033 436099302 6.350000e-14 89.8
70 TraesCS4B01G345400 chr1D 91.667 60 1 4 269 327 454304260 454304204 3.820000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G345400 chr4B 638984982 638989591 4609 False 8514.00 8514 100.00000 1 4610 1 chr4B.!!$F1 4609
1 TraesCS4B01G345400 chr4B 654123929 654131606 7677 False 924.75 1206 83.18175 962 3465 4 chr4B.!!$F2 2503
2 TraesCS4B01G345400 chr4B 638814608 638815398 790 True 503.25 926 91.15800 3026 3808 2 chr4B.!!$R4 782
3 TraesCS4B01G345400 chr4B 1243720 1244455 735 True 307.00 307 75.09600 2652 3411 1 chr4B.!!$R1 759
4 TraesCS4B01G345400 chr4B 431795281 431796099 818 True 244.50 294 77.92550 2562 3407 2 chr4B.!!$R3 845
5 TraesCS4B01G345400 chr4D 497660967 497667742 6775 False 2499.00 4388 94.04050 707 3618 2 chr4D.!!$F3 2911
6 TraesCS4B01G345400 chr5A 678081901 678085269 3368 True 4196.00 4196 89.50000 534 3851 1 chr5A.!!$R6 3317
7 TraesCS4B01G345400 chr5A 691811758 691814267 2509 False 1095.00 1262 82.88850 997 3612 2 chr5A.!!$F1 2615
8 TraesCS4B01G345400 chr2D 602007170 602009553 2383 False 1095.50 1173 84.05050 997 3462 2 chr2D.!!$F2 2465
9 TraesCS4B01G345400 chr2D 135598266 135599000 734 False 1020.00 1020 91.84800 3879 4608 1 chr2D.!!$F1 729
10 TraesCS4B01G345400 chr2B 732222214 732224512 2298 False 1066.50 1170 84.34900 1034 3411 2 chr2B.!!$F1 2377
11 TraesCS4B01G345400 chr3D 159574432 159575164 732 True 1075.00 1075 93.19700 3879 4610 1 chr3D.!!$R2 731
12 TraesCS4B01G345400 chr3D 228165586 228166314 728 True 1016.00 1016 91.92900 3885 4610 1 chr3D.!!$R4 725
13 TraesCS4B01G345400 chr3D 93481124 93481976 852 False 274.00 274 73.32600 2533 3409 1 chr3D.!!$F1 876
14 TraesCS4B01G345400 chr3D 159785905 159786640 735 True 226.00 226 73.09200 2652 3408 1 chr3D.!!$R3 756
15 TraesCS4B01G345400 chr7D 581023027 581023761 734 False 1033.00 1033 92.13000 3879 4610 1 chr7D.!!$F3 731
16 TraesCS4B01G345400 chr7D 575750034 575750767 733 False 1027.00 1027 91.97300 3879 4610 1 chr7D.!!$F2 731
17 TraesCS4B01G345400 chr7D 475723522 475724259 737 False 1020.00 1020 91.74600 3879 4610 1 chr7D.!!$F1 731
18 TraesCS4B01G345400 chr5B 400551799 400552532 733 False 1022.00 1022 91.83700 3879 4610 1 chr5B.!!$F1 731
19 TraesCS4B01G345400 chr5B 492104587 492105319 732 True 1014.00 1014 91.68900 3879 4610 1 chr5B.!!$R2 731
20 TraesCS4B01G345400 chr5B 6918244 6919157 913 True 660.00 660 80.06400 2489 3411 1 chr5B.!!$R1 922
21 TraesCS4B01G345400 chr1B 322417519 322418247 728 False 1022.00 1022 91.97300 3879 4610 1 chr1B.!!$F1 731
22 TraesCS4B01G345400 chr4A 731002833 731003743 910 True 913.00 913 84.73100 2489 3417 1 chr4A.!!$R3 928
23 TraesCS4B01G345400 chr4A 115788309 115789127 818 False 396.00 396 75.79300 2562 3407 1 chr4A.!!$F1 845

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
236 237 0.035036 TTCGTGGGAATACCGTTGCA 59.965 50.0 0.00 0.0 44.64 4.08 F
1807 5043 0.600255 CCCGATCATCTACAACCCGC 60.600 60.0 0.00 0.0 0.00 6.13 F
2111 5359 0.101759 TATCTTGACTACGCGGCCAC 59.898 55.0 12.47 0.0 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2091 5339 1.037493 TGGCCGCGTAGTCAAGATAT 58.963 50.0 4.92 0.0 0.00 1.63 R
3507 12009 0.101219 CGTCGTCCATCATGAGCAGA 59.899 55.0 0.09 0.0 0.00 4.26 R
3875 12405 0.107897 ATGCGTGTGGGCGAGATTAA 60.108 50.0 0.00 0.0 35.06 1.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.902881 AGCCAACTGATCAAGGACTAG 57.097 47.619 11.56 0.00 0.00 2.57
22 23 3.445008 AGCCAACTGATCAAGGACTAGA 58.555 45.455 11.56 0.00 0.00 2.43
23 24 3.840666 AGCCAACTGATCAAGGACTAGAA 59.159 43.478 11.56 0.00 0.00 2.10
24 25 4.081198 AGCCAACTGATCAAGGACTAGAAG 60.081 45.833 11.56 0.00 0.00 2.85
25 26 4.764172 CCAACTGATCAAGGACTAGAAGG 58.236 47.826 0.00 0.00 0.00 3.46
26 27 4.223923 CCAACTGATCAAGGACTAGAAGGT 59.776 45.833 0.00 0.00 0.00 3.50
27 28 5.174395 CAACTGATCAAGGACTAGAAGGTG 58.826 45.833 0.00 0.00 0.00 4.00
29 30 5.087323 ACTGATCAAGGACTAGAAGGTGAA 58.913 41.667 0.00 0.00 0.00 3.18
30 31 5.186797 ACTGATCAAGGACTAGAAGGTGAAG 59.813 44.000 0.00 0.00 0.00 3.02
31 32 3.963428 TCAAGGACTAGAAGGTGAAGC 57.037 47.619 0.00 0.00 0.00 3.86
32 33 2.231478 TCAAGGACTAGAAGGTGAAGCG 59.769 50.000 0.00 0.00 0.00 4.68
33 34 2.217510 AGGACTAGAAGGTGAAGCGA 57.782 50.000 0.00 0.00 0.00 4.93
34 35 2.096248 AGGACTAGAAGGTGAAGCGAG 58.904 52.381 0.00 0.00 0.00 5.03
37 38 1.469308 ACTAGAAGGTGAAGCGAGTCG 59.531 52.381 8.54 8.54 0.00 4.18
38 39 1.738350 CTAGAAGGTGAAGCGAGTCGA 59.262 52.381 18.61 0.00 0.00 4.20
39 40 0.241481 AGAAGGTGAAGCGAGTCGAC 59.759 55.000 18.61 7.70 0.00 4.20
40 41 1.066114 GAAGGTGAAGCGAGTCGACG 61.066 60.000 18.61 0.00 0.00 5.12
41 42 1.512996 AAGGTGAAGCGAGTCGACGA 61.513 55.000 18.61 0.00 35.09 4.20
42 43 1.796749 GGTGAAGCGAGTCGACGAC 60.797 63.158 20.25 20.25 35.09 4.34
44 45 1.964891 TGAAGCGAGTCGACGACCT 60.965 57.895 23.76 11.55 32.18 3.85
45 46 1.512310 GAAGCGAGTCGACGACCTG 60.512 63.158 23.76 17.10 32.18 4.00
46 47 3.612371 AAGCGAGTCGACGACCTGC 62.612 63.158 25.91 25.91 34.73 4.85
48 49 3.733960 CGAGTCGACGACCTGCCA 61.734 66.667 23.76 0.00 32.18 4.92
49 50 2.126424 GAGTCGACGACCTGCCAC 60.126 66.667 23.76 5.88 32.18 5.01
50 51 2.597805 AGTCGACGACCTGCCACT 60.598 61.111 23.76 0.86 32.18 4.00
51 52 1.303074 AGTCGACGACCTGCCACTA 60.303 57.895 23.76 0.00 32.18 2.74
54 55 0.678684 TCGACGACCTGCCACTATGA 60.679 55.000 0.00 0.00 0.00 2.15
55 56 0.172578 CGACGACCTGCCACTATGAA 59.827 55.000 0.00 0.00 0.00 2.57
57 58 2.738643 CGACGACCTGCCACTATGAAAT 60.739 50.000 0.00 0.00 0.00 2.17
59 60 2.236146 ACGACCTGCCACTATGAAATCA 59.764 45.455 0.00 0.00 0.00 2.57
60 61 3.118261 ACGACCTGCCACTATGAAATCAT 60.118 43.478 1.01 1.01 40.22 2.45
61 62 3.496130 CGACCTGCCACTATGAAATCATC 59.504 47.826 0.00 0.00 37.76 2.92
62 63 4.454678 GACCTGCCACTATGAAATCATCA 58.545 43.478 0.00 0.00 43.67 3.07
63 64 4.858850 ACCTGCCACTATGAAATCATCAA 58.141 39.130 0.00 0.00 42.54 2.57
66 67 5.533528 CCTGCCACTATGAAATCATCAATCA 59.466 40.000 0.00 0.00 42.54 2.57
67 68 6.040054 CCTGCCACTATGAAATCATCAATCAA 59.960 38.462 0.00 0.00 42.54 2.57
68 69 7.255836 CCTGCCACTATGAAATCATCAATCAAT 60.256 37.037 0.00 0.00 42.54 2.57
69 70 7.430441 TGCCACTATGAAATCATCAATCAATG 58.570 34.615 0.00 0.00 42.54 2.82
70 71 6.365247 GCCACTATGAAATCATCAATCAATGC 59.635 38.462 0.00 0.00 42.54 3.56
71 72 7.430441 CCACTATGAAATCATCAATCAATGCA 58.570 34.615 0.00 0.00 42.54 3.96
73 74 9.476202 CACTATGAAATCATCAATCAATGCAAT 57.524 29.630 0.00 0.00 42.54 3.56
74 75 9.692749 ACTATGAAATCATCAATCAATGCAATC 57.307 29.630 0.00 0.00 42.54 2.67
75 76 9.914131 CTATGAAATCATCAATCAATGCAATCT 57.086 29.630 0.00 0.00 42.54 2.40
79 80 5.700722 TCATCAATCAATGCAATCTAGCC 57.299 39.130 0.00 0.00 0.00 3.93
81 82 3.807553 TCAATCAATGCAATCTAGCCGA 58.192 40.909 0.00 0.00 0.00 5.54
84 85 1.139654 TCAATGCAATCTAGCCGAGCT 59.860 47.619 0.00 3.87 43.41 4.09
86 87 1.047002 ATGCAATCTAGCCGAGCTCT 58.953 50.000 12.85 0.00 40.44 4.09
88 89 0.103937 GCAATCTAGCCGAGCTCTGT 59.896 55.000 12.85 0.00 40.44 3.41
89 90 1.867698 GCAATCTAGCCGAGCTCTGTC 60.868 57.143 12.85 1.93 40.44 3.51
90 91 1.036707 AATCTAGCCGAGCTCTGTCC 58.963 55.000 12.85 0.00 40.44 4.02
91 92 0.184933 ATCTAGCCGAGCTCTGTCCT 59.815 55.000 12.85 4.98 40.44 3.85
92 93 0.749818 TCTAGCCGAGCTCTGTCCTG 60.750 60.000 12.85 0.00 40.44 3.86
93 94 1.733402 CTAGCCGAGCTCTGTCCTGG 61.733 65.000 12.85 5.40 40.44 4.45
95 96 2.052690 GCCGAGCTCTGTCCTGGTA 61.053 63.158 12.85 0.00 0.00 3.25
96 97 2.010582 GCCGAGCTCTGTCCTGGTAG 62.011 65.000 12.85 0.00 0.00 3.18
98 99 1.315981 CGAGCTCTGTCCTGGTAGCA 61.316 60.000 12.85 0.00 37.44 3.49
99 100 0.174617 GAGCTCTGTCCTGGTAGCAC 59.825 60.000 6.43 5.71 37.44 4.40
100 101 1.219393 GCTCTGTCCTGGTAGCACC 59.781 63.158 0.00 0.00 39.22 5.01
102 103 0.247736 CTCTGTCCTGGTAGCACCAC 59.752 60.000 4.16 0.00 44.79 4.16
104 105 0.036952 CTGTCCTGGTAGCACCACTG 60.037 60.000 4.16 0.45 44.79 3.66
115 116 1.160137 GCACCACTGCTTAGTCAAGG 58.840 55.000 0.00 0.00 40.63 3.61
116 117 1.543429 GCACCACTGCTTAGTCAAGGT 60.543 52.381 0.00 0.00 40.63 3.50
117 118 2.851195 CACCACTGCTTAGTCAAGGTT 58.149 47.619 0.00 0.00 31.96 3.50
118 119 2.549754 CACCACTGCTTAGTCAAGGTTG 59.450 50.000 0.00 0.00 31.96 3.77
119 120 1.537202 CCACTGCTTAGTCAAGGTTGC 59.463 52.381 0.00 0.00 31.96 4.17
120 121 2.221169 CACTGCTTAGTCAAGGTTGCA 58.779 47.619 0.00 0.00 31.96 4.08
123 124 1.419762 TGCTTAGTCAAGGTTGCAGGA 59.580 47.619 0.00 0.00 31.96 3.86
125 126 2.704572 CTTAGTCAAGGTTGCAGGAGG 58.295 52.381 0.00 0.00 0.00 4.30
144 145 3.463505 GGCACGATGAGTCACACG 58.536 61.111 16.48 16.48 0.00 4.49
145 146 2.730672 GGCACGATGAGTCACACGC 61.731 63.158 17.55 8.72 0.00 5.34
146 147 1.734477 GCACGATGAGTCACACGCT 60.734 57.895 17.55 6.28 0.00 5.07
147 148 1.678269 GCACGATGAGTCACACGCTC 61.678 60.000 17.55 8.76 0.00 5.03
149 150 1.212751 CGATGAGTCACACGCTCCA 59.787 57.895 0.00 0.00 32.31 3.86
151 152 1.284657 GATGAGTCACACGCTCCATG 58.715 55.000 0.00 0.00 32.31 3.66
152 153 0.897621 ATGAGTCACACGCTCCATGA 59.102 50.000 0.00 0.00 32.31 3.07
154 155 0.038251 GAGTCACACGCTCCATGACA 60.038 55.000 6.40 0.00 44.26 3.58
156 157 0.319900 GTCACACGCTCCATGACAGT 60.320 55.000 0.00 0.00 41.94 3.55
158 159 0.037882 CACACGCTCCATGACAGTCT 60.038 55.000 1.31 0.00 0.00 3.24
159 160 0.681733 ACACGCTCCATGACAGTCTT 59.318 50.000 1.31 0.00 0.00 3.01
160 161 1.337260 ACACGCTCCATGACAGTCTTC 60.337 52.381 1.31 0.00 0.00 2.87
162 163 0.109086 CGCTCCATGACAGTCTTCGT 60.109 55.000 1.31 0.00 0.00 3.85
163 164 1.670087 CGCTCCATGACAGTCTTCGTT 60.670 52.381 1.31 0.00 0.00 3.85
164 165 2.417719 GCTCCATGACAGTCTTCGTTT 58.582 47.619 1.31 0.00 0.00 3.60
165 166 2.808543 GCTCCATGACAGTCTTCGTTTT 59.191 45.455 1.31 0.00 0.00 2.43
166 167 3.251004 GCTCCATGACAGTCTTCGTTTTT 59.749 43.478 1.31 0.00 0.00 1.94
198 199 8.451687 TTGATCACATCAATCATTTCGTTTTC 57.548 30.769 0.00 0.00 43.84 2.29
199 200 6.742264 TGATCACATCAATCATTTCGTTTTCG 59.258 34.615 0.00 0.00 39.54 3.46
200 201 5.996219 TCACATCAATCATTTCGTTTTCGT 58.004 33.333 0.00 0.00 44.46 3.85
201 202 5.850653 TCACATCAATCATTTCGTTTTCGTG 59.149 36.000 0.00 0.00 44.46 4.35
202 203 5.624900 CACATCAATCATTTCGTTTTCGTGT 59.375 36.000 0.00 0.00 44.46 4.49
204 205 6.695278 ACATCAATCATTTCGTTTTCGTGTTT 59.305 30.769 0.00 0.00 44.46 2.83
205 206 7.221838 ACATCAATCATTTCGTTTTCGTGTTTT 59.778 29.630 0.00 0.00 44.46 2.43
206 207 7.513190 TCAATCATTTCGTTTTCGTGTTTTT 57.487 28.000 0.00 0.00 44.46 1.94
209 210 6.692232 TCATTTCGTTTTCGTGTTTTTGTT 57.308 29.167 0.00 0.00 44.46 2.83
210 211 7.106663 TCATTTCGTTTTCGTGTTTTTGTTT 57.893 28.000 0.00 0.00 44.46 2.83
212 213 8.062448 TCATTTCGTTTTCGTGTTTTTGTTTTT 58.938 25.926 0.00 0.00 44.46 1.94
213 214 7.576643 TTTCGTTTTCGTGTTTTTGTTTTTG 57.423 28.000 0.00 0.00 44.46 2.44
214 215 5.131204 TCGTTTTCGTGTTTTTGTTTTTGC 58.869 33.333 0.00 0.00 44.46 3.68
215 216 5.050972 TCGTTTTCGTGTTTTTGTTTTTGCT 60.051 32.000 0.00 0.00 44.46 3.91
217 218 6.139325 CGTTTTCGTGTTTTTGTTTTTGCTTT 59.861 30.769 0.00 0.00 38.65 3.51
218 219 7.304905 CGTTTTCGTGTTTTTGTTTTTGCTTTT 60.305 29.630 0.00 0.00 38.65 2.27
219 220 7.596233 TTTCGTGTTTTTGTTTTTGCTTTTC 57.404 28.000 0.00 0.00 0.00 2.29
220 221 5.366752 TCGTGTTTTTGTTTTTGCTTTTCG 58.633 33.333 0.00 0.00 0.00 3.46
221 222 5.050972 TCGTGTTTTTGTTTTTGCTTTTCGT 60.051 32.000 0.00 0.00 0.00 3.85
223 224 5.338297 GTGTTTTTGTTTTTGCTTTTCGTGG 59.662 36.000 0.00 0.00 0.00 4.94
224 225 4.670227 TTTTGTTTTTGCTTTTCGTGGG 57.330 36.364 0.00 0.00 0.00 4.61
225 226 3.594603 TTGTTTTTGCTTTTCGTGGGA 57.405 38.095 0.00 0.00 0.00 4.37
226 227 3.594603 TGTTTTTGCTTTTCGTGGGAA 57.405 38.095 0.00 0.00 0.00 3.97
228 229 5.263968 TGTTTTTGCTTTTCGTGGGAATA 57.736 34.783 0.00 0.00 30.88 1.75
229 230 5.044558 TGTTTTTGCTTTTCGTGGGAATAC 58.955 37.500 0.00 0.00 30.88 1.89
230 231 3.926821 TTTGCTTTTCGTGGGAATACC 57.073 42.857 0.00 0.00 40.81 2.73
232 233 1.270947 TGCTTTTCGTGGGAATACCGT 60.271 47.619 0.00 0.00 44.64 4.83
233 234 1.808343 GCTTTTCGTGGGAATACCGTT 59.192 47.619 0.00 0.00 44.64 4.44
234 235 2.413634 GCTTTTCGTGGGAATACCGTTG 60.414 50.000 0.00 0.00 44.64 4.10
235 236 1.158434 TTTCGTGGGAATACCGTTGC 58.842 50.000 0.00 0.00 44.64 4.17
236 237 0.035036 TTCGTGGGAATACCGTTGCA 59.965 50.000 0.00 0.00 44.64 4.08
237 238 0.671163 TCGTGGGAATACCGTTGCAC 60.671 55.000 0.00 0.00 44.64 4.57
238 239 0.951525 CGTGGGAATACCGTTGCACA 60.952 55.000 0.00 0.00 44.64 4.57
240 241 1.400494 GTGGGAATACCGTTGCACATC 59.600 52.381 0.00 0.00 44.64 3.06
242 243 2.502130 TGGGAATACCGTTGCACATCTA 59.498 45.455 0.00 0.00 44.64 1.98
244 245 3.560068 GGGAATACCGTTGCACATCTAAG 59.440 47.826 0.00 0.00 36.97 2.18
247 248 2.831685 ACCGTTGCACATCTAAGTGA 57.168 45.000 0.00 0.00 42.05 3.41
248 249 2.688507 ACCGTTGCACATCTAAGTGAG 58.311 47.619 0.00 0.00 42.05 3.51
250 251 2.413112 CCGTTGCACATCTAAGTGAGTG 59.587 50.000 0.00 0.00 42.05 3.51
251 252 2.413112 CGTTGCACATCTAAGTGAGTGG 59.587 50.000 0.00 0.00 42.05 4.00
252 253 3.664107 GTTGCACATCTAAGTGAGTGGA 58.336 45.455 0.00 0.00 42.05 4.02
253 254 4.256920 GTTGCACATCTAAGTGAGTGGAT 58.743 43.478 0.00 0.00 42.05 3.41
255 256 3.515104 TGCACATCTAAGTGAGTGGATCA 59.485 43.478 0.00 0.00 42.05 2.92
256 257 4.020307 TGCACATCTAAGTGAGTGGATCAA 60.020 41.667 0.00 0.00 42.05 2.57
260 261 5.104610 ACATCTAAGTGAGTGGATCAAGCAT 60.105 40.000 0.00 0.00 40.43 3.79
261 262 6.098838 ACATCTAAGTGAGTGGATCAAGCATA 59.901 38.462 0.00 0.00 40.43 3.14
262 263 6.544928 TCTAAGTGAGTGGATCAAGCATAA 57.455 37.500 0.00 0.00 40.43 1.90
263 264 6.946340 TCTAAGTGAGTGGATCAAGCATAAA 58.054 36.000 0.00 0.00 40.43 1.40
264 265 7.394016 TCTAAGTGAGTGGATCAAGCATAAAA 58.606 34.615 0.00 0.00 40.43 1.52
265 266 6.899393 AAGTGAGTGGATCAAGCATAAAAA 57.101 33.333 0.00 0.00 40.43 1.94
266 267 6.506500 AGTGAGTGGATCAAGCATAAAAAG 57.493 37.500 0.00 0.00 40.43 2.27
268 269 5.415701 GTGAGTGGATCAAGCATAAAAAGGA 59.584 40.000 0.00 0.00 40.43 3.36
269 270 5.649395 TGAGTGGATCAAGCATAAAAAGGAG 59.351 40.000 0.00 0.00 34.02 3.69
271 272 6.248433 AGTGGATCAAGCATAAAAAGGAGAA 58.752 36.000 0.00 0.00 0.00 2.87
272 273 6.721208 AGTGGATCAAGCATAAAAAGGAGAAA 59.279 34.615 0.00 0.00 0.00 2.52
273 274 7.031975 GTGGATCAAGCATAAAAAGGAGAAAG 58.968 38.462 0.00 0.00 0.00 2.62
276 277 7.093771 GGATCAAGCATAAAAAGGAGAAAGGAA 60.094 37.037 0.00 0.00 0.00 3.36
278 279 8.017418 TCAAGCATAAAAAGGAGAAAGGAAAA 57.983 30.769 0.00 0.00 0.00 2.29
279 280 8.143835 TCAAGCATAAAAAGGAGAAAGGAAAAG 58.856 33.333 0.00 0.00 0.00 2.27
280 281 7.839680 AGCATAAAAAGGAGAAAGGAAAAGA 57.160 32.000 0.00 0.00 0.00 2.52
281 282 8.250143 AGCATAAAAAGGAGAAAGGAAAAGAA 57.750 30.769 0.00 0.00 0.00 2.52
282 283 8.144478 AGCATAAAAAGGAGAAAGGAAAAGAAC 58.856 33.333 0.00 0.00 0.00 3.01
283 284 7.926018 GCATAAAAAGGAGAAAGGAAAAGAACA 59.074 33.333 0.00 0.00 0.00 3.18
284 285 9.816354 CATAAAAAGGAGAAAGGAAAAGAACAA 57.184 29.630 0.00 0.00 0.00 2.83
286 287 8.777865 AAAAAGGAGAAAGGAAAAGAACAAAG 57.222 30.769 0.00 0.00 0.00 2.77
287 288 7.718334 AAAGGAGAAAGGAAAAGAACAAAGA 57.282 32.000 0.00 0.00 0.00 2.52
290 291 8.134202 AGGAGAAAGGAAAAGAACAAAGAAAA 57.866 30.769 0.00 0.00 0.00 2.29
291 292 8.762645 AGGAGAAAGGAAAAGAACAAAGAAAAT 58.237 29.630 0.00 0.00 0.00 1.82
297 298 9.764363 AAGGAAAAGAACAAAGAAAATATCCAC 57.236 29.630 0.00 0.00 0.00 4.02
298 299 8.923270 AGGAAAAGAACAAAGAAAATATCCACA 58.077 29.630 0.00 0.00 0.00 4.17
299 300 9.710900 GGAAAAGAACAAAGAAAATATCCACAT 57.289 29.630 0.00 0.00 0.00 3.21
309 310 6.963796 AGAAAATATCCACATGAATCTTCGC 58.036 36.000 0.00 0.00 0.00 4.70
310 311 4.997905 AATATCCACATGAATCTTCGCG 57.002 40.909 0.00 0.00 0.00 5.87
311 312 2.315925 ATCCACATGAATCTTCGCGT 57.684 45.000 5.77 0.00 0.00 6.01
312 313 2.951457 TCCACATGAATCTTCGCGTA 57.049 45.000 5.77 0.00 0.00 4.42
328 329 7.817641 TCTTCGCGTAAGATCAATGATATACT 58.182 34.615 5.77 0.00 39.36 2.12
329 330 8.297426 TCTTCGCGTAAGATCAATGATATACTT 58.703 33.333 5.77 8.31 39.36 2.24
330 331 8.449085 TTCGCGTAAGATCAATGATATACTTC 57.551 34.615 5.77 7.10 43.02 3.01
331 332 7.027760 TCGCGTAAGATCAATGATATACTTCC 58.972 38.462 5.77 0.00 43.02 3.46
332 333 7.030165 CGCGTAAGATCAATGATATACTTCCT 58.970 38.462 0.00 0.00 43.02 3.36
333 334 7.219154 CGCGTAAGATCAATGATATACTTCCTC 59.781 40.741 0.00 0.00 43.02 3.71
336 337 7.546250 AAGATCAATGATATACTTCCTCCGT 57.454 36.000 0.00 0.00 0.00 4.69
337 338 7.546250 AGATCAATGATATACTTCCTCCGTT 57.454 36.000 0.00 0.00 0.00 4.44
338 339 7.967908 AGATCAATGATATACTTCCTCCGTTT 58.032 34.615 0.00 0.00 0.00 3.60
339 340 8.091449 AGATCAATGATATACTTCCTCCGTTTC 58.909 37.037 0.00 0.00 0.00 2.78
341 342 8.473358 TCAATGATATACTTCCTCCGTTTCTA 57.527 34.615 0.00 0.00 0.00 2.10
342 343 8.920174 TCAATGATATACTTCCTCCGTTTCTAA 58.080 33.333 0.00 0.00 0.00 2.10
343 344 9.542462 CAATGATATACTTCCTCCGTTTCTAAA 57.458 33.333 0.00 0.00 0.00 1.85
345 346 9.712305 ATGATATACTTCCTCCGTTTCTAAATG 57.288 33.333 0.00 0.00 0.00 2.32
346 347 8.701895 TGATATACTTCCTCCGTTTCTAAATGT 58.298 33.333 0.00 0.00 0.00 2.71
350 351 6.766429 ACTTCCTCCGTTTCTAAATGTAAGT 58.234 36.000 0.00 0.00 0.00 2.24
351 352 6.872547 ACTTCCTCCGTTTCTAAATGTAAGTC 59.127 38.462 0.00 0.00 0.00 3.01
352 353 6.600882 TCCTCCGTTTCTAAATGTAAGTCT 57.399 37.500 0.00 0.00 0.00 3.24
354 355 7.447594 TCCTCCGTTTCTAAATGTAAGTCTTT 58.552 34.615 0.00 0.00 0.00 2.52
355 356 8.587608 TCCTCCGTTTCTAAATGTAAGTCTTTA 58.412 33.333 0.00 0.00 0.00 1.85
356 357 9.379791 CCTCCGTTTCTAAATGTAAGTCTTTAT 57.620 33.333 0.00 0.00 0.00 1.40
382 383 7.877003 AGAGATTTCACTATGGACTACATACG 58.123 38.462 0.00 0.00 41.03 3.06
384 385 6.776116 AGATTTCACTATGGACTACATACGGA 59.224 38.462 0.00 0.00 41.03 4.69
385 386 6.778834 TTTCACTATGGACTACATACGGAA 57.221 37.500 0.00 0.00 41.03 4.30
386 387 6.971726 TTCACTATGGACTACATACGGAAT 57.028 37.500 0.00 0.00 41.03 3.01
387 388 6.327279 TCACTATGGACTACATACGGAATG 57.673 41.667 0.00 0.00 41.03 2.67
391 392 7.872993 CACTATGGACTACATACGGAATGAAAT 59.127 37.037 6.98 0.00 41.03 2.17
392 393 7.872993 ACTATGGACTACATACGGAATGAAATG 59.127 37.037 6.98 0.00 41.03 2.32
397 398 4.771114 ACATACGGAATGAAATGAGGGA 57.229 40.909 6.98 0.00 39.07 4.20
398 399 5.110814 ACATACGGAATGAAATGAGGGAA 57.889 39.130 6.98 0.00 39.07 3.97
400 401 5.765182 ACATACGGAATGAAATGAGGGAATC 59.235 40.000 6.98 0.00 39.07 2.52
401 402 4.510167 ACGGAATGAAATGAGGGAATCT 57.490 40.909 0.00 0.00 0.00 2.40
402 403 5.630415 ACGGAATGAAATGAGGGAATCTA 57.370 39.130 0.00 0.00 0.00 1.98
403 404 5.368989 ACGGAATGAAATGAGGGAATCTAC 58.631 41.667 0.00 0.00 0.00 2.59
404 405 5.104527 ACGGAATGAAATGAGGGAATCTACA 60.105 40.000 0.00 0.00 0.00 2.74
405 406 5.237344 CGGAATGAAATGAGGGAATCTACAC 59.763 44.000 0.00 0.00 0.00 2.90
406 407 6.360618 GGAATGAAATGAGGGAATCTACACT 58.639 40.000 0.00 0.00 0.00 3.55
407 408 6.484977 GGAATGAAATGAGGGAATCTACACTC 59.515 42.308 0.00 0.00 40.36 3.51
414 415 4.943705 TGAGGGAATCTACACTCAAAATGC 59.056 41.667 0.00 0.00 45.61 3.56
415 416 4.922206 AGGGAATCTACACTCAAAATGCA 58.078 39.130 0.00 0.00 0.00 3.96
417 418 5.591877 AGGGAATCTACACTCAAAATGCATC 59.408 40.000 0.00 0.00 0.00 3.91
418 419 5.591877 GGGAATCTACACTCAAAATGCATCT 59.408 40.000 0.00 0.00 0.00 2.90
419 420 6.767902 GGGAATCTACACTCAAAATGCATCTA 59.232 38.462 0.00 0.00 0.00 1.98
420 421 7.446625 GGGAATCTACACTCAAAATGCATCTAT 59.553 37.037 0.00 0.00 0.00 1.98
421 422 9.494271 GGAATCTACACTCAAAATGCATCTATA 57.506 33.333 0.00 0.00 0.00 1.31
428 429 9.224267 ACACTCAAAATGCATCTATATACATCC 57.776 33.333 0.00 0.00 0.00 3.51
429 430 8.385858 CACTCAAAATGCATCTATATACATCCG 58.614 37.037 0.00 0.00 0.00 4.18
430 431 8.097038 ACTCAAAATGCATCTATATACATCCGT 58.903 33.333 0.00 0.00 0.00 4.69
431 432 9.586435 CTCAAAATGCATCTATATACATCCGTA 57.414 33.333 0.00 0.00 0.00 4.02
435 436 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
437 438 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
438 439 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
439 440 7.435488 GCATCTATATACATCCGTATGTGGTTC 59.565 40.741 3.56 0.00 45.99 3.62
440 441 8.466798 CATCTATATACATCCGTATGTGGTTCA 58.533 37.037 3.56 0.00 45.99 3.18
441 442 8.589701 TCTATATACATCCGTATGTGGTTCAT 57.410 34.615 3.56 0.00 45.99 2.57
445 446 7.905604 ATACATCCGTATGTGGTTCATAATG 57.094 36.000 3.56 0.00 45.99 1.90
446 447 5.924356 ACATCCGTATGTGGTTCATAATGA 58.076 37.500 0.00 0.00 44.79 2.57
448 449 6.826231 ACATCCGTATGTGGTTCATAATGAAA 59.174 34.615 0.00 0.00 44.79 2.69
449 450 7.502226 ACATCCGTATGTGGTTCATAATGAAAT 59.498 33.333 0.00 0.00 44.79 2.17
450 451 7.490962 TCCGTATGTGGTTCATAATGAAATC 57.509 36.000 0.00 0.00 38.22 2.17
451 452 7.279615 TCCGTATGTGGTTCATAATGAAATCT 58.720 34.615 0.00 0.00 38.22 2.40
452 453 7.441157 TCCGTATGTGGTTCATAATGAAATCTC 59.559 37.037 0.00 0.00 38.22 2.75
453 454 7.442364 CCGTATGTGGTTCATAATGAAATCTCT 59.558 37.037 0.00 0.00 38.22 3.10
454 455 9.476202 CGTATGTGGTTCATAATGAAATCTCTA 57.524 33.333 0.00 0.00 38.22 2.43
482 483 8.855804 AAGACTTATATTTAGGAACAGAGGGA 57.144 34.615 0.00 0.00 0.00 4.20
484 485 8.068733 AGACTTATATTTAGGAACAGAGGGAGT 58.931 37.037 0.00 0.00 0.00 3.85
485 486 9.364653 GACTTATATTTAGGAACAGAGGGAGTA 57.635 37.037 0.00 0.00 0.00 2.59
486 487 9.369672 ACTTATATTTAGGAACAGAGGGAGTAG 57.630 37.037 0.00 0.00 0.00 2.57
487 488 8.722622 TTATATTTAGGAACAGAGGGAGTAGG 57.277 38.462 0.00 0.00 0.00 3.18
488 489 4.687262 TTTAGGAACAGAGGGAGTAGGA 57.313 45.455 0.00 0.00 0.00 2.94
489 490 4.901785 TTAGGAACAGAGGGAGTAGGAT 57.098 45.455 0.00 0.00 0.00 3.24
490 491 3.786213 AGGAACAGAGGGAGTAGGATT 57.214 47.619 0.00 0.00 0.00 3.01
491 492 4.081695 AGGAACAGAGGGAGTAGGATTT 57.918 45.455 0.00 0.00 0.00 2.17
492 493 5.222278 AGGAACAGAGGGAGTAGGATTTA 57.778 43.478 0.00 0.00 0.00 1.40
493 494 5.212745 AGGAACAGAGGGAGTAGGATTTAG 58.787 45.833 0.00 0.00 0.00 1.85
494 495 5.043281 AGGAACAGAGGGAGTAGGATTTAGA 60.043 44.000 0.00 0.00 0.00 2.10
495 496 5.841783 GGAACAGAGGGAGTAGGATTTAGAT 59.158 44.000 0.00 0.00 0.00 1.98
497 498 5.782925 ACAGAGGGAGTAGGATTTAGATGT 58.217 41.667 0.00 0.00 0.00 3.06
498 499 5.600484 ACAGAGGGAGTAGGATTTAGATGTG 59.400 44.000 0.00 0.00 0.00 3.21
499 500 4.591072 AGAGGGAGTAGGATTTAGATGTGC 59.409 45.833 0.00 0.00 0.00 4.57
500 501 4.298626 AGGGAGTAGGATTTAGATGTGCA 58.701 43.478 0.00 0.00 0.00 4.57
501 502 4.721776 AGGGAGTAGGATTTAGATGTGCAA 59.278 41.667 0.00 0.00 0.00 4.08
502 503 5.370880 AGGGAGTAGGATTTAGATGTGCAAT 59.629 40.000 0.00 0.00 0.00 3.56
505 506 7.445945 GGAGTAGGATTTAGATGTGCAATACT 58.554 38.462 0.00 0.00 0.00 2.12
506 507 7.934120 GGAGTAGGATTTAGATGTGCAATACTT 59.066 37.037 0.00 0.00 0.00 2.24
507 508 9.982651 GAGTAGGATTTAGATGTGCAATACTTA 57.017 33.333 0.00 0.00 0.00 2.24
511 512 7.175641 AGGATTTAGATGTGCAATACTTATGGC 59.824 37.037 0.00 0.00 33.16 4.40
512 513 7.040478 GGATTTAGATGTGCAATACTTATGGCA 60.040 37.037 0.00 0.00 40.19 4.92
551 552 9.134734 CTTTAGCAAAACTGTTGTAACAAAGAA 57.865 29.630 0.00 0.00 38.66 2.52
552 553 6.944557 AGCAAAACTGTTGTAACAAAGAAC 57.055 33.333 0.00 0.00 38.66 3.01
622 630 4.406648 AACATCGACCATAGAGCAATCA 57.593 40.909 0.00 0.00 0.00 2.57
635 643 3.458857 AGAGCAATCAATCATCCAGGAGT 59.541 43.478 0.00 0.00 0.00 3.85
660 668 7.598869 GTGAGAAAAATATCCAGGAAAACAACC 59.401 37.037 0.00 0.00 0.00 3.77
661 669 7.288852 TGAGAAAAATATCCAGGAAAACAACCA 59.711 33.333 0.00 0.00 0.00 3.67
663 671 5.405935 AAATATCCAGGAAAACAACCAGC 57.594 39.130 0.00 0.00 0.00 4.85
664 672 2.380064 ATCCAGGAAAACAACCAGCA 57.620 45.000 0.00 0.00 0.00 4.41
665 673 1.691196 TCCAGGAAAACAACCAGCAG 58.309 50.000 0.00 0.00 0.00 4.24
666 674 0.675633 CCAGGAAAACAACCAGCAGG 59.324 55.000 0.00 0.00 42.21 4.85
667 675 1.691196 CAGGAAAACAACCAGCAGGA 58.309 50.000 0.35 0.00 38.69 3.86
689 697 6.373774 AGGAGTACTTTTCAGCTGAATGAATG 59.626 38.462 28.89 17.92 38.90 2.67
690 698 6.372659 GGAGTACTTTTCAGCTGAATGAATGA 59.627 38.462 28.89 11.01 38.90 2.57
705 716 3.959293 TGAATGAGTGCCACTTGATGAT 58.041 40.909 0.00 0.00 0.00 2.45
722 3827 4.229353 TGATGATGAGTGGGGGAATTAACA 59.771 41.667 0.00 0.00 0.00 2.41
751 3896 0.685458 AATGGCCCAATCACTCCAGC 60.685 55.000 0.00 0.00 31.36 4.85
753 3898 2.825836 GCCCAATCACTCCAGCCG 60.826 66.667 0.00 0.00 0.00 5.52
754 3899 2.671070 CCCAATCACTCCAGCCGT 59.329 61.111 0.00 0.00 0.00 5.68
774 3919 3.513438 ACGCGCTGCCAAACACAA 61.513 55.556 5.73 0.00 0.00 3.33
799 3944 1.966295 GCACACCAATCCCATTCCCAT 60.966 52.381 0.00 0.00 0.00 4.00
800 3945 2.034124 CACACCAATCCCATTCCCATC 58.966 52.381 0.00 0.00 0.00 3.51
802 3947 1.218704 CACCAATCCCATTCCCATCCT 59.781 52.381 0.00 0.00 0.00 3.24
803 3948 1.939511 ACCAATCCCATTCCCATCCTT 59.060 47.619 0.00 0.00 0.00 3.36
804 3949 2.322658 CCAATCCCATTCCCATCCTTG 58.677 52.381 0.00 0.00 0.00 3.61
1508 4738 7.512043 TCGAAAGAATTCACCATCAGGTTCAG 61.512 42.308 8.44 0.00 42.09 3.02
1539 4772 0.741221 GCTCCTCCGCTTTCGTCAAT 60.741 55.000 0.00 0.00 0.00 2.57
1542 4775 1.298157 CCTCCGCTTTCGTCAATGCA 61.298 55.000 0.00 0.00 33.22 3.96
1557 4790 1.830587 ATGCAGTCGAGCTGTTCCCA 61.831 55.000 13.91 6.32 46.64 4.37
1627 4860 2.116772 TCCTGGGGAACGACGACT 59.883 61.111 0.00 0.00 0.00 4.18
1697 4930 4.722700 CGGGCCCAAGGTGACCAG 62.723 72.222 24.92 0.00 0.00 4.00
1801 5037 1.332195 CTCCAGCCCGATCATCTACA 58.668 55.000 0.00 0.00 0.00 2.74
1807 5043 0.600255 CCCGATCATCTACAACCCGC 60.600 60.000 0.00 0.00 0.00 6.13
1827 5069 1.150536 GAACACAAGGGAGGTGGCA 59.849 57.895 0.00 0.00 40.54 4.92
1880 5122 2.805353 CGTGACGGACTTCCTGCG 60.805 66.667 0.00 0.00 40.15 5.18
2053 5295 1.088340 CATTGGCAGCAGAGACCTCG 61.088 60.000 0.00 0.00 34.09 4.63
2077 5325 1.427592 GAATGCTCAGGCGACTCAGC 61.428 60.000 7.45 7.45 40.21 4.26
2086 5334 2.876645 CGACTCAGCCGAACGAGC 60.877 66.667 0.00 0.00 32.21 5.03
2091 5339 1.945354 CTCAGCCGAACGAGCCCTTA 61.945 60.000 0.00 0.00 0.00 2.69
2094 5342 1.000955 CAGCCGAACGAGCCCTTATAT 59.999 52.381 0.00 0.00 0.00 0.86
2095 5343 1.272769 AGCCGAACGAGCCCTTATATC 59.727 52.381 0.00 0.00 0.00 1.63
2097 5345 2.288886 GCCGAACGAGCCCTTATATCTT 60.289 50.000 0.00 0.00 0.00 2.40
2111 5359 0.101759 TATCTTGACTACGCGGCCAC 59.898 55.000 12.47 0.00 0.00 5.01
2145 5393 0.321653 GGAACCTCACCGTCAGCATT 60.322 55.000 0.00 0.00 0.00 3.56
2150 5398 1.915614 CTCACCGTCAGCATTGGCAC 61.916 60.000 0.00 0.00 44.61 5.01
2169 5417 2.736995 TCGTCGAAAAGCAGCGGG 60.737 61.111 0.00 0.00 0.00 6.13
2227 5475 4.838486 CCGTCGACCTGAGCTCGC 62.838 72.222 10.58 0.00 0.00 5.03
2433 5681 2.507944 CAGGAAGGCATCTCCGGG 59.492 66.667 0.00 0.00 40.77 5.73
2462 5713 2.133742 GAGTCGACGAACCGGTCCAA 62.134 60.000 8.04 0.00 33.30 3.53
2605 5856 3.691342 TGTACAAGGGCGCGCTCT 61.691 61.111 31.60 31.60 0.00 4.09
2670 5921 4.351054 CAGGGCCTGCCGGAGTTT 62.351 66.667 22.68 0.00 36.85 2.66
2676 5927 1.376037 CCTGCCGGAGTTTCAGACC 60.376 63.158 5.05 0.00 0.00 3.85
3213 11708 3.352447 CGACCAGATCAACATCGCT 57.648 52.632 0.00 0.00 33.75 4.93
3513 12015 3.166421 TCGTCGACGAGTCTGCTC 58.834 61.111 34.97 0.00 44.22 4.26
3629 12135 1.667595 TCCATCCATCCACCACTTCA 58.332 50.000 0.00 0.00 0.00 3.02
3649 12155 1.241165 TGCACCAATCTCTTGTGCAG 58.759 50.000 12.05 0.00 40.82 4.41
3668 12174 3.697045 GCAGTCTGTCTGTACCACTAGAT 59.303 47.826 0.00 0.00 45.23 1.98
3669 12175 4.201970 GCAGTCTGTCTGTACCACTAGATC 60.202 50.000 0.00 0.00 45.23 2.75
3670 12176 5.189928 CAGTCTGTCTGTACCACTAGATCT 58.810 45.833 0.00 0.00 39.17 2.75
3671 12177 6.350103 CAGTCTGTCTGTACCACTAGATCTA 58.650 44.000 1.69 1.69 39.17 1.98
3695 12201 9.515020 CTAGTAGAAGATGTTCTCTGAATCAAC 57.485 37.037 8.63 0.00 42.40 3.18
3696 12202 7.901029 AGTAGAAGATGTTCTCTGAATCAACA 58.099 34.615 8.63 0.00 42.40 3.33
3698 12204 7.432350 AGAAGATGTTCTCTGAATCAACAAC 57.568 36.000 0.00 0.42 38.84 3.32
3699 12205 5.852738 AGATGTTCTCTGAATCAACAACG 57.147 39.130 1.88 0.00 33.84 4.10
3700 12206 5.541845 AGATGTTCTCTGAATCAACAACGA 58.458 37.500 0.00 0.00 33.84 3.85
3701 12207 5.991606 AGATGTTCTCTGAATCAACAACGAA 59.008 36.000 0.00 0.00 33.84 3.85
3712 12219 3.930618 TCAACAACGAACAACACGATTC 58.069 40.909 0.00 0.00 34.70 2.52
3713 12220 3.371285 TCAACAACGAACAACACGATTCA 59.629 39.130 0.00 0.00 34.70 2.57
3722 12229 4.771590 ACAACACGATTCAGCATTGATT 57.228 36.364 0.00 0.00 32.27 2.57
3739 12246 2.006888 GATTTGGAGGCGACGAATGAA 58.993 47.619 0.00 0.00 0.00 2.57
3741 12248 2.107950 TTGGAGGCGACGAATGAAAT 57.892 45.000 0.00 0.00 0.00 2.17
3742 12249 1.368641 TGGAGGCGACGAATGAAATG 58.631 50.000 0.00 0.00 0.00 2.32
3744 12251 2.006888 GGAGGCGACGAATGAAATGAA 58.993 47.619 0.00 0.00 0.00 2.57
3793 12323 7.118390 AGCTCTCAAACATGTGTAATTGTCTAC 59.882 37.037 0.00 0.00 0.00 2.59
3821 12351 3.680642 TGTAGTTCCACGTACTATCGC 57.319 47.619 0.28 0.00 31.31 4.58
3822 12352 2.030823 TGTAGTTCCACGTACTATCGCG 59.969 50.000 0.00 0.00 31.31 5.87
3836 12366 4.694339 ACTATCGCGATTTTTAGGCTTCT 58.306 39.130 28.81 0.30 0.00 2.85
3844 12374 5.861787 GCGATTTTTAGGCTTCTGCTTTTTA 59.138 36.000 0.00 0.00 39.59 1.52
3851 12381 9.606631 TTTTAGGCTTCTGCTTTTTATTTCAAA 57.393 25.926 0.00 0.00 39.59 2.69
3852 12382 9.606631 TTTAGGCTTCTGCTTTTTATTTCAAAA 57.393 25.926 0.00 0.00 39.59 2.44
3853 12383 9.606631 TTAGGCTTCTGCTTTTTATTTCAAAAA 57.393 25.926 0.00 0.00 39.59 1.94
3907 12437 0.713329 CACGCATTGATCAACGTCGA 59.287 50.000 23.68 0.00 36.45 4.20
3969 12500 7.673641 TTTTTATGCCACATAGGATTGGATT 57.326 32.000 0.00 0.00 41.22 3.01
3978 12509 2.978156 AGGATTGGATTGGTGTGTGT 57.022 45.000 0.00 0.00 0.00 3.72
4029 12560 4.063967 CACGCGGAGGTGCTGGTA 62.064 66.667 12.47 0.00 0.00 3.25
4068 12599 1.330521 CACCCACACGTCAGTTTTCAG 59.669 52.381 0.00 0.00 0.00 3.02
4092 12624 2.839098 CAGAGGGGCTGGTGTGTT 59.161 61.111 0.00 0.00 41.07 3.32
4096 12628 4.912395 GGGGCTGGTGTGTTGGCA 62.912 66.667 0.00 0.00 0.00 4.92
4102 12634 2.028203 GGCTGGTGTGTTGGCATTTATT 60.028 45.455 0.00 0.00 0.00 1.40
4137 12669 1.304547 CGTCTCCTCTCCCACACCT 60.305 63.158 0.00 0.00 0.00 4.00
4176 12709 1.960689 GTGTTTTGCAGGGTACATGGT 59.039 47.619 0.00 0.00 0.00 3.55
4182 12715 1.982226 TGCAGGGTACATGGTAACTGT 59.018 47.619 0.00 0.00 37.61 3.55
4192 12725 6.323225 GGTACATGGTAACTGTCCTAGTATGT 59.677 42.308 0.00 0.00 39.18 2.29
4280 12817 4.755123 ACATGACAACTGCCTAGTGTTTAC 59.245 41.667 0.00 0.00 37.19 2.01
4281 12818 3.735591 TGACAACTGCCTAGTGTTTACC 58.264 45.455 0.00 0.00 37.19 2.85
4303 12840 5.370880 ACCAGATGGCAACTCCTAAAGATAT 59.629 40.000 0.00 0.00 39.32 1.63
4343 12880 0.995024 CTCCTCTCCCACACCCAAAT 59.005 55.000 0.00 0.00 0.00 2.32
4384 12921 0.609131 GCAGGGTACATGGCAACTGT 60.609 55.000 0.00 0.00 37.61 3.55
4392 12929 2.546899 ACATGGCAACTGTCCCTAGTA 58.453 47.619 0.00 0.00 37.61 1.82
4425 12965 4.622695 GCAGATGGCAACTCTCTCTTTACT 60.623 45.833 0.00 0.00 43.97 2.24
4470 13013 3.367992 TTTGTTGTGCTACATGGCAAG 57.632 42.857 0.00 0.00 44.18 4.01
4565 13109 1.027357 AACAGCTGCAGTTGTCCAAG 58.973 50.000 32.48 9.08 38.55 3.61
4571 13115 2.294233 GCTGCAGTTGTCCAAGAAATGA 59.706 45.455 16.64 0.00 0.00 2.57
4591 13136 1.632409 ACATCTGGCACTTGACCTGAT 59.368 47.619 0.00 0.00 44.11 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.840666 TCTAGTCCTTGATCAGTTGGCTT 59.159 43.478 0.00 0.00 0.00 4.35
1 2 3.445008 TCTAGTCCTTGATCAGTTGGCT 58.555 45.455 0.00 0.00 0.00 4.75
4 5 5.047021 TCACCTTCTAGTCCTTGATCAGTTG 60.047 44.000 0.00 0.00 0.00 3.16
5 6 5.087323 TCACCTTCTAGTCCTTGATCAGTT 58.913 41.667 0.00 0.00 0.00 3.16
7 8 5.659463 CTTCACCTTCTAGTCCTTGATCAG 58.341 45.833 0.00 0.00 0.00 2.90
8 9 4.081420 GCTTCACCTTCTAGTCCTTGATCA 60.081 45.833 0.00 0.00 0.00 2.92
9 10 4.438148 GCTTCACCTTCTAGTCCTTGATC 58.562 47.826 0.00 0.00 0.00 2.92
10 11 3.118956 CGCTTCACCTTCTAGTCCTTGAT 60.119 47.826 0.00 0.00 0.00 2.57
11 12 2.231478 CGCTTCACCTTCTAGTCCTTGA 59.769 50.000 0.00 0.00 0.00 3.02
12 13 2.231478 TCGCTTCACCTTCTAGTCCTTG 59.769 50.000 0.00 0.00 0.00 3.61
13 14 2.494073 CTCGCTTCACCTTCTAGTCCTT 59.506 50.000 0.00 0.00 0.00 3.36
14 15 2.096248 CTCGCTTCACCTTCTAGTCCT 58.904 52.381 0.00 0.00 0.00 3.85
15 16 1.819903 ACTCGCTTCACCTTCTAGTCC 59.180 52.381 0.00 0.00 0.00 3.85
17 18 1.469308 CGACTCGCTTCACCTTCTAGT 59.531 52.381 0.00 0.00 0.00 2.57
19 20 1.467734 GTCGACTCGCTTCACCTTCTA 59.532 52.381 8.70 0.00 0.00 2.10
20 21 0.241481 GTCGACTCGCTTCACCTTCT 59.759 55.000 8.70 0.00 0.00 2.85
21 22 1.066114 CGTCGACTCGCTTCACCTTC 61.066 60.000 14.70 0.00 0.00 3.46
22 23 1.081376 CGTCGACTCGCTTCACCTT 60.081 57.895 14.70 0.00 0.00 3.50
23 24 1.964891 TCGTCGACTCGCTTCACCT 60.965 57.895 14.70 0.00 0.00 4.00
24 25 1.796749 GTCGTCGACTCGCTTCACC 60.797 63.158 18.09 0.00 0.00 4.02
25 26 1.796749 GGTCGTCGACTCGCTTCAC 60.797 63.158 23.69 1.99 32.47 3.18
26 27 1.964891 AGGTCGTCGACTCGCTTCA 60.965 57.895 23.69 0.00 32.47 3.02
27 28 1.512310 CAGGTCGTCGACTCGCTTC 60.512 63.158 23.69 7.11 32.47 3.86
29 30 4.104417 GCAGGTCGTCGACTCGCT 62.104 66.667 23.69 10.69 32.47 4.93
31 32 3.733960 TGGCAGGTCGTCGACTCG 61.734 66.667 23.69 15.90 32.47 4.18
32 33 1.303799 TAGTGGCAGGTCGTCGACTC 61.304 60.000 23.69 14.24 32.47 3.36
33 34 0.680280 ATAGTGGCAGGTCGTCGACT 60.680 55.000 23.69 8.26 32.47 4.18
34 35 0.525668 CATAGTGGCAGGTCGTCGAC 60.526 60.000 17.16 17.16 0.00 4.20
37 38 2.380084 TTTCATAGTGGCAGGTCGTC 57.620 50.000 0.00 0.00 0.00 4.20
38 39 2.236146 TGATTTCATAGTGGCAGGTCGT 59.764 45.455 0.00 0.00 0.00 4.34
39 40 2.905075 TGATTTCATAGTGGCAGGTCG 58.095 47.619 0.00 0.00 0.00 4.79
40 41 4.454678 TGATGATTTCATAGTGGCAGGTC 58.545 43.478 0.00 0.00 36.57 3.85
41 42 4.508551 TGATGATTTCATAGTGGCAGGT 57.491 40.909 0.00 0.00 36.57 4.00
42 43 5.533528 TGATTGATGATTTCATAGTGGCAGG 59.466 40.000 0.00 0.00 36.57 4.85
44 45 7.430441 CATTGATTGATGATTTCATAGTGGCA 58.570 34.615 0.00 0.00 36.57 4.92
45 46 6.365247 GCATTGATTGATGATTTCATAGTGGC 59.635 38.462 0.00 0.00 36.57 5.01
46 47 7.430441 TGCATTGATTGATGATTTCATAGTGG 58.570 34.615 0.00 0.00 36.57 4.00
47 48 8.865590 TTGCATTGATTGATGATTTCATAGTG 57.134 30.769 0.00 0.00 36.57 2.74
48 49 9.692749 GATTGCATTGATTGATGATTTCATAGT 57.307 29.630 0.00 0.00 36.57 2.12
49 50 9.914131 AGATTGCATTGATTGATGATTTCATAG 57.086 29.630 0.00 0.00 36.57 2.23
51 52 9.914131 CTAGATTGCATTGATTGATGATTTCAT 57.086 29.630 0.00 0.00 39.70 2.57
54 55 7.152645 GGCTAGATTGCATTGATTGATGATTT 58.847 34.615 0.00 0.00 34.04 2.17
55 56 6.569801 CGGCTAGATTGCATTGATTGATGATT 60.570 38.462 0.00 0.00 34.04 2.57
57 58 4.214758 CGGCTAGATTGCATTGATTGATGA 59.785 41.667 0.00 0.00 34.04 2.92
59 60 4.392047 TCGGCTAGATTGCATTGATTGAT 58.608 39.130 0.00 0.00 34.04 2.57
60 61 3.807553 TCGGCTAGATTGCATTGATTGA 58.192 40.909 0.00 0.00 34.04 2.57
61 62 3.608707 GCTCGGCTAGATTGCATTGATTG 60.609 47.826 0.00 0.00 34.04 2.67
62 63 2.551459 GCTCGGCTAGATTGCATTGATT 59.449 45.455 0.00 0.00 34.04 2.57
63 64 2.149578 GCTCGGCTAGATTGCATTGAT 58.850 47.619 0.00 0.00 34.04 2.57
66 67 1.415659 AGAGCTCGGCTAGATTGCATT 59.584 47.619 8.37 0.00 39.88 3.56
67 68 1.047002 AGAGCTCGGCTAGATTGCAT 58.953 50.000 8.37 0.00 39.88 3.96
68 69 0.103755 CAGAGCTCGGCTAGATTGCA 59.896 55.000 8.37 0.00 39.88 4.08
69 70 0.103937 ACAGAGCTCGGCTAGATTGC 59.896 55.000 14.20 0.00 39.88 3.56
70 71 1.269517 GGACAGAGCTCGGCTAGATTG 60.270 57.143 14.20 3.78 39.88 2.67
71 72 1.036707 GGACAGAGCTCGGCTAGATT 58.963 55.000 14.20 0.00 39.88 2.40
73 74 0.749818 CAGGACAGAGCTCGGCTAGA 60.750 60.000 14.20 0.00 39.88 2.43
74 75 1.732917 CAGGACAGAGCTCGGCTAG 59.267 63.158 14.20 2.94 39.88 3.42
75 76 1.754621 CCAGGACAGAGCTCGGCTA 60.755 63.158 14.20 0.00 39.88 3.93
76 77 2.500815 TACCAGGACAGAGCTCGGCT 62.501 60.000 14.20 0.84 43.88 5.52
79 80 1.315981 TGCTACCAGGACAGAGCTCG 61.316 60.000 8.37 6.04 35.89 5.03
81 82 1.261238 GGTGCTACCAGGACAGAGCT 61.261 60.000 0.00 0.00 38.40 4.09
84 85 4.966247 TGGTGCTACCAGGACAGA 57.034 55.556 0.00 0.00 44.79 3.41
98 99 2.851195 CAACCTTGACTAAGCAGTGGT 58.149 47.619 0.00 0.00 34.21 4.16
99 100 1.537202 GCAACCTTGACTAAGCAGTGG 59.463 52.381 0.00 0.00 34.21 4.00
100 101 2.221169 TGCAACCTTGACTAAGCAGTG 58.779 47.619 0.00 0.00 34.21 3.66
101 102 2.498167 CTGCAACCTTGACTAAGCAGT 58.502 47.619 0.00 0.00 43.16 4.40
102 103 1.808945 CCTGCAACCTTGACTAAGCAG 59.191 52.381 0.00 0.00 46.55 4.24
104 105 2.079925 CTCCTGCAACCTTGACTAAGC 58.920 52.381 0.00 0.00 32.40 3.09
107 108 0.324943 GCCTCCTGCAACCTTGACTA 59.675 55.000 0.00 0.00 40.77 2.59
108 109 1.073897 GCCTCCTGCAACCTTGACT 59.926 57.895 0.00 0.00 40.77 3.41
110 111 2.032528 CGCCTCCTGCAACCTTGA 59.967 61.111 0.00 0.00 41.33 3.02
111 112 3.058160 CCGCCTCCTGCAACCTTG 61.058 66.667 0.00 0.00 41.33 3.61
119 120 4.147449 TCATCGTGCCGCCTCCTG 62.147 66.667 0.00 0.00 0.00 3.86
120 121 3.842923 CTCATCGTGCCGCCTCCT 61.843 66.667 0.00 0.00 0.00 3.69
121 122 4.148825 ACTCATCGTGCCGCCTCC 62.149 66.667 0.00 0.00 0.00 4.30
123 124 3.381983 TGACTCATCGTGCCGCCT 61.382 61.111 0.00 0.00 0.00 5.52
125 126 2.432456 TGTGACTCATCGTGCCGC 60.432 61.111 0.00 0.00 0.00 6.53
127 128 2.730672 GCGTGTGACTCATCGTGCC 61.731 63.158 7.89 0.00 0.00 5.01
129 130 1.073216 GGAGCGTGTGACTCATCGTG 61.073 60.000 7.89 0.00 35.79 4.35
132 133 1.134995 TCATGGAGCGTGTGACTCATC 60.135 52.381 0.00 0.00 35.79 2.92
133 134 0.897621 TCATGGAGCGTGTGACTCAT 59.102 50.000 0.00 0.00 35.79 2.90
134 135 0.038251 GTCATGGAGCGTGTGACTCA 60.038 55.000 0.00 0.00 39.24 3.41
135 136 0.038251 TGTCATGGAGCGTGTGACTC 60.038 55.000 13.10 0.00 42.03 3.36
137 138 0.319900 ACTGTCATGGAGCGTGTGAC 60.320 55.000 0.00 7.37 41.90 3.67
138 139 0.038251 GACTGTCATGGAGCGTGTGA 60.038 55.000 2.24 0.00 0.00 3.58
139 140 0.037882 AGACTGTCATGGAGCGTGTG 60.038 55.000 10.88 0.00 0.00 3.82
140 141 0.681733 AAGACTGTCATGGAGCGTGT 59.318 50.000 10.88 0.00 0.00 4.49
141 142 1.354040 GAAGACTGTCATGGAGCGTG 58.646 55.000 10.88 0.00 0.00 5.34
142 143 0.109086 CGAAGACTGTCATGGAGCGT 60.109 55.000 10.88 0.00 0.00 5.07
143 144 0.109086 ACGAAGACTGTCATGGAGCG 60.109 55.000 10.88 6.52 0.00 5.03
144 145 2.086054 AACGAAGACTGTCATGGAGC 57.914 50.000 10.88 0.00 0.00 4.70
175 176 6.742718 ACGAAAACGAAATGATTGATGTGATC 59.257 34.615 0.00 0.00 0.00 2.92
176 177 6.524239 CACGAAAACGAAATGATTGATGTGAT 59.476 34.615 0.00 0.00 0.00 3.06
177 178 5.850653 CACGAAAACGAAATGATTGATGTGA 59.149 36.000 0.00 0.00 0.00 3.58
178 179 5.624900 ACACGAAAACGAAATGATTGATGTG 59.375 36.000 0.00 0.00 0.00 3.21
179 180 5.757886 ACACGAAAACGAAATGATTGATGT 58.242 33.333 0.00 0.00 0.00 3.06
180 181 6.674005 AACACGAAAACGAAATGATTGATG 57.326 33.333 0.00 0.00 0.00 3.07
181 182 7.692908 AAAACACGAAAACGAAATGATTGAT 57.307 28.000 0.00 0.00 0.00 2.57
184 185 7.284518 ACAAAAACACGAAAACGAAATGATT 57.715 28.000 0.00 0.00 0.00 2.57
185 186 6.879188 ACAAAAACACGAAAACGAAATGAT 57.121 29.167 0.00 0.00 0.00 2.45
186 187 6.692232 AACAAAAACACGAAAACGAAATGA 57.308 29.167 0.00 0.00 0.00 2.57
187 188 7.753317 AAAACAAAAACACGAAAACGAAATG 57.247 28.000 0.00 0.00 0.00 2.32
188 189 7.149272 GCAAAAACAAAAACACGAAAACGAAAT 60.149 29.630 0.00 0.00 0.00 2.17
189 190 6.138702 GCAAAAACAAAAACACGAAAACGAAA 59.861 30.769 0.00 0.00 0.00 3.46
190 191 5.615982 GCAAAAACAAAAACACGAAAACGAA 59.384 32.000 0.00 0.00 0.00 3.85
191 192 5.050972 AGCAAAAACAAAAACACGAAAACGA 60.051 32.000 0.00 0.00 0.00 3.85
192 193 5.133952 AGCAAAAACAAAAACACGAAAACG 58.866 33.333 0.00 0.00 0.00 3.60
193 194 6.961358 AAGCAAAAACAAAAACACGAAAAC 57.039 29.167 0.00 0.00 0.00 2.43
194 195 7.097409 CGAAAAGCAAAAACAAAAACACGAAAA 60.097 29.630 0.00 0.00 0.00 2.29
196 197 5.841296 CGAAAAGCAAAAACAAAAACACGAA 59.159 32.000 0.00 0.00 0.00 3.85
197 198 5.050972 ACGAAAAGCAAAAACAAAAACACGA 60.051 32.000 0.00 0.00 0.00 4.35
198 199 5.056211 CACGAAAAGCAAAAACAAAAACACG 59.944 36.000 0.00 0.00 0.00 4.49
199 200 5.338297 CCACGAAAAGCAAAAACAAAAACAC 59.662 36.000 0.00 0.00 0.00 3.32
200 201 5.444122 CCACGAAAAGCAAAAACAAAAACA 58.556 33.333 0.00 0.00 0.00 2.83
201 202 4.848841 CCCACGAAAAGCAAAAACAAAAAC 59.151 37.500 0.00 0.00 0.00 2.43
202 203 4.755123 TCCCACGAAAAGCAAAAACAAAAA 59.245 33.333 0.00 0.00 0.00 1.94
204 205 3.926616 TCCCACGAAAAGCAAAAACAAA 58.073 36.364 0.00 0.00 0.00 2.83
205 206 3.594603 TCCCACGAAAAGCAAAAACAA 57.405 38.095 0.00 0.00 0.00 2.83
206 207 3.594603 TTCCCACGAAAAGCAAAAACA 57.405 38.095 0.00 0.00 0.00 2.83
209 210 3.304794 CGGTATTCCCACGAAAAGCAAAA 60.305 43.478 0.00 0.00 0.00 2.44
210 211 2.226912 CGGTATTCCCACGAAAAGCAAA 59.773 45.455 0.00 0.00 0.00 3.68
212 213 1.270947 ACGGTATTCCCACGAAAAGCA 60.271 47.619 0.00 0.00 0.00 3.91
213 214 1.445871 ACGGTATTCCCACGAAAAGC 58.554 50.000 0.00 0.00 0.00 3.51
214 215 2.413634 GCAACGGTATTCCCACGAAAAG 60.414 50.000 0.00 0.00 0.00 2.27
215 216 1.536331 GCAACGGTATTCCCACGAAAA 59.464 47.619 0.00 0.00 0.00 2.29
217 218 0.035036 TGCAACGGTATTCCCACGAA 59.965 50.000 0.00 0.00 0.00 3.85
218 219 0.671163 GTGCAACGGTATTCCCACGA 60.671 55.000 0.00 0.00 0.00 4.35
219 220 0.951525 TGTGCAACGGTATTCCCACG 60.952 55.000 0.00 0.00 42.39 4.94
220 221 1.400494 GATGTGCAACGGTATTCCCAC 59.600 52.381 0.00 0.00 42.39 4.61
221 222 1.280710 AGATGTGCAACGGTATTCCCA 59.719 47.619 0.00 0.00 42.39 4.37
223 224 4.034048 CACTTAGATGTGCAACGGTATTCC 59.966 45.833 0.00 0.00 42.39 3.01
224 225 4.868171 TCACTTAGATGTGCAACGGTATTC 59.132 41.667 0.00 0.00 42.39 1.75
225 226 4.827692 TCACTTAGATGTGCAACGGTATT 58.172 39.130 0.00 0.00 42.39 1.89
226 227 4.081642 ACTCACTTAGATGTGCAACGGTAT 60.082 41.667 0.00 0.00 42.39 2.73
228 229 2.037251 ACTCACTTAGATGTGCAACGGT 59.963 45.455 0.00 0.00 42.39 4.83
229 230 2.413112 CACTCACTTAGATGTGCAACGG 59.587 50.000 0.00 0.00 42.39 4.44
230 231 2.413112 CCACTCACTTAGATGTGCAACG 59.587 50.000 0.00 0.00 42.39 4.10
232 233 4.020307 TGATCCACTCACTTAGATGTGCAA 60.020 41.667 0.00 0.00 37.81 4.08
233 234 3.515104 TGATCCACTCACTTAGATGTGCA 59.485 43.478 0.00 0.00 37.81 4.57
234 235 4.128925 TGATCCACTCACTTAGATGTGC 57.871 45.455 0.00 0.00 37.81 4.57
235 236 4.569966 GCTTGATCCACTCACTTAGATGTG 59.430 45.833 0.00 0.00 39.15 3.21
236 237 4.223700 TGCTTGATCCACTCACTTAGATGT 59.776 41.667 0.00 0.00 32.17 3.06
237 238 4.763073 TGCTTGATCCACTCACTTAGATG 58.237 43.478 0.00 0.00 32.17 2.90
238 239 5.627182 ATGCTTGATCCACTCACTTAGAT 57.373 39.130 0.00 0.00 32.17 1.98
240 241 7.615582 TTTTATGCTTGATCCACTCACTTAG 57.384 36.000 0.00 0.00 32.17 2.18
242 243 6.071728 CCTTTTTATGCTTGATCCACTCACTT 60.072 38.462 0.00 0.00 32.17 3.16
244 245 5.415701 TCCTTTTTATGCTTGATCCACTCAC 59.584 40.000 0.00 0.00 32.17 3.51
247 248 5.819991 TCTCCTTTTTATGCTTGATCCACT 58.180 37.500 0.00 0.00 0.00 4.00
248 249 6.515272 TTCTCCTTTTTATGCTTGATCCAC 57.485 37.500 0.00 0.00 0.00 4.02
250 251 6.378280 TCCTTTCTCCTTTTTATGCTTGATCC 59.622 38.462 0.00 0.00 0.00 3.36
251 252 7.396540 TCCTTTCTCCTTTTTATGCTTGATC 57.603 36.000 0.00 0.00 0.00 2.92
252 253 7.781324 TTCCTTTCTCCTTTTTATGCTTGAT 57.219 32.000 0.00 0.00 0.00 2.57
253 254 7.595819 TTTCCTTTCTCCTTTTTATGCTTGA 57.404 32.000 0.00 0.00 0.00 3.02
255 256 8.250143 TCTTTTCCTTTCTCCTTTTTATGCTT 57.750 30.769 0.00 0.00 0.00 3.91
256 257 7.839680 TCTTTTCCTTTCTCCTTTTTATGCT 57.160 32.000 0.00 0.00 0.00 3.79
260 261 9.869757 CTTTGTTCTTTTCCTTTCTCCTTTTTA 57.130 29.630 0.00 0.00 0.00 1.52
261 262 8.593679 TCTTTGTTCTTTTCCTTTCTCCTTTTT 58.406 29.630 0.00 0.00 0.00 1.94
262 263 8.134202 TCTTTGTTCTTTTCCTTTCTCCTTTT 57.866 30.769 0.00 0.00 0.00 2.27
263 264 7.718334 TCTTTGTTCTTTTCCTTTCTCCTTT 57.282 32.000 0.00 0.00 0.00 3.11
264 265 7.718334 TTCTTTGTTCTTTTCCTTTCTCCTT 57.282 32.000 0.00 0.00 0.00 3.36
265 266 7.718334 TTTCTTTGTTCTTTTCCTTTCTCCT 57.282 32.000 0.00 0.00 0.00 3.69
266 267 8.948631 ATTTTCTTTGTTCTTTTCCTTTCTCC 57.051 30.769 0.00 0.00 0.00 3.71
271 272 9.764363 GTGGATATTTTCTTTGTTCTTTTCCTT 57.236 29.630 0.00 0.00 0.00 3.36
272 273 8.923270 TGTGGATATTTTCTTTGTTCTTTTCCT 58.077 29.630 0.00 0.00 0.00 3.36
273 274 9.710900 ATGTGGATATTTTCTTTGTTCTTTTCC 57.289 29.630 0.00 0.00 0.00 3.13
282 283 9.229784 CGAAGATTCATGTGGATATTTTCTTTG 57.770 33.333 0.00 0.00 0.00 2.77
283 284 7.917505 GCGAAGATTCATGTGGATATTTTCTTT 59.082 33.333 0.00 0.00 0.00 2.52
284 285 7.420800 GCGAAGATTCATGTGGATATTTTCTT 58.579 34.615 0.00 0.00 0.00 2.52
285 286 6.293081 CGCGAAGATTCATGTGGATATTTTCT 60.293 38.462 0.00 0.00 0.00 2.52
286 287 5.848036 CGCGAAGATTCATGTGGATATTTTC 59.152 40.000 0.00 0.00 0.00 2.29
287 288 5.296780 ACGCGAAGATTCATGTGGATATTTT 59.703 36.000 15.93 0.00 0.00 1.82
290 291 3.995199 ACGCGAAGATTCATGTGGATAT 58.005 40.909 15.93 0.00 0.00 1.63
291 292 3.452755 ACGCGAAGATTCATGTGGATA 57.547 42.857 15.93 0.00 0.00 2.59
292 293 2.315925 ACGCGAAGATTCATGTGGAT 57.684 45.000 15.93 0.00 0.00 3.41
304 305 8.454293 AAGTATATCATTGATCTTACGCGAAG 57.546 34.615 15.93 12.57 36.38 3.79
305 306 7.541091 GGAAGTATATCATTGATCTTACGCGAA 59.459 37.037 15.93 1.35 0.00 4.70
306 307 7.027760 GGAAGTATATCATTGATCTTACGCGA 58.972 38.462 15.93 0.00 0.00 5.87
309 310 7.698550 CGGAGGAAGTATATCATTGATCTTACG 59.301 40.741 1.55 0.00 0.00 3.18
310 311 8.524487 ACGGAGGAAGTATATCATTGATCTTAC 58.476 37.037 1.55 6.94 0.00 2.34
311 312 8.651589 ACGGAGGAAGTATATCATTGATCTTA 57.348 34.615 1.55 0.00 0.00 2.10
312 313 7.546250 ACGGAGGAAGTATATCATTGATCTT 57.454 36.000 1.55 0.70 0.00 2.40
315 316 7.967908 AGAAACGGAGGAAGTATATCATTGAT 58.032 34.615 4.28 4.28 0.00 2.57
316 317 7.361457 AGAAACGGAGGAAGTATATCATTGA 57.639 36.000 0.00 0.00 0.00 2.57
319 320 9.712305 CATTTAGAAACGGAGGAAGTATATCAT 57.288 33.333 0.00 0.00 0.00 2.45
320 321 8.701895 ACATTTAGAAACGGAGGAAGTATATCA 58.298 33.333 0.00 0.00 0.00 2.15
324 325 8.537858 ACTTACATTTAGAAACGGAGGAAGTAT 58.462 33.333 0.00 0.00 0.00 2.12
326 327 6.766429 ACTTACATTTAGAAACGGAGGAAGT 58.234 36.000 0.00 0.00 0.00 3.01
327 328 7.097834 AGACTTACATTTAGAAACGGAGGAAG 58.902 38.462 0.00 0.00 0.00 3.46
328 329 7.001099 AGACTTACATTTAGAAACGGAGGAA 57.999 36.000 0.00 0.00 0.00 3.36
329 330 6.600882 AGACTTACATTTAGAAACGGAGGA 57.399 37.500 0.00 0.00 0.00 3.71
330 331 7.668525 AAAGACTTACATTTAGAAACGGAGG 57.331 36.000 0.00 0.00 0.00 4.30
356 357 9.000486 CGTATGTAGTCCATAGTGAAATCTCTA 58.000 37.037 0.00 0.00 36.71 2.43
358 359 7.040617 TCCGTATGTAGTCCATAGTGAAATCTC 60.041 40.741 0.00 0.00 36.71 2.75
359 360 6.776116 TCCGTATGTAGTCCATAGTGAAATCT 59.224 38.462 0.00 0.00 36.71 2.40
360 361 6.978338 TCCGTATGTAGTCCATAGTGAAATC 58.022 40.000 0.00 0.00 36.71 2.17
361 362 6.971726 TCCGTATGTAGTCCATAGTGAAAT 57.028 37.500 0.00 0.00 36.71 2.17
362 363 6.778834 TTCCGTATGTAGTCCATAGTGAAA 57.221 37.500 0.00 0.00 36.71 2.69
363 364 6.548251 TCATTCCGTATGTAGTCCATAGTGAA 59.452 38.462 0.00 0.00 36.71 3.18
364 365 6.066032 TCATTCCGTATGTAGTCCATAGTGA 58.934 40.000 0.00 0.00 36.71 3.41
366 367 6.971726 TTCATTCCGTATGTAGTCCATAGT 57.028 37.500 0.00 0.00 36.71 2.12
367 368 8.088365 TCATTTCATTCCGTATGTAGTCCATAG 58.912 37.037 0.00 0.00 36.71 2.23
368 369 7.958088 TCATTTCATTCCGTATGTAGTCCATA 58.042 34.615 0.00 0.00 35.64 2.74
370 371 6.228616 TCATTTCATTCCGTATGTAGTCCA 57.771 37.500 0.00 0.00 35.64 4.02
371 372 5.696724 CCTCATTTCATTCCGTATGTAGTCC 59.303 44.000 0.00 0.00 35.64 3.85
372 373 5.696724 CCCTCATTTCATTCCGTATGTAGTC 59.303 44.000 0.00 0.00 35.64 2.59
373 374 5.365605 TCCCTCATTTCATTCCGTATGTAGT 59.634 40.000 0.00 0.00 35.64 2.73
375 376 5.880164 TCCCTCATTTCATTCCGTATGTA 57.120 39.130 0.00 0.00 35.64 2.29
376 377 4.771114 TCCCTCATTTCATTCCGTATGT 57.229 40.909 0.00 0.00 35.64 2.29
379 380 5.630415 AGATTCCCTCATTTCATTCCGTA 57.370 39.130 0.00 0.00 0.00 4.02
380 381 4.510167 AGATTCCCTCATTTCATTCCGT 57.490 40.909 0.00 0.00 0.00 4.69
381 382 5.237344 GTGTAGATTCCCTCATTTCATTCCG 59.763 44.000 0.00 0.00 0.00 4.30
382 383 6.360618 AGTGTAGATTCCCTCATTTCATTCC 58.639 40.000 0.00 0.00 0.00 3.01
384 385 6.962182 TGAGTGTAGATTCCCTCATTTCATT 58.038 36.000 0.00 0.00 0.00 2.57
385 386 6.566079 TGAGTGTAGATTCCCTCATTTCAT 57.434 37.500 0.00 0.00 0.00 2.57
386 387 6.373005 TTGAGTGTAGATTCCCTCATTTCA 57.627 37.500 0.00 0.00 34.19 2.69
387 388 7.687941 TTTTGAGTGTAGATTCCCTCATTTC 57.312 36.000 0.00 0.00 34.19 2.17
391 392 4.943705 GCATTTTGAGTGTAGATTCCCTCA 59.056 41.667 0.00 0.00 32.38 3.86
392 393 4.943705 TGCATTTTGAGTGTAGATTCCCTC 59.056 41.667 0.00 0.00 0.00 4.30
402 403 9.224267 GGATGTATATAGATGCATTTTGAGTGT 57.776 33.333 0.00 0.00 38.38 3.55
403 404 8.385858 CGGATGTATATAGATGCATTTTGAGTG 58.614 37.037 11.19 0.00 38.38 3.51
404 405 8.097038 ACGGATGTATATAGATGCATTTTGAGT 58.903 33.333 11.19 0.00 38.38 3.41
405 406 8.484641 ACGGATGTATATAGATGCATTTTGAG 57.515 34.615 11.19 0.00 38.38 3.02
408 409 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
409 410 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
410 411 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
412 413 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
414 415 8.466798 TGAACCACATACGGATGTATATAGATG 58.533 37.037 14.23 0.00 44.82 2.90
415 416 8.589701 TGAACCACATACGGATGTATATAGAT 57.410 34.615 14.23 0.00 44.82 1.98
419 420 9.599866 CATTATGAACCACATACGGATGTATAT 57.400 33.333 14.23 1.68 44.82 0.86
420 421 8.808092 TCATTATGAACCACATACGGATGTATA 58.192 33.333 14.23 4.47 44.82 1.47
421 422 7.676004 TCATTATGAACCACATACGGATGTAT 58.324 34.615 14.23 5.54 44.82 2.29
422 423 7.056844 TCATTATGAACCACATACGGATGTA 57.943 36.000 14.23 0.00 44.82 2.29
424 425 6.859420 TTCATTATGAACCACATACGGATG 57.141 37.500 5.94 5.94 40.62 3.51
425 426 7.939039 AGATTTCATTATGAACCACATACGGAT 59.061 33.333 7.19 0.00 40.62 4.18
426 427 7.279615 AGATTTCATTATGAACCACATACGGA 58.720 34.615 7.19 0.00 40.62 4.69
427 428 7.442364 AGAGATTTCATTATGAACCACATACGG 59.558 37.037 7.19 0.00 40.62 4.02
428 429 8.370493 AGAGATTTCATTATGAACCACATACG 57.630 34.615 7.19 0.00 40.62 3.06
457 458 8.855804 TCCCTCTGTTCCTAAATATAAGTCTT 57.144 34.615 0.00 0.00 0.00 3.01
458 459 8.068733 ACTCCCTCTGTTCCTAAATATAAGTCT 58.931 37.037 0.00 0.00 0.00 3.24
459 460 8.252624 ACTCCCTCTGTTCCTAAATATAAGTC 57.747 38.462 0.00 0.00 0.00 3.01
460 461 9.369672 CTACTCCCTCTGTTCCTAAATATAAGT 57.630 37.037 0.00 0.00 0.00 2.24
461 462 8.808092 CCTACTCCCTCTGTTCCTAAATATAAG 58.192 40.741 0.00 0.00 0.00 1.73
462 463 8.517047 TCCTACTCCCTCTGTTCCTAAATATAA 58.483 37.037 0.00 0.00 0.00 0.98
463 464 8.065385 TCCTACTCCCTCTGTTCCTAAATATA 57.935 38.462 0.00 0.00 0.00 0.86
464 465 6.935036 TCCTACTCCCTCTGTTCCTAAATAT 58.065 40.000 0.00 0.00 0.00 1.28
466 467 5.222278 TCCTACTCCCTCTGTTCCTAAAT 57.778 43.478 0.00 0.00 0.00 1.40
467 468 4.687262 TCCTACTCCCTCTGTTCCTAAA 57.313 45.455 0.00 0.00 0.00 1.85
468 469 4.901785 ATCCTACTCCCTCTGTTCCTAA 57.098 45.455 0.00 0.00 0.00 2.69
469 470 4.901785 AATCCTACTCCCTCTGTTCCTA 57.098 45.455 0.00 0.00 0.00 2.94
470 471 3.786213 AATCCTACTCCCTCTGTTCCT 57.214 47.619 0.00 0.00 0.00 3.36
472 473 6.325286 ACATCTAAATCCTACTCCCTCTGTTC 59.675 42.308 0.00 0.00 0.00 3.18
473 474 6.098982 CACATCTAAATCCTACTCCCTCTGTT 59.901 42.308 0.00 0.00 0.00 3.16
474 475 5.600484 CACATCTAAATCCTACTCCCTCTGT 59.400 44.000 0.00 0.00 0.00 3.41
475 476 5.510520 GCACATCTAAATCCTACTCCCTCTG 60.511 48.000 0.00 0.00 0.00 3.35
476 477 4.591072 GCACATCTAAATCCTACTCCCTCT 59.409 45.833 0.00 0.00 0.00 3.69
478 479 4.298626 TGCACATCTAAATCCTACTCCCT 58.701 43.478 0.00 0.00 0.00 4.20
479 480 4.689612 TGCACATCTAAATCCTACTCCC 57.310 45.455 0.00 0.00 0.00 4.30
481 482 8.894768 AAGTATTGCACATCTAAATCCTACTC 57.105 34.615 0.00 0.00 0.00 2.59
484 485 9.725019 CCATAAGTATTGCACATCTAAATCCTA 57.275 33.333 0.00 0.00 0.00 2.94
485 486 7.175641 GCCATAAGTATTGCACATCTAAATCCT 59.824 37.037 0.00 0.00 0.00 3.24
486 487 7.040478 TGCCATAAGTATTGCACATCTAAATCC 60.040 37.037 0.00 0.00 30.49 3.01
487 488 7.874940 TGCCATAAGTATTGCACATCTAAATC 58.125 34.615 0.00 0.00 30.49 2.17
488 489 7.822161 TGCCATAAGTATTGCACATCTAAAT 57.178 32.000 0.00 0.00 30.49 1.40
497 498 7.285172 ACATCTAAATGTGCCATAAGTATTGCA 59.715 33.333 0.00 0.00 44.51 4.08
498 499 7.651808 ACATCTAAATGTGCCATAAGTATTGC 58.348 34.615 0.00 0.00 44.51 3.56
520 521 7.843083 TGTTACAACAGTTTTGCTAAAGCACAT 60.843 33.333 3.66 0.00 41.60 3.21
521 522 6.570571 TGTTACAACAGTTTTGCTAAAGCACA 60.571 34.615 3.66 0.00 41.60 4.57
523 524 5.955488 TGTTACAACAGTTTTGCTAAAGCA 58.045 33.333 0.00 0.00 40.83 3.91
524 525 6.879188 TTGTTACAACAGTTTTGCTAAAGC 57.121 33.333 0.00 0.00 40.50 3.51
525 526 8.682128 TCTTTGTTACAACAGTTTTGCTAAAG 57.318 30.769 0.00 0.00 40.50 1.85
527 528 8.082852 TGTTCTTTGTTACAACAGTTTTGCTAA 58.917 29.630 0.00 0.00 40.50 3.09
528 529 7.594714 TGTTCTTTGTTACAACAGTTTTGCTA 58.405 30.769 0.00 0.00 40.50 3.49
529 530 6.451393 TGTTCTTTGTTACAACAGTTTTGCT 58.549 32.000 0.00 0.00 40.50 3.91
532 533 9.482627 TGAATTGTTCTTTGTTACAACAGTTTT 57.517 25.926 0.00 0.00 40.50 2.43
622 630 7.723172 GGATATTTTTCTCACTCCTGGATGATT 59.277 37.037 0.00 0.00 0.00 2.57
635 643 7.288852 TGGTTGTTTTCCTGGATATTTTTCTCA 59.711 33.333 0.00 0.00 0.00 3.27
660 668 2.740981 CAGCTGAAAAGTACTCCTGCTG 59.259 50.000 23.57 23.57 40.17 4.41
661 669 2.634940 TCAGCTGAAAAGTACTCCTGCT 59.365 45.455 15.67 14.21 0.00 4.24
663 671 5.240891 TCATTCAGCTGAAAAGTACTCCTG 58.759 41.667 31.55 20.95 37.61 3.86
664 672 5.489792 TCATTCAGCTGAAAAGTACTCCT 57.510 39.130 31.55 10.30 37.61 3.69
665 673 6.372659 TCATTCATTCAGCTGAAAAGTACTCC 59.627 38.462 31.55 0.00 38.55 3.85
666 674 7.118971 ACTCATTCATTCAGCTGAAAAGTACTC 59.881 37.037 31.55 0.00 38.55 2.59
667 675 6.939163 ACTCATTCATTCAGCTGAAAAGTACT 59.061 34.615 31.55 12.57 38.55 2.73
689 697 2.676839 CACTCATCATCAAGTGGCACTC 59.323 50.000 22.31 0.00 39.36 3.51
690 698 2.708051 CACTCATCATCAAGTGGCACT 58.292 47.619 15.88 15.88 39.36 4.40
705 716 2.638325 TCCTGTTAATTCCCCCACTCA 58.362 47.619 0.00 0.00 0.00 3.41
712 3817 6.316140 GCCATTGAAAATTCCTGTTAATTCCC 59.684 38.462 0.00 0.00 0.00 3.97
722 3827 3.845398 TGATTGGGCCATTGAAAATTCCT 59.155 39.130 7.26 0.00 0.00 3.36
774 3919 2.282887 GGGATTGGTGTGCCCGTT 60.283 61.111 0.00 0.00 35.15 4.44
799 3944 3.667476 TTGGCAGGTGGACAAGGA 58.333 55.556 0.00 0.00 40.44 3.36
803 3948 2.170166 GAATGAATTGGCAGGTGGACA 58.830 47.619 0.00 0.00 0.00 4.02
804 3949 1.478105 GGAATGAATTGGCAGGTGGAC 59.522 52.381 0.00 0.00 0.00 4.02
1123 4301 1.752833 GGTTGTCTGACGGGAAGGT 59.247 57.895 2.98 0.00 0.00 3.50
1567 4800 3.730761 GCCGTTCCACAGCAGCTG 61.731 66.667 21.54 21.54 37.52 4.24
1610 4843 1.532316 AAGTCGTCGTTCCCCAGGA 60.532 57.895 0.00 0.00 0.00 3.86
1612 4845 1.374252 CCAAGTCGTCGTTCCCCAG 60.374 63.158 0.00 0.00 0.00 4.45
1697 4930 1.444553 CAGAGCGTGTCGTTCTCCC 60.445 63.158 5.63 0.00 43.31 4.30
1738 4971 4.893601 GGCGCCGAAGAGGTAGGC 62.894 72.222 12.58 0.00 46.88 3.93
1801 5037 2.593436 CCTTGTGTTCGGCGGGTT 60.593 61.111 7.21 0.00 0.00 4.11
1807 5043 1.302511 CCACCTCCCTTGTGTTCGG 60.303 63.158 0.00 0.00 31.71 4.30
1827 5069 2.567497 CCTGTACACCACGTCCGGT 61.567 63.158 0.00 0.00 41.07 5.28
2077 5325 3.005472 TCAAGATATAAGGGCTCGTTCGG 59.995 47.826 0.00 0.00 0.00 4.30
2086 5334 3.834610 CCGCGTAGTCAAGATATAAGGG 58.165 50.000 4.92 0.00 0.00 3.95
2091 5339 1.037493 TGGCCGCGTAGTCAAGATAT 58.963 50.000 4.92 0.00 0.00 1.63
2094 5342 2.260434 GTGGCCGCGTAGTCAAGA 59.740 61.111 4.92 0.00 0.00 3.02
2095 5343 3.179265 CGTGGCCGCGTAGTCAAG 61.179 66.667 30.21 0.00 0.00 3.02
2124 5372 2.879233 GCTGACGGTGAGGTTCCCA 61.879 63.158 0.00 0.00 0.00 4.37
2145 5393 2.591311 GCTTTTCGACGACGTGCCA 61.591 57.895 4.58 0.00 40.69 4.92
2150 5398 2.092148 CGCTGCTTTTCGACGACG 59.908 61.111 0.00 0.00 41.26 5.12
2169 5417 2.895372 CCGTTCAGTATGCCGCCC 60.895 66.667 0.00 0.00 34.76 6.13
2240 5488 1.205655 TGATGCTTCTCTTCGTCAGGG 59.794 52.381 0.88 0.00 0.00 4.45
2372 5620 1.698506 CGTGCTCTCCTTATCCTCCT 58.301 55.000 0.00 0.00 0.00 3.69
2670 5921 1.934220 GCACCACGATCTCGGTCTGA 61.934 60.000 4.44 0.00 44.95 3.27
2676 5927 1.517257 GGACAGCACCACGATCTCG 60.517 63.158 0.00 0.00 46.33 4.04
3084 11579 1.339929 TGCTGCGTCTTGAAGTACTCA 59.660 47.619 0.00 0.00 0.00 3.41
3213 11708 2.284625 ATCCTCACGGCCCACTCA 60.285 61.111 0.00 0.00 0.00 3.41
3279 11779 3.562639 CGAGTTGTCGTTCACCTCA 57.437 52.632 8.06 0.00 41.57 3.86
3507 12009 0.101219 CGTCGTCCATCATGAGCAGA 59.899 55.000 0.09 0.00 0.00 4.26
3513 12015 2.104132 TCCGCGTCGTCCATCATG 59.896 61.111 4.92 0.00 0.00 3.07
3540 12042 3.705502 AGCTCGGTCATGCTCAGT 58.294 55.556 0.00 0.00 33.90 3.41
3649 12155 6.350906 ACTAGATCTAGTGGTACAGACAGAC 58.649 44.000 30.31 0.00 44.11 3.51
3668 12174 9.467796 TTGATTCAGAGAACATCTTCTACTAGA 57.532 33.333 0.00 0.00 36.82 2.43
3669 12175 9.515020 GTTGATTCAGAGAACATCTTCTACTAG 57.485 37.037 0.00 0.00 36.82 2.57
3670 12176 9.025041 TGTTGATTCAGAGAACATCTTCTACTA 57.975 33.333 0.00 0.00 36.82 1.82
3671 12177 7.901029 TGTTGATTCAGAGAACATCTTCTACT 58.099 34.615 0.00 0.00 36.82 2.57
3695 12201 2.286125 TGCTGAATCGTGTTGTTCGTTG 60.286 45.455 0.00 0.00 0.00 4.10
3696 12202 1.937223 TGCTGAATCGTGTTGTTCGTT 59.063 42.857 0.00 0.00 0.00 3.85
3698 12204 2.880822 ATGCTGAATCGTGTTGTTCG 57.119 45.000 0.00 0.00 0.00 3.95
3699 12205 4.145876 TCAATGCTGAATCGTGTTGTTC 57.854 40.909 0.00 0.00 0.00 3.18
3700 12206 4.771590 ATCAATGCTGAATCGTGTTGTT 57.228 36.364 0.00 0.00 34.49 2.83
3701 12207 4.771590 AATCAATGCTGAATCGTGTTGT 57.228 36.364 0.00 0.00 34.49 3.32
3712 12219 1.097232 TCGCCTCCAAATCAATGCTG 58.903 50.000 0.00 0.00 0.00 4.41
3713 12220 1.098050 GTCGCCTCCAAATCAATGCT 58.902 50.000 0.00 0.00 0.00 3.79
3722 12229 1.737236 CATTTCATTCGTCGCCTCCAA 59.263 47.619 0.00 0.00 0.00 3.53
3739 12246 4.529377 AGGAGCATCAACAATGGTTTCATT 59.471 37.500 0.00 0.00 45.93 2.57
3741 12248 3.499338 AGGAGCATCAACAATGGTTTCA 58.501 40.909 0.00 0.00 45.93 2.69
3742 12249 3.119352 GGAGGAGCATCAACAATGGTTTC 60.119 47.826 0.00 0.00 45.93 2.78
3744 12251 2.225091 TGGAGGAGCATCAACAATGGTT 60.225 45.455 0.00 0.00 45.93 3.67
3803 12333 2.549926 TCGCGATAGTACGTGGAACTA 58.450 47.619 3.71 0.00 42.78 2.24
3811 12341 3.979495 AGCCTAAAAATCGCGATAGTACG 59.021 43.478 24.00 10.97 39.35 3.67
3821 12351 8.466086 AATAAAAAGCAGAAGCCTAAAAATCG 57.534 30.769 0.00 0.00 43.56 3.34
3857 12387 8.450964 CGAGATTAAGTTTTCTTGGCATTCTAA 58.549 33.333 0.00 0.00 40.70 2.10
3858 12388 7.414098 GCGAGATTAAGTTTTCTTGGCATTCTA 60.414 37.037 0.00 0.00 40.70 2.10
3859 12389 6.623767 GCGAGATTAAGTTTTCTTGGCATTCT 60.624 38.462 0.00 0.00 40.70 2.40
3860 12390 5.513141 GCGAGATTAAGTTTTCTTGGCATTC 59.487 40.000 0.00 0.00 40.70 2.67
3861 12391 5.402398 GCGAGATTAAGTTTTCTTGGCATT 58.598 37.500 0.00 0.00 40.70 3.56
3862 12392 4.142381 GGCGAGATTAAGTTTTCTTGGCAT 60.142 41.667 17.57 0.00 44.39 4.40
3863 12393 3.190535 GGCGAGATTAAGTTTTCTTGGCA 59.809 43.478 17.57 0.00 44.39 4.92
3864 12394 3.427638 GGGCGAGATTAAGTTTTCTTGGC 60.428 47.826 15.58 15.58 44.31 4.52
3865 12395 3.756434 TGGGCGAGATTAAGTTTTCTTGG 59.244 43.478 0.00 0.00 40.70 3.61
3866 12396 4.215399 TGTGGGCGAGATTAAGTTTTCTTG 59.785 41.667 0.00 0.00 40.70 3.02
3867 12397 4.215613 GTGTGGGCGAGATTAAGTTTTCTT 59.784 41.667 0.00 0.00 43.24 2.52
3868 12398 3.751698 GTGTGGGCGAGATTAAGTTTTCT 59.248 43.478 0.00 0.00 0.00 2.52
3869 12399 3.424433 CGTGTGGGCGAGATTAAGTTTTC 60.424 47.826 0.00 0.00 0.00 2.29
3870 12400 2.482721 CGTGTGGGCGAGATTAAGTTTT 59.517 45.455 0.00 0.00 0.00 2.43
3871 12401 2.073816 CGTGTGGGCGAGATTAAGTTT 58.926 47.619 0.00 0.00 0.00 2.66
3872 12402 1.722011 CGTGTGGGCGAGATTAAGTT 58.278 50.000 0.00 0.00 0.00 2.66
3873 12403 0.739813 GCGTGTGGGCGAGATTAAGT 60.740 55.000 0.00 0.00 0.00 2.24
3874 12404 0.739462 TGCGTGTGGGCGAGATTAAG 60.739 55.000 0.00 0.00 35.06 1.85
3875 12405 0.107897 ATGCGTGTGGGCGAGATTAA 60.108 50.000 0.00 0.00 35.06 1.40
3876 12406 0.107897 AATGCGTGTGGGCGAGATTA 60.108 50.000 0.00 0.00 35.06 1.75
3877 12407 1.377202 AATGCGTGTGGGCGAGATT 60.377 52.632 0.00 0.00 35.06 2.40
3907 12437 4.549458 CCAAGATTCGTGCAAACTCAAAT 58.451 39.130 0.00 0.00 0.00 2.32
3969 12500 1.246649 GGATGAATGCACACACACCA 58.753 50.000 0.00 0.00 0.00 4.17
3978 12509 2.513666 GGCGACCGGATGAATGCA 60.514 61.111 9.46 0.00 0.00 3.96
4029 12560 1.165270 GAACTGCTAAACGCCCACAT 58.835 50.000 0.00 0.00 38.05 3.21
4049 12580 1.663695 CTGAAAACTGACGTGTGGGT 58.336 50.000 0.00 0.00 0.00 4.51
4092 12624 2.685897 GTGGGCGAACTAATAAATGCCA 59.314 45.455 3.24 0.00 44.21 4.92
4096 12628 2.353579 GCGTGTGGGCGAACTAATAAAT 59.646 45.455 0.00 0.00 0.00 1.40
4102 12634 4.382320 GGGCGTGTGGGCGAACTA 62.382 66.667 0.00 0.00 43.46 2.24
4137 12669 4.588899 ACACATGGCAACTGATAGCTTTA 58.411 39.130 0.00 0.00 37.61 1.85
4176 12709 7.898918 TGCTTACAAACATACTAGGACAGTTA 58.101 34.615 0.00 0.00 38.80 2.24
4182 12715 7.093509 TGTCATCTGCTTACAAACATACTAGGA 60.094 37.037 0.00 0.00 0.00 2.94
4192 12725 5.858381 AGAGAGTTGTCATCTGCTTACAAA 58.142 37.500 0.00 0.00 35.08 2.83
4262 12799 3.389983 TCTGGTAAACACTAGGCAGTTGT 59.610 43.478 0.00 0.00 30.46 3.32
4280 12817 3.634397 TCTTTAGGAGTTGCCATCTGG 57.366 47.619 0.00 0.00 40.02 3.86
4281 12818 6.426328 GTGATATCTTTAGGAGTTGCCATCTG 59.574 42.308 3.98 0.00 40.02 2.90
4343 12880 2.346766 AACACATGGCAACTGACAGA 57.653 45.000 10.08 0.00 35.91 3.41
4470 13013 3.508793 TGTCACCTACTAACACTAGGCAC 59.491 47.826 0.00 0.00 35.04 5.01
4565 13109 3.119708 GGTCAAGTGCCAGATGTCATTTC 60.120 47.826 0.00 0.00 0.00 2.17
4571 13115 1.059098 TCAGGTCAAGTGCCAGATGT 58.941 50.000 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.