Multiple sequence alignment - TraesCS4B01G344300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G344300 chr4B 100.000 4515 0 0 1 4515 637740597 637736083 0.000000e+00 8338.0
1 TraesCS4B01G344300 chr4B 93.023 43 2 1 3 45 627060645 627060686 1.360000e-05 62.1
2 TraesCS4B01G344300 chr4D 90.875 1874 84 36 1700 3522 497167985 497166148 0.000000e+00 2433.0
3 TraesCS4B01G344300 chr4D 90.021 1453 56 40 212 1585 497169622 497168180 0.000000e+00 1797.0
4 TraesCS4B01G344300 chr4D 91.711 374 23 6 3630 4000 497166107 497165739 3.120000e-141 512.0
5 TraesCS4B01G344300 chr4D 87.104 473 34 13 4048 4503 497165620 497165158 1.120000e-140 510.0
6 TraesCS4B01G344300 chr5A 89.775 1868 108 52 1700 3522 676967765 676965936 0.000000e+00 2314.0
7 TraesCS4B01G344300 chr5A 88.085 1410 71 31 225 1606 676969288 676967948 0.000000e+00 1583.0
8 TraesCS4B01G344300 chr5A 86.929 635 46 20 3568 4181 676964763 676964145 0.000000e+00 678.0
9 TraesCS4B01G344300 chr5A 90.415 313 14 7 3630 3927 676965880 676965569 9.100000e-107 398.0
10 TraesCS4B01G344300 chr5A 84.365 307 40 6 4201 4504 676965086 676964785 1.230000e-75 294.0
11 TraesCS4B01G344300 chr5A 90.845 142 12 1 4185 4326 676964165 676964025 5.960000e-44 189.0
12 TraesCS4B01G344300 chr1A 81.202 649 112 9 2732 3373 253728763 253728118 8.660000e-142 514.0
13 TraesCS4B01G344300 chr1A 80.795 604 92 14 2788 3383 254351401 254351988 6.890000e-123 451.0
14 TraesCS4B01G344300 chr1A 91.860 172 14 0 40 211 431032674 431032845 1.620000e-59 241.0
15 TraesCS4B01G344300 chr1A 79.795 292 53 6 1281 1568 254350469 254350758 1.650000e-49 207.0
16 TraesCS4B01G344300 chr1A 81.111 180 34 0 1288 1467 253731646 253731467 1.310000e-30 145.0
17 TraesCS4B01G344300 chr1A 88.073 109 12 1 1465 1573 253729563 253729456 1.320000e-25 128.0
18 TraesCS4B01G344300 chr1A 92.982 57 4 0 3939 3995 396427640 396427696 2.890000e-12 84.2
19 TraesCS4B01G344300 chr1A 100.000 33 0 0 3968 4000 482962090 482962058 1.360000e-05 62.1
20 TraesCS4B01G344300 chr1A 97.222 36 1 0 3965 4000 548733202 548733167 1.360000e-05 62.1
21 TraesCS4B01G344300 chr1B 79.085 612 104 14 2788 3391 288757739 288758334 2.530000e-107 399.0
22 TraesCS4B01G344300 chr1B 93.023 172 12 0 40 211 54995382 54995553 7.500000e-63 252.0
23 TraesCS4B01G344300 chr1B 79.730 296 46 9 1281 1568 288756808 288757097 7.660000e-48 202.0
24 TraesCS4B01G344300 chr1D 81.704 399 50 14 3114 3505 200464599 200464217 1.220000e-80 311.0
25 TraesCS4B01G344300 chr1D 81.703 317 46 5 3075 3391 200869277 200869581 2.080000e-63 254.0
26 TraesCS4B01G344300 chr1D 80.137 292 52 6 1281 1568 200868701 200868990 3.540000e-51 213.0
27 TraesCS4B01G344300 chr1D 96.970 33 1 0 3968 4000 383176761 383176729 6.310000e-04 56.5
28 TraesCS4B01G344300 chr3B 93.023 172 12 0 40 211 715068857 715069028 7.500000e-63 252.0
29 TraesCS4B01G344300 chr3B 91.279 172 15 0 40 211 23767745 23767574 7.550000e-58 235.0
30 TraesCS4B01G344300 chr5B 92.442 172 13 0 40 211 400101720 400101891 3.490000e-61 246.0
31 TraesCS4B01G344300 chr5B 91.279 172 15 0 40 211 43276721 43276550 7.550000e-58 235.0
32 TraesCS4B01G344300 chr5B 97.059 34 0 1 3962 3995 696165725 696165693 6.310000e-04 56.5
33 TraesCS4B01G344300 chr7B 91.860 172 14 0 40 211 602024634 602024463 1.620000e-59 241.0
34 TraesCS4B01G344300 chr7B 100.000 39 0 0 3 41 456344316 456344278 6.270000e-09 73.1
35 TraesCS4B01G344300 chr7D 91.228 171 15 0 41 211 506107089 506106919 2.720000e-57 233.0
36 TraesCS4B01G344300 chr7D 91.228 57 5 0 3939 3995 519273383 519273439 1.350000e-10 78.7
37 TraesCS4B01G344300 chr2B 90.643 171 16 0 41 211 722369124 722369294 1.260000e-55 228.0
38 TraesCS4B01G344300 chr6A 81.778 225 24 5 2793 3007 139896381 139896598 6.000000e-39 172.0
39 TraesCS4B01G344300 chr5D 91.228 57 5 0 3939 3995 430065202 430065258 1.350000e-10 78.7
40 TraesCS4B01G344300 chr5D 100.000 40 0 0 3 42 458628601 458628640 1.740000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G344300 chr4B 637736083 637740597 4514 True 8338.000000 8338 100.000000 1 4515 1 chr4B.!!$R1 4514
1 TraesCS4B01G344300 chr4D 497165158 497169622 4464 True 1313.000000 2433 89.927750 212 4503 4 chr4D.!!$R1 4291
2 TraesCS4B01G344300 chr5A 676964025 676969288 5263 True 909.333333 2314 88.402333 225 4504 6 chr5A.!!$R1 4279
3 TraesCS4B01G344300 chr1A 254350469 254351988 1519 False 329.000000 451 80.295000 1281 3383 2 chr1A.!!$F3 2102
4 TraesCS4B01G344300 chr1A 253728118 253731646 3528 True 262.333333 514 83.462000 1288 3373 3 chr1A.!!$R3 2085
5 TraesCS4B01G344300 chr1B 288756808 288758334 1526 False 300.500000 399 79.407500 1281 3391 2 chr1B.!!$F2 2110
6 TraesCS4B01G344300 chr1D 200868701 200869581 880 False 233.500000 254 80.920000 1281 3391 2 chr1D.!!$F1 2110

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
119 120 0.028902 AAAGCGGACACAAAGCGAAC 59.971 50.0 0.0 0.0 35.78 3.95 F
1649 3645 0.182299 TGTGTGCATGGTGGTCTCAA 59.818 50.0 0.0 0.0 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1887 4009 0.958091 CAAATCACCAACGGAAGCCA 59.042 50.0 0.0 0.0 0.0 4.75 R
3620 6072 0.040157 CTTCGTTCGGTCGGTACACA 60.040 55.0 0.0 0.0 0.0 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.776662 GGGGGTGGATAGAAAAAGGC 58.223 55.000 0.00 0.00 0.00 4.35
41 42 1.389555 GGGGTGGATAGAAAAAGGCG 58.610 55.000 0.00 0.00 0.00 5.52
42 43 1.340697 GGGGTGGATAGAAAAAGGCGT 60.341 52.381 0.00 0.00 0.00 5.68
43 44 2.014857 GGGTGGATAGAAAAAGGCGTC 58.985 52.381 0.00 0.00 0.00 5.19
44 45 2.014857 GGTGGATAGAAAAAGGCGTCC 58.985 52.381 0.00 0.00 0.00 4.79
45 46 1.664151 GTGGATAGAAAAAGGCGTCCG 59.336 52.381 0.00 0.00 0.00 4.79
46 47 0.656259 GGATAGAAAAAGGCGTCCGC 59.344 55.000 2.45 2.45 41.06 5.54
47 48 1.365699 GATAGAAAAAGGCGTCCGCA 58.634 50.000 14.19 0.00 44.11 5.69
48 49 1.940613 GATAGAAAAAGGCGTCCGCAT 59.059 47.619 14.19 2.98 44.11 4.73
49 50 1.083489 TAGAAAAAGGCGTCCGCATG 58.917 50.000 14.19 0.00 44.11 4.06
50 51 1.154035 GAAAAAGGCGTCCGCATGG 60.154 57.895 14.19 0.00 44.11 3.66
51 52 1.862602 GAAAAAGGCGTCCGCATGGT 61.863 55.000 14.19 0.00 44.11 3.55
52 53 2.141122 AAAAAGGCGTCCGCATGGTG 62.141 55.000 14.19 0.00 44.11 4.17
53 54 3.842925 AAAGGCGTCCGCATGGTGT 62.843 57.895 14.19 0.00 44.11 4.16
54 55 4.760047 AGGCGTCCGCATGGTGTC 62.760 66.667 14.19 0.00 44.11 3.67
57 58 4.735132 CGTCCGCATGGTGTCCGT 62.735 66.667 0.00 0.00 36.30 4.69
58 59 2.358247 GTCCGCATGGTGTCCGTT 60.358 61.111 0.00 0.00 36.30 4.44
59 60 1.964373 GTCCGCATGGTGTCCGTTT 60.964 57.895 0.00 0.00 36.30 3.60
60 61 1.669760 TCCGCATGGTGTCCGTTTC 60.670 57.895 0.00 0.00 36.30 2.78
61 62 1.963855 CCGCATGGTGTCCGTTTCA 60.964 57.895 0.00 0.00 0.00 2.69
62 63 1.206578 CGCATGGTGTCCGTTTCAC 59.793 57.895 0.00 0.00 35.36 3.18
66 67 2.511900 GGTGTCCGTTTCACCCCA 59.488 61.111 8.95 0.00 46.63 4.96
67 68 1.152922 GGTGTCCGTTTCACCCCAA 60.153 57.895 8.95 0.00 46.63 4.12
68 69 0.752376 GGTGTCCGTTTCACCCCAAA 60.752 55.000 8.95 0.00 46.63 3.28
69 70 1.104630 GTGTCCGTTTCACCCCAAAA 58.895 50.000 0.00 0.00 0.00 2.44
70 71 1.477295 GTGTCCGTTTCACCCCAAAAA 59.523 47.619 0.00 0.00 0.00 1.94
71 72 1.477295 TGTCCGTTTCACCCCAAAAAC 59.523 47.619 0.00 0.00 33.12 2.43
74 75 2.980562 GTTTCACCCCAAAAACGGC 58.019 52.632 0.00 0.00 0.00 5.68
75 76 0.872451 GTTTCACCCCAAAAACGGCG 60.872 55.000 4.80 4.80 0.00 6.46
76 77 2.630592 TTTCACCCCAAAAACGGCGC 62.631 55.000 6.90 0.00 0.00 6.53
77 78 3.905678 CACCCCAAAAACGGCGCA 61.906 61.111 10.83 0.00 0.00 6.09
78 79 3.148279 ACCCCAAAAACGGCGCAA 61.148 55.556 10.83 0.00 0.00 4.85
79 80 2.107141 CCCCAAAAACGGCGCAAA 59.893 55.556 10.83 0.00 0.00 3.68
80 81 2.241190 CCCCAAAAACGGCGCAAAC 61.241 57.895 10.83 0.00 0.00 2.93
81 82 1.227118 CCCAAAAACGGCGCAAACT 60.227 52.632 10.83 0.00 0.00 2.66
82 83 0.808060 CCCAAAAACGGCGCAAACTT 60.808 50.000 10.83 0.00 0.00 2.66
83 84 0.300193 CCAAAAACGGCGCAAACTTG 59.700 50.000 10.83 5.62 0.00 3.16
84 85 0.300193 CAAAAACGGCGCAAACTTGG 59.700 50.000 10.83 0.00 0.00 3.61
85 86 0.808060 AAAAACGGCGCAAACTTGGG 60.808 50.000 10.83 2.32 43.22 4.12
91 92 4.341502 CGCAAACTTGGGCCGTGG 62.342 66.667 0.00 0.00 34.31 4.94
92 93 2.909965 GCAAACTTGGGCCGTGGA 60.910 61.111 0.00 0.00 0.00 4.02
93 94 2.275380 GCAAACTTGGGCCGTGGAT 61.275 57.895 0.00 0.00 0.00 3.41
94 95 1.586028 CAAACTTGGGCCGTGGATG 59.414 57.895 0.00 0.00 0.00 3.51
95 96 1.606313 AAACTTGGGCCGTGGATGG 60.606 57.895 0.00 0.00 0.00 3.51
96 97 3.583882 AACTTGGGCCGTGGATGGG 62.584 63.158 0.00 0.00 0.00 4.00
97 98 4.047125 CTTGGGCCGTGGATGGGT 62.047 66.667 0.00 0.00 0.00 4.51
98 99 3.995506 CTTGGGCCGTGGATGGGTC 62.996 68.421 0.00 0.00 0.00 4.46
101 102 4.090588 GGCCGTGGATGGGTCGAA 62.091 66.667 0.00 0.00 0.00 3.71
102 103 2.046700 GCCGTGGATGGGTCGAAA 60.047 61.111 0.00 0.00 0.00 3.46
103 104 2.106683 GCCGTGGATGGGTCGAAAG 61.107 63.158 0.00 0.00 0.00 2.62
104 105 2.106683 CCGTGGATGGGTCGAAAGC 61.107 63.158 0.00 0.00 0.00 3.51
105 106 2.452813 CGTGGATGGGTCGAAAGCG 61.453 63.158 0.00 0.00 39.35 4.68
106 107 2.106683 GTGGATGGGTCGAAAGCGG 61.107 63.158 0.00 0.00 38.28 5.52
107 108 2.287274 TGGATGGGTCGAAAGCGGA 61.287 57.895 0.00 0.00 38.28 5.54
108 109 1.814169 GGATGGGTCGAAAGCGGAC 60.814 63.158 0.00 0.00 38.28 4.79
109 110 1.079405 GATGGGTCGAAAGCGGACA 60.079 57.895 0.00 0.00 38.28 4.02
110 111 1.359459 GATGGGTCGAAAGCGGACAC 61.359 60.000 0.00 0.31 38.28 3.67
111 112 2.029964 GGGTCGAAAGCGGACACA 59.970 61.111 0.00 0.00 38.28 3.72
112 113 1.595929 GGGTCGAAAGCGGACACAA 60.596 57.895 0.00 0.00 38.28 3.33
113 114 1.161563 GGGTCGAAAGCGGACACAAA 61.162 55.000 0.00 0.00 38.28 2.83
114 115 0.234884 GGTCGAAAGCGGACACAAAG 59.765 55.000 0.00 0.00 38.28 2.77
115 116 0.384353 GTCGAAAGCGGACACAAAGC 60.384 55.000 0.00 0.00 38.28 3.51
116 117 1.438710 CGAAAGCGGACACAAAGCG 60.439 57.895 0.00 0.00 35.78 4.68
117 118 1.827315 CGAAAGCGGACACAAAGCGA 61.827 55.000 0.00 0.00 35.78 4.93
118 119 0.306533 GAAAGCGGACACAAAGCGAA 59.693 50.000 0.00 0.00 35.78 4.70
119 120 0.028902 AAAGCGGACACAAAGCGAAC 59.971 50.000 0.00 0.00 35.78 3.95
120 121 1.092921 AAGCGGACACAAAGCGAACA 61.093 50.000 0.00 0.00 35.78 3.18
121 122 1.092921 AGCGGACACAAAGCGAACAA 61.093 50.000 0.00 0.00 35.78 2.83
122 123 0.248296 GCGGACACAAAGCGAACAAA 60.248 50.000 0.00 0.00 0.00 2.83
123 124 1.795889 GCGGACACAAAGCGAACAAAA 60.796 47.619 0.00 0.00 0.00 2.44
124 125 2.108700 CGGACACAAAGCGAACAAAAG 58.891 47.619 0.00 0.00 0.00 2.27
125 126 2.477189 CGGACACAAAGCGAACAAAAGT 60.477 45.455 0.00 0.00 0.00 2.66
126 127 3.105937 GGACACAAAGCGAACAAAAGTC 58.894 45.455 0.00 0.00 0.00 3.01
127 128 3.105937 GACACAAAGCGAACAAAAGTCC 58.894 45.455 0.00 0.00 0.00 3.85
128 129 2.108700 CACAAAGCGAACAAAAGTCCG 58.891 47.619 0.00 0.00 0.00 4.79
129 130 1.741145 ACAAAGCGAACAAAAGTCCGT 59.259 42.857 0.00 0.00 0.00 4.69
130 131 2.162809 ACAAAGCGAACAAAAGTCCGTT 59.837 40.909 0.00 0.00 0.00 4.44
131 132 3.175929 CAAAGCGAACAAAAGTCCGTTT 58.824 40.909 0.00 0.00 0.00 3.60
132 133 4.142643 ACAAAGCGAACAAAAGTCCGTTTA 60.143 37.500 0.00 0.00 0.00 2.01
133 134 3.597377 AGCGAACAAAAGTCCGTTTAC 57.403 42.857 0.00 0.00 0.00 2.01
134 135 2.033492 AGCGAACAAAAGTCCGTTTACG 60.033 45.455 0.00 0.00 39.44 3.18
135 136 2.292237 CGAACAAAAGTCCGTTTACGC 58.708 47.619 0.00 0.00 38.18 4.42
136 137 2.033492 CGAACAAAAGTCCGTTTACGCT 60.033 45.455 0.00 0.00 38.18 5.07
137 138 3.538780 GAACAAAAGTCCGTTTACGCTC 58.461 45.455 0.00 0.00 38.18 5.03
138 139 1.523934 ACAAAAGTCCGTTTACGCTCG 59.476 47.619 0.00 0.00 38.18 5.03
139 140 0.509929 AAAAGTCCGTTTACGCTCGC 59.490 50.000 0.00 0.00 38.18 5.03
140 141 1.611592 AAAGTCCGTTTACGCTCGCG 61.612 55.000 10.06 10.06 46.03 5.87
141 142 4.187498 GTCCGTTTACGCTCGCGC 62.187 66.667 11.65 0.00 44.19 6.86
159 160 3.423154 GCTGGGCCGTCTCGTTTG 61.423 66.667 0.00 0.00 0.00 2.93
160 161 2.030562 CTGGGCCGTCTCGTTTGT 59.969 61.111 0.00 0.00 0.00 2.83
161 162 2.027625 CTGGGCCGTCTCGTTTGTC 61.028 63.158 0.00 0.00 0.00 3.18
162 163 2.741211 GGGCCGTCTCGTTTGTCC 60.741 66.667 0.00 0.00 0.00 4.02
163 164 2.741211 GGCCGTCTCGTTTGTCCC 60.741 66.667 0.00 0.00 0.00 4.46
164 165 2.342648 GCCGTCTCGTTTGTCCCT 59.657 61.111 0.00 0.00 0.00 4.20
165 166 1.301479 GCCGTCTCGTTTGTCCCTT 60.301 57.895 0.00 0.00 0.00 3.95
166 167 0.883370 GCCGTCTCGTTTGTCCCTTT 60.883 55.000 0.00 0.00 0.00 3.11
167 168 1.589803 CCGTCTCGTTTGTCCCTTTT 58.410 50.000 0.00 0.00 0.00 2.27
168 169 2.758009 CCGTCTCGTTTGTCCCTTTTA 58.242 47.619 0.00 0.00 0.00 1.52
169 170 3.332034 CCGTCTCGTTTGTCCCTTTTAT 58.668 45.455 0.00 0.00 0.00 1.40
170 171 3.370061 CCGTCTCGTTTGTCCCTTTTATC 59.630 47.826 0.00 0.00 0.00 1.75
171 172 3.370061 CGTCTCGTTTGTCCCTTTTATCC 59.630 47.826 0.00 0.00 0.00 2.59
172 173 3.688185 GTCTCGTTTGTCCCTTTTATCCC 59.312 47.826 0.00 0.00 0.00 3.85
173 174 3.328343 TCTCGTTTGTCCCTTTTATCCCA 59.672 43.478 0.00 0.00 0.00 4.37
174 175 4.076394 CTCGTTTGTCCCTTTTATCCCAA 58.924 43.478 0.00 0.00 0.00 4.12
175 176 4.471548 TCGTTTGTCCCTTTTATCCCAAA 58.528 39.130 0.00 0.00 0.00 3.28
176 177 4.894114 TCGTTTGTCCCTTTTATCCCAAAA 59.106 37.500 0.00 0.00 0.00 2.44
177 178 5.010213 TCGTTTGTCCCTTTTATCCCAAAAG 59.990 40.000 3.09 3.09 37.08 2.27
178 179 5.010213 CGTTTGTCCCTTTTATCCCAAAAGA 59.990 40.000 10.30 0.00 39.04 2.52
179 180 6.461788 CGTTTGTCCCTTTTATCCCAAAAGAA 60.462 38.462 10.30 0.00 39.04 2.52
180 181 6.413783 TTGTCCCTTTTATCCCAAAAGAAC 57.586 37.500 10.30 8.66 39.04 3.01
181 182 4.521256 TGTCCCTTTTATCCCAAAAGAACG 59.479 41.667 10.30 0.00 39.04 3.95
182 183 4.082408 GTCCCTTTTATCCCAAAAGAACGG 60.082 45.833 10.30 4.61 39.04 4.44
183 184 4.083565 CCCTTTTATCCCAAAAGAACGGA 58.916 43.478 10.30 0.00 39.04 4.69
184 185 4.157840 CCCTTTTATCCCAAAAGAACGGAG 59.842 45.833 10.30 0.00 39.04 4.63
185 186 5.007682 CCTTTTATCCCAAAAGAACGGAGA 58.992 41.667 10.30 0.00 39.04 3.71
186 187 5.106277 CCTTTTATCCCAAAAGAACGGAGAC 60.106 44.000 10.30 0.00 39.04 3.36
200 201 1.777941 GGAGACGGACAGGATAAGGT 58.222 55.000 0.00 0.00 0.00 3.50
201 202 1.682323 GGAGACGGACAGGATAAGGTC 59.318 57.143 0.00 0.00 0.00 3.85
202 203 1.334243 GAGACGGACAGGATAAGGTCG 59.666 57.143 0.00 0.00 34.87 4.79
203 204 0.248949 GACGGACAGGATAAGGTCGC 60.249 60.000 0.00 0.00 34.87 5.19
204 205 1.299165 CGGACAGGATAAGGTCGCG 60.299 63.158 0.00 0.00 34.87 5.87
205 206 1.591863 GGACAGGATAAGGTCGCGC 60.592 63.158 0.00 0.00 34.87 6.86
206 207 1.591863 GACAGGATAAGGTCGCGCC 60.592 63.158 0.00 6.31 37.58 6.53
207 208 2.658593 CAGGATAAGGTCGCGCCG 60.659 66.667 0.00 0.00 43.70 6.46
208 209 3.145551 AGGATAAGGTCGCGCCGT 61.146 61.111 0.00 7.27 43.70 5.68
209 210 2.960129 GGATAAGGTCGCGCCGTG 60.960 66.667 15.62 0.00 43.70 4.94
210 211 2.960129 GATAAGGTCGCGCCGTGG 60.960 66.667 15.62 0.00 43.70 4.94
254 259 1.068748 CAGTTGCCAAGATCACACTGC 60.069 52.381 0.00 0.00 0.00 4.40
303 332 3.104766 CCGCATCATGTGGCTGAC 58.895 61.111 3.73 0.00 41.59 3.51
316 345 0.320771 GGCTGACACACCACGAGAAT 60.321 55.000 0.00 0.00 0.00 2.40
347 376 1.320344 ATTACACAGCCGAGCCGAGA 61.320 55.000 0.00 0.00 0.00 4.04
375 404 2.099263 ACCACGTCTGATCTAATCCACG 59.901 50.000 0.00 6.87 39.27 4.94
412 441 2.573609 AATACTCCCTCGCCGCACAC 62.574 60.000 0.00 0.00 0.00 3.82
593 640 4.953868 CACGTCGCCGTCCCACAA 62.954 66.667 0.00 0.00 46.28 3.33
869 928 3.192922 CATTCCGACCGGCGAACC 61.193 66.667 17.96 0.00 44.57 3.62
880 939 1.064952 CCGGCGAACCCATTCAATAAC 59.935 52.381 9.30 0.00 34.14 1.89
882 941 2.223249 CGGCGAACCCATTCAATAACAG 60.223 50.000 0.00 0.00 34.14 3.16
892 951 0.322322 TCAATAACAGCCCCGTTCGT 59.678 50.000 0.00 0.00 0.00 3.85
900 959 3.980989 CCCCGTTCGTCCGTCACA 61.981 66.667 0.00 0.00 0.00 3.58
907 966 2.132762 GTTCGTCCGTCACATTCTGTT 58.867 47.619 0.00 0.00 0.00 3.16
908 967 2.060326 TCGTCCGTCACATTCTGTTC 57.940 50.000 0.00 0.00 0.00 3.18
909 968 1.611977 TCGTCCGTCACATTCTGTTCT 59.388 47.619 0.00 0.00 0.00 3.01
910 969 2.035449 TCGTCCGTCACATTCTGTTCTT 59.965 45.455 0.00 0.00 0.00 2.52
920 979 1.961793 TTCTGTTCTTTCACCGGTGG 58.038 50.000 33.40 18.31 0.00 4.61
929 988 1.348064 TTCACCGGTGGTCTGATCTT 58.652 50.000 33.40 0.00 31.02 2.40
930 989 0.608130 TCACCGGTGGTCTGATCTTG 59.392 55.000 33.40 4.20 31.02 3.02
931 990 1.021390 CACCGGTGGTCTGATCTTGC 61.021 60.000 27.57 0.00 31.02 4.01
933 992 0.460987 CCGGTGGTCTGATCTTGCTC 60.461 60.000 0.00 0.00 0.00 4.26
950 1009 2.105128 CTGAGCATCGTCCGTCCC 59.895 66.667 0.00 0.00 38.61 4.46
951 1010 2.678580 TGAGCATCGTCCGTCCCA 60.679 61.111 0.00 0.00 38.61 4.37
952 1011 2.225791 CTGAGCATCGTCCGTCCCAA 62.226 60.000 0.00 0.00 38.61 4.12
953 1012 1.519455 GAGCATCGTCCGTCCCAAG 60.519 63.158 0.00 0.00 0.00 3.61
954 1013 3.195698 GCATCGTCCGTCCCAAGC 61.196 66.667 0.00 0.00 0.00 4.01
955 1014 2.511600 CATCGTCCGTCCCAAGCC 60.512 66.667 0.00 0.00 0.00 4.35
979 1055 4.874282 CGTACGCGCGTGATCCGA 62.874 66.667 42.78 21.62 39.56 4.55
1580 3576 1.197264 AGTCAAGTACGTCGTGCTCTC 59.803 52.381 16.53 9.75 0.00 3.20
1588 3584 1.679305 GTCGTGCTCTCCTCCTCCA 60.679 63.158 0.00 0.00 0.00 3.86
1590 3586 0.324738 TCGTGCTCTCCTCCTCCATT 60.325 55.000 0.00 0.00 0.00 3.16
1591 3587 1.063942 TCGTGCTCTCCTCCTCCATTA 60.064 52.381 0.00 0.00 0.00 1.90
1592 3588 1.757118 CGTGCTCTCCTCCTCCATTAA 59.243 52.381 0.00 0.00 0.00 1.40
1593 3589 2.366916 CGTGCTCTCCTCCTCCATTAAT 59.633 50.000 0.00 0.00 0.00 1.40
1594 3590 3.181461 CGTGCTCTCCTCCTCCATTAATT 60.181 47.826 0.00 0.00 0.00 1.40
1595 3591 4.384940 GTGCTCTCCTCCTCCATTAATTC 58.615 47.826 0.00 0.00 0.00 2.17
1597 3593 3.650461 GCTCTCCTCCTCCATTAATTCCT 59.350 47.826 0.00 0.00 0.00 3.36
1598 3594 4.262851 GCTCTCCTCCTCCATTAATTCCTC 60.263 50.000 0.00 0.00 0.00 3.71
1601 3597 4.646157 TCCTCCTCCATTAATTCCTCCTT 58.354 43.478 0.00 0.00 0.00 3.36
1602 3598 5.799536 TCCTCCTCCATTAATTCCTCCTTA 58.200 41.667 0.00 0.00 0.00 2.69
1603 3599 5.607171 TCCTCCTCCATTAATTCCTCCTTAC 59.393 44.000 0.00 0.00 0.00 2.34
1604 3600 5.608860 CCTCCTCCATTAATTCCTCCTTACT 59.391 44.000 0.00 0.00 0.00 2.24
1605 3601 6.787957 CCTCCTCCATTAATTCCTCCTTACTA 59.212 42.308 0.00 0.00 0.00 1.82
1608 3604 8.517047 TCCTCCATTAATTCCTCCTTACTAGTA 58.483 37.037 0.00 0.00 0.00 1.82
1609 3605 8.808092 CCTCCATTAATTCCTCCTTACTAGTAG 58.192 40.741 2.23 0.00 0.00 2.57
1610 3606 9.369672 CTCCATTAATTCCTCCTTACTAGTAGT 57.630 37.037 8.14 8.14 0.00 2.73
1642 3638 2.616960 ACGTAGTATGTGTGCATGGTG 58.383 47.619 0.00 0.00 41.94 4.17
1644 3640 2.676750 CGTAGTATGTGTGCATGGTGGT 60.677 50.000 0.00 0.00 36.58 4.16
1645 3641 2.113860 AGTATGTGTGCATGGTGGTC 57.886 50.000 0.00 0.00 36.58 4.02
1647 3643 2.009774 GTATGTGTGCATGGTGGTCTC 58.990 52.381 0.00 0.00 36.58 3.36
1648 3644 0.401356 ATGTGTGCATGGTGGTCTCA 59.599 50.000 0.00 0.00 33.37 3.27
1649 3645 0.182299 TGTGTGCATGGTGGTCTCAA 59.818 50.000 0.00 0.00 0.00 3.02
1650 3646 1.202915 TGTGTGCATGGTGGTCTCAAT 60.203 47.619 0.00 0.00 0.00 2.57
1651 3647 1.470098 GTGTGCATGGTGGTCTCAATC 59.530 52.381 0.00 0.00 0.00 2.67
1653 3649 2.224843 TGTGCATGGTGGTCTCAATCTT 60.225 45.455 0.00 0.00 0.00 2.40
1656 3665 2.416431 GCATGGTGGTCTCAATCTTTGC 60.416 50.000 0.00 0.00 0.00 3.68
1670 3679 8.239314 TCTCAATCTTTGCACATTCTTGTATTC 58.761 33.333 0.00 0.00 33.76 1.75
1671 3680 7.884257 TCAATCTTTGCACATTCTTGTATTCA 58.116 30.769 0.00 0.00 33.76 2.57
1673 3682 9.791820 CAATCTTTGCACATTCTTGTATTCATA 57.208 29.630 0.00 0.00 33.76 2.15
1681 3690 9.740239 GCACATTCTTGTATTCATACATGATTT 57.260 29.630 13.49 5.32 42.92 2.17
1687 3696 9.778741 TCTTGTATTCATACATGATTTAGGGTC 57.221 33.333 0.00 0.00 42.32 4.46
1737 3827 1.202405 CCGCCCATTGCCATTAGTTTC 60.202 52.381 0.00 0.00 36.24 2.78
1753 3856 4.351874 AGTTTCTAGCCACTTGCACTTA 57.648 40.909 0.00 0.00 44.83 2.24
1756 3859 3.040147 TCTAGCCACTTGCACTTACAC 57.960 47.619 0.00 0.00 44.83 2.90
1795 3898 3.293337 ACGCTATGATGGGTACAGTACA 58.707 45.455 12.89 0.00 0.00 2.90
1796 3899 3.702548 ACGCTATGATGGGTACAGTACAA 59.297 43.478 12.89 0.59 0.00 2.41
1797 3900 4.344102 ACGCTATGATGGGTACAGTACAAT 59.656 41.667 12.89 5.54 0.00 2.71
1798 3901 5.537295 ACGCTATGATGGGTACAGTACAATA 59.463 40.000 12.89 0.00 0.00 1.90
1799 3902 5.862323 CGCTATGATGGGTACAGTACAATAC 59.138 44.000 12.89 0.00 0.00 1.89
1820 3923 9.861138 CAATACTACGTATAGAACTGTGTAGAC 57.139 37.037 0.00 0.00 34.77 2.59
1829 3932 2.563261 ACTGTGTAGACGAGAGACCA 57.437 50.000 0.00 0.00 0.00 4.02
1830 3933 3.074675 ACTGTGTAGACGAGAGACCAT 57.925 47.619 0.00 0.00 0.00 3.55
1831 3934 3.422796 ACTGTGTAGACGAGAGACCATT 58.577 45.455 0.00 0.00 0.00 3.16
1832 3935 3.191581 ACTGTGTAGACGAGAGACCATTG 59.808 47.826 0.00 0.00 0.00 2.82
1833 3936 3.418047 TGTGTAGACGAGAGACCATTGA 58.582 45.455 0.00 0.00 0.00 2.57
1834 3937 3.440522 TGTGTAGACGAGAGACCATTGAG 59.559 47.826 0.00 0.00 0.00 3.02
1835 3938 3.017442 TGTAGACGAGAGACCATTGAGG 58.983 50.000 0.00 0.00 45.67 3.86
1836 3939 0.820871 AGACGAGAGACCATTGAGGC 59.179 55.000 0.00 0.00 43.14 4.70
1837 3940 0.532573 GACGAGAGACCATTGAGGCA 59.467 55.000 0.00 0.00 43.14 4.75
1838 3941 0.976641 ACGAGAGACCATTGAGGCAA 59.023 50.000 0.00 0.00 43.14 4.52
1839 3942 1.347707 ACGAGAGACCATTGAGGCAAA 59.652 47.619 0.00 0.00 43.14 3.68
1840 3943 1.734465 CGAGAGACCATTGAGGCAAAC 59.266 52.381 0.00 0.00 43.14 2.93
1841 3944 2.783135 GAGAGACCATTGAGGCAAACA 58.217 47.619 0.00 0.00 43.14 2.83
1842 3945 3.350833 GAGAGACCATTGAGGCAAACAT 58.649 45.455 0.00 0.00 43.14 2.71
1843 3946 3.350833 AGAGACCATTGAGGCAAACATC 58.649 45.455 0.00 0.00 43.14 3.06
1844 3947 2.086869 AGACCATTGAGGCAAACATCG 58.913 47.619 0.00 0.00 43.14 3.84
1845 3948 1.812571 GACCATTGAGGCAAACATCGT 59.187 47.619 0.00 0.00 43.14 3.73
1846 3949 1.812571 ACCATTGAGGCAAACATCGTC 59.187 47.619 0.00 0.00 43.14 4.20
1855 3977 2.726241 GGCAAACATCGTCAAGAAAAGC 59.274 45.455 0.00 0.00 0.00 3.51
1935 4058 3.195610 CGGGAAATCGGGATCTCATATGA 59.804 47.826 5.07 5.07 0.00 2.15
1967 4090 1.534595 ACTCGTGACGTAGAAGTGACC 59.465 52.381 4.40 0.00 0.00 4.02
1968 4091 0.514255 TCGTGACGTAGAAGTGACCG 59.486 55.000 4.40 0.00 0.00 4.79
1969 4092 0.236711 CGTGACGTAGAAGTGACCGT 59.763 55.000 0.00 0.00 36.04 4.83
2106 4229 3.370061 AGCTTGGATAACGAAAAGTACGC 59.630 43.478 0.00 0.00 0.00 4.42
2164 4304 2.103042 GCCCACTCTGCACGTGATC 61.103 63.158 22.23 2.42 34.35 2.92
2267 4410 7.804843 ATTCATCTTTCATCAGAATCAGGAC 57.195 36.000 0.00 0.00 32.89 3.85
2268 4411 6.556974 TCATCTTTCATCAGAATCAGGACT 57.443 37.500 0.00 0.00 32.89 3.85
2269 4412 7.666063 TCATCTTTCATCAGAATCAGGACTA 57.334 36.000 0.00 0.00 32.89 2.59
2270 4413 7.724287 TCATCTTTCATCAGAATCAGGACTAG 58.276 38.462 0.00 0.00 32.89 2.57
2325 4468 8.475331 AAAAATACATCTAGTAATATCGGCGG 57.525 34.615 7.21 0.00 36.05 6.13
2326 4469 5.769484 ATACATCTAGTAATATCGGCGGG 57.231 43.478 7.21 0.00 36.05 6.13
2335 4478 5.613329 AGTAATATCGGCGGGAAAATTACA 58.387 37.500 20.98 0.00 38.63 2.41
2581 4754 3.499737 GCCTTCCGCGACCACATG 61.500 66.667 8.23 0.00 0.00 3.21
2903 5354 0.593518 CTGGTACTCGCAGATGCTCG 60.594 60.000 2.95 0.00 39.32 5.03
3522 5974 4.261801 GCCCTCTGCAACTAATCAACTAA 58.738 43.478 0.00 0.00 40.77 2.24
3523 5975 4.095036 GCCCTCTGCAACTAATCAACTAAC 59.905 45.833 0.00 0.00 40.77 2.34
3524 5976 5.491982 CCCTCTGCAACTAATCAACTAACT 58.508 41.667 0.00 0.00 0.00 2.24
3525 5977 5.582665 CCCTCTGCAACTAATCAACTAACTC 59.417 44.000 0.00 0.00 0.00 3.01
3526 5978 6.402222 CCTCTGCAACTAATCAACTAACTCT 58.598 40.000 0.00 0.00 0.00 3.24
3527 5979 6.533367 CCTCTGCAACTAATCAACTAACTCTC 59.467 42.308 0.00 0.00 0.00 3.20
3528 5980 6.093404 TCTGCAACTAATCAACTAACTCTCG 58.907 40.000 0.00 0.00 0.00 4.04
3529 5981 4.625742 TGCAACTAATCAACTAACTCTCGC 59.374 41.667 0.00 0.00 0.00 5.03
3530 5982 4.033014 GCAACTAATCAACTAACTCTCGCC 59.967 45.833 0.00 0.00 0.00 5.54
3531 5983 4.030134 ACTAATCAACTAACTCTCGCCG 57.970 45.455 0.00 0.00 0.00 6.46
3532 5984 3.693085 ACTAATCAACTAACTCTCGCCGA 59.307 43.478 0.00 0.00 0.00 5.54
3533 5985 2.563471 ATCAACTAACTCTCGCCGAC 57.437 50.000 0.00 0.00 0.00 4.79
3534 5986 0.167470 TCAACTAACTCTCGCCGACG 59.833 55.000 0.00 0.00 42.01 5.12
3535 5987 1.154073 AACTAACTCTCGCCGACGC 60.154 57.895 0.00 0.00 39.84 5.19
3536 5988 2.278013 CTAACTCTCGCCGACGCC 60.278 66.667 0.00 0.00 39.84 5.68
3537 5989 4.170062 TAACTCTCGCCGACGCCG 62.170 66.667 0.00 0.00 39.84 6.46
3540 5992 4.592936 CTCTCGCCGACGCCGTAG 62.593 72.222 0.00 0.00 39.84 3.51
3542 5994 4.592936 CTCGCCGACGCCGTAGAG 62.593 72.222 0.00 0.00 39.84 2.43
3544 5996 3.950254 CGCCGACGCCGTAGAGAT 61.950 66.667 0.00 0.00 0.00 2.75
3545 5997 2.051166 GCCGACGCCGTAGAGATC 60.051 66.667 0.00 0.00 0.00 2.75
3546 5998 2.544698 GCCGACGCCGTAGAGATCT 61.545 63.158 0.00 0.00 0.00 2.75
3547 5999 2.023318 CCGACGCCGTAGAGATCTT 58.977 57.895 0.00 0.00 0.00 2.40
3548 6000 0.041135 CCGACGCCGTAGAGATCTTC 60.041 60.000 0.00 0.00 0.00 2.87
3549 6001 0.938713 CGACGCCGTAGAGATCTTCT 59.061 55.000 0.00 0.00 40.06 2.85
3550 6002 1.331138 CGACGCCGTAGAGATCTTCTT 59.669 52.381 0.00 0.00 37.36 2.52
3551 6003 2.543012 CGACGCCGTAGAGATCTTCTTA 59.457 50.000 0.00 0.00 37.36 2.10
3552 6004 3.186817 CGACGCCGTAGAGATCTTCTTAT 59.813 47.826 0.00 0.00 37.36 1.73
3553 6005 4.388165 CGACGCCGTAGAGATCTTCTTATA 59.612 45.833 0.00 0.00 37.36 0.98
3554 6006 5.063691 CGACGCCGTAGAGATCTTCTTATAT 59.936 44.000 0.00 0.00 37.36 0.86
3555 6007 6.184580 ACGCCGTAGAGATCTTCTTATATG 57.815 41.667 0.00 0.00 37.36 1.78
3556 6008 5.124138 ACGCCGTAGAGATCTTCTTATATGG 59.876 44.000 0.00 2.27 37.36 2.74
3557 6009 5.124138 CGCCGTAGAGATCTTCTTATATGGT 59.876 44.000 0.00 0.00 37.36 3.55
3558 6010 6.326375 GCCGTAGAGATCTTCTTATATGGTG 58.674 44.000 0.00 0.00 37.36 4.17
3559 6011 6.626181 GCCGTAGAGATCTTCTTATATGGTGG 60.626 46.154 0.00 0.00 37.36 4.61
3560 6012 6.434652 CCGTAGAGATCTTCTTATATGGTGGT 59.565 42.308 0.00 0.00 37.36 4.16
3561 6013 7.610692 CCGTAGAGATCTTCTTATATGGTGGTA 59.389 40.741 0.00 0.00 37.36 3.25
3562 6014 9.011095 CGTAGAGATCTTCTTATATGGTGGTAA 57.989 37.037 0.00 0.00 37.36 2.85
3565 6017 9.440761 AGAGATCTTCTTATATGGTGGTAAACT 57.559 33.333 0.00 0.00 29.61 2.66
3589 6041 9.445878 ACTATGCATACATACATACGTACTACT 57.554 33.333 1.16 0.00 37.74 2.57
3593 6045 9.439500 TGCATACATACATACGTACTACTATGA 57.561 33.333 0.00 0.00 0.00 2.15
3602 6054 9.297586 ACATACGTACTACTATGATTTGTTGTG 57.702 33.333 0.00 0.00 0.00 3.33
3603 6055 9.511144 CATACGTACTACTATGATTTGTTGTGA 57.489 33.333 0.00 0.00 0.00 3.58
3605 6057 8.630278 ACGTACTACTATGATTTGTTGTGATC 57.370 34.615 0.00 0.00 0.00 2.92
3606 6058 7.705325 ACGTACTACTATGATTTGTTGTGATCC 59.295 37.037 0.00 0.00 0.00 3.36
3607 6059 7.096599 CGTACTACTATGATTTGTTGTGATCCG 60.097 40.741 0.00 0.00 0.00 4.18
3609 6061 2.830772 ATGATTTGTTGTGATCCGCG 57.169 45.000 0.00 0.00 0.00 6.46
3610 6062 1.518325 TGATTTGTTGTGATCCGCGT 58.482 45.000 4.92 0.00 0.00 6.01
3611 6063 2.689646 TGATTTGTTGTGATCCGCGTA 58.310 42.857 4.92 0.00 0.00 4.42
3612 6064 2.413796 TGATTTGTTGTGATCCGCGTAC 59.586 45.455 4.92 0.00 0.00 3.67
3613 6065 0.785378 TTTGTTGTGATCCGCGTACG 59.215 50.000 11.84 11.84 39.67 3.67
3614 6066 0.318869 TTGTTGTGATCCGCGTACGT 60.319 50.000 17.90 0.00 37.70 3.57
3615 6067 0.730155 TGTTGTGATCCGCGTACGTC 60.730 55.000 17.90 6.90 37.70 4.34
3623 6075 3.455195 CGCGTACGTCGTGGTGTG 61.455 66.667 17.90 0.33 44.94 3.82
3624 6076 2.353839 GCGTACGTCGTGGTGTGT 60.354 61.111 17.90 0.00 42.13 3.72
3625 6077 1.082169 GCGTACGTCGTGGTGTGTA 60.082 57.895 17.90 0.00 42.13 2.90
3626 6078 1.330080 GCGTACGTCGTGGTGTGTAC 61.330 60.000 17.90 0.00 42.13 2.90
3653 6105 0.841289 ACGAAGGTGGGAAGGAAACA 59.159 50.000 0.00 0.00 0.00 2.83
3656 6108 3.265995 ACGAAGGTGGGAAGGAAACATAT 59.734 43.478 0.00 0.00 0.00 1.78
3666 6118 4.263506 GGAAGGAAACATATGGGGATCGAT 60.264 45.833 7.80 0.00 0.00 3.59
3702 6158 2.781595 CTTGGGAGTAGTTGCCGCGT 62.782 60.000 4.92 0.00 40.91 6.01
3713 6169 3.491652 GCCGCGTCTGAAGCTTCC 61.492 66.667 23.42 7.53 0.00 3.46
3721 6177 2.742856 CGTCTGAAGCTTCCATGGCATA 60.743 50.000 23.42 1.33 0.00 3.14
3746 6202 4.592936 CGGTCTCGGCGTCGCTAG 62.593 72.222 18.11 14.65 36.13 3.42
3805 6266 4.094684 CTACCGCAGTAGCAGTGC 57.905 61.111 7.13 7.13 39.66 4.40
3827 6288 4.261405 GCTGCACTGTAAGATCGATACTCT 60.261 45.833 0.00 0.00 37.43 3.24
3861 6322 1.009829 GCCTTGCTGTATCTGTTCCG 58.990 55.000 0.00 0.00 0.00 4.30
3874 6339 5.803020 ATCTGTTCCGCTAAAGTGAAATC 57.197 39.130 0.00 0.00 0.00 2.17
3929 6397 5.756347 TGCTATCTTCTACTCTCTTCGTCTC 59.244 44.000 0.00 0.00 0.00 3.36
3935 6652 8.148807 TCTTCTACTCTCTTCGTCTCATAATG 57.851 38.462 0.00 0.00 0.00 1.90
3937 6654 7.485418 TCTACTCTCTTCGTCTCATAATGTC 57.515 40.000 0.00 0.00 0.00 3.06
3985 6702 4.782019 TTGGCTTGCAAAACGATCTTAT 57.218 36.364 0.00 0.00 0.00 1.73
3986 6703 5.888691 TTGGCTTGCAAAACGATCTTATA 57.111 34.783 0.00 0.00 0.00 0.98
3988 6705 6.449635 TGGCTTGCAAAACGATCTTATATT 57.550 33.333 0.00 0.00 0.00 1.28
3989 6706 7.561021 TGGCTTGCAAAACGATCTTATATTA 57.439 32.000 0.00 0.00 0.00 0.98
3990 6707 8.165239 TGGCTTGCAAAACGATCTTATATTAT 57.835 30.769 0.00 0.00 0.00 1.28
3992 6709 8.289618 GGCTTGCAAAACGATCTTATATTATGA 58.710 33.333 0.00 0.00 0.00 2.15
3993 6710 9.322776 GCTTGCAAAACGATCTTATATTATGAG 57.677 33.333 0.00 0.00 0.00 2.90
4033 6804 1.449778 GGGAGTACCGCTTTGGAGC 60.450 63.158 0.00 0.00 45.65 4.70
4046 6839 0.171231 TTGGAGCGTCATCGACTGAG 59.829 55.000 0.00 0.00 39.71 3.35
4055 6848 3.125487 CGTCATCGACTGAGTGACTTAGT 59.875 47.826 9.98 9.98 39.96 2.24
4080 6873 7.010923 GTCTCTCATCAACCATACAATCTTCAC 59.989 40.741 0.00 0.00 0.00 3.18
4084 6877 6.891361 TCATCAACCATACAATCTTCACCAAT 59.109 34.615 0.00 0.00 0.00 3.16
4085 6878 6.513806 TCAACCATACAATCTTCACCAATG 57.486 37.500 0.00 0.00 0.00 2.82
4087 6880 3.701040 ACCATACAATCTTCACCAATGGC 59.299 43.478 0.00 0.00 36.66 4.40
4089 6882 2.610438 ACAATCTTCACCAATGGCCT 57.390 45.000 3.32 0.00 0.00 5.19
4090 6883 2.173519 ACAATCTTCACCAATGGCCTG 58.826 47.619 3.32 0.00 0.00 4.85
4091 6884 1.134907 CAATCTTCACCAATGGCCTGC 60.135 52.381 3.32 0.00 0.00 4.85
4092 6885 0.333993 ATCTTCACCAATGGCCTGCT 59.666 50.000 3.32 0.00 0.00 4.24
4110 6908 1.613520 GCTTTACCCCTCACTTCCCAC 60.614 57.143 0.00 0.00 0.00 4.61
4111 6909 1.985895 CTTTACCCCTCACTTCCCACT 59.014 52.381 0.00 0.00 0.00 4.00
4122 6920 2.127708 ACTTCCCACTCCAAGAACTGT 58.872 47.619 0.00 0.00 0.00 3.55
4193 6994 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4195 6996 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4197 6998 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4199 7000 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4201 7002 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4203 7004 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4205 7006 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4207 7008 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4209 7010 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4211 7012 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4212 7013 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
4213 7014 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4216 7017 5.272402 TCTCTCTCTCTCTCTCTCTCTCAA 58.728 45.833 0.00 0.00 0.00 3.02
4244 7045 5.575218 CACACACAATGTAGTGCGTATAGAA 59.425 40.000 13.20 0.00 40.64 2.10
4249 7050 8.726988 ACACAATGTAGTGCGTATAGAATTTTT 58.273 29.630 0.00 0.00 43.23 1.94
4250 7051 9.210426 CACAATGTAGTGCGTATAGAATTTTTC 57.790 33.333 0.00 0.00 32.04 2.29
4451 7260 8.707796 ACTTACTATATGCACTACAGTATGGT 57.292 34.615 0.00 0.00 43.62 3.55
4458 7267 2.947652 GCACTACAGTATGGTACGGAGA 59.052 50.000 0.00 0.00 43.62 3.71
4469 7278 6.832384 AGTATGGTACGGAGAGAGTATGAAAA 59.168 38.462 0.00 0.00 0.00 2.29
4473 7282 6.153851 TGGTACGGAGAGAGTATGAAAAATGA 59.846 38.462 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.918201 CCTTCCTCCGGCCGCATC 62.918 72.222 22.85 0.00 0.00 3.91
21 22 1.776662 GCCTTTTTCTATCCACCCCC 58.223 55.000 0.00 0.00 0.00 5.40
22 23 1.340697 ACGCCTTTTTCTATCCACCCC 60.341 52.381 0.00 0.00 0.00 4.95
23 24 2.014857 GACGCCTTTTTCTATCCACCC 58.985 52.381 0.00 0.00 0.00 4.61
24 25 2.014857 GGACGCCTTTTTCTATCCACC 58.985 52.381 0.00 0.00 0.00 4.61
25 26 1.664151 CGGACGCCTTTTTCTATCCAC 59.336 52.381 0.00 0.00 0.00 4.02
26 27 2.010043 GCGGACGCCTTTTTCTATCCA 61.010 52.381 5.20 0.00 34.56 3.41
27 28 0.656259 GCGGACGCCTTTTTCTATCC 59.344 55.000 5.20 0.00 34.56 2.59
28 29 1.365699 TGCGGACGCCTTTTTCTATC 58.634 50.000 14.61 0.00 41.09 2.08
29 30 1.670811 CATGCGGACGCCTTTTTCTAT 59.329 47.619 14.61 0.00 41.09 1.98
30 31 1.083489 CATGCGGACGCCTTTTTCTA 58.917 50.000 14.61 0.00 41.09 2.10
31 32 1.586154 CCATGCGGACGCCTTTTTCT 61.586 55.000 14.61 0.00 41.09 2.52
32 33 1.154035 CCATGCGGACGCCTTTTTC 60.154 57.895 14.61 0.00 41.09 2.29
33 34 1.901464 ACCATGCGGACGCCTTTTT 60.901 52.632 14.61 0.00 41.09 1.94
34 35 2.282180 ACCATGCGGACGCCTTTT 60.282 55.556 14.61 0.00 41.09 2.27
35 36 3.055719 CACCATGCGGACGCCTTT 61.056 61.111 14.61 0.00 41.09 3.11
36 37 4.329545 ACACCATGCGGACGCCTT 62.330 61.111 14.61 0.00 41.09 4.35
37 38 4.760047 GACACCATGCGGACGCCT 62.760 66.667 14.61 0.77 41.09 5.52
50 51 1.104630 TTTTGGGGTGAAACGGACAC 58.895 50.000 0.00 0.00 38.12 3.67
51 52 1.477295 GTTTTTGGGGTGAAACGGACA 59.523 47.619 0.00 0.00 38.12 4.02
52 53 2.212869 GTTTTTGGGGTGAAACGGAC 57.787 50.000 0.00 0.00 38.12 4.79
56 57 0.872451 CGCCGTTTTTGGGGTGAAAC 60.872 55.000 0.00 0.00 37.20 2.78
57 58 1.437986 CGCCGTTTTTGGGGTGAAA 59.562 52.632 0.00 0.00 37.20 2.69
58 59 3.121019 CGCCGTTTTTGGGGTGAA 58.879 55.556 0.00 0.00 37.20 3.18
59 60 3.597728 GCGCCGTTTTTGGGGTGA 61.598 61.111 0.00 0.00 43.50 4.02
60 61 2.907897 TTTGCGCCGTTTTTGGGGTG 62.908 55.000 4.18 0.00 43.50 4.61
61 62 2.722201 TTTGCGCCGTTTTTGGGGT 61.722 52.632 4.18 0.00 43.50 4.95
62 63 2.107141 TTTGCGCCGTTTTTGGGG 59.893 55.556 4.18 0.00 44.36 4.96
63 64 0.808060 AAGTTTGCGCCGTTTTTGGG 60.808 50.000 4.18 0.00 0.00 4.12
64 65 0.300193 CAAGTTTGCGCCGTTTTTGG 59.700 50.000 4.18 0.00 0.00 3.28
65 66 0.300193 CCAAGTTTGCGCCGTTTTTG 59.700 50.000 4.18 3.33 0.00 2.44
66 67 0.808060 CCCAAGTTTGCGCCGTTTTT 60.808 50.000 4.18 0.00 0.00 1.94
67 68 1.227118 CCCAAGTTTGCGCCGTTTT 60.227 52.632 4.18 0.00 0.00 2.43
68 69 2.415426 CCCAAGTTTGCGCCGTTT 59.585 55.556 4.18 0.00 0.00 3.60
69 70 4.279043 GCCCAAGTTTGCGCCGTT 62.279 61.111 4.18 0.00 0.00 4.44
73 74 4.999939 CACGGCCCAAGTTTGCGC 63.000 66.667 0.00 0.00 0.00 6.09
74 75 4.341502 CCACGGCCCAAGTTTGCG 62.342 66.667 0.00 0.00 0.00 4.85
75 76 2.275380 ATCCACGGCCCAAGTTTGC 61.275 57.895 0.00 0.00 0.00 3.68
76 77 1.586028 CATCCACGGCCCAAGTTTG 59.414 57.895 0.00 0.00 0.00 2.93
77 78 1.606313 CCATCCACGGCCCAAGTTT 60.606 57.895 0.00 0.00 0.00 2.66
78 79 2.035626 CCATCCACGGCCCAAGTT 59.964 61.111 0.00 0.00 0.00 2.66
79 80 4.047125 CCCATCCACGGCCCAAGT 62.047 66.667 0.00 0.00 0.00 3.16
80 81 3.995506 GACCCATCCACGGCCCAAG 62.996 68.421 0.00 0.00 0.00 3.61
81 82 4.041762 GACCCATCCACGGCCCAA 62.042 66.667 0.00 0.00 0.00 4.12
84 85 3.615509 TTTCGACCCATCCACGGCC 62.616 63.158 0.00 0.00 0.00 6.13
85 86 2.046700 TTTCGACCCATCCACGGC 60.047 61.111 0.00 0.00 0.00 5.68
86 87 2.106683 GCTTTCGACCCATCCACGG 61.107 63.158 0.00 0.00 0.00 4.94
87 88 2.452813 CGCTTTCGACCCATCCACG 61.453 63.158 0.00 0.00 38.10 4.94
88 89 2.106683 CCGCTTTCGACCCATCCAC 61.107 63.158 0.00 0.00 38.10 4.02
89 90 2.267642 CCGCTTTCGACCCATCCA 59.732 61.111 0.00 0.00 38.10 3.41
90 91 1.814169 GTCCGCTTTCGACCCATCC 60.814 63.158 0.00 0.00 38.10 3.51
91 92 1.079405 TGTCCGCTTTCGACCCATC 60.079 57.895 0.00 0.00 38.10 3.51
92 93 1.375523 GTGTCCGCTTTCGACCCAT 60.376 57.895 0.00 0.00 38.10 4.00
93 94 2.029964 GTGTCCGCTTTCGACCCA 59.970 61.111 0.00 0.00 38.10 4.51
94 95 1.161563 TTTGTGTCCGCTTTCGACCC 61.162 55.000 0.00 0.00 38.10 4.46
95 96 0.234884 CTTTGTGTCCGCTTTCGACC 59.765 55.000 0.00 0.00 38.10 4.79
96 97 0.384353 GCTTTGTGTCCGCTTTCGAC 60.384 55.000 0.00 0.00 38.10 4.20
97 98 1.827315 CGCTTTGTGTCCGCTTTCGA 61.827 55.000 0.00 0.00 38.10 3.71
98 99 1.438710 CGCTTTGTGTCCGCTTTCG 60.439 57.895 0.00 0.00 0.00 3.46
99 100 0.306533 TTCGCTTTGTGTCCGCTTTC 59.693 50.000 0.00 0.00 0.00 2.62
100 101 0.028902 GTTCGCTTTGTGTCCGCTTT 59.971 50.000 0.00 0.00 0.00 3.51
101 102 1.092921 TGTTCGCTTTGTGTCCGCTT 61.093 50.000 0.00 0.00 0.00 4.68
102 103 1.092921 TTGTTCGCTTTGTGTCCGCT 61.093 50.000 0.00 0.00 0.00 5.52
103 104 0.248296 TTTGTTCGCTTTGTGTCCGC 60.248 50.000 0.00 0.00 0.00 5.54
104 105 2.108700 CTTTTGTTCGCTTTGTGTCCG 58.891 47.619 0.00 0.00 0.00 4.79
105 106 3.105937 GACTTTTGTTCGCTTTGTGTCC 58.894 45.455 0.00 0.00 0.00 4.02
106 107 3.105937 GGACTTTTGTTCGCTTTGTGTC 58.894 45.455 0.00 0.00 0.00 3.67
107 108 2.477189 CGGACTTTTGTTCGCTTTGTGT 60.477 45.455 0.00 0.00 45.13 3.72
108 109 2.108700 CGGACTTTTGTTCGCTTTGTG 58.891 47.619 0.00 0.00 45.13 3.33
109 110 2.468532 CGGACTTTTGTTCGCTTTGT 57.531 45.000 0.00 0.00 45.13 2.83
116 117 3.538780 GAGCGTAAACGGACTTTTGTTC 58.461 45.455 4.49 0.00 40.23 3.18
117 118 2.033492 CGAGCGTAAACGGACTTTTGTT 60.033 45.455 4.49 0.00 40.23 2.83
118 119 1.523934 CGAGCGTAAACGGACTTTTGT 59.476 47.619 4.49 0.00 40.23 2.83
119 120 1.720547 GCGAGCGTAAACGGACTTTTG 60.721 52.381 4.49 0.00 40.23 2.44
120 121 0.509929 GCGAGCGTAAACGGACTTTT 59.490 50.000 4.49 0.00 40.23 2.27
121 122 1.611592 CGCGAGCGTAAACGGACTTT 61.612 55.000 0.00 0.00 40.23 2.66
122 123 2.084681 CGCGAGCGTAAACGGACTT 61.085 57.895 0.00 0.00 40.23 3.01
123 124 2.503375 CGCGAGCGTAAACGGACT 60.503 61.111 0.00 0.00 40.23 3.85
142 143 3.423154 CAAACGAGACGGCCCAGC 61.423 66.667 0.00 0.00 0.00 4.85
143 144 2.027625 GACAAACGAGACGGCCCAG 61.028 63.158 0.00 0.00 0.00 4.45
144 145 2.029964 GACAAACGAGACGGCCCA 59.970 61.111 0.00 0.00 0.00 5.36
145 146 2.741211 GGACAAACGAGACGGCCC 60.741 66.667 0.00 0.00 0.00 5.80
146 147 2.726822 AAGGGACAAACGAGACGGCC 62.727 60.000 0.00 0.00 0.00 6.13
147 148 0.883370 AAAGGGACAAACGAGACGGC 60.883 55.000 0.00 0.00 0.00 5.68
148 149 1.589803 AAAAGGGACAAACGAGACGG 58.410 50.000 0.00 0.00 0.00 4.79
149 150 3.370061 GGATAAAAGGGACAAACGAGACG 59.630 47.826 0.00 0.00 0.00 4.18
150 151 3.688185 GGGATAAAAGGGACAAACGAGAC 59.312 47.826 0.00 0.00 0.00 3.36
151 152 3.328343 TGGGATAAAAGGGACAAACGAGA 59.672 43.478 0.00 0.00 0.00 4.04
152 153 3.681593 TGGGATAAAAGGGACAAACGAG 58.318 45.455 0.00 0.00 0.00 4.18
153 154 3.791953 TGGGATAAAAGGGACAAACGA 57.208 42.857 0.00 0.00 0.00 3.85
154 155 4.857509 TTTGGGATAAAAGGGACAAACG 57.142 40.909 0.00 0.00 0.00 3.60
155 156 6.413783 TCTTTTGGGATAAAAGGGACAAAC 57.586 37.500 11.02 0.00 37.72 2.93
156 157 6.461788 CGTTCTTTTGGGATAAAAGGGACAAA 60.462 38.462 11.02 0.00 37.72 2.83
157 158 5.010213 CGTTCTTTTGGGATAAAAGGGACAA 59.990 40.000 11.02 0.00 37.72 3.18
158 159 4.521256 CGTTCTTTTGGGATAAAAGGGACA 59.479 41.667 11.02 0.00 37.72 4.02
159 160 4.082408 CCGTTCTTTTGGGATAAAAGGGAC 60.082 45.833 11.02 9.46 37.72 4.46
160 161 4.083565 CCGTTCTTTTGGGATAAAAGGGA 58.916 43.478 11.02 0.61 37.72 4.20
161 162 4.083565 TCCGTTCTTTTGGGATAAAAGGG 58.916 43.478 11.02 6.12 37.72 3.95
162 163 5.007682 TCTCCGTTCTTTTGGGATAAAAGG 58.992 41.667 11.02 0.00 37.72 3.11
163 164 5.390567 CGTCTCCGTTCTTTTGGGATAAAAG 60.391 44.000 5.93 5.93 38.30 2.27
164 165 4.453136 CGTCTCCGTTCTTTTGGGATAAAA 59.547 41.667 0.00 0.00 0.00 1.52
165 166 3.998341 CGTCTCCGTTCTTTTGGGATAAA 59.002 43.478 0.00 0.00 0.00 1.40
166 167 3.592059 CGTCTCCGTTCTTTTGGGATAA 58.408 45.455 0.00 0.00 0.00 1.75
167 168 2.093869 CCGTCTCCGTTCTTTTGGGATA 60.094 50.000 0.00 0.00 0.00 2.59
168 169 1.338769 CCGTCTCCGTTCTTTTGGGAT 60.339 52.381 0.00 0.00 0.00 3.85
169 170 0.034337 CCGTCTCCGTTCTTTTGGGA 59.966 55.000 0.00 0.00 0.00 4.37
170 171 0.034337 TCCGTCTCCGTTCTTTTGGG 59.966 55.000 0.00 0.00 0.00 4.12
171 172 1.145803 GTCCGTCTCCGTTCTTTTGG 58.854 55.000 0.00 0.00 0.00 3.28
172 173 1.792949 CTGTCCGTCTCCGTTCTTTTG 59.207 52.381 0.00 0.00 0.00 2.44
173 174 1.270147 CCTGTCCGTCTCCGTTCTTTT 60.270 52.381 0.00 0.00 0.00 2.27
174 175 0.317479 CCTGTCCGTCTCCGTTCTTT 59.683 55.000 0.00 0.00 0.00 2.52
175 176 0.538977 TCCTGTCCGTCTCCGTTCTT 60.539 55.000 0.00 0.00 0.00 2.52
176 177 0.323542 ATCCTGTCCGTCTCCGTTCT 60.324 55.000 0.00 0.00 0.00 3.01
177 178 1.386533 TATCCTGTCCGTCTCCGTTC 58.613 55.000 0.00 0.00 0.00 3.95
178 179 1.749634 CTTATCCTGTCCGTCTCCGTT 59.250 52.381 0.00 0.00 0.00 4.44
179 180 1.390565 CTTATCCTGTCCGTCTCCGT 58.609 55.000 0.00 0.00 0.00 4.69
180 181 0.669077 CCTTATCCTGTCCGTCTCCG 59.331 60.000 0.00 0.00 0.00 4.63
181 182 1.682323 GACCTTATCCTGTCCGTCTCC 59.318 57.143 0.00 0.00 0.00 3.71
182 183 1.334243 CGACCTTATCCTGTCCGTCTC 59.666 57.143 0.00 0.00 0.00 3.36
183 184 1.390565 CGACCTTATCCTGTCCGTCT 58.609 55.000 0.00 0.00 0.00 4.18
184 185 0.248949 GCGACCTTATCCTGTCCGTC 60.249 60.000 0.00 0.00 0.00 4.79
185 186 1.814527 GCGACCTTATCCTGTCCGT 59.185 57.895 0.00 0.00 0.00 4.69
186 187 1.299165 CGCGACCTTATCCTGTCCG 60.299 63.158 0.00 0.00 0.00 4.79
187 188 1.591863 GCGCGACCTTATCCTGTCC 60.592 63.158 12.10 0.00 0.00 4.02
188 189 1.591863 GGCGCGACCTTATCCTGTC 60.592 63.158 12.10 0.00 34.51 3.51
189 190 2.499685 GGCGCGACCTTATCCTGT 59.500 61.111 12.10 0.00 34.51 4.00
190 191 2.658593 CGGCGCGACCTTATCCTG 60.659 66.667 12.10 0.00 35.61 3.86
191 192 3.145551 ACGGCGCGACCTTATCCT 61.146 61.111 12.10 0.00 35.61 3.24
192 193 2.960129 CACGGCGCGACCTTATCC 60.960 66.667 12.10 0.00 35.61 2.59
193 194 2.960129 CCACGGCGCGACCTTATC 60.960 66.667 12.10 0.00 35.61 1.75
203 204 3.130819 TTGCATTAGGCCACGGCG 61.131 61.111 5.01 4.80 43.89 6.46
204 205 1.666209 ATGTTGCATTAGGCCACGGC 61.666 55.000 5.01 3.27 40.89 5.68
205 206 0.381801 GATGTTGCATTAGGCCACGG 59.618 55.000 5.01 0.00 40.89 4.94
206 207 1.093972 TGATGTTGCATTAGGCCACG 58.906 50.000 5.01 0.00 40.89 4.94
207 208 2.230992 TGTTGATGTTGCATTAGGCCAC 59.769 45.455 5.01 0.00 43.89 5.01
208 209 2.523245 TGTTGATGTTGCATTAGGCCA 58.477 42.857 5.01 0.00 43.89 5.36
209 210 3.450578 CATGTTGATGTTGCATTAGGCC 58.549 45.455 0.00 0.00 43.89 5.19
210 211 2.861935 GCATGTTGATGTTGCATTAGGC 59.138 45.455 0.00 0.00 36.40 3.93
254 259 3.195825 AGATCCCGTGAAGGTAAAGTGAG 59.804 47.826 0.00 0.00 38.74 3.51
302 331 3.469008 TTCTGAATTCTCGTGGTGTGT 57.531 42.857 7.05 0.00 0.00 3.72
303 332 4.811555 TTTTCTGAATTCTCGTGGTGTG 57.188 40.909 7.05 0.00 0.00 3.82
326 355 1.141881 CGGCTCGGCTGTGTAATCT 59.858 57.895 0.00 0.00 0.00 2.40
331 360 4.057428 GTCTCGGCTCGGCTGTGT 62.057 66.667 4.89 0.00 36.18 3.72
347 376 1.919956 GATCAGACGTGGTCGGTCGT 61.920 60.000 0.00 0.00 43.00 4.34
375 404 1.153353 TTTTTCTCGTCCACGGATGC 58.847 50.000 0.00 0.00 40.29 3.91
420 449 3.539107 GCGTCTCGTTTACCGGCG 61.539 66.667 0.00 0.00 37.11 6.46
427 456 0.110373 GCGGAAAATGCGTCTCGTTT 60.110 50.000 0.00 0.00 35.51 3.60
474 503 1.348938 CGGTCTCTCTCGCTGTACG 59.651 63.158 0.00 0.00 45.62 3.67
664 711 2.426023 GTGAGGGCAACGTGAGGT 59.574 61.111 0.00 0.00 37.60 3.85
705 752 3.961414 GAAAGGTGGCGGTGGGGA 61.961 66.667 0.00 0.00 0.00 4.81
750 806 4.424711 GGGGCTGACAATGGCGGA 62.425 66.667 0.00 0.00 0.00 5.54
753 809 3.070576 GGTGGGGCTGACAATGGC 61.071 66.667 0.00 0.00 0.00 4.40
869 928 1.762708 ACGGGGCTGTTATTGAATGG 58.237 50.000 0.00 0.00 0.00 3.16
898 957 6.744217 ACCACCGGTGAAAGAACAGAATGT 62.744 45.833 36.07 16.65 44.37 2.71
899 958 2.226437 CCACCGGTGAAAGAACAGAATG 59.774 50.000 36.07 10.21 46.00 2.67
900 959 2.158667 ACCACCGGTGAAAGAACAGAAT 60.159 45.455 36.07 0.00 32.98 2.40
907 966 1.275291 GATCAGACCACCGGTGAAAGA 59.725 52.381 36.07 25.01 35.25 2.52
908 967 1.276421 AGATCAGACCACCGGTGAAAG 59.724 52.381 36.07 21.23 35.25 2.62
909 968 1.348064 AGATCAGACCACCGGTGAAA 58.652 50.000 36.07 15.56 35.25 2.69
910 969 1.001974 CAAGATCAGACCACCGGTGAA 59.998 52.381 36.07 15.21 35.25 3.18
930 989 1.587613 GACGGACGATGCTCAGAGC 60.588 63.158 16.21 16.21 42.82 4.09
931 990 1.064946 GGACGGACGATGCTCAGAG 59.935 63.158 0.00 0.00 0.00 3.35
933 992 2.105128 GGGACGGACGATGCTCAG 59.895 66.667 0.00 0.00 0.00 3.35
963 1022 3.310251 GTCGGATCACGCGCGTAC 61.310 66.667 37.24 24.87 43.86 3.67
964 1023 4.541482 GGTCGGATCACGCGCGTA 62.541 66.667 37.24 23.40 43.86 4.42
991 1067 2.184020 TTGAGGGCCATGTGGACGAG 62.184 60.000 6.18 0.00 47.00 4.18
1580 3576 5.608860 AGTAAGGAGGAATTAATGGAGGAGG 59.391 44.000 0.00 0.00 0.00 4.30
1616 3612 4.669283 CATGCACACATACTACGTACGTAG 59.331 45.833 40.10 40.10 43.04 3.51
1620 3616 3.550275 CACCATGCACACATACTACGTAC 59.450 47.826 0.00 0.00 33.67 3.67
1621 3617 3.429684 CCACCATGCACACATACTACGTA 60.430 47.826 0.00 0.00 33.67 3.57
1622 3618 2.616960 CACCATGCACACATACTACGT 58.383 47.619 0.00 0.00 33.67 3.57
1623 3619 1.933181 CCACCATGCACACATACTACG 59.067 52.381 0.00 0.00 33.67 3.51
1624 3620 2.936498 GACCACCATGCACACATACTAC 59.064 50.000 0.00 0.00 33.67 2.73
1625 3621 2.837591 AGACCACCATGCACACATACTA 59.162 45.455 0.00 0.00 33.67 1.82
1626 3622 1.630369 AGACCACCATGCACACATACT 59.370 47.619 0.00 0.00 33.67 2.12
1627 3623 2.009774 GAGACCACCATGCACACATAC 58.990 52.381 0.00 0.00 33.67 2.39
1631 3627 1.470098 GATTGAGACCACCATGCACAC 59.530 52.381 0.00 0.00 0.00 3.82
1633 3629 2.119801 AGATTGAGACCACCATGCAC 57.880 50.000 0.00 0.00 0.00 4.57
1635 3631 2.416431 GCAAAGATTGAGACCACCATGC 60.416 50.000 0.00 0.00 0.00 4.06
1637 3633 2.821969 GTGCAAAGATTGAGACCACCAT 59.178 45.455 0.00 0.00 0.00 3.55
1639 3635 2.229792 TGTGCAAAGATTGAGACCACC 58.770 47.619 0.00 0.00 0.00 4.61
1640 3636 4.217118 AGAATGTGCAAAGATTGAGACCAC 59.783 41.667 0.00 0.00 0.00 4.16
1641 3637 4.401022 AGAATGTGCAAAGATTGAGACCA 58.599 39.130 0.00 0.00 0.00 4.02
1642 3638 5.159209 CAAGAATGTGCAAAGATTGAGACC 58.841 41.667 0.00 0.00 0.00 3.85
1644 3640 7.692460 ATACAAGAATGTGCAAAGATTGAGA 57.308 32.000 5.71 0.00 40.84 3.27
1645 3641 8.024865 TGAATACAAGAATGTGCAAAGATTGAG 58.975 33.333 5.71 0.00 40.84 3.02
1647 3643 8.697846 ATGAATACAAGAATGTGCAAAGATTG 57.302 30.769 0.00 0.00 40.84 2.67
1648 3644 9.793252 GTATGAATACAAGAATGTGCAAAGATT 57.207 29.630 0.00 0.00 40.84 2.40
1649 3645 8.959548 TGTATGAATACAAGAATGTGCAAAGAT 58.040 29.630 0.61 0.00 40.08 2.40
1650 3646 8.334263 TGTATGAATACAAGAATGTGCAAAGA 57.666 30.769 0.61 0.00 40.08 2.52
1651 3647 9.016623 CATGTATGAATACAAGAATGTGCAAAG 57.983 33.333 7.21 0.00 45.40 2.77
1653 3649 8.278729 TCATGTATGAATACAAGAATGTGCAA 57.721 30.769 7.21 0.00 45.40 4.08
1670 3679 6.366332 GCTTCTACGACCCTAAATCATGTATG 59.634 42.308 0.00 0.00 0.00 2.39
1671 3680 6.041637 TGCTTCTACGACCCTAAATCATGTAT 59.958 38.462 0.00 0.00 0.00 2.29
1673 3682 4.161565 TGCTTCTACGACCCTAAATCATGT 59.838 41.667 0.00 0.00 0.00 3.21
1681 3690 2.176889 AGCTTTGCTTCTACGACCCTA 58.823 47.619 0.00 0.00 33.89 3.53
1682 3691 0.977395 AGCTTTGCTTCTACGACCCT 59.023 50.000 0.00 0.00 33.89 4.34
1683 3692 1.464997 CAAGCTTTGCTTCTACGACCC 59.535 52.381 0.00 0.00 46.77 4.46
1684 3693 1.135944 GCAAGCTTTGCTTCTACGACC 60.136 52.381 0.00 0.00 46.77 4.79
1737 3827 3.045601 AGTGTAAGTGCAAGTGGCTAG 57.954 47.619 0.00 0.00 45.15 3.42
1753 3856 5.168569 CGTTTGTCTACCACATGATAGTGT 58.831 41.667 0.00 0.00 37.82 3.55
1756 3859 4.433615 AGCGTTTGTCTACCACATGATAG 58.566 43.478 0.00 0.00 33.90 2.08
1799 3902 6.694844 TCTCGTCTACACAGTTCTATACGTAG 59.305 42.308 0.08 0.00 0.00 3.51
1820 3923 1.734465 GTTTGCCTCAATGGTCTCTCG 59.266 52.381 0.00 0.00 38.35 4.04
1829 3932 3.411446 TCTTGACGATGTTTGCCTCAAT 58.589 40.909 0.00 0.00 0.00 2.57
1830 3933 2.844946 TCTTGACGATGTTTGCCTCAA 58.155 42.857 0.00 0.00 0.00 3.02
1831 3934 2.542020 TCTTGACGATGTTTGCCTCA 57.458 45.000 0.00 0.00 0.00 3.86
1832 3935 3.896648 TTTCTTGACGATGTTTGCCTC 57.103 42.857 0.00 0.00 0.00 4.70
1833 3936 3.550842 GCTTTTCTTGACGATGTTTGCCT 60.551 43.478 0.00 0.00 0.00 4.75
1834 3937 2.726241 GCTTTTCTTGACGATGTTTGCC 59.274 45.455 0.00 0.00 0.00 4.52
1835 3938 3.371168 TGCTTTTCTTGACGATGTTTGC 58.629 40.909 0.00 0.00 0.00 3.68
1836 3939 5.036737 AGTTGCTTTTCTTGACGATGTTTG 58.963 37.500 0.00 0.00 0.00 2.93
1837 3940 5.248870 AGTTGCTTTTCTTGACGATGTTT 57.751 34.783 0.00 0.00 0.00 2.83
1838 3941 4.900635 AGTTGCTTTTCTTGACGATGTT 57.099 36.364 0.00 0.00 0.00 2.71
1839 3942 4.096382 ACAAGTTGCTTTTCTTGACGATGT 59.904 37.500 1.81 0.00 42.22 3.06
1840 3943 4.601019 ACAAGTTGCTTTTCTTGACGATG 58.399 39.130 1.81 0.00 42.22 3.84
1841 3944 4.900635 ACAAGTTGCTTTTCTTGACGAT 57.099 36.364 1.81 0.00 42.22 3.73
1842 3945 4.695217 AACAAGTTGCTTTTCTTGACGA 57.305 36.364 1.81 0.00 42.22 4.20
1843 3946 6.430451 AGATAACAAGTTGCTTTTCTTGACG 58.570 36.000 1.81 0.00 42.22 4.35
1844 3947 8.131731 AGAAGATAACAAGTTGCTTTTCTTGAC 58.868 33.333 18.72 11.23 42.22 3.18
1845 3948 8.225603 AGAAGATAACAAGTTGCTTTTCTTGA 57.774 30.769 18.72 0.00 42.22 3.02
1846 3949 8.862550 AAGAAGATAACAAGTTGCTTTTCTTG 57.137 30.769 18.72 0.00 44.29 3.02
1855 3977 5.327091 CGCCATGAAGAAGATAACAAGTTG 58.673 41.667 0.00 0.00 0.00 3.16
1887 4009 0.958091 CAAATCACCAACGGAAGCCA 59.042 50.000 0.00 0.00 0.00 4.75
1888 4010 1.200020 CTCAAATCACCAACGGAAGCC 59.800 52.381 0.00 0.00 0.00 4.35
2053 4176 2.291741 GTCTGACTTGAGGCCAGTTTTG 59.708 50.000 5.01 0.00 0.00 2.44
2106 4229 1.144057 GGGCAGGGATCACGTACAG 59.856 63.158 0.00 0.00 0.00 2.74
2241 4384 9.504708 GTCCTGATTCTGATGAAAGATGAATAT 57.495 33.333 0.00 0.00 35.63 1.28
2253 4396 7.667635 TGTACTATCCTAGTCCTGATTCTGATG 59.332 40.741 0.00 0.00 40.14 3.07
2258 4401 6.294065 CCGTTGTACTATCCTAGTCCTGATTC 60.294 46.154 0.00 0.00 40.14 2.52
2259 4402 5.535406 CCGTTGTACTATCCTAGTCCTGATT 59.465 44.000 0.00 0.00 40.14 2.57
2260 4403 5.071370 CCGTTGTACTATCCTAGTCCTGAT 58.929 45.833 0.00 0.00 40.14 2.90
2261 4404 4.164796 TCCGTTGTACTATCCTAGTCCTGA 59.835 45.833 0.00 0.00 40.14 3.86
2262 4405 4.275443 GTCCGTTGTACTATCCTAGTCCTG 59.725 50.000 0.00 0.00 40.14 3.86
2263 4406 4.080129 TGTCCGTTGTACTATCCTAGTCCT 60.080 45.833 0.00 0.00 40.14 3.85
2264 4407 4.202441 TGTCCGTTGTACTATCCTAGTCC 58.798 47.826 0.00 0.00 40.14 3.85
2265 4408 7.502120 TTATGTCCGTTGTACTATCCTAGTC 57.498 40.000 0.00 0.00 40.14 2.59
2266 4409 7.886629 TTTATGTCCGTTGTACTATCCTAGT 57.113 36.000 0.00 0.00 42.68 2.57
2304 4447 5.443283 TCCCGCCGATATTACTAGATGTAT 58.557 41.667 0.00 0.00 0.00 2.29
2311 4454 6.757237 TGTAATTTTCCCGCCGATATTACTA 58.243 36.000 0.00 0.00 33.58 1.82
2532 4705 4.814294 CGTAGCACTGGACGGGGC 62.814 72.222 0.00 0.00 35.43 5.80
2932 5383 1.079750 GGTGAAGACGGAGGAGCAC 60.080 63.158 0.00 0.00 0.00 4.40
3109 5561 1.284982 CGACGCAGGTGAAGTTGAGG 61.285 60.000 0.00 0.00 0.00 3.86
3528 5980 2.051166 GATCTCTACGGCGTCGGC 60.051 66.667 19.21 9.07 41.39 5.54
3529 5981 0.041135 GAAGATCTCTACGGCGTCGG 60.041 60.000 19.21 11.49 41.39 4.79
3530 5982 0.938713 AGAAGATCTCTACGGCGTCG 59.061 55.000 19.21 11.43 43.02 5.12
3531 5983 4.752661 ATAAGAAGATCTCTACGGCGTC 57.247 45.455 19.21 0.00 32.46 5.19
3532 5984 5.124138 CCATATAAGAAGATCTCTACGGCGT 59.876 44.000 19.64 19.64 32.46 5.68
3533 5985 5.124138 ACCATATAAGAAGATCTCTACGGCG 59.876 44.000 4.80 4.80 32.46 6.46
3534 5986 6.326375 CACCATATAAGAAGATCTCTACGGC 58.674 44.000 0.00 0.00 32.46 5.68
3535 5987 6.434652 ACCACCATATAAGAAGATCTCTACGG 59.565 42.308 0.00 0.00 32.46 4.02
3536 5988 7.455641 ACCACCATATAAGAAGATCTCTACG 57.544 40.000 0.00 0.00 32.46 3.51
3539 5991 9.440761 AGTTTACCACCATATAAGAAGATCTCT 57.559 33.333 0.00 0.00 35.13 3.10
3543 5995 9.726438 GCATAGTTTACCACCATATAAGAAGAT 57.274 33.333 0.00 0.00 0.00 2.40
3544 5996 8.710239 TGCATAGTTTACCACCATATAAGAAGA 58.290 33.333 0.00 0.00 0.00 2.87
3545 5997 8.902540 TGCATAGTTTACCACCATATAAGAAG 57.097 34.615 0.00 0.00 0.00 2.85
3547 5999 9.938280 GTATGCATAGTTTACCACCATATAAGA 57.062 33.333 6.67 0.00 0.00 2.10
3548 6000 9.719355 TGTATGCATAGTTTACCACCATATAAG 57.281 33.333 6.67 0.00 0.00 1.73
3551 6003 9.667107 GTATGTATGCATAGTTTACCACCATAT 57.333 33.333 6.67 0.00 38.17 1.78
3552 6004 8.652290 TGTATGTATGCATAGTTTACCACCATA 58.348 33.333 6.67 5.36 38.17 2.74
3553 6005 7.513856 TGTATGTATGCATAGTTTACCACCAT 58.486 34.615 6.67 6.31 38.17 3.55
3554 6006 6.890293 TGTATGTATGCATAGTTTACCACCA 58.110 36.000 6.67 0.00 38.17 4.17
3555 6007 7.979444 ATGTATGTATGCATAGTTTACCACC 57.021 36.000 6.67 0.00 38.17 4.61
3556 6008 8.644619 CGTATGTATGTATGCATAGTTTACCAC 58.355 37.037 6.67 8.74 38.17 4.16
3557 6009 8.361889 ACGTATGTATGTATGCATAGTTTACCA 58.638 33.333 6.67 0.47 38.17 3.25
3558 6010 8.752766 ACGTATGTATGTATGCATAGTTTACC 57.247 34.615 6.67 0.00 38.17 2.85
3563 6015 9.445878 AGTAGTACGTATGTATGTATGCATAGT 57.554 33.333 6.67 1.62 38.17 2.12
3586 6038 4.506288 CGCGGATCACAACAAATCATAGTA 59.494 41.667 0.00 0.00 0.00 1.82
3587 6039 3.309682 CGCGGATCACAACAAATCATAGT 59.690 43.478 0.00 0.00 0.00 2.12
3588 6040 3.309682 ACGCGGATCACAACAAATCATAG 59.690 43.478 12.47 0.00 0.00 2.23
3589 6041 3.266636 ACGCGGATCACAACAAATCATA 58.733 40.909 12.47 0.00 0.00 2.15
3592 6044 2.534150 CGTACGCGGATCACAACAAATC 60.534 50.000 12.47 0.00 0.00 2.17
3593 6045 1.392168 CGTACGCGGATCACAACAAAT 59.608 47.619 12.47 0.00 0.00 2.32
3594 6046 0.785378 CGTACGCGGATCACAACAAA 59.215 50.000 12.47 0.00 0.00 2.83
3596 6048 0.730155 GACGTACGCGGATCACAACA 60.730 55.000 16.72 0.00 43.45 3.33
3597 6049 1.726845 CGACGTACGCGGATCACAAC 61.727 60.000 16.72 0.00 43.45 3.32
3598 6050 1.512522 CGACGTACGCGGATCACAA 60.513 57.895 16.72 0.00 43.45 3.33
3599 6051 2.098871 CGACGTACGCGGATCACA 59.901 61.111 16.72 0.00 43.45 3.58
3600 6052 2.099062 ACGACGTACGCGGATCAC 59.901 61.111 26.91 1.34 46.94 3.06
3601 6053 2.098871 CACGACGTACGCGGATCA 59.901 61.111 26.91 0.00 46.94 2.92
3602 6054 2.649975 CCACGACGTACGCGGATC 60.650 66.667 26.91 13.47 45.74 3.36
3603 6055 3.434319 ACCACGACGTACGCGGAT 61.434 61.111 26.91 14.40 45.74 4.18
3604 6056 4.388080 CACCACGACGTACGCGGA 62.388 66.667 26.91 0.00 45.74 5.54
3606 6058 2.762672 TACACACCACGACGTACGCG 62.763 60.000 23.65 23.65 46.94 6.01
3607 6059 1.082169 TACACACCACGACGTACGC 60.082 57.895 16.72 7.41 46.94 4.42
3609 6061 0.725784 CGGTACACACCACGACGTAC 60.726 60.000 0.00 0.00 46.14 3.67
3610 6062 0.882484 TCGGTACACACCACGACGTA 60.882 55.000 0.00 0.00 46.14 3.57
3611 6063 2.186160 TCGGTACACACCACGACGT 61.186 57.895 0.00 0.00 46.14 4.34
3612 6064 1.727022 GTCGGTACACACCACGACG 60.727 63.158 4.70 0.00 46.14 5.12
3613 6065 4.233408 GTCGGTACACACCACGAC 57.767 61.111 4.70 4.70 46.14 4.34
3614 6066 2.906939 CGGTCGGTACACACCACGA 61.907 63.158 11.85 0.10 46.14 4.35
3615 6067 2.405061 TTCGGTCGGTACACACCACG 62.405 60.000 11.85 0.00 46.14 4.94
3618 6070 1.730547 CGTTCGGTCGGTACACACC 60.731 63.158 0.00 0.00 41.93 4.16
3619 6071 0.317770 TTCGTTCGGTCGGTACACAC 60.318 55.000 0.00 0.00 0.00 3.82
3620 6072 0.040157 CTTCGTTCGGTCGGTACACA 60.040 55.000 0.00 0.00 0.00 3.72
3621 6073 0.730494 CCTTCGTTCGGTCGGTACAC 60.730 60.000 0.00 0.00 0.00 2.90
3622 6074 1.172180 ACCTTCGTTCGGTCGGTACA 61.172 55.000 0.00 0.00 0.00 2.90
3623 6075 0.730494 CACCTTCGTTCGGTCGGTAC 60.730 60.000 1.08 0.00 30.82 3.34
3624 6076 1.580942 CACCTTCGTTCGGTCGGTA 59.419 57.895 1.08 0.00 30.82 4.02
3625 6077 2.337532 CACCTTCGTTCGGTCGGT 59.662 61.111 1.08 0.00 30.82 4.69
3626 6078 2.431942 CCACCTTCGTTCGGTCGG 60.432 66.667 1.08 0.00 30.82 4.79
3627 6079 2.424705 TTCCCACCTTCGTTCGGTCG 62.425 60.000 0.00 0.00 30.82 4.79
3628 6080 0.669625 CTTCCCACCTTCGTTCGGTC 60.670 60.000 0.00 0.00 30.82 4.79
3702 6158 2.747467 GCTATGCCATGGAAGCTTCAGA 60.747 50.000 27.02 13.78 32.18 3.27
3733 6189 2.867333 TTTGAGCTAGCGACGCCGAG 62.867 60.000 17.79 15.32 38.22 4.63
3746 6202 1.604593 TCCCCTGCAAGCTTTGAGC 60.605 57.895 0.00 0.00 42.84 4.26
3805 6266 5.008118 TCAGAGTATCGATCTTACAGTGCAG 59.992 44.000 0.00 0.00 42.67 4.41
3827 6288 3.067461 AGCAAGGCGTTACAACATTTTCA 59.933 39.130 0.00 0.00 0.00 2.69
3861 6322 6.072783 AGCTCTGTTCTTGATTTCACTTTAGC 60.073 38.462 0.00 0.00 0.00 3.09
3874 6339 0.795085 CTCGCCAAGCTCTGTTCTTG 59.205 55.000 0.00 0.00 40.31 3.02
3935 6652 9.241317 CAACCTGCAAAATGATCTTATATTGAC 57.759 33.333 0.00 0.00 0.00 3.18
3937 6654 9.590451 AACAACCTGCAAAATGATCTTATATTG 57.410 29.630 0.00 0.00 0.00 1.90
3949 6666 3.280197 AGCCAAAACAACCTGCAAAAT 57.720 38.095 0.00 0.00 0.00 1.82
3992 6709 9.558133 TCCCTTCATCTCATAATATCTTCATCT 57.442 33.333 0.00 0.00 0.00 2.90
3993 6710 9.820725 CTCCCTTCATCTCATAATATCTTCATC 57.179 37.037 0.00 0.00 0.00 2.92
3994 6711 9.336462 ACTCCCTTCATCTCATAATATCTTCAT 57.664 33.333 0.00 0.00 0.00 2.57
3995 6712 8.733092 ACTCCCTTCATCTCATAATATCTTCA 57.267 34.615 0.00 0.00 0.00 3.02
3998 6715 7.340743 CGGTACTCCCTTCATCTCATAATATCT 59.659 40.741 0.00 0.00 0.00 1.98
3999 6716 7.484975 CGGTACTCCCTTCATCTCATAATATC 58.515 42.308 0.00 0.00 0.00 1.63
4000 6717 6.127310 GCGGTACTCCCTTCATCTCATAATAT 60.127 42.308 0.00 0.00 0.00 1.28
4001 6718 5.185249 GCGGTACTCCCTTCATCTCATAATA 59.815 44.000 0.00 0.00 0.00 0.98
4033 6804 2.620779 AAGTCACTCAGTCGATGACG 57.379 50.000 9.74 0.00 45.97 4.35
4035 6806 4.580868 AGACTAAGTCACTCAGTCGATGA 58.419 43.478 2.16 0.00 42.80 2.92
4036 6807 4.634004 AGAGACTAAGTCACTCAGTCGATG 59.366 45.833 2.16 0.00 42.80 3.84
4037 6808 4.839121 AGAGACTAAGTCACTCAGTCGAT 58.161 43.478 2.16 0.00 42.80 3.59
4039 6810 4.593597 GAGAGACTAAGTCACTCAGTCG 57.406 50.000 2.16 0.00 45.11 4.18
4046 6839 5.392767 TGGTTGATGAGAGACTAAGTCAC 57.607 43.478 0.00 0.00 34.60 3.67
4055 6848 7.044181 GTGAAGATTGTATGGTTGATGAGAGA 58.956 38.462 0.00 0.00 0.00 3.10
4080 6873 1.329913 GGGGTAAAGCAGGCCATTGG 61.330 60.000 5.01 0.00 0.00 3.16
4084 6877 1.850289 TGAGGGGTAAAGCAGGCCA 60.850 57.895 5.01 0.00 0.00 5.36
4085 6878 1.378646 GTGAGGGGTAAAGCAGGCC 60.379 63.158 0.00 0.00 0.00 5.19
4087 6880 1.340114 GGAAGTGAGGGGTAAAGCAGG 60.340 57.143 0.00 0.00 0.00 4.85
4089 6882 0.696501 GGGAAGTGAGGGGTAAAGCA 59.303 55.000 0.00 0.00 0.00 3.91
4090 6883 0.696501 TGGGAAGTGAGGGGTAAAGC 59.303 55.000 0.00 0.00 0.00 3.51
4091 6884 1.985895 AGTGGGAAGTGAGGGGTAAAG 59.014 52.381 0.00 0.00 0.00 1.85
4092 6885 1.982958 GAGTGGGAAGTGAGGGGTAAA 59.017 52.381 0.00 0.00 0.00 2.01
4110 6908 9.793252 CATTCCATAAATTTACAGTTCTTGGAG 57.207 33.333 12.08 2.42 32.73 3.86
4111 6909 9.527157 TCATTCCATAAATTTACAGTTCTTGGA 57.473 29.630 9.41 9.41 0.00 3.53
4153 6954 6.516718 AGAGAGAGAGAGAGAGAGTATTTCG 58.483 44.000 0.00 0.00 0.00 3.46
4193 6994 4.871822 TGAGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
4195 6996 5.248248 TGTTTGAGAGAGAGAGAGAGAGAGA 59.752 44.000 0.00 0.00 0.00 3.10
4197 6998 5.221823 TGTGTTTGAGAGAGAGAGAGAGAGA 60.222 44.000 0.00 0.00 0.00 3.10
4199 7000 4.759693 GTGTGTTTGAGAGAGAGAGAGAGA 59.240 45.833 0.00 0.00 0.00 3.10
4201 7002 4.277174 GTGTGTGTTTGAGAGAGAGAGAGA 59.723 45.833 0.00 0.00 0.00 3.10
4203 7004 3.954258 TGTGTGTGTTTGAGAGAGAGAGA 59.046 43.478 0.00 0.00 0.00 3.10
4205 7006 3.447229 TGTGTGTGTGTTTGAGAGAGAGA 59.553 43.478 0.00 0.00 0.00 3.10
4207 7008 3.885724 TGTGTGTGTGTTTGAGAGAGA 57.114 42.857 0.00 0.00 0.00 3.10
4209 7010 4.260985 ACATTGTGTGTGTGTTTGAGAGA 58.739 39.130 0.00 0.00 40.28 3.10
4211 7012 5.064579 CACTACATTGTGTGTGTGTTTGAGA 59.935 40.000 13.26 0.00 42.24 3.27
4212 7013 5.265477 CACTACATTGTGTGTGTGTTTGAG 58.735 41.667 13.26 0.00 42.24 3.02
4213 7014 4.438065 GCACTACATTGTGTGTGTGTTTGA 60.438 41.667 18.96 0.00 42.24 2.69
4216 7017 2.031560 CGCACTACATTGTGTGTGTGTT 59.968 45.455 20.36 0.00 42.24 3.32
4451 7260 9.151471 CTTTTCATTTTTCATACTCTCTCCGTA 57.849 33.333 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.