Multiple sequence alignment - TraesCS4B01G338900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G338900 chr4B 100.000 5276 0 0 754 6029 631899433 631894158 0.000000e+00 9744.0
1 TraesCS4B01G338900 chr4B 84.505 1323 152 31 3294 4597 632123119 632121831 0.000000e+00 1258.0
2 TraesCS4B01G338900 chr4B 82.217 1344 121 56 754 2028 632125654 632124360 0.000000e+00 1050.0
3 TraesCS4B01G338900 chr4B 94.424 556 28 1 754 1309 631837621 631838173 0.000000e+00 852.0
4 TraesCS4B01G338900 chr4B 79.666 1318 162 45 2004 3280 632124354 632123102 0.000000e+00 852.0
5 TraesCS4B01G338900 chr4B 100.000 417 0 0 1 417 631900186 631899770 0.000000e+00 771.0
6 TraesCS4B01G338900 chr4B 81.658 965 127 25 3651 4597 632128798 632129730 0.000000e+00 756.0
7 TraesCS4B01G338900 chr4B 83.333 690 67 26 1695 2350 631838580 631839255 1.450000e-165 593.0
8 TraesCS4B01G338900 chr4B 94.667 75 3 1 1 74 631910568 631910642 1.370000e-21 115.0
9 TraesCS4B01G338900 chr4B 85.057 87 8 1 4779 4865 632121814 632121733 3.870000e-12 84.2
10 TraesCS4B01G338900 chr5A 92.643 5315 208 55 754 6029 673237841 673232671 0.000000e+00 7480.0
11 TraesCS4B01G338900 chr5A 86.632 965 71 32 754 1671 673185061 673186014 0.000000e+00 1014.0
12 TraesCS4B01G338900 chr5A 84.649 684 59 21 1695 2352 673186004 673186667 1.830000e-179 640.0
13 TraesCS4B01G338900 chr5A 85.075 402 51 9 5449 5848 416026696 416027090 9.410000e-108 401.0
14 TraesCS4B01G338900 chr5A 89.423 104 11 0 72 175 663224522 663224419 1.360000e-26 132.0
15 TraesCS4B01G338900 chr4D 93.556 1707 61 16 754 2443 493924124 493922450 0.000000e+00 2497.0
16 TraesCS4B01G338900 chr4D 85.725 1317 148 22 3294 4597 493909989 493911278 0.000000e+00 1354.0
17 TraesCS4B01G338900 chr4D 86.823 941 72 31 754 1656 493907553 493908479 0.000000e+00 1003.0
18 TraesCS4B01G338900 chr4D 83.642 917 105 19 1714 2606 493908472 493909367 0.000000e+00 821.0
19 TraesCS4B01G338900 chr4D 85.213 399 54 5 5447 5843 434981859 434981464 7.280000e-109 405.0
20 TraesCS4B01G338900 chr4D 86.207 87 7 1 4779 4865 493911295 493911376 8.320000e-14 89.8
21 TraesCS4B01G338900 chr4D 100.000 30 0 0 5009 5038 493911612 493911641 8.440000e-04 56.5
22 TraesCS4B01G338900 chr4D 96.875 32 1 0 386 417 493927838 493927807 3.000000e-03 54.7
23 TraesCS4B01G338900 chr2B 85.165 546 53 6 783 1312 540255849 540256382 8.890000e-148 534.0
24 TraesCS4B01G338900 chr2B 88.889 54 5 1 3917 3969 666484282 666484229 1.400000e-06 65.8
25 TraesCS4B01G338900 chr2B 91.489 47 3 1 3924 3969 666630770 666630816 5.040000e-06 63.9
26 TraesCS4B01G338900 chr3D 86.000 400 48 7 5451 5848 184141561 184141168 7.220000e-114 422.0
27 TraesCS4B01G338900 chr3D 85.075 402 46 9 5449 5848 155959666 155959277 1.220000e-106 398.0
28 TraesCS4B01G338900 chr6D 85.572 402 52 6 5451 5848 436731475 436731076 3.360000e-112 416.0
29 TraesCS4B01G338900 chr6D 83.117 231 32 5 71 300 469295405 469295629 2.850000e-48 204.0
30 TraesCS4B01G338900 chr6D 81.545 233 37 2 71 301 91239357 91239585 2.870000e-43 187.0
31 TraesCS4B01G338900 chr4A 86.154 390 49 5 5451 5838 552810629 552811015 3.360000e-112 416.0
32 TraesCS4B01G338900 chr4A 84.915 411 54 8 5440 5848 45107971 45107567 5.620000e-110 409.0
33 TraesCS4B01G338900 chr4A 84.375 224 31 1 81 304 641570783 641570564 3.660000e-52 217.0
34 TraesCS4B01G338900 chr5D 85.572 402 50 7 5451 5848 456803310 456802913 1.210000e-111 414.0
35 TraesCS4B01G338900 chr5D 85.714 231 29 1 71 301 232590698 232590924 2.170000e-59 241.0
36 TraesCS4B01G338900 chr5D 84.163 221 31 1 81 301 530495705 530495921 1.700000e-50 211.0
37 TraesCS4B01G338900 chr3B 85.786 401 42 11 5451 5844 7079817 7079425 1.560000e-110 411.0
38 TraesCS4B01G338900 chr2D 86.400 250 21 9 2110 2350 459104671 459104916 1.670000e-65 261.0
39 TraesCS4B01G338900 chr2D 79.399 233 38 5 71 299 643338474 643338248 8.090000e-34 156.0
40 TraesCS4B01G338900 chr2D 90.517 116 8 1 1993 2108 459046398 459046510 3.760000e-32 150.0
41 TraesCS4B01G338900 chr2D 97.468 79 1 1 809 886 459038080 459038158 3.790000e-27 134.0
42 TraesCS4B01G338900 chr2D 91.489 47 3 1 3924 3969 558201635 558201681 5.040000e-06 63.9
43 TraesCS4B01G338900 chr2D 97.059 34 1 0 3937 3970 557956120 557956087 2.350000e-04 58.4
44 TraesCS4B01G338900 chr1B 85.281 231 25 3 71 301 652273004 652273225 4.700000e-56 230.0
45 TraesCS4B01G338900 chr7B 83.902 205 28 2 71 275 126998874 126998675 2.220000e-44 191.0
46 TraesCS4B01G338900 chr2A 95.349 43 2 0 3924 3966 698784103 698784145 1.080000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G338900 chr4B 631894158 631900186 6028 True 5257.50 9744 100.00000 1 6029 2 chr4B.!!$R1 6028
1 TraesCS4B01G338900 chr4B 632121733 632125654 3921 True 811.05 1258 82.86125 754 4865 4 chr4B.!!$R2 4111
2 TraesCS4B01G338900 chr4B 632128798 632129730 932 False 756.00 756 81.65800 3651 4597 1 chr4B.!!$F2 946
3 TraesCS4B01G338900 chr4B 631837621 631839255 1634 False 722.50 852 88.87850 754 2350 2 chr4B.!!$F3 1596
4 TraesCS4B01G338900 chr5A 673232671 673237841 5170 True 7480.00 7480 92.64300 754 6029 1 chr5A.!!$R2 5275
5 TraesCS4B01G338900 chr5A 673185061 673186667 1606 False 827.00 1014 85.64050 754 2352 2 chr5A.!!$F2 1598
6 TraesCS4B01G338900 chr4D 493922450 493927838 5388 True 1275.85 2497 95.21550 386 2443 2 chr4D.!!$R2 2057
7 TraesCS4B01G338900 chr4D 493907553 493911641 4088 False 664.86 1354 88.47940 754 5038 5 chr4D.!!$F1 4284
8 TraesCS4B01G338900 chr2B 540255849 540256382 533 False 534.00 534 85.16500 783 1312 1 chr2B.!!$F1 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
213 214 0.028770 GCAAGCAAACACAGTGCGTA 59.971 50.0 0.00 0.0 46.86 4.42 F
354 355 0.179097 GGGCGTTTTCAAAAGTGGCA 60.179 50.0 9.88 0.0 0.00 4.92 F
1361 4755 0.184451 CCTGCCTGCCTGTCCATTAT 59.816 55.0 0.00 0.0 0.00 1.28 F
2624 6208 0.743688 TTGTGTCAGTGCGCCATTTT 59.256 45.0 4.18 0.0 0.00 1.82 F
3887 7511 0.179009 AGGTGCTCTTGCTGCTTCAA 60.179 50.0 0.00 0.0 40.48 2.69 F
4450 8090 0.250901 ACATGCCTCTGTTGTCACCC 60.251 55.0 0.00 0.0 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1743 5198 0.586802 GGTCTTGTTCCTTGACGTGC 59.413 55.000 0.00 0.00 0.00 5.34 R
1909 5379 1.301716 GTTGACGAAGGCAGCCTGA 60.302 57.895 17.05 0.00 32.13 3.86 R
2861 6449 1.831736 CAGACCGGGATAGTGGTTCTT 59.168 52.381 6.32 0.00 38.99 2.52 R
4295 7926 0.664166 GCCTCCACAATGCAAACGTG 60.664 55.000 0.00 0.00 0.00 4.49 R
4759 8407 0.100503 AAGGTGTGCGCAAAGTCAAC 59.899 50.000 14.00 9.02 0.00 3.18 R
6004 9774 0.179129 CATCCAAGCCCAACGCATTC 60.179 55.000 0.00 0.00 41.38 2.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.083997 CCGGGACCTGGGAGAAGG 61.084 72.222 12.12 0.00 43.57 3.46
18 19 3.787001 CGGGACCTGGGAGAAGGC 61.787 72.222 0.00 0.00 41.46 4.35
19 20 3.787001 GGGACCTGGGAGAAGGCG 61.787 72.222 0.00 0.00 41.46 5.52
20 21 3.787001 GGACCTGGGAGAAGGCGG 61.787 72.222 0.00 0.00 41.46 6.13
21 22 3.787001 GACCTGGGAGAAGGCGGG 61.787 72.222 0.00 0.00 41.46 6.13
24 25 3.474570 CTGGGAGAAGGCGGGGAG 61.475 72.222 0.00 0.00 0.00 4.30
50 51 4.899239 GGCGAGCCATGTCGGGAG 62.899 72.222 9.58 0.00 40.44 4.30
51 52 3.838271 GCGAGCCATGTCGGGAGA 61.838 66.667 7.71 0.00 40.44 3.71
63 64 4.716977 GGGAGACCGGGGGTGAGT 62.717 72.222 6.32 0.00 43.64 3.41
64 65 3.075641 GGAGACCGGGGGTGAGTC 61.076 72.222 6.32 0.00 35.25 3.36
65 66 3.075641 GAGACCGGGGGTGAGTCC 61.076 72.222 6.32 0.00 35.25 3.85
66 67 3.602030 AGACCGGGGGTGAGTCCT 61.602 66.667 6.32 0.00 35.25 3.85
67 68 2.220786 GAGACCGGGGGTGAGTCCTA 62.221 65.000 6.32 0.00 35.25 2.94
68 69 1.075450 GACCGGGGGTGAGTCCTAT 60.075 63.158 6.32 0.00 35.25 2.57
69 70 1.382695 ACCGGGGGTGAGTCCTATG 60.383 63.158 6.32 0.00 32.98 2.23
70 71 2.140792 CCGGGGGTGAGTCCTATGG 61.141 68.421 0.00 0.00 36.25 2.74
71 72 2.140792 CGGGGGTGAGTCCTATGGG 61.141 68.421 0.00 0.00 36.25 4.00
72 73 1.004361 GGGGGTGAGTCCTATGGGT 59.996 63.158 0.00 0.00 36.25 4.51
73 74 1.345715 GGGGGTGAGTCCTATGGGTG 61.346 65.000 0.00 0.00 36.25 4.61
74 75 0.620700 GGGGTGAGTCCTATGGGTGT 60.621 60.000 0.00 0.00 36.25 4.16
75 76 0.541863 GGGTGAGTCCTATGGGTGTG 59.458 60.000 0.00 0.00 36.25 3.82
76 77 1.568504 GGTGAGTCCTATGGGTGTGA 58.431 55.000 0.00 0.00 0.00 3.58
77 78 1.207329 GGTGAGTCCTATGGGTGTGAC 59.793 57.143 0.00 0.00 0.00 3.67
78 79 1.207329 GTGAGTCCTATGGGTGTGACC 59.793 57.143 0.00 0.00 37.60 4.02
79 80 0.460311 GAGTCCTATGGGTGTGACCG 59.540 60.000 0.00 0.00 39.83 4.79
80 81 0.252103 AGTCCTATGGGTGTGACCGT 60.252 55.000 0.00 0.00 39.83 4.83
81 82 0.108329 GTCCTATGGGTGTGACCGTG 60.108 60.000 0.00 0.00 39.83 4.94
82 83 0.543410 TCCTATGGGTGTGACCGTGT 60.543 55.000 0.00 0.00 39.83 4.49
83 84 0.391130 CCTATGGGTGTGACCGTGTG 60.391 60.000 0.00 0.00 39.83 3.82
84 85 0.320374 CTATGGGTGTGACCGTGTGT 59.680 55.000 0.00 0.00 39.83 3.72
85 86 1.546923 CTATGGGTGTGACCGTGTGTA 59.453 52.381 0.00 0.00 39.83 2.90
86 87 0.759959 ATGGGTGTGACCGTGTGTAA 59.240 50.000 0.00 0.00 39.83 2.41
87 88 0.105224 TGGGTGTGACCGTGTGTAAG 59.895 55.000 0.00 0.00 39.83 2.34
88 89 0.601841 GGGTGTGACCGTGTGTAAGG 60.602 60.000 0.00 0.00 39.83 2.69
89 90 0.105408 GGTGTGACCGTGTGTAAGGT 59.895 55.000 0.00 0.00 41.62 3.50
90 91 1.214367 GTGTGACCGTGTGTAAGGTG 58.786 55.000 0.00 0.00 38.87 4.00
91 92 0.825410 TGTGACCGTGTGTAAGGTGT 59.175 50.000 0.00 0.00 38.87 4.16
92 93 2.030371 TGTGACCGTGTGTAAGGTGTA 58.970 47.619 0.00 0.00 38.87 2.90
93 94 2.034939 TGTGACCGTGTGTAAGGTGTAG 59.965 50.000 0.00 0.00 38.87 2.74
94 95 1.000060 TGACCGTGTGTAAGGTGTAGC 60.000 52.381 0.00 0.00 38.87 3.58
95 96 1.000060 GACCGTGTGTAAGGTGTAGCA 60.000 52.381 0.00 0.00 38.87 3.49
96 97 1.000506 ACCGTGTGTAAGGTGTAGCAG 59.999 52.381 0.00 0.00 37.29 4.24
97 98 1.000506 CCGTGTGTAAGGTGTAGCAGT 59.999 52.381 0.00 0.00 0.00 4.40
98 99 2.229543 CCGTGTGTAAGGTGTAGCAGTA 59.770 50.000 0.00 0.00 0.00 2.74
99 100 3.499048 CGTGTGTAAGGTGTAGCAGTAG 58.501 50.000 0.00 0.00 0.00 2.57
100 101 3.057736 CGTGTGTAAGGTGTAGCAGTAGT 60.058 47.826 0.00 0.00 0.00 2.73
101 102 4.235360 GTGTGTAAGGTGTAGCAGTAGTG 58.765 47.826 0.00 0.00 0.00 2.74
102 103 3.257375 TGTGTAAGGTGTAGCAGTAGTGG 59.743 47.826 0.00 0.00 0.00 4.00
103 104 2.829720 TGTAAGGTGTAGCAGTAGTGGG 59.170 50.000 0.00 0.00 0.00 4.61
104 105 2.025636 AAGGTGTAGCAGTAGTGGGT 57.974 50.000 0.00 0.00 0.00 4.51
105 106 2.913603 AGGTGTAGCAGTAGTGGGTA 57.086 50.000 0.00 0.00 0.00 3.69
106 107 3.179902 AGGTGTAGCAGTAGTGGGTAA 57.820 47.619 0.00 0.00 0.00 2.85
107 108 3.097614 AGGTGTAGCAGTAGTGGGTAAG 58.902 50.000 0.00 0.00 0.00 2.34
108 109 2.418334 GGTGTAGCAGTAGTGGGTAAGC 60.418 54.545 0.00 0.00 0.00 3.09
109 110 2.496470 GTGTAGCAGTAGTGGGTAAGCT 59.504 50.000 0.00 0.00 36.20 3.74
110 111 2.758979 TGTAGCAGTAGTGGGTAAGCTC 59.241 50.000 0.00 0.00 33.83 4.09
111 112 1.938585 AGCAGTAGTGGGTAAGCTCA 58.061 50.000 0.00 0.00 0.00 4.26
112 113 1.550976 AGCAGTAGTGGGTAAGCTCAC 59.449 52.381 0.00 0.00 46.22 3.51
119 120 2.973945 GTGGGTAAGCTCACCAAGTAG 58.026 52.381 8.72 0.00 40.15 2.57
120 121 2.302157 GTGGGTAAGCTCACCAAGTAGT 59.698 50.000 8.72 0.00 40.15 2.73
121 122 2.976882 TGGGTAAGCTCACCAAGTAGTT 59.023 45.455 8.72 0.00 40.65 2.24
122 123 3.393278 TGGGTAAGCTCACCAAGTAGTTT 59.607 43.478 8.72 0.00 40.65 2.66
123 124 4.594062 TGGGTAAGCTCACCAAGTAGTTTA 59.406 41.667 8.72 0.00 40.65 2.01
124 125 5.249852 TGGGTAAGCTCACCAAGTAGTTTAT 59.750 40.000 8.72 0.00 40.65 1.40
125 126 6.441284 TGGGTAAGCTCACCAAGTAGTTTATA 59.559 38.462 8.72 0.00 40.65 0.98
126 127 7.038160 TGGGTAAGCTCACCAAGTAGTTTATAA 60.038 37.037 8.72 0.00 40.65 0.98
127 128 7.494952 GGGTAAGCTCACCAAGTAGTTTATAAG 59.505 40.741 8.72 0.00 40.65 1.73
128 129 7.494952 GGTAAGCTCACCAAGTAGTTTATAAGG 59.505 40.741 0.00 0.00 38.55 2.69
129 130 6.622427 AGCTCACCAAGTAGTTTATAAGGT 57.378 37.500 0.00 0.00 0.00 3.50
130 131 6.407202 AGCTCACCAAGTAGTTTATAAGGTG 58.593 40.000 10.19 10.19 44.76 4.00
133 134 7.549147 TCACCAAGTAGTTTATAAGGTGAGT 57.451 36.000 13.61 0.00 46.38 3.41
134 135 8.654485 TCACCAAGTAGTTTATAAGGTGAGTA 57.346 34.615 13.61 0.00 46.38 2.59
135 136 8.526147 TCACCAAGTAGTTTATAAGGTGAGTAC 58.474 37.037 13.61 4.71 46.38 2.73
136 137 8.308931 CACCAAGTAGTTTATAAGGTGAGTACA 58.691 37.037 10.74 0.00 45.92 2.90
137 138 8.873144 ACCAAGTAGTTTATAAGGTGAGTACAA 58.127 33.333 0.00 0.00 0.00 2.41
138 139 9.148104 CCAAGTAGTTTATAAGGTGAGTACAAC 57.852 37.037 0.00 0.00 0.00 3.32
141 142 9.531158 AGTAGTTTATAAGGTGAGTACAACTCT 57.469 33.333 8.42 0.00 43.96 3.24
145 146 9.032420 GTTTATAAGGTGAGTACAACTCTATGC 57.968 37.037 8.42 0.00 43.96 3.14
146 147 8.534954 TTATAAGGTGAGTACAACTCTATGCT 57.465 34.615 8.42 0.00 43.96 3.79
147 148 4.993029 AGGTGAGTACAACTCTATGCTC 57.007 45.455 8.42 0.00 45.27 4.26
148 149 3.378742 AGGTGAGTACAACTCTATGCTCG 59.621 47.826 8.42 0.00 45.27 5.03
149 150 3.128938 GGTGAGTACAACTCTATGCTCGT 59.871 47.826 8.42 0.00 45.27 4.18
150 151 4.334759 GGTGAGTACAACTCTATGCTCGTA 59.665 45.833 8.42 0.00 45.27 3.43
151 152 5.008811 GGTGAGTACAACTCTATGCTCGTAT 59.991 44.000 8.42 0.00 45.27 3.06
152 153 5.910166 GTGAGTACAACTCTATGCTCGTATG 59.090 44.000 8.42 0.00 45.27 2.39
153 154 4.861210 AGTACAACTCTATGCTCGTATGC 58.139 43.478 0.00 0.00 0.00 3.14
154 155 5.505819 GAGTACAACTCTATGCTCGTATGCA 60.506 44.000 0.00 0.00 43.31 3.96
155 156 4.123497 ACAACTCTATGCTCGTATGCAA 57.877 40.909 0.00 0.00 46.61 4.08
156 157 3.865745 ACAACTCTATGCTCGTATGCAAC 59.134 43.478 0.00 0.00 46.61 4.17
157 158 3.099267 ACTCTATGCTCGTATGCAACC 57.901 47.619 0.00 0.00 46.61 3.77
158 159 2.430694 ACTCTATGCTCGTATGCAACCA 59.569 45.455 0.00 0.00 46.61 3.67
159 160 3.118775 ACTCTATGCTCGTATGCAACCAA 60.119 43.478 0.00 0.00 46.61 3.67
160 161 3.867857 TCTATGCTCGTATGCAACCAAA 58.132 40.909 0.00 0.00 46.61 3.28
161 162 2.919666 ATGCTCGTATGCAACCAAAC 57.080 45.000 0.00 0.00 46.61 2.93
162 163 1.598882 TGCTCGTATGCAACCAAACA 58.401 45.000 0.00 0.00 40.29 2.83
163 164 1.950216 TGCTCGTATGCAACCAAACAA 59.050 42.857 0.00 0.00 40.29 2.83
164 165 2.287308 TGCTCGTATGCAACCAAACAAC 60.287 45.455 0.00 0.00 40.29 3.32
165 166 2.570169 CTCGTATGCAACCAAACAACG 58.430 47.619 0.00 0.00 0.00 4.10
166 167 1.941294 TCGTATGCAACCAAACAACGT 59.059 42.857 0.00 0.00 0.00 3.99
167 168 2.040524 CGTATGCAACCAAACAACGTG 58.959 47.619 0.00 0.00 0.00 4.49
168 169 1.784283 GTATGCAACCAAACAACGTGC 59.216 47.619 0.00 0.00 0.00 5.34
169 170 0.174389 ATGCAACCAAACAACGTGCA 59.826 45.000 0.00 0.00 35.24 4.57
170 171 0.734253 TGCAACCAAACAACGTGCAC 60.734 50.000 6.82 6.82 0.00 4.57
171 172 0.457681 GCAACCAAACAACGTGCACT 60.458 50.000 16.19 0.00 0.00 4.40
172 173 1.544686 CAACCAAACAACGTGCACTC 58.455 50.000 16.19 0.00 0.00 3.51
173 174 0.098025 AACCAAACAACGTGCACTCG 59.902 50.000 16.19 5.07 0.00 4.18
174 175 1.022451 ACCAAACAACGTGCACTCGT 61.022 50.000 16.19 5.82 46.19 4.18
175 176 0.588730 CCAAACAACGTGCACTCGTG 60.589 55.000 16.19 12.03 43.38 4.35
176 177 0.096281 CAAACAACGTGCACTCGTGT 59.904 50.000 16.19 12.68 43.38 4.49
177 178 0.096281 AAACAACGTGCACTCGTGTG 59.904 50.000 16.19 13.13 43.38 3.82
178 179 0.738063 AACAACGTGCACTCGTGTGA 60.738 50.000 21.06 3.99 46.55 3.58
179 180 1.272715 CAACGTGCACTCGTGTGAC 59.727 57.895 21.06 13.95 46.55 3.67
180 181 1.153726 AACGTGCACTCGTGTGACA 60.154 52.632 21.06 14.58 46.55 3.58
181 182 0.738063 AACGTGCACTCGTGTGACAA 60.738 50.000 21.06 3.16 46.55 3.18
182 183 1.145759 ACGTGCACTCGTGTGACAAG 61.146 55.000 21.06 19.33 46.55 3.16
183 184 0.869880 CGTGCACTCGTGTGACAAGA 60.870 55.000 21.06 0.59 46.55 3.02
184 185 1.502231 GTGCACTCGTGTGACAAGAT 58.498 50.000 21.06 0.00 46.55 2.40
185 186 2.672714 GTGCACTCGTGTGACAAGATA 58.327 47.619 21.06 0.00 46.55 1.98
186 187 2.408704 GTGCACTCGTGTGACAAGATAC 59.591 50.000 21.06 1.67 46.55 2.24
187 188 2.035321 TGCACTCGTGTGACAAGATACA 59.965 45.455 21.06 4.24 46.55 2.29
188 189 3.057019 GCACTCGTGTGACAAGATACAA 58.943 45.455 21.06 0.00 46.55 2.41
189 190 3.679980 GCACTCGTGTGACAAGATACAAT 59.320 43.478 21.06 0.00 46.55 2.71
190 191 4.434725 GCACTCGTGTGACAAGATACAATG 60.435 45.833 21.06 0.00 46.55 2.82
191 192 4.686091 CACTCGTGTGACAAGATACAATGT 59.314 41.667 12.15 0.00 46.55 2.71
192 193 4.923871 ACTCGTGTGACAAGATACAATGTC 59.076 41.667 0.93 0.00 44.84 3.06
199 200 4.656041 GACAAGATACAATGTCAGCAAGC 58.344 43.478 0.00 0.00 44.19 4.01
200 201 4.074259 ACAAGATACAATGTCAGCAAGCA 58.926 39.130 0.00 0.00 0.00 3.91
201 202 4.520111 ACAAGATACAATGTCAGCAAGCAA 59.480 37.500 0.00 0.00 0.00 3.91
202 203 5.009911 ACAAGATACAATGTCAGCAAGCAAA 59.990 36.000 0.00 0.00 0.00 3.68
203 204 5.051891 AGATACAATGTCAGCAAGCAAAC 57.948 39.130 0.00 0.00 0.00 2.93
204 205 4.520111 AGATACAATGTCAGCAAGCAAACA 59.480 37.500 0.00 0.00 0.00 2.83
205 206 2.813061 ACAATGTCAGCAAGCAAACAC 58.187 42.857 2.33 0.00 0.00 3.32
206 207 2.166050 ACAATGTCAGCAAGCAAACACA 59.834 40.909 2.33 0.00 0.00 3.72
207 208 2.787601 ATGTCAGCAAGCAAACACAG 57.212 45.000 2.33 0.00 0.00 3.66
208 209 1.462616 TGTCAGCAAGCAAACACAGT 58.537 45.000 0.00 0.00 0.00 3.55
209 210 1.132834 TGTCAGCAAGCAAACACAGTG 59.867 47.619 0.00 0.00 0.00 3.66
210 211 0.101040 TCAGCAAGCAAACACAGTGC 59.899 50.000 0.00 0.00 42.55 4.40
211 212 1.064621 AGCAAGCAAACACAGTGCG 59.935 52.632 0.00 0.00 46.86 5.34
212 213 1.226660 GCAAGCAAACACAGTGCGT 60.227 52.632 0.00 0.00 46.86 5.24
213 214 0.028770 GCAAGCAAACACAGTGCGTA 59.971 50.000 0.00 0.00 46.86 4.42
214 215 1.921573 GCAAGCAAACACAGTGCGTAG 60.922 52.381 0.00 0.00 46.86 3.51
215 216 1.597195 CAAGCAAACACAGTGCGTAGA 59.403 47.619 0.00 0.00 46.86 2.59
216 217 2.169832 AGCAAACACAGTGCGTAGAT 57.830 45.000 0.00 0.00 46.86 1.98
217 218 1.800586 AGCAAACACAGTGCGTAGATG 59.199 47.619 0.00 0.00 46.86 2.90
218 219 1.725931 GCAAACACAGTGCGTAGATGC 60.726 52.381 0.00 0.00 31.20 3.91
219 220 0.790207 AAACACAGTGCGTAGATGCG 59.210 50.000 0.00 0.00 37.81 4.73
220 221 0.319555 AACACAGTGCGTAGATGCGT 60.320 50.000 0.00 0.00 37.81 5.24
221 222 0.732880 ACACAGTGCGTAGATGCGTC 60.733 55.000 0.00 0.00 37.81 5.19
222 223 1.514228 ACAGTGCGTAGATGCGTCG 60.514 57.895 0.00 0.00 37.81 5.12
226 227 3.977568 GCGTAGATGCGTCGCTGC 61.978 66.667 19.50 10.16 45.29 5.25
227 228 3.672397 CGTAGATGCGTCGCTGCG 61.672 66.667 19.50 17.25 37.81 5.18
228 229 2.277949 GTAGATGCGTCGCTGCGA 60.278 61.111 22.24 22.24 37.81 5.10
229 230 1.658717 GTAGATGCGTCGCTGCGAT 60.659 57.895 28.51 12.18 38.42 4.58
230 231 1.658409 TAGATGCGTCGCTGCGATG 60.658 57.895 33.24 33.24 44.52 3.84
241 242 4.344237 TGCGATGCAGAGAGAGGA 57.656 55.556 0.00 0.00 33.32 3.71
242 243 2.818111 TGCGATGCAGAGAGAGGAT 58.182 52.632 0.00 0.00 33.32 3.24
243 244 1.986882 TGCGATGCAGAGAGAGGATA 58.013 50.000 0.00 0.00 33.32 2.59
244 245 2.523245 TGCGATGCAGAGAGAGGATAT 58.477 47.619 0.00 0.00 33.32 1.63
245 246 2.230750 TGCGATGCAGAGAGAGGATATG 59.769 50.000 0.00 0.00 33.32 1.78
246 247 2.878580 CGATGCAGAGAGAGGATATGC 58.121 52.381 0.00 0.00 37.40 3.14
249 250 1.969208 TGCAGAGAGAGGATATGCAGG 59.031 52.381 0.00 0.00 41.65 4.85
250 251 1.338011 GCAGAGAGAGGATATGCAGGC 60.338 57.143 0.00 0.00 36.88 4.85
251 252 1.969208 CAGAGAGAGGATATGCAGGCA 59.031 52.381 0.00 0.00 0.00 4.75
252 253 2.367894 CAGAGAGAGGATATGCAGGCAA 59.632 50.000 0.00 0.00 0.00 4.52
253 254 2.368221 AGAGAGAGGATATGCAGGCAAC 59.632 50.000 0.00 0.00 0.00 4.17
254 255 1.419387 AGAGAGGATATGCAGGCAACC 59.581 52.381 0.00 2.90 37.17 3.77
255 256 1.141657 GAGAGGATATGCAGGCAACCA 59.858 52.381 14.41 0.00 37.17 3.67
256 257 1.565759 AGAGGATATGCAGGCAACCAA 59.434 47.619 14.41 0.00 37.17 3.67
257 258 1.678101 GAGGATATGCAGGCAACCAAC 59.322 52.381 14.41 7.25 37.17 3.77
258 259 0.746659 GGATATGCAGGCAACCAACC 59.253 55.000 0.00 0.00 37.17 3.77
259 260 1.473258 GATATGCAGGCAACCAACCA 58.527 50.000 0.00 0.00 37.17 3.67
260 261 1.824230 GATATGCAGGCAACCAACCAA 59.176 47.619 0.00 0.00 37.17 3.67
261 262 1.935799 TATGCAGGCAACCAACCAAT 58.064 45.000 0.00 0.00 37.17 3.16
262 263 0.609662 ATGCAGGCAACCAACCAATC 59.390 50.000 0.00 0.00 37.17 2.67
263 264 0.758310 TGCAGGCAACCAACCAATCA 60.758 50.000 0.00 0.00 37.17 2.57
264 265 0.392336 GCAGGCAACCAACCAATCAA 59.608 50.000 0.00 0.00 37.17 2.57
265 266 1.873486 GCAGGCAACCAACCAATCAAC 60.873 52.381 0.00 0.00 37.17 3.18
266 267 1.411977 CAGGCAACCAACCAATCAACA 59.588 47.619 0.00 0.00 37.17 3.33
267 268 2.037511 CAGGCAACCAACCAATCAACAT 59.962 45.455 0.00 0.00 37.17 2.71
268 269 2.037511 AGGCAACCAACCAATCAACATG 59.962 45.455 0.00 0.00 37.17 3.21
269 270 2.415776 GCAACCAACCAATCAACATGG 58.584 47.619 0.00 0.00 43.84 3.66
270 271 2.036992 GCAACCAACCAATCAACATGGA 59.963 45.455 0.00 0.00 40.56 3.41
271 272 3.306919 GCAACCAACCAATCAACATGGAT 60.307 43.478 0.00 0.00 40.56 3.41
272 273 4.081752 GCAACCAACCAATCAACATGGATA 60.082 41.667 0.00 0.00 40.56 2.59
273 274 5.395546 GCAACCAACCAATCAACATGGATAT 60.396 40.000 0.00 0.00 40.56 1.63
274 275 5.857471 ACCAACCAATCAACATGGATATG 57.143 39.130 0.00 0.00 40.56 1.78
302 303 5.621197 TTTTTACGTGCATATGCTCAAGT 57.379 34.783 27.13 21.20 42.66 3.16
303 304 6.729391 TTTTTACGTGCATATGCTCAAGTA 57.271 33.333 27.13 20.33 42.66 2.24
304 305 6.918892 TTTTACGTGCATATGCTCAAGTAT 57.081 33.333 27.13 10.07 42.66 2.12
305 306 6.525121 TTTACGTGCATATGCTCAAGTATC 57.475 37.500 27.13 7.65 42.66 2.24
306 307 3.393800 ACGTGCATATGCTCAAGTATCC 58.606 45.455 27.13 4.54 42.66 2.59
307 308 3.070159 ACGTGCATATGCTCAAGTATCCT 59.930 43.478 27.13 0.00 42.66 3.24
308 309 4.280929 ACGTGCATATGCTCAAGTATCCTA 59.719 41.667 27.13 0.47 42.66 2.94
309 310 4.861462 CGTGCATATGCTCAAGTATCCTAG 59.139 45.833 27.13 4.70 42.66 3.02
310 311 5.565637 CGTGCATATGCTCAAGTATCCTAGT 60.566 44.000 27.13 0.00 42.66 2.57
311 312 5.866633 GTGCATATGCTCAAGTATCCTAGTC 59.133 44.000 27.13 0.00 42.66 2.59
312 313 5.777223 TGCATATGCTCAAGTATCCTAGTCT 59.223 40.000 27.13 0.00 42.66 3.24
313 314 6.071672 TGCATATGCTCAAGTATCCTAGTCTC 60.072 42.308 27.13 0.00 42.66 3.36
314 315 6.550843 CATATGCTCAAGTATCCTAGTCTCG 58.449 44.000 0.00 0.00 0.00 4.04
315 316 3.887352 TGCTCAAGTATCCTAGTCTCGT 58.113 45.455 0.00 0.00 0.00 4.18
316 317 3.878103 TGCTCAAGTATCCTAGTCTCGTC 59.122 47.826 0.00 0.00 0.00 4.20
317 318 3.878103 GCTCAAGTATCCTAGTCTCGTCA 59.122 47.826 0.00 0.00 0.00 4.35
318 319 4.335874 GCTCAAGTATCCTAGTCTCGTCAA 59.664 45.833 0.00 0.00 0.00 3.18
319 320 5.009210 GCTCAAGTATCCTAGTCTCGTCAAT 59.991 44.000 0.00 0.00 0.00 2.57
320 321 6.378710 TCAAGTATCCTAGTCTCGTCAATG 57.621 41.667 0.00 0.00 0.00 2.82
321 322 6.120220 TCAAGTATCCTAGTCTCGTCAATGA 58.880 40.000 0.00 0.00 0.00 2.57
322 323 6.602009 TCAAGTATCCTAGTCTCGTCAATGAA 59.398 38.462 0.00 0.00 0.00 2.57
323 324 7.122204 TCAAGTATCCTAGTCTCGTCAATGAAA 59.878 37.037 0.00 0.00 0.00 2.69
324 325 7.033530 AGTATCCTAGTCTCGTCAATGAAAG 57.966 40.000 0.00 0.00 0.00 2.62
325 326 6.829298 AGTATCCTAGTCTCGTCAATGAAAGA 59.171 38.462 0.00 0.00 0.00 2.52
326 327 5.977489 TCCTAGTCTCGTCAATGAAAGAA 57.023 39.130 0.00 0.00 0.00 2.52
327 328 6.340962 TCCTAGTCTCGTCAATGAAAGAAA 57.659 37.500 0.00 0.00 0.00 2.52
328 329 6.390721 TCCTAGTCTCGTCAATGAAAGAAAG 58.609 40.000 0.00 1.29 0.00 2.62
329 330 6.208797 TCCTAGTCTCGTCAATGAAAGAAAGA 59.791 38.462 0.00 0.00 0.00 2.52
330 331 6.529829 CCTAGTCTCGTCAATGAAAGAAAGAG 59.470 42.308 0.00 0.00 0.00 2.85
331 332 6.090483 AGTCTCGTCAATGAAAGAAAGAGA 57.910 37.500 0.00 0.00 32.37 3.10
332 333 6.155827 AGTCTCGTCAATGAAAGAAAGAGAG 58.844 40.000 0.00 0.00 34.17 3.20
333 334 6.015856 AGTCTCGTCAATGAAAGAAAGAGAGA 60.016 38.462 0.00 0.00 34.17 3.10
334 335 6.307800 GTCTCGTCAATGAAAGAAAGAGAGAG 59.692 42.308 0.00 0.00 34.17 3.20
335 336 5.473931 TCGTCAATGAAAGAAAGAGAGAGG 58.526 41.667 0.00 0.00 0.00 3.69
336 337 4.629200 CGTCAATGAAAGAAAGAGAGAGGG 59.371 45.833 0.00 0.00 0.00 4.30
337 338 4.940654 GTCAATGAAAGAAAGAGAGAGGGG 59.059 45.833 0.00 0.00 0.00 4.79
338 339 3.643199 ATGAAAGAAAGAGAGAGGGGC 57.357 47.619 0.00 0.00 0.00 5.80
339 340 1.276421 TGAAAGAAAGAGAGAGGGGCG 59.724 52.381 0.00 0.00 0.00 6.13
340 341 1.276705 GAAAGAAAGAGAGAGGGGCGT 59.723 52.381 0.00 0.00 0.00 5.68
341 342 1.353091 AAGAAAGAGAGAGGGGCGTT 58.647 50.000 0.00 0.00 0.00 4.84
342 343 1.353091 AGAAAGAGAGAGGGGCGTTT 58.647 50.000 0.00 0.00 0.00 3.60
343 344 1.700186 AGAAAGAGAGAGGGGCGTTTT 59.300 47.619 0.00 0.00 0.00 2.43
344 345 2.077627 GAAAGAGAGAGGGGCGTTTTC 58.922 52.381 0.00 0.00 0.00 2.29
345 346 1.056660 AAGAGAGAGGGGCGTTTTCA 58.943 50.000 0.00 0.00 0.00 2.69
346 347 1.056660 AGAGAGAGGGGCGTTTTCAA 58.943 50.000 0.00 0.00 0.00 2.69
347 348 1.420138 AGAGAGAGGGGCGTTTTCAAA 59.580 47.619 0.00 0.00 0.00 2.69
348 349 2.158667 AGAGAGAGGGGCGTTTTCAAAA 60.159 45.455 0.00 0.00 0.00 2.44
349 350 2.226674 GAGAGAGGGGCGTTTTCAAAAG 59.773 50.000 0.00 0.00 0.00 2.27
350 351 1.954382 GAGAGGGGCGTTTTCAAAAGT 59.046 47.619 0.00 0.00 0.00 2.66
351 352 1.681264 AGAGGGGCGTTTTCAAAAGTG 59.319 47.619 0.00 0.00 0.00 3.16
352 353 0.750249 AGGGGCGTTTTCAAAAGTGG 59.250 50.000 0.00 0.00 0.00 4.00
353 354 0.878523 GGGGCGTTTTCAAAAGTGGC 60.879 55.000 1.07 1.07 0.00 5.01
354 355 0.179097 GGGCGTTTTCAAAAGTGGCA 60.179 50.000 9.88 0.00 0.00 4.92
355 356 0.927537 GGCGTTTTCAAAAGTGGCAC 59.072 50.000 10.29 10.29 0.00 5.01
356 357 1.634702 GCGTTTTCAAAAGTGGCACA 58.365 45.000 21.41 0.00 0.00 4.57
357 358 1.996191 GCGTTTTCAAAAGTGGCACAA 59.004 42.857 21.41 1.33 44.16 3.33
358 359 2.029124 GCGTTTTCAAAAGTGGCACAAG 59.971 45.455 21.41 6.36 44.16 3.16
359 360 2.602660 CGTTTTCAAAAGTGGCACAAGG 59.397 45.455 21.41 6.34 44.16 3.61
360 361 2.935849 GTTTTCAAAAGTGGCACAAGGG 59.064 45.455 21.41 6.72 44.16 3.95
361 362 2.151502 TTCAAAAGTGGCACAAGGGA 57.848 45.000 21.41 9.09 44.16 4.20
362 363 1.398692 TCAAAAGTGGCACAAGGGAC 58.601 50.000 21.41 0.00 44.16 4.46
363 364 0.389025 CAAAAGTGGCACAAGGGACC 59.611 55.000 21.41 0.00 44.16 4.46
364 365 0.261696 AAAAGTGGCACAAGGGACCT 59.738 50.000 21.41 0.00 44.16 3.85
365 366 0.468029 AAAGTGGCACAAGGGACCTG 60.468 55.000 21.41 0.00 44.16 4.00
366 367 1.645402 AAGTGGCACAAGGGACCTGT 61.645 55.000 21.41 0.00 44.16 4.00
367 368 1.600916 GTGGCACAAGGGACCTGTC 60.601 63.158 13.86 0.00 44.16 3.51
368 369 2.829384 TGGCACAAGGGACCTGTCC 61.829 63.158 7.84 7.84 42.52 4.02
377 378 3.069778 GACCTGTCCACCTGGGTC 58.930 66.667 0.00 0.00 40.86 4.46
378 379 1.536662 GACCTGTCCACCTGGGTCT 60.537 63.158 0.00 0.00 43.30 3.85
379 380 1.831652 GACCTGTCCACCTGGGTCTG 61.832 65.000 0.00 0.00 43.30 3.51
380 381 2.596851 CCTGTCCACCTGGGTCTGG 61.597 68.421 0.00 0.00 37.43 3.86
381 382 2.529136 TGTCCACCTGGGTCTGGG 60.529 66.667 0.00 0.00 38.11 4.45
382 383 2.529389 GTCCACCTGGGTCTGGGT 60.529 66.667 0.00 0.00 38.11 4.51
954 4332 4.225703 GGCCGCCATTGCCCAATC 62.226 66.667 3.91 0.00 43.33 2.67
955 4333 4.225703 GCCGCCATTGCCCAATCC 62.226 66.667 0.00 0.00 0.00 3.01
956 4334 2.759149 CCGCCATTGCCCAATCCA 60.759 61.111 0.00 0.00 0.00 3.41
957 4335 2.135581 CCGCCATTGCCCAATCCAT 61.136 57.895 0.00 0.00 0.00 3.41
1029 4407 4.063967 CACCTGTCGCGGCTGGTA 62.064 66.667 36.67 4.96 38.40 3.25
1360 4754 0.913934 TCCTGCCTGCCTGTCCATTA 60.914 55.000 0.00 0.00 0.00 1.90
1361 4755 0.184451 CCTGCCTGCCTGTCCATTAT 59.816 55.000 0.00 0.00 0.00 1.28
1363 4757 1.952296 CTGCCTGCCTGTCCATTATTC 59.048 52.381 0.00 0.00 0.00 1.75
1365 4759 1.133668 GCCTGCCTGTCCATTATTCCT 60.134 52.381 0.00 0.00 0.00 3.36
1366 4760 2.579873 CCTGCCTGTCCATTATTCCTG 58.420 52.381 0.00 0.00 0.00 3.86
1367 4761 2.173356 CCTGCCTGTCCATTATTCCTGA 59.827 50.000 0.00 0.00 0.00 3.86
1368 4762 3.371917 CCTGCCTGTCCATTATTCCTGAA 60.372 47.826 0.00 0.00 0.00 3.02
1369 4763 4.467769 CTGCCTGTCCATTATTCCTGAAT 58.532 43.478 0.00 0.00 34.93 2.57
1506 4943 1.069636 CAAGGCTCGTGAGTTGAAAGC 60.070 52.381 0.00 0.00 0.00 3.51
1610 5054 3.890756 TGCTTGTCCATGTTCACTTGATT 59.109 39.130 0.00 0.00 0.00 2.57
1643 5087 1.068125 GGCAATGTGTAAAACCGGTCC 60.068 52.381 8.04 0.00 0.00 4.46
1644 5088 1.883926 GCAATGTGTAAAACCGGTCCT 59.116 47.619 8.04 0.00 0.00 3.85
1677 5121 9.409312 TCATTGCAACTAACTTTGATACAATTG 57.591 29.630 0.00 3.24 0.00 2.32
1855 5323 6.404623 CCTTGAAACATGGCGAATTCATTCTA 60.405 38.462 6.22 0.00 34.69 2.10
1865 5333 4.784710 GCGAATTCATTCTACTCTTGCTGC 60.785 45.833 6.22 0.00 34.69 5.25
1909 5379 4.958509 TCATGCACATGTTCCATGTTTTT 58.041 34.783 24.62 0.00 39.72 1.94
1954 5424 5.684704 CAGTCATGACATAAACAGGGGTAT 58.315 41.667 27.02 0.00 0.00 2.73
2011 5481 9.646427 GGCAATATACTTCCTTGTAGATTCTAG 57.354 37.037 0.00 0.00 33.66 2.43
2141 5651 4.201871 TGTCCTTGTCTTGTTTACTTTGCG 60.202 41.667 0.00 0.00 0.00 4.85
2255 5804 3.259902 CCTCTCGGATCATGCATGTATG 58.740 50.000 25.43 16.85 0.00 2.39
2369 5924 5.118050 TCGCTTAGTACAGTCATTTTTGTCG 59.882 40.000 0.00 0.00 0.00 4.35
2403 5960 6.551601 ACTGCTTATATGTGCTCCTTACTAGT 59.448 38.462 0.00 0.00 0.00 2.57
2544 6119 9.407380 CATAGCCCTATTGGTTAATTATATGCA 57.593 33.333 0.00 0.00 33.04 3.96
2624 6208 0.743688 TTGTGTCAGTGCGCCATTTT 59.256 45.000 4.18 0.00 0.00 1.82
2652 6236 2.627699 TGTTGCTTCCAAAGTGATTCCC 59.372 45.455 0.00 0.00 31.68 3.97
2684 6268 6.186420 TGCTTTGGATATTCCTATGCTGTA 57.814 37.500 13.80 0.00 40.90 2.74
2723 6307 4.106179 TGGCCATTATCTATGACCCATTGT 59.894 41.667 0.00 0.00 36.02 2.71
2760 6344 4.110482 GAACGATGCACGGTAGAAATACT 58.890 43.478 12.18 0.00 44.13 2.12
2794 6382 5.059710 GTGTTTGCATTCTTTCGTTCTATGC 59.940 40.000 0.00 0.00 41.39 3.14
2840 6428 5.010922 TCTGCTTTTGTGCATGGTAAATTCT 59.989 36.000 0.00 0.00 42.48 2.40
2841 6429 5.609423 TGCTTTTGTGCATGGTAAATTCTT 58.391 33.333 0.00 0.00 38.12 2.52
2842 6430 6.054295 TGCTTTTGTGCATGGTAAATTCTTT 58.946 32.000 0.00 0.00 38.12 2.52
2843 6431 6.541641 TGCTTTTGTGCATGGTAAATTCTTTT 59.458 30.769 0.00 0.00 38.12 2.27
2844 6432 7.066766 TGCTTTTGTGCATGGTAAATTCTTTTT 59.933 29.630 0.00 0.00 38.12 1.94
2882 6470 1.006758 AGAACCACTATCCCGGTCTGA 59.993 52.381 0.00 0.00 33.17 3.27
2962 6557 3.058016 ACCAGTTCTGATTGTTGAATGCG 60.058 43.478 1.00 0.00 0.00 4.73
3035 6630 8.015087 CGCAACACATCTTACTAAAAATTCTGA 58.985 33.333 0.00 0.00 0.00 3.27
3194 6807 8.694540 TGGTTTAGATGTCCCAAAATAATCATG 58.305 33.333 0.00 0.00 0.00 3.07
3201 6814 9.246670 GATGTCCCAAAATAATCATGGATATGA 57.753 33.333 0.00 0.00 46.67 2.15
3290 6904 8.043710 CCATAAATAATAACCACCCTGCAAAAA 58.956 33.333 0.00 0.00 0.00 1.94
3326 6940 9.996554 ATTAATAACCAAGGTTCCTTTGAAAAG 57.003 29.630 7.93 0.00 39.31 2.27
3372 6986 8.868522 TGAATCATAGAAGAAGTTGGTTCAAT 57.131 30.769 0.00 0.00 36.54 2.57
3388 7002 6.354130 TGGTTCAATTAGCCTGTAATACCTC 58.646 40.000 0.00 0.00 0.00 3.85
3578 7195 1.789078 CTTTGCACTTGGTCAGCGCT 61.789 55.000 2.64 2.64 31.16 5.92
3638 7255 2.033141 TGCTCCTGTTGCTCCAGC 59.967 61.111 0.00 0.00 42.50 4.85
3644 7261 1.962822 CTGTTGCTCCAGCTTCGCA 60.963 57.895 0.00 0.00 42.66 5.10
3647 7264 1.669115 TTGCTCCAGCTTCGCAGAC 60.669 57.895 0.00 0.00 42.66 3.51
3652 7269 1.135915 CTCCAGCTTCGCAGACTATGT 59.864 52.381 0.00 0.00 34.32 2.29
3683 7300 3.407698 TGACAACATGTGCGGAAGTATT 58.592 40.909 0.00 0.00 0.00 1.89
3696 7313 5.163353 TGCGGAAGTATTTGGTATCTCATCA 60.163 40.000 0.00 0.00 0.00 3.07
3718 7335 8.906867 CATCAGTGACAAATCCAGGTAAATAAT 58.093 33.333 0.00 0.00 0.00 1.28
3887 7511 0.179009 AGGTGCTCTTGCTGCTTCAA 60.179 50.000 0.00 0.00 40.48 2.69
3970 7594 8.367156 ACAAATGCAGGTAAATTAGTTGAACAT 58.633 29.630 0.00 0.00 0.00 2.71
4164 7788 2.080654 ACCTGCCTTTTTGCCACTTA 57.919 45.000 0.00 0.00 0.00 2.24
4213 7838 8.378565 TGGATATTGTGGAAGATATCTCTTTCC 58.621 37.037 13.13 13.13 41.87 3.13
4325 7956 2.787473 TGTGGAGGCTAACCATTCAG 57.213 50.000 0.00 0.00 39.69 3.02
4450 8090 0.250901 ACATGCCTCTGTTGTCACCC 60.251 55.000 0.00 0.00 0.00 4.61
4454 8094 1.064017 TGCCTCTGTTGTCACCCTTTT 60.064 47.619 0.00 0.00 0.00 2.27
4534 8181 8.772250 AGTTCCTTAAAGATATCATCTGTTGGA 58.228 33.333 5.32 1.23 40.13 3.53
4600 8248 0.739813 GAATCGGTGGACGGAACAGG 60.740 60.000 0.00 0.00 44.45 4.00
4601 8249 2.798148 AATCGGTGGACGGAACAGGC 62.798 60.000 0.00 0.00 44.45 4.85
4625 8273 5.966742 ACTTTTGAGCAGAATCCTAAACC 57.033 39.130 0.00 0.00 0.00 3.27
4664 8312 2.583441 GGGGCTTTTGGGAGCAACC 61.583 63.158 0.00 0.00 44.49 3.77
4702 8350 4.034742 GTGAAGAAACTGAGCGTGGTTAAA 59.965 41.667 0.00 0.00 0.00 1.52
4759 8407 5.245977 ACAAATGTAGGGGGTGAAATTCAAG 59.754 40.000 0.00 0.00 0.00 3.02
4764 8412 3.230976 AGGGGGTGAAATTCAAGTTGAC 58.769 45.455 4.68 0.00 0.00 3.18
4843 8491 0.235665 ATCAAACACGAGCGCAAGTG 59.764 50.000 26.37 26.37 43.46 3.16
4879 8562 3.877559 AGATGCTCGTGAATGAAATGGA 58.122 40.909 0.00 0.00 0.00 3.41
4887 8570 5.518812 TCGTGAATGAAATGGACAAACTTG 58.481 37.500 0.00 0.00 0.00 3.16
4888 8571 5.067153 TCGTGAATGAAATGGACAAACTTGT 59.933 36.000 0.00 0.00 45.65 3.16
4890 8573 6.074888 CGTGAATGAAATGGACAAACTTGTTC 60.075 38.462 0.00 0.00 42.43 3.18
4938 8621 9.871238 ACTAAGTAAGTTGGACACTATACAATG 57.129 33.333 0.00 0.00 33.35 2.82
4981 8664 4.101898 GGTAAAGAGGAAGGAAGGAGGATC 59.898 50.000 0.00 0.00 0.00 3.36
4982 8665 3.793842 AAGAGGAAGGAAGGAGGATCT 57.206 47.619 0.00 0.00 33.73 2.75
4983 8666 3.044873 AGAGGAAGGAAGGAGGATCTG 57.955 52.381 0.00 0.00 33.73 2.90
4984 8667 2.317594 AGAGGAAGGAAGGAGGATCTGT 59.682 50.000 0.00 0.00 33.73 3.41
4985 8668 2.433970 GAGGAAGGAAGGAGGATCTGTG 59.566 54.545 0.00 0.00 33.73 3.66
4986 8669 2.192263 GGAAGGAAGGAGGATCTGTGT 58.808 52.381 0.00 0.00 33.73 3.72
4987 8670 2.573915 GGAAGGAAGGAGGATCTGTGTT 59.426 50.000 0.00 0.00 33.73 3.32
4988 8671 3.369997 GGAAGGAAGGAGGATCTGTGTTC 60.370 52.174 0.00 0.00 33.73 3.18
4996 8687 5.026121 AGGAGGATCTGTGTTCTTATGTGA 58.974 41.667 0.00 0.00 33.73 3.58
5114 8867 4.249661 GTTGGTTGAAGATGGAGAGAGAC 58.750 47.826 0.00 0.00 0.00 3.36
5115 8868 2.493675 TGGTTGAAGATGGAGAGAGACG 59.506 50.000 0.00 0.00 0.00 4.18
5117 8870 2.136298 TGAAGATGGAGAGAGACGCT 57.864 50.000 0.00 0.00 0.00 5.07
5118 8871 1.747924 TGAAGATGGAGAGAGACGCTG 59.252 52.381 0.00 0.00 0.00 5.18
5119 8872 1.066908 GAAGATGGAGAGAGACGCTGG 59.933 57.143 0.00 0.00 0.00 4.85
5120 8873 0.257328 AGATGGAGAGAGACGCTGGA 59.743 55.000 0.00 0.00 0.00 3.86
5146 8901 6.660949 AGGAGTTGCTCTAATTTGTTGCTTAT 59.339 34.615 8.34 0.00 0.00 1.73
5147 8902 7.829211 AGGAGTTGCTCTAATTTGTTGCTTATA 59.171 33.333 8.34 0.00 0.00 0.98
5214 8969 9.233232 CAAATGTATGCATGCATGTGATATATC 57.767 33.333 37.43 17.85 39.56 1.63
5220 8975 7.083875 TGCATGCATGTGATATATCATGAAG 57.916 36.000 26.79 10.03 42.52 3.02
5378 9138 9.770097 ATTACATATGACGATGAAGAAATCAGT 57.230 29.630 10.38 0.00 42.53 3.41
5421 9181 1.349357 GCCTCTTCCTATAAGCCCAGG 59.651 57.143 0.00 0.00 0.00 4.45
5430 9190 1.068121 ATAAGCCCAGGCCCACTATC 58.932 55.000 4.70 0.00 43.17 2.08
5469 9229 0.523519 GAAAAGTGCCTGCAGCTACC 59.476 55.000 8.66 0.00 44.23 3.18
5496 9256 4.870636 TCCATGGCTCTTGGTATTTGAAT 58.129 39.130 6.96 0.00 35.64 2.57
5572 9332 7.246027 TGAGTACATACACATATCCCTATGGT 58.754 38.462 0.00 0.00 39.29 3.55
5573 9333 7.396339 TGAGTACATACACATATCCCTATGGTC 59.604 40.741 0.00 0.00 39.29 4.02
5574 9334 6.668283 AGTACATACACATATCCCTATGGTCC 59.332 42.308 0.00 0.00 39.29 4.46
5586 9346 4.134563 CCCTATGGTCCGGTAAAAATCTG 58.865 47.826 0.00 0.00 0.00 2.90
5591 9351 4.471548 TGGTCCGGTAAAAATCTGGAAAA 58.528 39.130 0.00 0.00 41.31 2.29
5592 9352 4.894114 TGGTCCGGTAAAAATCTGGAAAAA 59.106 37.500 0.00 0.00 41.31 1.94
5593 9353 5.010213 TGGTCCGGTAAAAATCTGGAAAAAG 59.990 40.000 0.00 0.00 41.31 2.27
5596 9356 7.204604 GTCCGGTAAAAATCTGGAAAAAGAAA 58.795 34.615 0.00 0.00 41.31 2.52
5599 9366 9.135843 CCGGTAAAAATCTGGAAAAAGAAATAC 57.864 33.333 0.00 0.00 33.49 1.89
5716 9485 5.365314 AGCCCAAAACAAAACCAGATTTCTA 59.635 36.000 0.00 0.00 0.00 2.10
5719 9488 5.689961 CCAAAACAAAACCAGATTTCTACCG 59.310 40.000 0.00 0.00 0.00 4.02
5731 9500 2.623878 TTCTACCGAAACTTGCCACA 57.376 45.000 0.00 0.00 0.00 4.17
5739 9508 0.881118 AAACTTGCCACAGGTATGCG 59.119 50.000 0.00 0.00 0.00 4.73
5740 9509 0.960364 AACTTGCCACAGGTATGCGG 60.960 55.000 0.00 0.00 0.00 5.69
5741 9510 2.045438 TTGCCACAGGTATGCGGG 60.045 61.111 0.00 0.00 0.00 6.13
5742 9511 2.535485 CTTGCCACAGGTATGCGGGA 62.535 60.000 0.00 0.00 0.00 5.14
5743 9512 1.920734 TTGCCACAGGTATGCGGGAT 61.921 55.000 0.00 0.00 28.16 3.85
5744 9513 1.893808 GCCACAGGTATGCGGGATG 60.894 63.158 0.00 0.00 0.00 3.51
5745 9514 1.526887 CCACAGGTATGCGGGATGT 59.473 57.895 0.00 0.00 0.00 3.06
5746 9515 0.815213 CCACAGGTATGCGGGATGTG 60.815 60.000 0.00 0.00 40.68 3.21
5747 9516 0.107703 CACAGGTATGCGGGATGTGT 60.108 55.000 0.00 0.00 37.17 3.72
5748 9517 1.138069 CACAGGTATGCGGGATGTGTA 59.862 52.381 0.00 0.00 37.17 2.90
5749 9518 2.047061 ACAGGTATGCGGGATGTGTAT 58.953 47.619 0.00 0.00 0.00 2.29
5750 9519 3.006430 CACAGGTATGCGGGATGTGTATA 59.994 47.826 0.00 0.00 37.17 1.47
5751 9520 3.838317 ACAGGTATGCGGGATGTGTATAT 59.162 43.478 0.00 0.00 0.00 0.86
5752 9521 4.183865 CAGGTATGCGGGATGTGTATATG 58.816 47.826 0.00 0.00 0.00 1.78
5753 9522 3.838317 AGGTATGCGGGATGTGTATATGT 59.162 43.478 0.00 0.00 0.00 2.29
5754 9523 3.932710 GGTATGCGGGATGTGTATATGTG 59.067 47.826 0.00 0.00 0.00 3.21
5755 9524 3.769739 ATGCGGGATGTGTATATGTGT 57.230 42.857 0.00 0.00 0.00 3.72
5756 9525 3.106242 TGCGGGATGTGTATATGTGTC 57.894 47.619 0.00 0.00 0.00 3.67
5757 9526 2.224185 TGCGGGATGTGTATATGTGTCC 60.224 50.000 0.00 0.00 0.00 4.02
5758 9527 2.870435 GCGGGATGTGTATATGTGTCCC 60.870 54.545 0.00 0.00 41.49 4.46
5759 9528 2.289444 CGGGATGTGTATATGTGTCCCC 60.289 54.545 2.85 0.00 41.80 4.81
5760 9529 2.289444 GGGATGTGTATATGTGTCCCCG 60.289 54.545 0.00 0.00 39.49 5.73
5763 9532 0.395312 GTGTATATGTGTCCCCGGGG 59.605 60.000 35.80 35.80 0.00 5.73
5779 9548 3.244387 CCCGGGGAAAATTTCACATTGTT 60.244 43.478 14.71 0.00 33.74 2.83
5813 9583 9.823098 TTGAAAAACATGACTTTCAAAATGTTG 57.177 25.926 24.45 0.00 44.45 3.33
5829 9599 7.615365 TCAAAATGTTGAAATATAGAGGGCACT 59.385 33.333 0.00 0.00 40.87 4.40
5903 9673 6.610741 ATTGTTGTTGTTGTTGTTGTTGTT 57.389 29.167 0.00 0.00 0.00 2.83
5904 9674 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
5905 9675 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
5906 9676 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
5907 9677 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
5908 9678 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
5949 9719 2.060326 TAAGCTGTAGTCGCACACAC 57.940 50.000 0.00 0.00 0.00 3.82
5950 9720 0.104120 AAGCTGTAGTCGCACACACA 59.896 50.000 0.00 0.00 0.00 3.72
5951 9721 0.597637 AGCTGTAGTCGCACACACAC 60.598 55.000 0.00 0.00 0.00 3.82
5952 9722 0.874175 GCTGTAGTCGCACACACACA 60.874 55.000 0.00 0.00 0.00 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.083997 CCTTCTCCCAGGTCCCGG 61.084 72.222 0.00 0.00 0.00 5.73
1 2 3.787001 GCCTTCTCCCAGGTCCCG 61.787 72.222 0.00 0.00 36.15 5.14
2 3 3.787001 CGCCTTCTCCCAGGTCCC 61.787 72.222 0.00 0.00 36.15 4.46
3 4 3.787001 CCGCCTTCTCCCAGGTCC 61.787 72.222 0.00 0.00 36.15 4.46
4 5 3.787001 CCCGCCTTCTCCCAGGTC 61.787 72.222 0.00 0.00 36.15 3.85
7 8 3.474570 CTCCCCGCCTTCTCCCAG 61.475 72.222 0.00 0.00 0.00 4.45
10 11 4.168291 CAGCTCCCCGCCTTCTCC 62.168 72.222 0.00 0.00 40.39 3.71
11 12 4.168291 CCAGCTCCCCGCCTTCTC 62.168 72.222 0.00 0.00 40.39 2.87
13 14 4.785453 CACCAGCTCCCCGCCTTC 62.785 72.222 0.00 0.00 40.39 3.46
33 34 4.899239 CTCCCGACATGGCTCGCC 62.899 72.222 0.00 0.00 35.87 5.54
34 35 3.838271 TCTCCCGACATGGCTCGC 61.838 66.667 0.00 0.00 35.87 5.03
35 36 2.105128 GTCTCCCGACATGGCTCG 59.895 66.667 0.00 0.00 39.98 5.03
36 37 2.501610 GGTCTCCCGACATGGCTC 59.498 66.667 0.00 0.00 42.05 4.70
46 47 4.716977 ACTCACCCCCGGTCTCCC 62.717 72.222 0.00 0.00 31.02 4.30
47 48 3.075641 GACTCACCCCCGGTCTCC 61.076 72.222 0.00 0.00 31.02 3.71
48 49 2.220786 TAGGACTCACCCCCGGTCTC 62.221 65.000 0.00 0.00 40.05 3.36
49 50 1.591280 ATAGGACTCACCCCCGGTCT 61.591 60.000 0.00 0.00 40.05 3.85
50 51 1.075450 ATAGGACTCACCCCCGGTC 60.075 63.158 0.00 0.00 40.05 4.79
51 52 1.382695 CATAGGACTCACCCCCGGT 60.383 63.158 0.00 0.00 40.05 5.28
52 53 2.140792 CCATAGGACTCACCCCCGG 61.141 68.421 0.00 0.00 40.05 5.73
53 54 2.140792 CCCATAGGACTCACCCCCG 61.141 68.421 0.00 0.00 40.05 5.73
54 55 1.004361 ACCCATAGGACTCACCCCC 59.996 63.158 0.00 0.00 40.05 5.40
55 56 0.620700 ACACCCATAGGACTCACCCC 60.621 60.000 0.00 0.00 40.05 4.95
56 57 0.541863 CACACCCATAGGACTCACCC 59.458 60.000 0.00 0.00 40.05 4.61
57 58 1.207329 GTCACACCCATAGGACTCACC 59.793 57.143 0.00 0.00 36.73 4.02
58 59 1.207329 GGTCACACCCATAGGACTCAC 59.793 57.143 0.00 0.00 36.73 3.51
59 60 1.568504 GGTCACACCCATAGGACTCA 58.431 55.000 0.00 0.00 36.73 3.41
60 61 0.460311 CGGTCACACCCATAGGACTC 59.540 60.000 0.00 0.00 33.75 3.36
61 62 0.252103 ACGGTCACACCCATAGGACT 60.252 55.000 0.00 0.00 33.75 3.85
62 63 0.108329 CACGGTCACACCCATAGGAC 60.108 60.000 0.00 0.00 33.75 3.85
63 64 0.543410 ACACGGTCACACCCATAGGA 60.543 55.000 0.00 0.00 33.75 2.94
64 65 0.391130 CACACGGTCACACCCATAGG 60.391 60.000 0.00 0.00 33.75 2.57
65 66 0.320374 ACACACGGTCACACCCATAG 59.680 55.000 0.00 0.00 33.75 2.23
66 67 1.630223 TACACACGGTCACACCCATA 58.370 50.000 0.00 0.00 33.75 2.74
67 68 0.759959 TTACACACGGTCACACCCAT 59.240 50.000 0.00 0.00 33.75 4.00
68 69 0.105224 CTTACACACGGTCACACCCA 59.895 55.000 0.00 0.00 33.75 4.51
69 70 0.601841 CCTTACACACGGTCACACCC 60.602 60.000 0.00 0.00 33.75 4.61
70 71 0.105408 ACCTTACACACGGTCACACC 59.895 55.000 0.00 0.00 34.05 4.16
71 72 1.214367 CACCTTACACACGGTCACAC 58.786 55.000 0.00 0.00 0.00 3.82
72 73 0.825410 ACACCTTACACACGGTCACA 59.175 50.000 0.00 0.00 0.00 3.58
73 74 2.669364 CTACACCTTACACACGGTCAC 58.331 52.381 0.00 0.00 0.00 3.67
74 75 1.000060 GCTACACCTTACACACGGTCA 60.000 52.381 0.00 0.00 0.00 4.02
75 76 1.000060 TGCTACACCTTACACACGGTC 60.000 52.381 0.00 0.00 0.00 4.79
76 77 1.000506 CTGCTACACCTTACACACGGT 59.999 52.381 0.00 0.00 0.00 4.83
77 78 1.000506 ACTGCTACACCTTACACACGG 59.999 52.381 0.00 0.00 0.00 4.94
78 79 2.433868 ACTGCTACACCTTACACACG 57.566 50.000 0.00 0.00 0.00 4.49
79 80 4.235360 CACTACTGCTACACCTTACACAC 58.765 47.826 0.00 0.00 0.00 3.82
80 81 3.257375 CCACTACTGCTACACCTTACACA 59.743 47.826 0.00 0.00 0.00 3.72
81 82 3.368116 CCCACTACTGCTACACCTTACAC 60.368 52.174 0.00 0.00 0.00 2.90
82 83 2.829720 CCCACTACTGCTACACCTTACA 59.170 50.000 0.00 0.00 0.00 2.41
83 84 2.830321 ACCCACTACTGCTACACCTTAC 59.170 50.000 0.00 0.00 0.00 2.34
84 85 3.179902 ACCCACTACTGCTACACCTTA 57.820 47.619 0.00 0.00 0.00 2.69
85 86 2.025636 ACCCACTACTGCTACACCTT 57.974 50.000 0.00 0.00 0.00 3.50
86 87 2.913603 TACCCACTACTGCTACACCT 57.086 50.000 0.00 0.00 0.00 4.00
87 88 2.418334 GCTTACCCACTACTGCTACACC 60.418 54.545 0.00 0.00 0.00 4.16
88 89 2.496470 AGCTTACCCACTACTGCTACAC 59.504 50.000 0.00 0.00 0.00 2.90
89 90 2.758979 GAGCTTACCCACTACTGCTACA 59.241 50.000 0.00 0.00 0.00 2.74
90 91 2.758979 TGAGCTTACCCACTACTGCTAC 59.241 50.000 0.00 0.00 0.00 3.58
91 92 2.758979 GTGAGCTTACCCACTACTGCTA 59.241 50.000 0.00 0.00 0.00 3.49
92 93 1.550976 GTGAGCTTACCCACTACTGCT 59.449 52.381 0.00 0.00 0.00 4.24
93 94 1.405661 GGTGAGCTTACCCACTACTGC 60.406 57.143 16.76 0.00 34.56 4.40
94 95 1.899814 TGGTGAGCTTACCCACTACTG 59.100 52.381 23.81 0.00 40.09 2.74
95 96 2.320681 TGGTGAGCTTACCCACTACT 57.679 50.000 23.81 0.00 40.09 2.57
96 97 2.302157 ACTTGGTGAGCTTACCCACTAC 59.698 50.000 23.81 0.00 40.09 2.73
97 98 2.616524 ACTTGGTGAGCTTACCCACTA 58.383 47.619 23.81 5.23 40.09 2.74
98 99 1.435256 ACTTGGTGAGCTTACCCACT 58.565 50.000 23.81 3.90 40.09 4.00
99 100 2.302157 ACTACTTGGTGAGCTTACCCAC 59.698 50.000 23.81 9.86 40.09 4.61
100 101 2.616524 ACTACTTGGTGAGCTTACCCA 58.383 47.619 23.81 13.01 40.09 4.51
101 102 3.697619 AACTACTTGGTGAGCTTACCC 57.302 47.619 23.81 7.70 40.09 3.69
102 103 7.494952 CCTTATAAACTACTTGGTGAGCTTACC 59.505 40.741 20.46 20.46 41.24 2.85
103 104 8.039538 ACCTTATAAACTACTTGGTGAGCTTAC 58.960 37.037 0.00 0.00 0.00 2.34
104 105 8.038944 CACCTTATAAACTACTTGGTGAGCTTA 58.961 37.037 10.74 0.00 44.21 3.09
105 106 6.879458 CACCTTATAAACTACTTGGTGAGCTT 59.121 38.462 10.74 0.00 44.21 3.74
106 107 6.212791 TCACCTTATAAACTACTTGGTGAGCT 59.787 38.462 13.61 0.00 44.82 4.09
107 108 6.403878 TCACCTTATAAACTACTTGGTGAGC 58.596 40.000 13.61 0.00 44.82 4.26
109 110 7.549147 ACTCACCTTATAAACTACTTGGTGA 57.451 36.000 15.71 15.71 46.65 4.02
110 111 8.308931 TGTACTCACCTTATAAACTACTTGGTG 58.691 37.037 10.19 10.19 43.22 4.17
111 112 8.426569 TGTACTCACCTTATAAACTACTTGGT 57.573 34.615 0.00 0.00 0.00 3.67
112 113 9.148104 GTTGTACTCACCTTATAAACTACTTGG 57.852 37.037 0.00 0.00 0.00 3.61
113 114 9.924650 AGTTGTACTCACCTTATAAACTACTTG 57.075 33.333 0.00 0.00 0.00 3.16
128 129 9.736488 TGCATACGAGCATAGAGTTGTACTCAC 62.736 44.444 9.30 0.00 42.75 3.51
129 130 7.846700 TGCATACGAGCATAGAGTTGTACTCA 61.847 42.308 9.30 0.00 42.75 3.41
130 131 4.912766 GCATACGAGCATAGAGTTGTACTC 59.087 45.833 0.00 0.00 45.38 2.59
131 132 4.338400 TGCATACGAGCATAGAGTTGTACT 59.662 41.667 0.00 0.00 40.11 2.73
132 133 4.607955 TGCATACGAGCATAGAGTTGTAC 58.392 43.478 0.00 0.00 40.11 2.90
133 134 4.911514 TGCATACGAGCATAGAGTTGTA 57.088 40.909 0.00 0.00 40.11 2.41
134 135 3.801114 TGCATACGAGCATAGAGTTGT 57.199 42.857 0.00 0.00 40.11 3.32
135 136 3.246226 GGTTGCATACGAGCATAGAGTTG 59.754 47.826 0.00 0.00 45.19 3.16
136 137 3.118775 TGGTTGCATACGAGCATAGAGTT 60.119 43.478 0.00 0.00 45.19 3.01
137 138 2.430694 TGGTTGCATACGAGCATAGAGT 59.569 45.455 0.00 0.00 45.19 3.24
138 139 3.097877 TGGTTGCATACGAGCATAGAG 57.902 47.619 0.00 0.00 45.19 2.43
139 140 3.535280 TTGGTTGCATACGAGCATAGA 57.465 42.857 0.00 0.00 45.19 1.98
140 141 3.373748 TGTTTGGTTGCATACGAGCATAG 59.626 43.478 0.00 0.00 45.19 2.23
141 142 3.339141 TGTTTGGTTGCATACGAGCATA 58.661 40.909 0.00 0.00 45.19 3.14
142 143 2.158559 TGTTTGGTTGCATACGAGCAT 58.841 42.857 0.00 0.00 45.19 3.79
143 144 1.598882 TGTTTGGTTGCATACGAGCA 58.401 45.000 0.00 0.00 43.99 4.26
144 145 2.315901 GTTGTTTGGTTGCATACGAGC 58.684 47.619 0.00 0.00 0.00 5.03
145 146 2.032377 ACGTTGTTTGGTTGCATACGAG 60.032 45.455 0.00 0.00 0.00 4.18
146 147 1.941294 ACGTTGTTTGGTTGCATACGA 59.059 42.857 0.00 0.00 0.00 3.43
147 148 2.040524 CACGTTGTTTGGTTGCATACG 58.959 47.619 0.00 0.00 0.00 3.06
148 149 1.784283 GCACGTTGTTTGGTTGCATAC 59.216 47.619 0.00 0.00 0.00 2.39
149 150 1.405463 TGCACGTTGTTTGGTTGCATA 59.595 42.857 0.00 0.00 0.00 3.14
150 151 0.174389 TGCACGTTGTTTGGTTGCAT 59.826 45.000 0.00 0.00 0.00 3.96
151 152 0.734253 GTGCACGTTGTTTGGTTGCA 60.734 50.000 0.00 0.00 0.00 4.08
152 153 0.457681 AGTGCACGTTGTTTGGTTGC 60.458 50.000 12.01 0.00 0.00 4.17
153 154 1.544686 GAGTGCACGTTGTTTGGTTG 58.455 50.000 12.01 0.00 0.00 3.77
154 155 0.098025 CGAGTGCACGTTGTTTGGTT 59.902 50.000 12.01 0.00 0.00 3.67
155 156 1.022451 ACGAGTGCACGTTGTTTGGT 61.022 50.000 12.01 0.00 44.14 3.67
156 157 0.588730 CACGAGTGCACGTTGTTTGG 60.589 55.000 12.01 0.00 44.76 3.28
157 158 0.096281 ACACGAGTGCACGTTGTTTG 59.904 50.000 12.01 6.77 44.76 2.93
158 159 0.096281 CACACGAGTGCACGTTGTTT 59.904 50.000 12.01 1.57 44.76 2.83
159 160 0.738063 TCACACGAGTGCACGTTGTT 60.738 50.000 12.01 0.00 45.49 2.83
160 161 1.153726 TCACACGAGTGCACGTTGT 60.154 52.632 12.01 12.80 45.49 3.32
161 162 1.272715 GTCACACGAGTGCACGTTG 59.727 57.895 12.01 12.14 45.49 4.10
162 163 0.738063 TTGTCACACGAGTGCACGTT 60.738 50.000 12.01 0.00 45.49 3.99
163 164 1.145759 CTTGTCACACGAGTGCACGT 61.146 55.000 12.01 3.44 45.49 4.49
164 165 0.869880 TCTTGTCACACGAGTGCACG 60.870 55.000 12.01 2.67 45.49 5.34
165 166 1.502231 ATCTTGTCACACGAGTGCAC 58.498 50.000 9.40 9.40 45.49 4.57
166 167 2.035321 TGTATCTTGTCACACGAGTGCA 59.965 45.455 8.23 7.02 45.49 4.57
167 168 2.672714 TGTATCTTGTCACACGAGTGC 58.327 47.619 8.23 4.48 45.49 4.40
168 169 7.496342 TGACATTGTATCTTGTCACACGAGTG 61.496 42.308 6.65 6.65 45.35 3.51
169 170 4.883083 ACATTGTATCTTGTCACACGAGT 58.117 39.130 0.00 0.00 31.48 4.18
170 171 4.923281 TGACATTGTATCTTGTCACACGAG 59.077 41.667 1.84 0.00 45.35 4.18
171 172 4.877282 TGACATTGTATCTTGTCACACGA 58.123 39.130 1.84 0.00 45.35 4.35
172 173 4.434725 GCTGACATTGTATCTTGTCACACG 60.435 45.833 1.84 0.00 45.35 4.49
173 174 4.452114 TGCTGACATTGTATCTTGTCACAC 59.548 41.667 1.84 0.00 45.35 3.82
174 175 4.640364 TGCTGACATTGTATCTTGTCACA 58.360 39.130 1.84 3.77 45.35 3.58
175 176 5.611796 TTGCTGACATTGTATCTTGTCAC 57.388 39.130 1.84 1.57 45.35 3.67
177 178 4.154737 TGCTTGCTGACATTGTATCTTGTC 59.845 41.667 0.00 0.00 42.05 3.18
178 179 4.074259 TGCTTGCTGACATTGTATCTTGT 58.926 39.130 0.00 0.00 0.00 3.16
179 180 4.690184 TGCTTGCTGACATTGTATCTTG 57.310 40.909 0.00 0.00 0.00 3.02
180 181 5.009911 TGTTTGCTTGCTGACATTGTATCTT 59.990 36.000 0.00 0.00 0.00 2.40
181 182 4.520111 TGTTTGCTTGCTGACATTGTATCT 59.480 37.500 0.00 0.00 0.00 1.98
182 183 4.618489 GTGTTTGCTTGCTGACATTGTATC 59.382 41.667 0.00 0.00 0.00 2.24
183 184 4.037803 TGTGTTTGCTTGCTGACATTGTAT 59.962 37.500 0.00 0.00 0.00 2.29
184 185 3.379688 TGTGTTTGCTTGCTGACATTGTA 59.620 39.130 0.00 0.00 0.00 2.41
185 186 2.166050 TGTGTTTGCTTGCTGACATTGT 59.834 40.909 0.00 0.00 0.00 2.71
186 187 2.792674 CTGTGTTTGCTTGCTGACATTG 59.207 45.455 5.32 0.00 0.00 2.82
187 188 2.428171 ACTGTGTTTGCTTGCTGACATT 59.572 40.909 5.32 0.00 0.00 2.71
188 189 2.026641 ACTGTGTTTGCTTGCTGACAT 58.973 42.857 5.32 0.00 0.00 3.06
189 190 1.132834 CACTGTGTTTGCTTGCTGACA 59.867 47.619 0.00 0.00 0.00 3.58
190 191 1.831343 CACTGTGTTTGCTTGCTGAC 58.169 50.000 0.00 0.00 0.00 3.51
191 192 0.101040 GCACTGTGTTTGCTTGCTGA 59.899 50.000 9.86 0.00 37.00 4.26
192 193 1.204228 CGCACTGTGTTTGCTTGCTG 61.204 55.000 9.86 0.00 37.87 4.41
193 194 1.064621 CGCACTGTGTTTGCTTGCT 59.935 52.632 9.86 0.00 37.87 3.91
194 195 0.028770 TACGCACTGTGTTTGCTTGC 59.971 50.000 9.86 0.00 37.87 4.01
195 196 1.597195 TCTACGCACTGTGTTTGCTTG 59.403 47.619 9.86 0.00 37.87 4.01
196 197 1.948104 TCTACGCACTGTGTTTGCTT 58.052 45.000 9.86 0.00 37.87 3.91
197 198 1.800586 CATCTACGCACTGTGTTTGCT 59.199 47.619 9.86 0.00 37.87 3.91
198 199 1.725931 GCATCTACGCACTGTGTTTGC 60.726 52.381 9.86 5.13 36.57 3.68
199 200 1.462378 CGCATCTACGCACTGTGTTTG 60.462 52.381 9.86 2.71 0.00 2.93
200 201 0.790207 CGCATCTACGCACTGTGTTT 59.210 50.000 9.86 0.00 0.00 2.83
201 202 0.319555 ACGCATCTACGCACTGTGTT 60.320 50.000 9.86 0.00 36.19 3.32
202 203 0.732880 GACGCATCTACGCACTGTGT 60.733 55.000 9.86 0.01 36.40 3.72
203 204 1.733416 CGACGCATCTACGCACTGTG 61.733 60.000 2.76 2.76 36.19 3.66
204 205 1.514228 CGACGCATCTACGCACTGT 60.514 57.895 0.00 0.00 36.19 3.55
205 206 3.289629 CGACGCATCTACGCACTG 58.710 61.111 0.00 0.00 36.19 3.66
210 211 3.672397 CGCAGCGACGCATCTACG 61.672 66.667 23.70 13.44 39.50 3.51
211 212 1.658717 ATCGCAGCGACGCATCTAC 60.659 57.895 22.28 5.10 39.18 2.59
212 213 1.658409 CATCGCAGCGACGCATCTA 60.658 57.895 22.28 4.96 39.18 1.98
213 214 2.958543 CATCGCAGCGACGCATCT 60.959 61.111 22.28 0.00 39.18 2.90
214 215 4.640113 GCATCGCAGCGACGCATC 62.640 66.667 29.58 11.79 44.50 3.91
224 225 1.986882 TATCCTCTCTCTGCATCGCA 58.013 50.000 0.00 0.00 36.92 5.10
225 226 2.878580 CATATCCTCTCTCTGCATCGC 58.121 52.381 0.00 0.00 0.00 4.58
226 227 2.230750 TGCATATCCTCTCTCTGCATCG 59.769 50.000 0.00 0.00 37.88 3.84
227 228 3.368635 CCTGCATATCCTCTCTCTGCATC 60.369 52.174 0.00 0.00 41.55 3.91
228 229 2.568062 CCTGCATATCCTCTCTCTGCAT 59.432 50.000 0.00 0.00 41.55 3.96
229 230 1.969208 CCTGCATATCCTCTCTCTGCA 59.031 52.381 0.00 0.00 40.29 4.41
230 231 1.338011 GCCTGCATATCCTCTCTCTGC 60.338 57.143 0.00 0.00 0.00 4.26
231 232 1.969208 TGCCTGCATATCCTCTCTCTG 59.031 52.381 0.00 0.00 0.00 3.35
232 233 2.368221 GTTGCCTGCATATCCTCTCTCT 59.632 50.000 0.00 0.00 0.00 3.10
233 234 2.549778 GGTTGCCTGCATATCCTCTCTC 60.550 54.545 0.00 0.00 0.00 3.20
234 235 1.419387 GGTTGCCTGCATATCCTCTCT 59.581 52.381 0.00 0.00 0.00 3.10
235 236 1.141657 TGGTTGCCTGCATATCCTCTC 59.858 52.381 0.00 0.00 0.00 3.20
236 237 1.216064 TGGTTGCCTGCATATCCTCT 58.784 50.000 0.00 0.00 0.00 3.69
237 238 1.678101 GTTGGTTGCCTGCATATCCTC 59.322 52.381 0.00 0.00 0.00 3.71
238 239 1.686115 GGTTGGTTGCCTGCATATCCT 60.686 52.381 0.00 0.00 0.00 3.24
239 240 0.746659 GGTTGGTTGCCTGCATATCC 59.253 55.000 0.00 0.00 0.00 2.59
240 241 1.473258 TGGTTGGTTGCCTGCATATC 58.527 50.000 0.00 0.00 0.00 1.63
241 242 1.935799 TTGGTTGGTTGCCTGCATAT 58.064 45.000 0.00 0.00 0.00 1.78
242 243 1.824230 GATTGGTTGGTTGCCTGCATA 59.176 47.619 0.00 0.00 0.00 3.14
243 244 0.609662 GATTGGTTGGTTGCCTGCAT 59.390 50.000 0.00 0.00 0.00 3.96
244 245 0.758310 TGATTGGTTGGTTGCCTGCA 60.758 50.000 0.00 0.00 0.00 4.41
245 246 0.392336 TTGATTGGTTGGTTGCCTGC 59.608 50.000 0.00 0.00 0.00 4.85
246 247 1.411977 TGTTGATTGGTTGGTTGCCTG 59.588 47.619 0.00 0.00 0.00 4.85
247 248 1.786937 TGTTGATTGGTTGGTTGCCT 58.213 45.000 0.00 0.00 0.00 4.75
248 249 2.415776 CATGTTGATTGGTTGGTTGCC 58.584 47.619 0.00 0.00 0.00 4.52
249 250 2.036992 TCCATGTTGATTGGTTGGTTGC 59.963 45.455 0.00 0.00 35.64 4.17
250 251 4.540359 ATCCATGTTGATTGGTTGGTTG 57.460 40.909 0.00 0.00 35.64 3.77
251 252 5.721000 ACATATCCATGTTGATTGGTTGGTT 59.279 36.000 0.00 0.00 42.98 3.67
252 253 5.271598 ACATATCCATGTTGATTGGTTGGT 58.728 37.500 0.00 0.00 42.98 3.67
253 254 5.857471 ACATATCCATGTTGATTGGTTGG 57.143 39.130 0.00 0.00 42.98 3.77
280 281 5.621197 ACTTGAGCATATGCACGTAAAAA 57.379 34.783 28.62 11.68 45.16 1.94
281 282 6.018262 GGATACTTGAGCATATGCACGTAAAA 60.018 38.462 28.62 12.02 45.16 1.52
282 283 5.465390 GGATACTTGAGCATATGCACGTAAA 59.535 40.000 28.62 12.35 45.16 2.01
283 284 4.988540 GGATACTTGAGCATATGCACGTAA 59.011 41.667 28.62 15.78 45.16 3.18
284 285 4.556233 GGATACTTGAGCATATGCACGTA 58.444 43.478 28.62 20.97 45.16 3.57
285 286 3.393800 GGATACTTGAGCATATGCACGT 58.606 45.455 28.62 19.70 45.16 4.49
301 302 7.028926 TCTTTCATTGACGAGACTAGGATAC 57.971 40.000 0.00 0.00 0.00 2.24
302 303 7.640597 TTCTTTCATTGACGAGACTAGGATA 57.359 36.000 0.00 0.00 0.00 2.59
303 304 6.531503 TTCTTTCATTGACGAGACTAGGAT 57.468 37.500 0.00 0.00 0.00 3.24
304 305 5.977489 TTCTTTCATTGACGAGACTAGGA 57.023 39.130 0.00 0.00 0.00 2.94
305 306 6.390721 TCTTTCTTTCATTGACGAGACTAGG 58.609 40.000 0.00 0.00 0.00 3.02
306 307 7.309177 TCTCTTTCTTTCATTGACGAGACTAG 58.691 38.462 0.00 0.00 0.00 2.57
307 308 7.175119 TCTCTCTTTCTTTCATTGACGAGACTA 59.825 37.037 0.00 0.00 0.00 2.59
308 309 6.015856 TCTCTCTTTCTTTCATTGACGAGACT 60.016 38.462 0.00 0.00 0.00 3.24
309 310 6.153067 TCTCTCTTTCTTTCATTGACGAGAC 58.847 40.000 0.00 0.00 0.00 3.36
310 311 6.332735 TCTCTCTTTCTTTCATTGACGAGA 57.667 37.500 0.00 0.00 0.00 4.04
311 312 5.576384 CCTCTCTCTTTCTTTCATTGACGAG 59.424 44.000 0.00 0.00 0.00 4.18
312 313 5.473931 CCTCTCTCTTTCTTTCATTGACGA 58.526 41.667 0.00 0.00 0.00 4.20
313 314 4.629200 CCCTCTCTCTTTCTTTCATTGACG 59.371 45.833 0.00 0.00 0.00 4.35
314 315 4.940654 CCCCTCTCTCTTTCTTTCATTGAC 59.059 45.833 0.00 0.00 0.00 3.18
315 316 4.566488 GCCCCTCTCTCTTTCTTTCATTGA 60.566 45.833 0.00 0.00 0.00 2.57
316 317 3.693578 GCCCCTCTCTCTTTCTTTCATTG 59.306 47.826 0.00 0.00 0.00 2.82
317 318 3.620966 CGCCCCTCTCTCTTTCTTTCATT 60.621 47.826 0.00 0.00 0.00 2.57
318 319 2.093235 CGCCCCTCTCTCTTTCTTTCAT 60.093 50.000 0.00 0.00 0.00 2.57
319 320 1.276421 CGCCCCTCTCTCTTTCTTTCA 59.724 52.381 0.00 0.00 0.00 2.69
320 321 1.276705 ACGCCCCTCTCTCTTTCTTTC 59.723 52.381 0.00 0.00 0.00 2.62
321 322 1.353091 ACGCCCCTCTCTCTTTCTTT 58.647 50.000 0.00 0.00 0.00 2.52
322 323 1.353091 AACGCCCCTCTCTCTTTCTT 58.647 50.000 0.00 0.00 0.00 2.52
323 324 1.353091 AAACGCCCCTCTCTCTTTCT 58.647 50.000 0.00 0.00 0.00 2.52
324 325 2.077627 GAAAACGCCCCTCTCTCTTTC 58.922 52.381 0.00 0.00 0.00 2.62
325 326 1.420138 TGAAAACGCCCCTCTCTCTTT 59.580 47.619 0.00 0.00 0.00 2.52
326 327 1.056660 TGAAAACGCCCCTCTCTCTT 58.943 50.000 0.00 0.00 0.00 2.85
327 328 1.056660 TTGAAAACGCCCCTCTCTCT 58.943 50.000 0.00 0.00 0.00 3.10
328 329 1.892209 TTTGAAAACGCCCCTCTCTC 58.108 50.000 0.00 0.00 0.00 3.20
329 330 2.230660 CTTTTGAAAACGCCCCTCTCT 58.769 47.619 0.00 0.00 0.00 3.10
330 331 1.954382 ACTTTTGAAAACGCCCCTCTC 59.046 47.619 0.00 0.00 0.00 3.20
331 332 1.681264 CACTTTTGAAAACGCCCCTCT 59.319 47.619 0.00 0.00 0.00 3.69
332 333 1.269569 CCACTTTTGAAAACGCCCCTC 60.270 52.381 0.00 0.00 0.00 4.30
333 334 0.750249 CCACTTTTGAAAACGCCCCT 59.250 50.000 0.00 0.00 0.00 4.79
334 335 0.878523 GCCACTTTTGAAAACGCCCC 60.879 55.000 0.00 0.00 0.00 5.80
335 336 0.179097 TGCCACTTTTGAAAACGCCC 60.179 50.000 0.00 0.00 0.00 6.13
336 337 0.927537 GTGCCACTTTTGAAAACGCC 59.072 50.000 0.00 0.00 0.00 5.68
337 338 1.634702 TGTGCCACTTTTGAAAACGC 58.365 45.000 0.00 0.00 0.00 4.84
338 339 2.602660 CCTTGTGCCACTTTTGAAAACG 59.397 45.455 0.00 0.00 0.00 3.60
339 340 2.935849 CCCTTGTGCCACTTTTGAAAAC 59.064 45.455 0.00 0.00 0.00 2.43
340 341 2.834549 TCCCTTGTGCCACTTTTGAAAA 59.165 40.909 0.00 0.00 0.00 2.29
341 342 2.167487 GTCCCTTGTGCCACTTTTGAAA 59.833 45.455 0.00 0.00 0.00 2.69
342 343 1.754226 GTCCCTTGTGCCACTTTTGAA 59.246 47.619 0.00 0.00 0.00 2.69
343 344 1.398692 GTCCCTTGTGCCACTTTTGA 58.601 50.000 0.00 0.00 0.00 2.69
344 345 0.389025 GGTCCCTTGTGCCACTTTTG 59.611 55.000 0.00 0.00 0.00 2.44
345 346 0.261696 AGGTCCCTTGTGCCACTTTT 59.738 50.000 0.00 0.00 0.00 2.27
346 347 0.468029 CAGGTCCCTTGTGCCACTTT 60.468 55.000 0.00 0.00 0.00 2.66
347 348 1.151450 CAGGTCCCTTGTGCCACTT 59.849 57.895 0.00 0.00 0.00 3.16
348 349 2.056906 GACAGGTCCCTTGTGCCACT 62.057 60.000 0.00 0.00 0.00 4.00
349 350 1.600916 GACAGGTCCCTTGTGCCAC 60.601 63.158 0.00 0.00 0.00 5.01
350 351 2.829384 GGACAGGTCCCTTGTGCCA 61.829 63.158 7.24 0.00 43.94 4.92
351 352 2.034221 GGACAGGTCCCTTGTGCC 59.966 66.667 7.24 0.00 43.94 5.01
360 361 3.069778 GACCCAGGTGGACAGGTC 58.930 66.667 0.00 0.00 41.87 3.85
361 362 1.843376 CAGACCCAGGTGGACAGGT 60.843 63.158 0.00 0.00 37.39 4.00
362 363 2.596851 CCAGACCCAGGTGGACAGG 61.597 68.421 0.00 0.00 35.67 4.00
363 364 2.596851 CCCAGACCCAGGTGGACAG 61.597 68.421 0.00 0.00 35.67 3.51
364 365 2.529136 CCCAGACCCAGGTGGACA 60.529 66.667 0.00 0.00 35.67 4.02
365 366 2.529389 ACCCAGACCCAGGTGGAC 60.529 66.667 0.00 0.00 35.67 4.02
371 372 3.650950 CACCCCACCCAGACCCAG 61.651 72.222 0.00 0.00 0.00 4.45
375 376 3.876255 TACCCCACCCCACCCAGAC 62.876 68.421 0.00 0.00 0.00 3.51
376 377 3.130153 TTACCCCACCCCACCCAGA 62.130 63.158 0.00 0.00 0.00 3.86
377 378 2.533232 TTACCCCACCCCACCCAG 60.533 66.667 0.00 0.00 0.00 4.45
378 379 2.533232 CTTACCCCACCCCACCCA 60.533 66.667 0.00 0.00 0.00 4.51
379 380 3.344176 CCTTACCCCACCCCACCC 61.344 72.222 0.00 0.00 0.00 4.61
380 381 3.344176 CCCTTACCCCACCCCACC 61.344 72.222 0.00 0.00 0.00 4.61
381 382 2.533492 ACCCTTACCCCACCCCAC 60.533 66.667 0.00 0.00 0.00 4.61
382 383 2.533232 CACCCTTACCCCACCCCA 60.533 66.667 0.00 0.00 0.00 4.96
383 384 3.344176 CCACCCTTACCCCACCCC 61.344 72.222 0.00 0.00 0.00 4.95
384 385 2.533492 ACCACCCTTACCCCACCC 60.533 66.667 0.00 0.00 0.00 4.61
954 4332 2.289820 CCTGCGAGTGATTGATTGATGG 59.710 50.000 0.00 0.00 0.00 3.51
955 4333 2.286831 GCCTGCGAGTGATTGATTGATG 60.287 50.000 0.00 0.00 0.00 3.07
956 4334 1.945394 GCCTGCGAGTGATTGATTGAT 59.055 47.619 0.00 0.00 0.00 2.57
957 4335 1.065926 AGCCTGCGAGTGATTGATTGA 60.066 47.619 0.00 0.00 0.00 2.57
1318 4712 6.373774 GGAACTGAACTGAAGATGTGATCATT 59.626 38.462 0.00 0.00 34.06 2.57
1494 4931 1.239347 GACCAGGGCTTTCAACTCAC 58.761 55.000 0.00 0.00 0.00 3.51
1506 4943 1.898574 GCCGGCAATATGACCAGGG 60.899 63.158 24.80 0.00 0.00 4.45
1610 5054 4.858850 ACACATTGCCTAGAATGGAATGA 58.141 39.130 15.25 0.00 37.60 2.57
1686 5130 7.944554 ACAGGGAAATCAATGAGAGACTTTTTA 59.055 33.333 0.00 0.00 0.00 1.52
1689 5133 5.885465 ACAGGGAAATCAATGAGAGACTTT 58.115 37.500 0.00 0.00 0.00 2.66
1743 5198 0.586802 GGTCTTGTTCCTTGACGTGC 59.413 55.000 0.00 0.00 0.00 5.34
1819 5274 5.590259 GCCATGTTTCAAGGTCATACTGTAT 59.410 40.000 0.00 0.00 0.00 2.29
1820 5275 4.941263 GCCATGTTTCAAGGTCATACTGTA 59.059 41.667 0.00 0.00 0.00 2.74
1821 5276 3.758554 GCCATGTTTCAAGGTCATACTGT 59.241 43.478 0.00 0.00 0.00 3.55
1822 5277 3.181507 CGCCATGTTTCAAGGTCATACTG 60.182 47.826 0.00 0.00 0.00 2.74
1823 5278 3.009723 CGCCATGTTTCAAGGTCATACT 58.990 45.455 0.00 0.00 0.00 2.12
1824 5279 3.006940 TCGCCATGTTTCAAGGTCATAC 58.993 45.455 0.00 0.00 0.00 2.39
1855 5323 2.105477 TCAAGAAAGAGGCAGCAAGAGT 59.895 45.455 0.00 0.00 0.00 3.24
1865 5333 4.455606 AGTTGAGTTGGTCAAGAAAGAGG 58.544 43.478 0.00 0.00 46.18 3.69
1909 5379 1.301716 GTTGACGAAGGCAGCCTGA 60.302 57.895 17.05 0.00 32.13 3.86
1954 5424 5.630415 AGATGCTTGTAAATAGGGCACTA 57.370 39.130 0.00 0.00 35.72 2.74
1985 5455 9.646427 CTAGAATCTACAAGGAAGTATATTGCC 57.354 37.037 0.00 0.00 0.00 4.52
2011 5481 4.319333 CGATGGCTTTTAGCATCACAGATC 60.319 45.833 0.67 0.00 44.75 2.75
2141 5651 5.107683 CGAGCAAGCTATAGATGTGTAAAGC 60.108 44.000 3.21 0.00 0.00 3.51
2255 5804 7.530010 ACACAAGTTGATCAGTTTATATGCAC 58.470 34.615 10.54 0.00 0.00 4.57
2369 5924 6.226787 AGCACATATAAGCAGTGGAGATAAC 58.773 40.000 0.00 0.00 33.98 1.89
2403 5960 7.056635 CCAAAAGGATTCAGCCTATTAGAGAA 58.943 38.462 0.00 0.00 37.26 2.87
2485 6059 9.671279 AACATATGATGTGAAGTGTGATTCTTA 57.329 29.630 10.38 0.00 44.07 2.10
2487 6061 7.066645 CCAACATATGATGTGAAGTGTGATTCT 59.933 37.037 10.38 0.00 44.07 2.40
2488 6062 7.066163 TCCAACATATGATGTGAAGTGTGATTC 59.934 37.037 10.38 0.00 44.07 2.52
2489 6063 6.885918 TCCAACATATGATGTGAAGTGTGATT 59.114 34.615 10.38 0.00 44.07 2.57
2624 6208 9.638239 GAATCACTTTGGAAGCAACAAATATAA 57.362 29.630 1.77 0.00 37.22 0.98
2652 6236 7.206981 AGGAATATCCAAAGCATAAACATCG 57.793 36.000 0.00 0.00 39.61 3.84
2723 6307 7.240674 GTGCATCGTTCAAAAGATATGTGTTA 58.759 34.615 0.00 0.00 0.00 2.41
2760 6344 7.446001 AAAGAATGCAAACACAAAAGGAAAA 57.554 28.000 0.00 0.00 0.00 2.29
2794 6382 6.254157 CAGACACAAAATGGAAAACAAGTGAG 59.746 38.462 0.00 0.00 0.00 3.51
2842 6430 7.987458 TGGTTCTTTATTTACCATGCACAAAAA 59.013 29.630 0.00 0.00 37.04 1.94
2843 6431 7.439655 GTGGTTCTTTATTTACCATGCACAAAA 59.560 33.333 0.00 0.00 43.33 2.44
2844 6432 6.926272 GTGGTTCTTTATTTACCATGCACAAA 59.074 34.615 0.00 0.00 43.33 2.83
2845 6433 6.266558 AGTGGTTCTTTATTTACCATGCACAA 59.733 34.615 0.00 0.00 43.33 3.33
2846 6434 5.772672 AGTGGTTCTTTATTTACCATGCACA 59.227 36.000 0.00 0.00 43.33 4.57
2847 6435 6.267496 AGTGGTTCTTTATTTACCATGCAC 57.733 37.500 0.00 0.00 43.33 4.57
2848 6436 7.284489 GGATAGTGGTTCTTTATTTACCATGCA 59.716 37.037 0.00 0.00 43.33 3.96
2849 6437 7.255486 GGGATAGTGGTTCTTTATTTACCATGC 60.255 40.741 0.00 0.00 43.33 4.06
2850 6438 7.041372 CGGGATAGTGGTTCTTTATTTACCATG 60.041 40.741 0.00 0.00 43.33 3.66
2851 6439 6.996282 CGGGATAGTGGTTCTTTATTTACCAT 59.004 38.462 0.00 0.00 43.33 3.55
2852 6440 6.350906 CGGGATAGTGGTTCTTTATTTACCA 58.649 40.000 0.00 0.00 39.53 3.25
2853 6441 5.761726 CCGGGATAGTGGTTCTTTATTTACC 59.238 44.000 0.00 0.00 0.00 2.85
2854 6442 6.351711 ACCGGGATAGTGGTTCTTTATTTAC 58.648 40.000 6.32 0.00 33.81 2.01
2855 6443 6.384886 AGACCGGGATAGTGGTTCTTTATTTA 59.615 38.462 6.32 0.00 38.99 1.40
2856 6444 5.191124 AGACCGGGATAGTGGTTCTTTATTT 59.809 40.000 6.32 0.00 38.99 1.40
2857 6445 4.720273 AGACCGGGATAGTGGTTCTTTATT 59.280 41.667 6.32 0.00 38.99 1.40
2858 6446 4.101119 CAGACCGGGATAGTGGTTCTTTAT 59.899 45.833 6.32 0.00 38.99 1.40
2859 6447 3.449737 CAGACCGGGATAGTGGTTCTTTA 59.550 47.826 6.32 0.00 38.99 1.85
2860 6448 2.236395 CAGACCGGGATAGTGGTTCTTT 59.764 50.000 6.32 0.00 38.99 2.52
2861 6449 1.831736 CAGACCGGGATAGTGGTTCTT 59.168 52.381 6.32 0.00 38.99 2.52
2978 6573 2.690326 GTGTTCAACACTGGAGCGT 58.310 52.632 13.77 0.00 45.27 5.07
3035 6630 2.086869 CATTTGTCAATGACGAGGCCT 58.913 47.619 3.86 3.86 42.35 5.19
3300 6914 9.996554 CTTTTCAAAGGAACCTTGGTTATTAAT 57.003 29.630 6.88 0.00 36.26 1.40
3326 6940 9.087424 GATTCAACTAAAACTTTGGCCAATATC 57.913 33.333 21.26 0.00 0.00 1.63
3372 6986 5.068723 GCACTACAGAGGTATTACAGGCTAA 59.931 44.000 0.00 0.00 0.00 3.09
3388 7002 4.686554 GTGGAACAGAACTTAGCACTACAG 59.313 45.833 0.00 0.00 41.80 2.74
3638 7255 0.924090 GCCGAACATAGTCTGCGAAG 59.076 55.000 0.00 0.00 0.00 3.79
3644 7261 3.195610 TGTCAAGATGCCGAACATAGTCT 59.804 43.478 0.00 0.00 39.84 3.24
3647 7264 3.684305 TGTTGTCAAGATGCCGAACATAG 59.316 43.478 0.00 0.00 39.84 2.23
3652 7269 2.226200 CACATGTTGTCAAGATGCCGAA 59.774 45.455 19.72 0.00 35.71 4.30
3683 7300 6.115446 GGATTTGTCACTGATGAGATACCAA 58.885 40.000 0.00 0.00 34.75 3.67
3696 7313 9.308000 TCAAATTATTTACCTGGATTTGTCACT 57.692 29.630 0.00 0.00 38.31 3.41
3718 7335 1.243902 GTGAGAAATGGGCGGTCAAA 58.756 50.000 0.00 0.00 0.00 2.69
3782 7401 4.900635 AAGCTTGATTGTTGACGTTCTT 57.099 36.364 0.00 0.00 0.00 2.52
3887 7511 2.297315 TCAACTTCACTGTCTGCGAGAT 59.703 45.455 0.00 0.00 0.00 2.75
3970 7594 5.942961 TCCTGGTATAAAAACAACTGGTGA 58.057 37.500 0.00 0.00 0.00 4.02
4114 7738 4.446371 CAAGGCCACCTCTATAACTGAAG 58.554 47.826 5.01 0.00 30.89 3.02
4181 7805 8.270744 AGATATCTTCCACAATATCCATAAGCC 58.729 37.037 0.00 0.00 36.10 4.35
4213 7838 4.177026 AGTAGCTAACAAATGCAGACTCG 58.823 43.478 0.00 0.00 0.00 4.18
4280 7911 2.649331 ACGTGGTCCTCAAACTATCG 57.351 50.000 0.00 0.00 0.00 2.92
4295 7926 0.664166 GCCTCCACAATGCAAACGTG 60.664 55.000 0.00 0.00 0.00 4.49
4298 7929 2.352715 GGTTAGCCTCCACAATGCAAAC 60.353 50.000 0.00 0.00 0.00 2.93
4345 7984 3.211045 ACACGTCACTGTAAAAGCCAAT 58.789 40.909 0.00 0.00 0.00 3.16
4524 8171 2.945008 ACTTGTGTGTGTCCAACAGATG 59.055 45.455 0.00 0.00 40.26 2.90
4534 8181 4.640201 ACTCAAATGCTTACTTGTGTGTGT 59.360 37.500 0.00 0.00 30.37 3.72
4600 8248 3.930634 AGGATTCTGCTCAAAAGTTGC 57.069 42.857 0.00 0.00 0.00 4.17
4601 8249 6.152379 GGTTTAGGATTCTGCTCAAAAGTTG 58.848 40.000 0.00 0.00 0.00 3.16
4608 8256 5.241403 TCTTTGGTTTAGGATTCTGCTCA 57.759 39.130 0.00 0.00 0.00 4.26
4609 8257 6.558909 CATTCTTTGGTTTAGGATTCTGCTC 58.441 40.000 0.00 0.00 0.00 4.26
4615 8263 5.779771 TCCTTGCATTCTTTGGTTTAGGATT 59.220 36.000 0.00 0.00 0.00 3.01
4625 8273 4.053295 CCACTTGTTCCTTGCATTCTTTG 58.947 43.478 0.00 0.00 0.00 2.77
4664 8312 5.593679 TTCTTCACTCGGTATCTTAAGGG 57.406 43.478 1.85 0.00 0.00 3.95
4736 8384 5.245977 ACTTGAATTTCACCCCCTACATTTG 59.754 40.000 0.00 0.00 0.00 2.32
4744 8392 3.230976 AGTCAACTTGAATTTCACCCCC 58.769 45.455 0.00 0.00 0.00 5.40
4759 8407 0.100503 AAGGTGTGCGCAAAGTCAAC 59.899 50.000 14.00 9.02 0.00 3.18
4764 8412 0.665835 TACCAAAGGTGTGCGCAAAG 59.334 50.000 14.00 0.00 36.19 2.77
4816 8464 3.235179 GCGCTCGTGTTTGATTTTATTCG 59.765 43.478 0.00 0.00 0.00 3.34
4843 8491 2.877168 AGCATCTTGAGAAATCGCCATC 59.123 45.455 0.00 0.00 0.00 3.51
4936 8619 0.746063 CTGCACCCAACACAACACAT 59.254 50.000 0.00 0.00 0.00 3.21
4937 8620 0.610509 ACTGCACCCAACACAACACA 60.611 50.000 0.00 0.00 0.00 3.72
4938 8621 0.530288 AACTGCACCCAACACAACAC 59.470 50.000 0.00 0.00 0.00 3.32
4996 8687 7.315142 CCTGCACATCAACATACATAAAACTT 58.685 34.615 0.00 0.00 0.00 2.66
5096 8849 2.165437 AGCGTCTCTCTCCATCTTCAAC 59.835 50.000 0.00 0.00 0.00 3.18
5114 8867 0.532573 TAGAGCAACTCCTTCCAGCG 59.467 55.000 0.00 0.00 0.00 5.18
5115 8868 2.770164 TTAGAGCAACTCCTTCCAGC 57.230 50.000 0.00 0.00 0.00 4.85
5117 8870 4.985538 ACAAATTAGAGCAACTCCTTCCA 58.014 39.130 0.00 0.00 0.00 3.53
5118 8871 5.703876 CAACAAATTAGAGCAACTCCTTCC 58.296 41.667 0.00 0.00 0.00 3.46
5119 8872 5.048434 AGCAACAAATTAGAGCAACTCCTTC 60.048 40.000 0.00 0.00 0.00 3.46
5120 8873 4.829492 AGCAACAAATTAGAGCAACTCCTT 59.171 37.500 0.00 0.00 0.00 3.36
5146 8901 8.633561 CATATAACTCATCACTGTCAAGACCTA 58.366 37.037 0.00 0.00 0.00 3.08
5147 8902 7.124901 ACATATAACTCATCACTGTCAAGACCT 59.875 37.037 0.00 0.00 0.00 3.85
5281 9036 4.104383 TGCCATCAGGGAGGAATAATTC 57.896 45.455 0.00 0.00 40.01 2.17
5353 9113 9.599866 AACTGATTTCTTCATCGTCATATGTAA 57.400 29.630 1.90 0.00 32.72 2.41
5359 9119 7.206981 ACAAAACTGATTTCTTCATCGTCAT 57.793 32.000 0.00 0.00 32.72 3.06
5378 9138 5.631512 GCGCACCACAAAATAAGATACAAAA 59.368 36.000 0.30 0.00 0.00 2.44
5396 9156 1.874320 GCTTATAGGAAGAGGCGCACC 60.874 57.143 10.83 4.14 0.00 5.01
5421 9181 1.613925 TGCTCGATAGTGATAGTGGGC 59.386 52.381 0.00 0.00 37.40 5.36
5430 9190 2.101415 TCATGGACCTTGCTCGATAGTG 59.899 50.000 2.42 0.00 37.40 2.74
5469 9229 0.323178 ACCAAGAGCCATGGAGCTTG 60.323 55.000 27.34 27.34 45.15 4.01
5474 9234 4.314522 TTCAAATACCAAGAGCCATGGA 57.685 40.909 18.40 0.00 40.56 3.41
5503 9263 1.262151 GAGCAACGGAAGCGTGTTTTA 59.738 47.619 0.00 0.00 37.01 1.52
5511 9271 3.375299 AGATATGTTTGAGCAACGGAAGC 59.625 43.478 0.00 0.00 38.36 3.86
5546 9306 7.733047 ACCATAGGGATATGTGTATGTACTCAA 59.267 37.037 0.00 0.00 38.05 3.02
5550 9310 6.405508 CGGACCATAGGGATATGTGTATGTAC 60.406 46.154 0.00 0.00 38.05 2.90
5561 9321 5.847817 AGATTTTTACCGGACCATAGGGATA 59.152 40.000 9.46 0.00 38.05 2.59
5572 9332 6.963083 TTCTTTTTCCAGATTTTTACCGGA 57.037 33.333 9.46 0.00 0.00 5.14
5573 9333 9.135843 GTATTTCTTTTTCCAGATTTTTACCGG 57.864 33.333 0.00 0.00 0.00 5.28
5574 9334 9.908152 AGTATTTCTTTTTCCAGATTTTTACCG 57.092 29.630 0.00 0.00 0.00 4.02
5686 9455 5.710099 TCTGGTTTTGTTTTGGGCTATAGAG 59.290 40.000 3.21 0.00 0.00 2.43
5687 9456 5.636123 TCTGGTTTTGTTTTGGGCTATAGA 58.364 37.500 3.21 0.00 0.00 1.98
5688 9457 5.975693 TCTGGTTTTGTTTTGGGCTATAG 57.024 39.130 0.00 0.00 0.00 1.31
5689 9458 6.926630 AATCTGGTTTTGTTTTGGGCTATA 57.073 33.333 0.00 0.00 0.00 1.31
5700 9469 5.826208 AGTTTCGGTAGAAATCTGGTTTTGT 59.174 36.000 0.00 0.00 46.64 2.83
5704 9473 4.215613 GCAAGTTTCGGTAGAAATCTGGTT 59.784 41.667 0.00 0.00 46.64 3.67
5716 9485 0.470766 TACCTGTGGCAAGTTTCGGT 59.529 50.000 0.00 0.00 0.00 4.69
5719 9488 1.135689 CGCATACCTGTGGCAAGTTTC 60.136 52.381 0.00 0.00 0.00 2.78
5731 9500 3.838317 ACATATACACATCCCGCATACCT 59.162 43.478 0.00 0.00 0.00 3.08
5739 9508 2.289444 CGGGGACACATATACACATCCC 60.289 54.545 0.00 0.00 44.42 3.85
5740 9509 2.289444 CCGGGGACACATATACACATCC 60.289 54.545 0.00 0.00 0.00 3.51
5741 9510 2.289444 CCCGGGGACACATATACACATC 60.289 54.545 14.71 0.00 0.00 3.06
5742 9511 1.697432 CCCGGGGACACATATACACAT 59.303 52.381 14.71 0.00 0.00 3.21
5743 9512 1.124780 CCCGGGGACACATATACACA 58.875 55.000 14.71 0.00 0.00 3.72
5744 9513 0.395312 CCCCGGGGACACATATACAC 59.605 60.000 38.41 0.00 37.50 2.90
5745 9514 0.265254 TCCCCGGGGACACATATACA 59.735 55.000 39.67 12.82 39.76 2.29
5746 9515 1.426751 TTCCCCGGGGACACATATAC 58.573 55.000 42.89 0.00 45.11 1.47
5747 9516 2.193566 TTTCCCCGGGGACACATATA 57.806 50.000 42.89 23.47 45.11 0.86
5748 9517 1.300927 TTTTCCCCGGGGACACATAT 58.699 50.000 42.89 0.00 45.11 1.78
5749 9518 1.300927 ATTTTCCCCGGGGACACATA 58.699 50.000 42.89 25.17 45.11 2.29
5750 9519 0.411848 AATTTTCCCCGGGGACACAT 59.588 50.000 42.89 28.84 45.11 3.21
5751 9520 0.188834 AAATTTTCCCCGGGGACACA 59.811 50.000 42.89 27.91 45.11 3.72
5752 9521 0.892755 GAAATTTTCCCCGGGGACAC 59.107 55.000 42.89 23.40 45.11 3.67
5753 9522 0.483328 TGAAATTTTCCCCGGGGACA 59.517 50.000 42.89 34.11 45.11 4.02
5754 9523 0.892755 GTGAAATTTTCCCCGGGGAC 59.107 55.000 42.89 28.63 45.11 4.46
5755 9524 0.483328 TGTGAAATTTTCCCCGGGGA 59.517 50.000 39.67 39.67 43.52 4.81
5756 9525 1.567357 ATGTGAAATTTTCCCCGGGG 58.433 50.000 35.80 35.80 0.00 5.73
5757 9526 2.301583 ACAATGTGAAATTTTCCCCGGG 59.698 45.455 15.80 15.80 0.00 5.73
5758 9527 3.676291 ACAATGTGAAATTTTCCCCGG 57.324 42.857 6.68 0.00 0.00 5.73
5759 9528 5.525378 TCAAAACAATGTGAAATTTTCCCCG 59.475 36.000 6.68 0.00 0.00 5.73
5760 9529 6.934048 TCAAAACAATGTGAAATTTTCCCC 57.066 33.333 6.68 0.00 0.00 4.81
5779 9548 9.265901 TGAAAGTCATGTTTTTCAAGTTTCAAA 57.734 25.926 18.40 0.00 39.57 2.69
5813 9583 3.326297 AGCTCCAGTGCCCTCTATATTTC 59.674 47.826 0.00 0.00 0.00 2.17
5824 9594 4.767255 CACCCGAGCTCCAGTGCC 62.767 72.222 15.57 0.00 0.00 5.01
5829 9599 3.461773 GCTAGCACCCGAGCTCCA 61.462 66.667 10.63 0.00 45.26 3.86
5991 9761 6.735694 GCCCAACGCATTCATTTCTGTTATAT 60.736 38.462 0.00 0.00 37.47 0.86
5992 9762 5.449862 GCCCAACGCATTCATTTCTGTTATA 60.450 40.000 0.00 0.00 37.47 0.98
5994 9764 3.366883 GCCCAACGCATTCATTTCTGTTA 60.367 43.478 0.00 0.00 37.47 2.41
5995 9765 2.610232 GCCCAACGCATTCATTTCTGTT 60.610 45.455 0.00 0.00 37.47 3.16
5997 9767 1.203052 AGCCCAACGCATTCATTTCTG 59.797 47.619 0.00 0.00 41.38 3.02
5999 9769 1.994779 CAAGCCCAACGCATTCATTTC 59.005 47.619 0.00 0.00 41.38 2.17
6002 9772 0.611618 TCCAAGCCCAACGCATTCAT 60.612 50.000 0.00 0.00 41.38 2.57
6003 9773 0.611618 ATCCAAGCCCAACGCATTCA 60.612 50.000 0.00 0.00 41.38 2.57
6004 9774 0.179129 CATCCAAGCCCAACGCATTC 60.179 55.000 0.00 0.00 41.38 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.