Multiple sequence alignment - TraesCS4B01G338800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G338800 chr4B 100.000 5585 0 0 1 5585 631836597 631842181 0.000000e+00 10314.0
1 TraesCS4B01G338800 chr4B 91.412 1537 79 15 797 2309 632125879 632124372 0.000000e+00 2058.0
2 TraesCS4B01G338800 chr4B 94.424 556 28 1 1025 1577 631899433 631898878 0.000000e+00 852.0
3 TraesCS4B01G338800 chr4B 83.480 684 65 26 1990 2659 631898486 631897837 1.340000e-165 593.0
4 TraesCS4B01G338800 chr4B 90.826 109 9 1 667 775 632126355 632126248 1.620000e-30 145.0
5 TraesCS4B01G338800 chr4B 91.000 100 7 2 4870 4968 104337330 104337428 3.510000e-27 134.0
6 TraesCS4B01G338800 chr4B 79.870 154 16 9 484 625 439316287 439316137 1.280000e-16 99.0
7 TraesCS4B01G338800 chr5A 89.373 2503 179 40 930 3406 673184966 673187407 0.000000e+00 3068.0
8 TraesCS4B01G338800 chr5A 87.607 815 80 15 4070 4871 673188349 673189155 0.000000e+00 926.0
9 TraesCS4B01G338800 chr5A 92.960 625 41 3 2 625 673182759 673183381 0.000000e+00 907.0
10 TraesCS4B01G338800 chr5A 89.408 642 40 10 1012 1651 673237854 673237239 0.000000e+00 784.0
11 TraesCS4B01G338800 chr5A 84.897 682 54 17 1990 2659 673236912 673236268 1.310000e-180 643.0
12 TraesCS4B01G338800 chr5A 90.732 205 7 2 5338 5542 673189424 673189616 4.290000e-66 263.0
13 TraesCS4B01G338800 chr5A 82.623 305 20 12 4954 5258 673189156 673189427 7.230000e-59 239.0
14 TraesCS4B01G338800 chr5A 87.565 193 11 3 667 846 673184766 673184958 1.580000e-50 211.0
15 TraesCS4B01G338800 chr5A 85.294 204 16 7 3826 4016 673188132 673188334 1.230000e-46 198.0
16 TraesCS4B01G338800 chr5A 82.209 163 22 5 3514 3672 558960169 558960328 3.510000e-27 134.0
17 TraesCS4B01G338800 chr5A 83.704 135 20 2 490 624 524195710 524195578 5.870000e-25 126.0
18 TraesCS4B01G338800 chr5A 84.000 125 16 3 3547 3669 239529944 239530066 3.540000e-22 117.0
19 TraesCS4B01G338800 chr4D 91.431 1307 56 18 667 1961 493907199 493908461 0.000000e+00 1742.0
20 TraesCS4B01G338800 chr4D 92.332 626 45 3 1 624 493906158 493906782 0.000000e+00 887.0
21 TraesCS4B01G338800 chr4D 90.581 637 33 14 958 1574 493924195 493923566 0.000000e+00 819.0
22 TraesCS4B01G338800 chr4D 82.500 920 104 25 1990 2892 493923187 493922308 0.000000e+00 754.0
23 TraesCS4B01G338800 chr4D 86.996 669 47 15 1999 2655 493908466 493909106 0.000000e+00 717.0
24 TraesCS4B01G338800 chr4D 87.879 198 16 4 5340 5536 493919702 493919512 5.630000e-55 226.0
25 TraesCS4B01G338800 chr4D 86.131 137 18 1 487 623 120075374 120075239 4.510000e-31 147.0
26 TraesCS4B01G338800 chr2D 90.640 1015 75 7 2438 3452 459104696 459105690 0.000000e+00 1330.0
27 TraesCS4B01G338800 chr2D 91.119 563 38 9 4314 4875 459106070 459106621 0.000000e+00 752.0
28 TraesCS4B01G338800 chr2D 91.667 348 21 6 1945 2287 459045888 459046232 5.060000e-130 475.0
29 TraesCS4B01G338800 chr2D 91.456 316 19 4 1645 1960 459045449 459045756 1.440000e-115 427.0
30 TraesCS4B01G338800 chr2D 91.209 182 13 2 3453 3634 459105818 459105996 1.550000e-60 244.0
31 TraesCS4B01G338800 chr2D 92.373 118 6 2 2284 2400 459046398 459046513 1.240000e-36 165.0
32 TraesCS4B01G338800 chr2D 97.468 79 1 1 1080 1157 459038080 459038158 3.510000e-27 134.0
33 TraesCS4B01G338800 chr2D 90.625 96 8 1 4867 4962 217496904 217496998 5.870000e-25 126.0
34 TraesCS4B01G338800 chr2D 91.667 48 4 0 668 715 459037487 459037534 3.610000e-07 67.6
35 TraesCS4B01G338800 chr2B 92.185 627 47 2 2823 3448 540306250 540306875 0.000000e+00 885.0
36 TraesCS4B01G338800 chr2B 88.202 534 38 8 1056 1573 540255851 540256375 1.030000e-171 614.0
37 TraesCS4B01G338800 chr2B 87.912 546 34 11 4314 4854 540307425 540307943 1.030000e-171 614.0
38 TraesCS4B01G338800 chr2B 86.194 268 17 7 3453 3720 540307171 540307418 7.130000e-69 272.0
39 TraesCS4B01G338800 chr2B 94.815 135 7 0 1439 1573 220520212 220520346 1.580000e-50 211.0
40 TraesCS4B01G338800 chr2B 87.151 179 14 4 1645 1822 220520360 220520530 1.590000e-45 195.0
41 TraesCS4B01G338800 chr2B 86.957 138 18 0 487 624 61289180 61289043 7.490000e-34 156.0
42 TraesCS4B01G338800 chr2B 87.050 139 16 2 487 624 61360704 61360567 7.490000e-34 156.0
43 TraesCS4B01G338800 chr2B 96.610 59 2 0 1 59 357252576 357252634 1.280000e-16 99.0
44 TraesCS4B01G338800 chr2B 97.500 40 1 0 1267 1306 220520172 220520211 1.000000e-07 69.4
45 TraesCS4B01G338800 chr6B 97.849 93 2 0 5249 5341 115045675 115045767 1.610000e-35 161.0
46 TraesCS4B01G338800 chr5B 98.876 89 1 0 5255 5343 33627051 33626963 5.790000e-35 159.0
47 TraesCS4B01G338800 chr7D 95.876 97 4 0 5244 5340 622185159 622185063 2.080000e-34 158.0
48 TraesCS4B01G338800 chr3B 96.809 94 3 0 5247 5340 421670593 421670500 2.080000e-34 158.0
49 TraesCS4B01G338800 chr3B 92.391 92 6 1 4868 4959 104711992 104712082 4.540000e-26 130.0
50 TraesCS4B01G338800 chr3B 79.508 122 24 1 504 625 40199533 40199413 9.970000e-13 86.1
51 TraesCS4B01G338800 chr1B 97.802 91 2 0 5252 5342 352885042 352884952 2.080000e-34 158.0
52 TraesCS4B01G338800 chr1B 96.774 62 2 0 1 62 49821566 49821505 2.750000e-18 104.0
53 TraesCS4B01G338800 chr2A 97.778 90 2 0 5253 5342 187514382 187514293 7.490000e-34 156.0
54 TraesCS4B01G338800 chr2A 85.124 121 11 7 4847 4962 456496748 456496630 3.540000e-22 117.0
55 TraesCS4B01G338800 chr1D 96.774 93 3 0 5253 5345 446425092 446425000 7.490000e-34 156.0
56 TraesCS4B01G338800 chr7A 94.845 97 5 0 5247 5343 32008563 32008467 9.690000e-33 152.0
57 TraesCS4B01G338800 chr5D 84.615 156 19 4 3516 3669 285256713 285256865 3.490000e-32 150.0
58 TraesCS4B01G338800 chr5D 89.109 101 8 3 4858 4956 431293725 431293824 7.600000e-24 122.0
59 TraesCS4B01G338800 chr6A 92.929 99 7 0 5253 5351 616776285 616776383 1.620000e-30 145.0
60 TraesCS4B01G338800 chr6A 83.459 133 22 0 489 621 1742836 1742968 2.110000e-24 124.0
61 TraesCS4B01G338800 chr6D 93.617 94 5 1 4870 4963 423213882 423213790 7.540000e-29 139.0
62 TraesCS4B01G338800 chr6D 81.098 164 30 1 3516 3679 408903022 408903184 4.540000e-26 130.0
63 TraesCS4B01G338800 chr6D 83.453 139 18 5 3514 3649 418157662 418157526 2.110000e-24 124.0
64 TraesCS4B01G338800 chr4A 94.318 88 3 2 4869 4956 62556959 62557044 3.510000e-27 134.0
65 TraesCS4B01G338800 chr4A 91.667 96 6 2 4868 4963 30142441 30142348 1.260000e-26 132.0
66 TraesCS4B01G338800 chr3D 90.909 99 7 2 4870 4968 526509381 526509285 1.260000e-26 132.0
67 TraesCS4B01G338800 chr3A 81.250 160 23 6 3516 3673 561716056 561716210 7.600000e-24 122.0
68 TraesCS4B01G338800 chr3A 82.927 123 19 2 3549 3671 72407055 72407175 5.920000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G338800 chr4B 631836597 631842181 5584 False 10314.000000 10314 100.000000 1 5585 1 chr4B.!!$F2 5584
1 TraesCS4B01G338800 chr4B 632124372 632126355 1983 True 1101.500000 2058 91.119000 667 2309 2 chr4B.!!$R3 1642
2 TraesCS4B01G338800 chr4B 631897837 631899433 1596 True 722.500000 852 88.952000 1025 2659 2 chr4B.!!$R2 1634
3 TraesCS4B01G338800 chr5A 673182759 673189616 6857 False 830.285714 3068 88.022000 2 5542 7 chr5A.!!$F3 5540
4 TraesCS4B01G338800 chr5A 673236268 673237854 1586 True 713.500000 784 87.152500 1012 2659 2 chr5A.!!$R2 1647
5 TraesCS4B01G338800 chr4D 493906158 493909106 2948 False 1115.333333 1742 90.253000 1 2655 3 chr4D.!!$F1 2654
6 TraesCS4B01G338800 chr4D 493919512 493924195 4683 True 599.666667 819 86.986667 958 5536 3 chr4D.!!$R2 4578
7 TraesCS4B01G338800 chr2D 459104696 459106621 1925 False 775.333333 1330 90.989333 2438 4875 3 chr2D.!!$F4 2437
8 TraesCS4B01G338800 chr2D 459045449 459046513 1064 False 355.666667 475 91.832000 1645 2400 3 chr2D.!!$F3 755
9 TraesCS4B01G338800 chr2B 540255851 540256375 524 False 614.000000 614 88.202000 1056 1573 1 chr2B.!!$F2 517
10 TraesCS4B01G338800 chr2B 540306250 540307943 1693 False 590.333333 885 88.763667 2823 4854 3 chr2B.!!$F4 2031

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
48 49 0.032130 GTCTGTGCGAGTCACCTTCA 59.968 55.000 0.00 0.00 45.03 3.02 F
101 102 0.699231 AGGGGGATTCTTGGCCTAGG 60.699 60.000 14.51 3.67 0.00 3.02 F
1459 3213 0.108329 CCGACCGCAACCTCAAGTAT 60.108 55.000 0.00 0.00 0.00 2.12 F
1585 3342 0.037734 TCAGGTAGCAGTCTGGTCGA 59.962 55.000 8.05 0.00 0.00 4.20 F
1587 3344 0.038455 AGGTAGCAGTCTGGTCGAGT 59.962 55.000 8.05 0.00 0.00 4.18 F
2625 4815 1.000938 GTTTGCAAGCTGGTCTGGAAG 60.001 52.381 5.98 0.00 0.00 3.46 F
4312 7371 0.397394 ATATGCACATTGCCTGCCCA 60.397 50.000 0.00 0.00 44.23 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1222 2968 2.601504 CCTGCGAGCGATTGATTGATTG 60.602 50.00 0.00 0.0 0.00 2.67 R
1575 3332 2.748532 GCTAGTGTTACTCGACCAGACT 59.251 50.00 0.00 0.0 0.00 3.24 R
2460 4631 0.109689 GACAGTAAGTCGAGCGCAGT 60.110 55.00 11.47 0.0 37.53 4.40 R
3409 5656 0.178767 CTGCACCCGAGATGATGGAA 59.821 55.00 0.00 0.0 0.00 3.53 R
3585 6295 4.277476 TGAAATGAGTGAACAAACCCACT 58.723 39.13 0.00 0.0 45.37 4.00 R
4495 7559 1.160329 GCACCTGCAACGAGTTCACT 61.160 55.00 0.00 0.0 41.59 3.41 R
5560 8739 0.179045 GATCCACTGCGGGCTGTTAT 60.179 55.00 0.00 0.0 34.36 1.89 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.077300 TGAAAATGAGTCAGCTGTCTGT 57.923 40.909 18.41 4.08 41.10 3.41
48 49 0.032130 GTCTGTGCGAGTCACCTTCA 59.968 55.000 0.00 0.00 45.03 3.02
76 77 2.701951 TCCGAGTAAGTGGTTTTGTCCT 59.298 45.455 0.00 0.00 0.00 3.85
77 78 3.135167 TCCGAGTAAGTGGTTTTGTCCTT 59.865 43.478 0.00 0.00 0.00 3.36
101 102 0.699231 AGGGGGATTCTTGGCCTAGG 60.699 60.000 14.51 3.67 0.00 3.02
149 150 3.459227 TGGATCACATTGCAATCTCCCTA 59.541 43.478 9.53 0.00 0.00 3.53
173 174 9.233649 CTATCGTGTCTAGGGTCTTTTCTATAT 57.766 37.037 0.00 0.00 0.00 0.86
183 184 7.753630 AGGGTCTTTTCTATATAGTACTCCGA 58.246 38.462 9.58 0.00 0.00 4.55
184 185 7.665145 AGGGTCTTTTCTATATAGTACTCCGAC 59.335 40.741 9.58 9.35 0.00 4.79
220 221 2.632512 GCATTTCTTTGGGGTCCTTTCA 59.367 45.455 0.00 0.00 0.00 2.69
229 230 2.983192 TGGGGTCCTTTCACAGATGTAA 59.017 45.455 0.00 0.00 0.00 2.41
270 272 1.829096 TCCACGTCGTTCTGGACCA 60.829 57.895 0.00 0.00 31.20 4.02
431 433 6.533367 GCATATTTTGGCGGACATTTTTCTAA 59.467 34.615 0.00 0.00 0.00 2.10
446 448 6.963049 TTTTTCTAATTACTCGAGCCTGAC 57.037 37.500 13.61 0.00 0.00 3.51
495 497 4.394610 TCAAATACAATGCATGCTACACGT 59.605 37.500 20.33 11.08 0.00 4.49
595 598 6.799512 GCAACATAGGTCTTATTGCAGAAAT 58.200 36.000 2.54 0.00 44.01 2.17
600 603 9.860898 ACATAGGTCTTATTGCAGAAATTTTTC 57.139 29.630 0.00 0.00 37.45 2.29
624 628 4.796946 GCAATGGTGATCTTGTTGCAGAAA 60.797 41.667 15.67 0.00 43.33 2.52
625 629 3.988379 TGGTGATCTTGTTGCAGAAAC 57.012 42.857 0.00 0.00 39.41 2.78
648 1547 2.599973 GCAAAATAAATCGCCAGCAGTG 59.400 45.455 0.00 0.00 0.00 3.66
710 2061 3.739922 TGGCATAGGACACCTGGG 58.260 61.111 0.00 0.00 34.61 4.45
768 2127 4.386711 ACGTTTTCAGAAAAGTAGAGGGG 58.613 43.478 8.67 0.00 36.03 4.79
770 2129 4.399219 GTTTTCAGAAAAGTAGAGGGGCT 58.601 43.478 8.67 0.00 0.00 5.19
775 2134 6.195600 TCAGAAAAGTAGAGGGGCTTTTTA 57.804 37.500 0.00 0.00 42.71 1.52
777 2136 6.715264 TCAGAAAAGTAGAGGGGCTTTTTAAG 59.285 38.462 0.00 0.00 42.71 1.85
852 2558 2.363925 GGGCTAGGTGGAGTCCGT 60.364 66.667 4.30 0.00 29.80 4.69
857 2563 1.611261 TAGGTGGAGTCCGTTGGGG 60.611 63.158 4.30 0.00 37.02 4.96
895 2606 3.875571 CCTCCTCTACATATTTCCCCCT 58.124 50.000 0.00 0.00 0.00 4.79
897 2608 4.042187 CCTCCTCTACATATTTCCCCCTTG 59.958 50.000 0.00 0.00 0.00 3.61
900 2611 4.505742 CCTCTACATATTTCCCCCTTGCTC 60.506 50.000 0.00 0.00 0.00 4.26
921 2633 5.584251 GCTCTTTCCATCCAAAACAAACAAA 59.416 36.000 0.00 0.00 0.00 2.83
922 2634 6.456853 GCTCTTTCCATCCAAAACAAACAAAC 60.457 38.462 0.00 0.00 0.00 2.93
923 2635 6.467677 TCTTTCCATCCAAAACAAACAAACA 58.532 32.000 0.00 0.00 0.00 2.83
924 2636 6.936900 TCTTTCCATCCAAAACAAACAAACAA 59.063 30.769 0.00 0.00 0.00 2.83
1235 2985 3.386486 CATTGCCCCAATCAATCAATCG 58.614 45.455 0.00 0.00 31.05 3.34
1459 3213 0.108329 CCGACCGCAACCTCAAGTAT 60.108 55.000 0.00 0.00 0.00 2.12
1498 3252 0.108804 CACGGTACCTCAAGCACGAT 60.109 55.000 10.90 0.00 0.00 3.73
1574 3331 0.246635 TTCGGAGCAAGTCAGGTAGC 59.753 55.000 0.00 0.00 0.00 3.58
1575 3332 0.898326 TCGGAGCAAGTCAGGTAGCA 60.898 55.000 0.00 0.00 0.00 3.49
1576 3333 0.459237 CGGAGCAAGTCAGGTAGCAG 60.459 60.000 0.00 0.00 0.00 4.24
1577 3334 0.610687 GGAGCAAGTCAGGTAGCAGT 59.389 55.000 0.00 0.00 0.00 4.40
1578 3335 1.404851 GGAGCAAGTCAGGTAGCAGTC 60.405 57.143 0.00 0.00 0.00 3.51
1579 3336 1.548269 GAGCAAGTCAGGTAGCAGTCT 59.452 52.381 0.00 0.00 0.00 3.24
1580 3337 1.274728 AGCAAGTCAGGTAGCAGTCTG 59.725 52.381 0.00 0.00 0.00 3.51
1581 3338 1.674221 GCAAGTCAGGTAGCAGTCTGG 60.674 57.143 1.14 0.00 0.00 3.86
1582 3339 1.620819 CAAGTCAGGTAGCAGTCTGGT 59.379 52.381 9.90 9.90 0.00 4.00
1583 3340 1.551452 AGTCAGGTAGCAGTCTGGTC 58.449 55.000 8.05 0.64 0.00 4.02
1584 3341 0.171455 GTCAGGTAGCAGTCTGGTCG 59.829 60.000 8.05 0.00 0.00 4.79
1585 3342 0.037734 TCAGGTAGCAGTCTGGTCGA 59.962 55.000 8.05 0.00 0.00 4.20
1586 3343 0.453793 CAGGTAGCAGTCTGGTCGAG 59.546 60.000 8.05 0.00 0.00 4.04
1587 3344 0.038455 AGGTAGCAGTCTGGTCGAGT 59.962 55.000 8.05 0.00 0.00 4.18
1588 3345 1.281287 AGGTAGCAGTCTGGTCGAGTA 59.719 52.381 8.05 0.00 0.00 2.59
1589 3346 2.089980 GGTAGCAGTCTGGTCGAGTAA 58.910 52.381 8.05 0.00 0.00 2.24
1784 3554 1.463056 CGTTGCAAGGCGTCTCAAATA 59.537 47.619 6.16 0.00 0.00 1.40
1819 3589 4.376146 GCTTATAAGGCTCCAGAGTTGAG 58.624 47.826 14.28 0.00 0.00 3.02
1937 3707 2.480759 GCCCATGTTCACTTGATGCATC 60.481 50.000 20.14 20.14 0.00 3.91
1943 3713 3.193903 TGTTCACTTGATGCATCCCATTG 59.806 43.478 23.67 14.68 33.29 2.82
1948 3718 3.053395 ACTTGATGCATCCCATTGTAGGT 60.053 43.478 23.67 7.03 33.29 3.08
1963 3880 8.581578 CCCATTGTAGGTAATGTGTAAAACTTT 58.418 33.333 0.00 0.00 36.54 2.66
2126 4096 7.277760 GGGTAAAAATATGACCTTGAAACATGC 59.722 37.037 0.00 0.00 33.48 4.06
2133 4116 4.378774 TGACCTTGAAACATGCCAAATTG 58.621 39.130 0.00 0.00 0.00 2.32
2153 4136 1.258445 AAGGCGTCCCTCGATTCTGT 61.258 55.000 0.00 0.00 41.90 3.41
2178 4161 1.956477 GCTGGCTCTTTCTTGACCAAA 59.044 47.619 0.00 0.00 0.00 3.28
2371 4542 3.947834 CAGACAAGACAAGGAAGTGGTTT 59.052 43.478 0.00 0.00 0.00 3.27
2402 4573 6.542370 TCTTATTGGTAAAACTAGCATCTGCC 59.458 38.462 0.00 0.00 43.38 4.85
2435 4606 6.034898 CCTTGTCTTGTTTACTTTGCACTTTG 59.965 38.462 0.00 0.00 0.00 2.77
2464 4635 4.346129 GCACTTTGCACATCTATTACTGC 58.654 43.478 0.00 0.00 44.26 4.40
2486 4657 3.735208 CGCTCGACTTACTGTCAATCCAT 60.735 47.826 0.00 0.00 45.60 3.41
2490 4661 6.583050 GCTCGACTTACTGTCAATCCATATAC 59.417 42.308 0.00 0.00 45.60 1.47
2512 4690 3.060615 GGCAGCAAGCTGTGAGGG 61.061 66.667 21.75 0.00 45.24 4.30
2527 4705 5.047306 GCTGTGAGGGCCTTTTATTTTTACT 60.047 40.000 7.89 0.00 0.00 2.24
2537 4723 6.581166 GCCTTTTATTTTTACTGGTTCACTCG 59.419 38.462 0.00 0.00 0.00 4.18
2625 4815 1.000938 GTTTGCAAGCTGGTCTGGAAG 60.001 52.381 5.98 0.00 0.00 3.46
2673 4869 4.721776 ACCTTAGCTCACCCATCTCATTTA 59.278 41.667 0.00 0.00 0.00 1.40
2749 4948 3.306919 CCTTTTGGGCTATGTTTGCACAT 60.307 43.478 0.00 0.00 43.84 3.21
2756 4955 4.937015 GGGCTATGTTTGCACATCATTTTT 59.063 37.500 0.00 0.00 43.06 1.94
2769 4968 6.637658 GCACATCATTTTTCCAAACCAATTTG 59.362 34.615 0.00 0.00 44.19 2.32
2820 5019 8.470002 ACAATTTTAGCTAATGATTTGGAGACC 58.530 33.333 7.08 0.00 0.00 3.85
2961 5160 7.551617 GCTTTTAAAGTGCTCCACTAGGTTATA 59.448 37.037 6.57 0.00 44.62 0.98
2988 5187 4.660303 TGGATATTCCTGTATTGTGCCTCT 59.340 41.667 0.00 0.00 37.46 3.69
3015 5214 6.321821 AGTTTATGGCCATTAGTACCTCAA 57.678 37.500 26.37 5.53 0.00 3.02
3032 5254 5.660460 ACCTCAACCAATTGTTTTGTTCTC 58.340 37.500 13.80 0.00 37.11 2.87
3094 5326 9.793245 CTTTGAAGTATCTGTAGTTAAAACACG 57.207 33.333 0.00 0.00 0.00 4.49
3154 5386 2.704725 TGCTCCGCATTCTTTGTTTC 57.295 45.000 0.00 0.00 31.71 2.78
3183 5415 4.460034 TGTGCACATAATTCAGAACTGCAT 59.540 37.500 17.42 0.00 35.73 3.96
3216 5454 6.389091 GGTCTTGATGATGTTGTTTGCATTA 58.611 36.000 0.00 0.00 0.00 1.90
3257 5496 3.362534 CGCTGCCATTTTTAACCGTTTAC 59.637 43.478 0.00 0.00 0.00 2.01
3267 5513 5.365403 TTTAACCGTTTACCTGATTGCAG 57.635 39.130 0.00 0.00 41.93 4.41
3291 5537 2.005370 TCCTGGTCTTACAACCTCGT 57.995 50.000 0.00 0.00 40.20 4.18
3300 5546 2.373540 TACAACCTCGTACACCATGC 57.626 50.000 0.00 0.00 0.00 4.06
3360 5606 4.739793 TGGGACCTCTTCATTGACAAATT 58.260 39.130 0.00 0.00 0.00 1.82
3375 5622 6.723298 TGACAAATTCAGGTATGTTGGTTT 57.277 33.333 0.00 0.00 0.00 3.27
3377 5624 8.415950 TGACAAATTCAGGTATGTTGGTTTAT 57.584 30.769 0.00 0.00 0.00 1.40
3409 5656 1.057851 TTCCCCAACCAGGACGAACT 61.058 55.000 0.00 0.00 41.22 3.01
3448 5719 4.680708 GCAGACCTTACACTATAGCAGCAA 60.681 45.833 0.00 0.00 0.00 3.91
3523 6233 9.927081 ATTCATTATTGATGATAATACCCCCTC 57.073 33.333 0.00 0.00 44.01 4.30
3524 6234 7.872138 TCATTATTGATGATAATACCCCCTCC 58.128 38.462 0.00 0.00 39.83 4.30
3525 6235 7.463941 TCATTATTGATGATAATACCCCCTCCA 59.536 37.037 0.00 0.00 39.83 3.86
3526 6236 7.845537 TTATTGATGATAATACCCCCTCCAT 57.154 36.000 0.00 0.00 0.00 3.41
3527 6237 6.741500 ATTGATGATAATACCCCCTCCATT 57.259 37.500 0.00 0.00 0.00 3.16
3528 6238 5.779241 TGATGATAATACCCCCTCCATTC 57.221 43.478 0.00 0.00 0.00 2.67
3529 6239 5.169438 TGATGATAATACCCCCTCCATTCA 58.831 41.667 0.00 0.00 0.00 2.57
3530 6240 4.993705 TGATAATACCCCCTCCATTCAC 57.006 45.455 0.00 0.00 0.00 3.18
3531 6241 4.577096 TGATAATACCCCCTCCATTCACT 58.423 43.478 0.00 0.00 0.00 3.41
3532 6242 5.733000 TGATAATACCCCCTCCATTCACTA 58.267 41.667 0.00 0.00 0.00 2.74
3533 6243 6.339220 TGATAATACCCCCTCCATTCACTAT 58.661 40.000 0.00 0.00 0.00 2.12
3534 6244 6.797540 TGATAATACCCCCTCCATTCACTATT 59.202 38.462 0.00 0.00 0.00 1.73
3535 6245 7.964867 TGATAATACCCCCTCCATTCACTATTA 59.035 37.037 0.00 0.00 0.00 0.98
3536 6246 6.704056 AATACCCCCTCCATTCACTATTAG 57.296 41.667 0.00 0.00 0.00 1.73
3537 6247 4.295905 ACCCCCTCCATTCACTATTAGA 57.704 45.455 0.00 0.00 0.00 2.10
3538 6248 4.641868 ACCCCCTCCATTCACTATTAGAA 58.358 43.478 0.00 0.00 0.00 2.10
3539 6249 5.235534 ACCCCCTCCATTCACTATTAGAAT 58.764 41.667 0.00 0.00 36.19 2.40
3540 6250 6.399013 ACCCCCTCCATTCACTATTAGAATA 58.601 40.000 0.00 0.00 34.14 1.75
3541 6251 6.272558 ACCCCCTCCATTCACTATTAGAATAC 59.727 42.308 0.00 0.00 34.14 1.89
3542 6252 6.398918 CCCCTCCATTCACTATTAGAATACG 58.601 44.000 0.00 0.00 34.14 3.06
3543 6253 6.014499 CCCCTCCATTCACTATTAGAATACGT 60.014 42.308 0.00 0.00 34.14 3.57
3544 6254 7.442656 CCCTCCATTCACTATTAGAATACGTT 58.557 38.462 0.00 0.00 34.14 3.99
3545 6255 7.931948 CCCTCCATTCACTATTAGAATACGTTT 59.068 37.037 0.00 0.00 34.14 3.60
3546 6256 9.326413 CCTCCATTCACTATTAGAATACGTTTT 57.674 33.333 0.00 0.00 34.14 2.43
3578 6288 7.727578 TTTCTTACTGGGATGTATGTAGACA 57.272 36.000 0.00 0.00 0.00 3.41
3579 6289 7.914427 TTCTTACTGGGATGTATGTAGACAT 57.086 36.000 0.08 0.08 42.82 3.06
3580 6290 7.290110 TCTTACTGGGATGTATGTAGACATG 57.710 40.000 5.39 0.00 40.18 3.21
3581 6291 6.839134 TCTTACTGGGATGTATGTAGACATGT 59.161 38.462 0.00 0.00 40.18 3.21
3582 6292 5.957771 ACTGGGATGTATGTAGACATGTT 57.042 39.130 0.00 0.00 40.18 2.71
3583 6293 8.541899 TTACTGGGATGTATGTAGACATGTTA 57.458 34.615 0.00 0.00 40.18 2.41
3584 6294 7.618019 ACTGGGATGTATGTAGACATGTTAT 57.382 36.000 0.00 0.00 40.18 1.89
3585 6295 8.721133 ACTGGGATGTATGTAGACATGTTATA 57.279 34.615 0.00 0.00 40.18 0.98
3586 6296 8.807118 ACTGGGATGTATGTAGACATGTTATAG 58.193 37.037 0.00 0.00 40.18 1.31
3587 6297 8.721133 TGGGATGTATGTAGACATGTTATAGT 57.279 34.615 0.00 0.00 40.18 2.12
3588 6298 8.585018 TGGGATGTATGTAGACATGTTATAGTG 58.415 37.037 0.00 0.00 40.18 2.74
3589 6299 8.035394 GGGATGTATGTAGACATGTTATAGTGG 58.965 40.741 0.00 0.00 40.18 4.00
3590 6300 8.035394 GGATGTATGTAGACATGTTATAGTGGG 58.965 40.741 0.00 0.00 40.18 4.61
3591 6301 7.907841 TGTATGTAGACATGTTATAGTGGGT 57.092 36.000 0.00 0.00 37.15 4.51
3592 6302 8.313944 TGTATGTAGACATGTTATAGTGGGTT 57.686 34.615 0.00 0.00 37.15 4.11
3593 6303 8.764558 TGTATGTAGACATGTTATAGTGGGTTT 58.235 33.333 0.00 0.00 37.15 3.27
3594 6304 9.042008 GTATGTAGACATGTTATAGTGGGTTTG 57.958 37.037 0.00 0.00 37.15 2.93
3595 6305 7.011499 TGTAGACATGTTATAGTGGGTTTGT 57.989 36.000 0.00 0.00 0.00 2.83
3596 6306 7.455058 TGTAGACATGTTATAGTGGGTTTGTT 58.545 34.615 0.00 0.00 0.00 2.83
3597 6307 7.604927 TGTAGACATGTTATAGTGGGTTTGTTC 59.395 37.037 0.00 0.00 0.00 3.18
3598 6308 6.539173 AGACATGTTATAGTGGGTTTGTTCA 58.461 36.000 0.00 0.00 0.00 3.18
3599 6309 6.430000 AGACATGTTATAGTGGGTTTGTTCAC 59.570 38.462 0.00 0.00 0.00 3.18
3600 6310 6.303839 ACATGTTATAGTGGGTTTGTTCACT 58.696 36.000 0.00 0.00 45.10 3.41
3601 6311 6.430000 ACATGTTATAGTGGGTTTGTTCACTC 59.570 38.462 0.00 0.00 42.51 3.51
3602 6312 5.931294 TGTTATAGTGGGTTTGTTCACTCA 58.069 37.500 0.00 0.00 42.51 3.41
3603 6313 6.539173 TGTTATAGTGGGTTTGTTCACTCAT 58.461 36.000 0.00 0.00 42.51 2.90
3604 6314 7.001674 TGTTATAGTGGGTTTGTTCACTCATT 58.998 34.615 0.00 0.00 42.51 2.57
3605 6315 7.504238 TGTTATAGTGGGTTTGTTCACTCATTT 59.496 33.333 0.00 0.00 42.51 2.32
3606 6316 4.918810 AGTGGGTTTGTTCACTCATTTC 57.081 40.909 0.00 0.00 39.77 2.17
3607 6317 4.277476 AGTGGGTTTGTTCACTCATTTCA 58.723 39.130 0.00 0.00 39.77 2.69
3608 6318 4.709397 AGTGGGTTTGTTCACTCATTTCAA 59.291 37.500 0.00 0.00 39.77 2.69
3609 6319 5.363580 AGTGGGTTTGTTCACTCATTTCAAT 59.636 36.000 0.00 0.00 39.77 2.57
3610 6320 5.691754 GTGGGTTTGTTCACTCATTTCAATC 59.308 40.000 0.00 0.00 27.08 2.67
3611 6321 5.221422 TGGGTTTGTTCACTCATTTCAATCC 60.221 40.000 0.00 0.00 0.00 3.01
3612 6322 5.221422 GGGTTTGTTCACTCATTTCAATCCA 60.221 40.000 0.00 0.00 32.68 3.41
3613 6323 6.458210 GGTTTGTTCACTCATTTCAATCCAT 58.542 36.000 0.00 0.00 31.89 3.41
3614 6324 7.309744 GGGTTTGTTCACTCATTTCAATCCATA 60.310 37.037 0.00 0.00 32.68 2.74
3615 6325 8.253113 GGTTTGTTCACTCATTTCAATCCATAT 58.747 33.333 0.00 0.00 31.89 1.78
3616 6326 9.079833 GTTTGTTCACTCATTTCAATCCATATG 57.920 33.333 0.00 0.00 0.00 1.78
3617 6327 7.943079 TGTTCACTCATTTCAATCCATATGT 57.057 32.000 1.24 0.00 0.00 2.29
3618 6328 9.460019 TTGTTCACTCATTTCAATCCATATGTA 57.540 29.630 1.24 0.00 0.00 2.29
3619 6329 9.112725 TGTTCACTCATTTCAATCCATATGTAG 57.887 33.333 1.24 0.00 0.00 2.74
3620 6330 9.113838 GTTCACTCATTTCAATCCATATGTAGT 57.886 33.333 1.24 0.00 0.00 2.73
3621 6331 8.893219 TCACTCATTTCAATCCATATGTAGTC 57.107 34.615 1.24 0.00 0.00 2.59
3622 6332 7.933577 TCACTCATTTCAATCCATATGTAGTCC 59.066 37.037 1.24 0.00 0.00 3.85
3623 6333 7.716560 CACTCATTTCAATCCATATGTAGTCCA 59.283 37.037 1.24 0.00 0.00 4.02
3624 6334 8.443176 ACTCATTTCAATCCATATGTAGTCCAT 58.557 33.333 1.24 0.00 37.58 3.41
3625 6335 9.948964 CTCATTTCAATCCATATGTAGTCCATA 57.051 33.333 1.24 0.00 40.27 2.74
3663 6373 9.862371 ATAACATCTTATAATAGTGAGCGAAGG 57.138 33.333 0.00 0.00 0.00 3.46
3664 6374 6.692486 ACATCTTATAATAGTGAGCGAAGGG 58.308 40.000 0.00 0.00 0.00 3.95
3665 6375 6.493802 ACATCTTATAATAGTGAGCGAAGGGA 59.506 38.462 0.00 0.00 0.00 4.20
3666 6376 6.576662 TCTTATAATAGTGAGCGAAGGGAG 57.423 41.667 0.00 0.00 0.00 4.30
3667 6377 6.069331 TCTTATAATAGTGAGCGAAGGGAGT 58.931 40.000 0.00 0.00 0.00 3.85
3740 6450 8.712228 TCCATCGATATATATATTGCTGAGGT 57.288 34.615 19.16 0.00 0.00 3.85
3750 6460 9.799106 ATATATATTGCTGAGGTAATAATGGCC 57.201 33.333 0.00 0.00 34.63 5.36
3752 6462 3.882102 TGCTGAGGTAATAATGGCCAT 57.118 42.857 14.09 14.09 0.00 4.40
3753 6463 3.754965 TGCTGAGGTAATAATGGCCATC 58.245 45.455 21.08 5.66 0.00 3.51
3755 6465 3.503748 GCTGAGGTAATAATGGCCATCAC 59.496 47.826 21.08 14.16 0.00 3.06
3757 6467 5.513094 GCTGAGGTAATAATGGCCATCACTA 60.513 44.000 21.08 8.55 0.00 2.74
3758 6468 6.508030 TGAGGTAATAATGGCCATCACTAA 57.492 37.500 21.08 2.82 0.00 2.24
3759 6469 6.905736 TGAGGTAATAATGGCCATCACTAAA 58.094 36.000 21.08 0.00 0.00 1.85
3760 6470 7.526041 TGAGGTAATAATGGCCATCACTAAAT 58.474 34.615 21.08 3.53 0.00 1.40
3761 6471 8.004215 TGAGGTAATAATGGCCATCACTAAATT 58.996 33.333 21.08 13.62 0.00 1.82
3762 6472 9.515226 GAGGTAATAATGGCCATCACTAAATTA 57.485 33.333 21.08 12.71 0.00 1.40
3763 6473 9.875708 AGGTAATAATGGCCATCACTAAATTAA 57.124 29.630 21.08 0.00 0.00 1.40
3771 6805 5.245301 GGCCATCACTAAATTAAATACCCCC 59.755 44.000 0.00 0.00 0.00 5.40
3773 6807 6.553476 GCCATCACTAAATTAAATACCCCCTT 59.447 38.462 0.00 0.00 0.00 3.95
3774 6808 7.255836 GCCATCACTAAATTAAATACCCCCTTC 60.256 40.741 0.00 0.00 0.00 3.46
3776 6810 5.824097 TCACTAAATTAAATACCCCCTTCGC 59.176 40.000 0.00 0.00 0.00 4.70
3778 6812 6.017357 CACTAAATTAAATACCCCCTTCGCTC 60.017 42.308 0.00 0.00 0.00 5.03
3779 6813 4.513406 AATTAAATACCCCCTTCGCTCA 57.487 40.909 0.00 0.00 0.00 4.26
3781 6815 1.286248 AAATACCCCCTTCGCTCACT 58.714 50.000 0.00 0.00 0.00 3.41
3782 6816 1.286248 AATACCCCCTTCGCTCACTT 58.714 50.000 0.00 0.00 0.00 3.16
3784 6818 1.188863 TACCCCCTTCGCTCACTTAC 58.811 55.000 0.00 0.00 0.00 2.34
3789 6823 3.228453 CCCCTTCGCTCACTTACCTATA 58.772 50.000 0.00 0.00 0.00 1.31
3793 6827 5.927115 CCCTTCGCTCACTTACCTATAATTC 59.073 44.000 0.00 0.00 0.00 2.17
3821 6856 8.814038 AATAATGGCCATCTTATAACAGATCC 57.186 34.615 21.08 0.00 30.50 3.36
3822 6857 5.848286 ATGGCCATCTTATAACAGATCCA 57.152 39.130 14.09 0.00 33.71 3.41
3823 6858 5.645056 TGGCCATCTTATAACAGATCCAA 57.355 39.130 0.00 0.00 30.50 3.53
3824 6859 5.376625 TGGCCATCTTATAACAGATCCAAC 58.623 41.667 0.00 0.00 30.50 3.77
3857 6899 7.924412 TCTTAATAACACTTACCATAAGGCTCG 59.076 37.037 0.00 0.00 39.06 5.03
3861 6903 3.765511 ACACTTACCATAAGGCTCGTGTA 59.234 43.478 4.58 0.00 38.79 2.90
3862 6904 4.221262 ACACTTACCATAAGGCTCGTGTAA 59.779 41.667 4.58 0.00 38.79 2.41
3863 6905 5.105064 ACACTTACCATAAGGCTCGTGTAAT 60.105 40.000 4.58 0.00 38.79 1.89
3935 6987 1.970114 CTGTTGCAGGTGCTCCAGG 60.970 63.158 7.70 0.00 42.66 4.45
3938 6990 1.109323 GTTGCAGGTGCTCCAGGTTT 61.109 55.000 7.70 0.00 42.66 3.27
3951 7003 2.027192 TCCAGGTTTGCAGACTATGTCC 60.027 50.000 7.38 0.00 32.18 4.02
3988 7043 6.269077 TCCTGCTAAAATATCCGGTATCTCAA 59.731 38.462 0.00 0.00 0.00 3.02
4009 7064 5.183522 TCAACTGTGAGAATTGCATGCAATA 59.816 36.000 38.60 24.32 44.86 1.90
4041 7096 4.718940 ACTTTGTCAAACTTCCACCTTG 57.281 40.909 0.00 0.00 0.00 3.61
4047 7102 5.258051 TGTCAAACTTCCACCTTGTTAGTT 58.742 37.500 0.00 0.00 0.00 2.24
4052 7107 6.796705 AACTTCCACCTTGTTAGTTAATCG 57.203 37.500 0.00 0.00 0.00 3.34
4053 7108 4.694037 ACTTCCACCTTGTTAGTTAATCGC 59.306 41.667 0.00 0.00 0.00 4.58
4054 7109 4.546829 TCCACCTTGTTAGTTAATCGCT 57.453 40.909 0.00 0.00 0.00 4.93
4055 7110 5.664294 TCCACCTTGTTAGTTAATCGCTA 57.336 39.130 0.00 0.00 0.00 4.26
4161 7220 6.634805 TGCAGTTGTTCTTATGTTCCAAAAA 58.365 32.000 0.00 0.00 0.00 1.94
4162 7221 7.271511 TGCAGTTGTTCTTATGTTCCAAAAAT 58.728 30.769 0.00 0.00 0.00 1.82
4176 7235 8.655651 TGTTCCAAAAATCTGTTAACCAATTC 57.344 30.769 2.48 0.00 0.00 2.17
4202 7261 6.924060 CAGTCTATAACCTATGTGCCTGTAAC 59.076 42.308 0.00 0.00 0.00 2.50
4208 7267 2.951642 CCTATGTGCCTGTAACCATTGG 59.048 50.000 0.00 0.00 0.00 3.16
4214 7273 1.134946 GCCTGTAACCATTGGCATGTC 59.865 52.381 1.54 0.00 44.34 3.06
4229 7288 5.247862 TGGCATGTCTTCATTATATCGCAT 58.752 37.500 0.00 0.00 31.15 4.73
4230 7289 5.706833 TGGCATGTCTTCATTATATCGCATT 59.293 36.000 0.00 0.00 31.15 3.56
4305 7364 4.244066 TGTTTGGTTCATATGCACATTGC 58.756 39.130 7.79 0.00 45.29 3.56
4312 7371 0.397394 ATATGCACATTGCCTGCCCA 60.397 50.000 0.00 0.00 44.23 5.36
4328 7387 5.116882 CCTGCCCATAGTTACAGAAGTTAC 58.883 45.833 0.00 0.00 31.67 2.50
4394 7458 9.070179 AGCTTTTCATTGCCAATCTTTTATTTT 57.930 25.926 0.00 0.00 0.00 1.82
4432 7496 3.550820 ACCTGTCTTATGCAACAACACA 58.449 40.909 0.00 0.00 0.00 3.72
4447 7511 5.456548 ACAACACAATCATGCTTTGATGA 57.543 34.783 13.21 0.00 44.51 2.92
4469 7533 7.843490 TGATGTTCATTACACTACCTTAAGC 57.157 36.000 0.00 0.00 40.19 3.09
4495 7559 5.822519 CCTGTACCTGCTGCATTTCTAATTA 59.177 40.000 1.31 0.00 0.00 1.40
4496 7560 6.017605 CCTGTACCTGCTGCATTTCTAATTAG 60.018 42.308 1.31 6.11 0.00 1.73
4601 7670 5.469760 GGCAGTGAAAAATGCAGGTAAATTT 59.530 36.000 0.00 0.00 44.37 1.82
4680 7751 6.055588 ACCTAATATTGTTAGTTGCGAGCAT 58.944 36.000 0.00 0.00 0.00 3.79
4874 8023 9.209175 GACATTGTTTTGTCTATCAAGTACTCT 57.791 33.333 0.00 0.00 42.22 3.24
4881 8030 7.618502 TTGTCTATCAAGTACTCTCTCTGTC 57.381 40.000 0.00 0.00 0.00 3.51
4882 8031 6.116806 TGTCTATCAAGTACTCTCTCTGTCC 58.883 44.000 0.00 0.00 0.00 4.02
4883 8032 5.529800 GTCTATCAAGTACTCTCTCTGTCCC 59.470 48.000 0.00 0.00 0.00 4.46
4884 8033 3.088789 TCAAGTACTCTCTCTGTCCCC 57.911 52.381 0.00 0.00 0.00 4.81
4885 8034 2.378886 TCAAGTACTCTCTCTGTCCCCA 59.621 50.000 0.00 0.00 0.00 4.96
4886 8035 3.011821 TCAAGTACTCTCTCTGTCCCCAT 59.988 47.826 0.00 0.00 0.00 4.00
4887 8036 4.229812 TCAAGTACTCTCTCTGTCCCCATA 59.770 45.833 0.00 0.00 0.00 2.74
4888 8037 4.883021 AGTACTCTCTCTGTCCCCATAA 57.117 45.455 0.00 0.00 0.00 1.90
4889 8038 5.411103 AGTACTCTCTCTGTCCCCATAAT 57.589 43.478 0.00 0.00 0.00 1.28
4890 8039 6.532119 AGTACTCTCTCTGTCCCCATAATA 57.468 41.667 0.00 0.00 0.00 0.98
4891 8040 7.109901 AGTACTCTCTCTGTCCCCATAATAT 57.890 40.000 0.00 0.00 0.00 1.28
4892 8041 8.233349 AGTACTCTCTCTGTCCCCATAATATA 57.767 38.462 0.00 0.00 0.00 0.86
4893 8042 8.679725 AGTACTCTCTCTGTCCCCATAATATAA 58.320 37.037 0.00 0.00 0.00 0.98
4894 8043 8.962679 GTACTCTCTCTGTCCCCATAATATAAG 58.037 40.741 0.00 0.00 0.00 1.73
4895 8044 7.770662 ACTCTCTCTGTCCCCATAATATAAGA 58.229 38.462 0.00 0.00 0.00 2.10
4896 8045 7.893302 ACTCTCTCTGTCCCCATAATATAAGAG 59.107 40.741 0.00 0.00 32.92 2.85
4897 8046 6.665680 TCTCTCTGTCCCCATAATATAAGAGC 59.334 42.308 0.00 0.00 31.94 4.09
4898 8047 5.419155 TCTCTGTCCCCATAATATAAGAGCG 59.581 44.000 0.00 0.00 31.94 5.03
4899 8048 5.084519 TCTGTCCCCATAATATAAGAGCGT 58.915 41.667 0.00 0.00 0.00 5.07
4900 8049 5.542635 TCTGTCCCCATAATATAAGAGCGTT 59.457 40.000 0.00 0.00 0.00 4.84
4901 8050 6.042781 TCTGTCCCCATAATATAAGAGCGTTT 59.957 38.462 0.00 0.00 0.00 3.60
4902 8051 6.597562 TGTCCCCATAATATAAGAGCGTTTT 58.402 36.000 0.00 0.00 0.00 2.43
4903 8052 6.708949 TGTCCCCATAATATAAGAGCGTTTTC 59.291 38.462 0.00 0.00 0.00 2.29
4946 8095 8.446599 AAAAACACTCTTATATTATGGGACGG 57.553 34.615 0.00 0.00 0.00 4.79
4947 8096 6.989155 AACACTCTTATATTATGGGACGGA 57.011 37.500 0.00 0.00 0.00 4.69
4948 8097 6.591750 ACACTCTTATATTATGGGACGGAG 57.408 41.667 0.00 0.00 0.00 4.63
4949 8098 5.480772 ACACTCTTATATTATGGGACGGAGG 59.519 44.000 0.00 0.00 0.00 4.30
4950 8099 5.024118 ACTCTTATATTATGGGACGGAGGG 58.976 45.833 0.00 0.00 0.00 4.30
4951 8100 5.222484 ACTCTTATATTATGGGACGGAGGGA 60.222 44.000 0.00 0.00 0.00 4.20
4952 8101 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
4962 8111 2.885894 GGACGGAGGGAGTATCTGTTAG 59.114 54.545 0.00 0.00 36.41 2.34
4970 8119 5.491982 AGGGAGTATCTGTTAGCTGTTTTG 58.508 41.667 0.00 0.00 33.73 2.44
4985 8134 5.879777 AGCTGTTTTGGTTGTTTTGCTTATT 59.120 32.000 0.00 0.00 0.00 1.40
4988 8137 7.540400 GCTGTTTTGGTTGTTTTGCTTATTTTT 59.460 29.630 0.00 0.00 0.00 1.94
5033 8182 3.385755 CAGGGCTAAATTTGGATTGGAGG 59.614 47.826 5.63 0.00 0.00 4.30
5042 8191 3.774842 TTGGATTGGAGGGGCTAATTT 57.225 42.857 0.00 0.00 0.00 1.82
5045 8194 4.030216 TGGATTGGAGGGGCTAATTTTTC 58.970 43.478 0.00 0.00 0.00 2.29
5081 8230 5.213913 CTGCATAACAGTACTTGAAGCAG 57.786 43.478 15.38 15.38 41.86 4.24
5093 8242 8.128582 CAGTACTTGAAGCAGTCATTTTTAACA 58.871 33.333 0.00 0.00 35.70 2.41
5151 8300 9.877178 AAACGTTTATCATCAGAAGAGAGTAAT 57.123 29.630 12.83 0.00 0.00 1.89
5205 8354 3.864789 AGCTTCTTTCTTCACCTTGGA 57.135 42.857 0.00 0.00 0.00 3.53
5220 8399 5.534654 TCACCTTGGATCCTTGTAAAAGTTG 59.465 40.000 14.23 5.92 0.00 3.16
5223 8402 5.335976 CCTTGGATCCTTGTAAAAGTTGAGC 60.336 44.000 14.23 0.00 0.00 4.26
5238 8417 2.754552 GTTGAGCCAAGGCATGTTATGA 59.245 45.455 14.40 0.00 44.88 2.15
5256 8435 8.991243 TGTTATGACATGGTGTTAGTTACTAC 57.009 34.615 0.00 0.00 0.00 2.73
5257 8436 8.809066 TGTTATGACATGGTGTTAGTTACTACT 58.191 33.333 0.00 0.00 38.44 2.57
5258 8437 9.298774 GTTATGACATGGTGTTAGTTACTACTC 57.701 37.037 0.00 0.00 35.78 2.59
5259 8438 6.276832 TGACATGGTGTTAGTTACTACTCC 57.723 41.667 0.00 0.00 35.78 3.85
5260 8439 5.186409 TGACATGGTGTTAGTTACTACTCCC 59.814 44.000 0.00 0.00 35.78 4.30
5261 8440 5.339477 ACATGGTGTTAGTTACTACTCCCT 58.661 41.667 0.00 0.00 35.78 4.20
5262 8441 5.421374 ACATGGTGTTAGTTACTACTCCCTC 59.579 44.000 0.00 0.00 35.78 4.30
5263 8442 4.347607 TGGTGTTAGTTACTACTCCCTCC 58.652 47.826 0.00 0.00 35.78 4.30
5264 8443 3.379688 GGTGTTAGTTACTACTCCCTCCG 59.620 52.174 0.00 0.00 35.78 4.63
5265 8444 4.013050 GTGTTAGTTACTACTCCCTCCGT 58.987 47.826 0.00 0.00 35.78 4.69
5266 8445 4.095632 GTGTTAGTTACTACTCCCTCCGTC 59.904 50.000 0.00 0.00 35.78 4.79
5267 8446 2.433662 AGTTACTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
5268 8447 1.064091 AGTTACTACTCCCTCCGTCCC 60.064 57.143 0.00 0.00 0.00 4.46
5269 8448 1.002069 TTACTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
5270 8449 1.229131 TACTACTCCCTCCGTCCCAT 58.771 55.000 0.00 0.00 0.00 4.00
5271 8450 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
5272 8451 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
5273 8452 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
5274 8453 3.400322 ACTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
5275 8454 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
5276 8455 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
5277 8456 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
5278 8457 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
5279 8458 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
5280 8459 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
5281 8460 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
5282 8461 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
5283 8462 4.813027 TCCGTCCCATAATATAAGAACGC 58.187 43.478 0.00 0.00 0.00 4.84
5284 8463 4.525487 TCCGTCCCATAATATAAGAACGCT 59.475 41.667 0.00 0.00 0.00 5.07
5285 8464 5.011329 TCCGTCCCATAATATAAGAACGCTT 59.989 40.000 0.00 0.00 38.15 4.68
5286 8465 5.699458 CCGTCCCATAATATAAGAACGCTTT 59.301 40.000 0.00 0.00 35.56 3.51
5287 8466 6.204108 CCGTCCCATAATATAAGAACGCTTTT 59.796 38.462 0.00 0.00 35.56 2.27
5288 8467 7.069569 CGTCCCATAATATAAGAACGCTTTTG 58.930 38.462 0.00 0.00 35.56 2.44
5289 8468 7.042321 CGTCCCATAATATAAGAACGCTTTTGA 60.042 37.037 0.00 0.00 35.56 2.69
5290 8469 8.068380 GTCCCATAATATAAGAACGCTTTTGAC 58.932 37.037 0.00 0.00 35.56 3.18
5291 8470 7.771361 TCCCATAATATAAGAACGCTTTTGACA 59.229 33.333 0.00 0.00 35.56 3.58
5292 8471 7.855904 CCCATAATATAAGAACGCTTTTGACAC 59.144 37.037 0.00 0.00 35.56 3.67
5293 8472 8.612619 CCATAATATAAGAACGCTTTTGACACT 58.387 33.333 0.00 0.00 35.56 3.55
5296 8475 8.773404 AATATAAGAACGCTTTTGACACTAGT 57.227 30.769 0.00 0.00 35.56 2.57
5297 8476 9.865321 AATATAAGAACGCTTTTGACACTAGTA 57.135 29.630 0.00 0.00 35.56 1.82
5300 8479 7.813852 AAGAACGCTTTTGACACTAGTATAG 57.186 36.000 0.00 0.00 46.50 1.31
5301 8480 8.517878 TAAGAACGCTTTTGACACTAGTATAGT 58.482 33.333 0.00 0.00 43.41 2.12
5331 8510 7.989416 AAACGTTCTTATATTTTGGGACAGA 57.011 32.000 0.00 0.00 42.39 3.41
5332 8511 7.611213 AACGTTCTTATATTTTGGGACAGAG 57.389 36.000 0.00 0.00 42.39 3.35
5333 8512 6.113411 ACGTTCTTATATTTTGGGACAGAGG 58.887 40.000 0.00 0.00 42.39 3.69
5334 8513 5.527582 CGTTCTTATATTTTGGGACAGAGGG 59.472 44.000 0.00 0.00 42.39 4.30
5335 8514 6.631766 CGTTCTTATATTTTGGGACAGAGGGA 60.632 42.308 0.00 0.00 42.39 4.20
5336 8515 6.500589 TCTTATATTTTGGGACAGAGGGAG 57.499 41.667 0.00 0.00 42.39 4.30
5337 8516 5.970640 TCTTATATTTTGGGACAGAGGGAGT 59.029 40.000 0.00 0.00 42.39 3.85
5338 8517 7.136885 TCTTATATTTTGGGACAGAGGGAGTA 58.863 38.462 0.00 0.00 42.39 2.59
5345 8524 4.695606 TGGGACAGAGGGAGTACTTAATT 58.304 43.478 0.00 0.00 0.00 1.40
5452 8631 5.066505 TCAAAGGACAGAAGAAGCAACTTTC 59.933 40.000 0.00 0.00 0.00 2.62
5466 8645 1.048601 ACTTTCGAGCAAGGTCCTCA 58.951 50.000 0.00 0.00 0.00 3.86
5486 8665 2.500509 TCCAAAAATGCAACGGACAC 57.499 45.000 0.00 0.00 0.00 3.67
5545 8724 6.650427 AACCAGGTTTCATTTCCTTACTTC 57.350 37.500 0.00 0.00 30.91 3.01
5546 8725 4.760204 ACCAGGTTTCATTTCCTTACTTCG 59.240 41.667 0.00 0.00 30.91 3.79
5547 8726 4.760204 CCAGGTTTCATTTCCTTACTTCGT 59.240 41.667 0.00 0.00 30.91 3.85
5548 8727 5.935789 CCAGGTTTCATTTCCTTACTTCGTA 59.064 40.000 0.00 0.00 30.91 3.43
5549 8728 6.598064 CCAGGTTTCATTTCCTTACTTCGTAT 59.402 38.462 0.00 0.00 30.91 3.06
5550 8729 7.201617 CCAGGTTTCATTTCCTTACTTCGTATC 60.202 40.741 0.00 0.00 30.91 2.24
5551 8730 7.333423 CAGGTTTCATTTCCTTACTTCGTATCA 59.667 37.037 0.00 0.00 30.91 2.15
5552 8731 7.881232 AGGTTTCATTTCCTTACTTCGTATCAA 59.119 33.333 0.00 0.00 0.00 2.57
5553 8732 7.961283 GGTTTCATTTCCTTACTTCGTATCAAC 59.039 37.037 0.00 0.00 0.00 3.18
5574 8753 2.533266 CTGATATAACAGCCCGCAGT 57.467 50.000 0.00 0.00 0.00 4.40
5575 8754 2.138320 CTGATATAACAGCCCGCAGTG 58.862 52.381 0.00 0.00 0.00 3.66
5576 8755 1.202639 TGATATAACAGCCCGCAGTGG 60.203 52.381 0.00 0.00 37.55 4.00
5577 8756 1.070134 GATATAACAGCCCGCAGTGGA 59.930 52.381 0.00 0.00 42.00 4.02
5578 8757 1.128200 TATAACAGCCCGCAGTGGAT 58.872 50.000 0.00 0.00 42.00 3.41
5579 8758 0.179045 ATAACAGCCCGCAGTGGATC 60.179 55.000 0.00 0.00 42.00 3.36
5580 8759 1.549243 TAACAGCCCGCAGTGGATCA 61.549 55.000 0.00 0.00 42.00 2.92
5581 8760 2.191375 CAGCCCGCAGTGGATCAT 59.809 61.111 0.00 0.00 42.00 2.45
5582 8761 1.452651 CAGCCCGCAGTGGATCATT 60.453 57.895 0.00 0.00 42.00 2.57
5583 8762 1.452651 AGCCCGCAGTGGATCATTG 60.453 57.895 0.00 0.00 42.00 2.82
5584 8763 3.113745 CCCGCAGTGGATCATTGC 58.886 61.111 0.00 5.49 42.35 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.672961 CCTAATGAAGGTGACTCGCA 57.327 50.000 0.00 0.00 42.68 5.10
48 49 2.748388 ACCACTTACTCGGAGCCTAAT 58.252 47.619 4.58 0.00 0.00 1.73
76 77 0.704076 CCAAGAATCCCCCTCACCAA 59.296 55.000 0.00 0.00 0.00 3.67
77 78 1.863155 GCCAAGAATCCCCCTCACCA 61.863 60.000 0.00 0.00 0.00 4.17
101 102 1.216710 CCGTCTCTGAGCTTCACCC 59.783 63.158 0.00 0.00 0.00 4.61
149 150 9.233649 CTATATAGAAAAGACCCTAGACACGAT 57.766 37.037 3.44 0.00 0.00 3.73
183 184 7.516198 AAGAAATGCAGAAATACAACTCAGT 57.484 32.000 0.00 0.00 0.00 3.41
184 185 7.327761 CCAAAGAAATGCAGAAATACAACTCAG 59.672 37.037 0.00 0.00 0.00 3.35
220 221 8.352137 TCATCAAACATTTGGATTACATCTGT 57.648 30.769 4.58 0.00 38.66 3.41
229 230 4.529377 ACCAGCTTCATCAAACATTTGGAT 59.471 37.500 4.58 0.00 38.66 3.41
402 404 3.502191 TGTCCGCCAAAATATGCTTTC 57.498 42.857 0.00 0.00 0.00 2.62
431 433 4.649674 TGGATTAAGTCAGGCTCGAGTAAT 59.350 41.667 15.13 8.01 0.00 1.89
482 484 2.813474 GCGGACGTGTAGCATGCA 60.813 61.111 21.98 2.77 0.00 3.96
485 487 4.508128 CCGGCGGACGTGTAGCAT 62.508 66.667 24.41 0.00 42.24 3.79
495 497 0.250793 TAAAAAGATCAGCCGGCGGA 59.749 50.000 31.28 31.28 0.00 5.54
536 539 1.933181 CTGATGCGCCAAATCTAACGA 59.067 47.619 4.18 0.00 0.00 3.85
561 564 5.057843 AGACCTATGTTGCAATGATGGAT 57.942 39.130 0.59 0.00 0.00 3.41
595 598 4.582701 ACAAGATCACCATTGCGAAAAA 57.417 36.364 0.00 0.00 0.00 1.94
599 602 1.199789 GCAACAAGATCACCATTGCGA 59.800 47.619 7.84 0.00 36.63 5.10
600 603 1.068402 TGCAACAAGATCACCATTGCG 60.068 47.619 15.03 0.92 46.81 4.85
624 628 2.230992 TGCTGGCGATTTATTTTGCAGT 59.769 40.909 0.00 0.00 0.00 4.40
625 629 2.855963 CTGCTGGCGATTTATTTTGCAG 59.144 45.455 0.00 0.00 40.17 4.41
662 1561 1.002011 GCCCCTCTGTCTTTCCCAC 60.002 63.158 0.00 0.00 0.00 4.61
783 2479 3.185203 TGCCCAAACCCCTCTGCT 61.185 61.111 0.00 0.00 0.00 4.24
852 2558 1.923395 CCTCACCACCTAGCCCCAA 60.923 63.158 0.00 0.00 0.00 4.12
857 2563 4.840005 GCGGCCTCACCACCTAGC 62.840 72.222 0.00 0.00 39.03 3.42
895 2606 5.115480 GTTTGTTTTGGATGGAAAGAGCAA 58.885 37.500 0.00 0.00 0.00 3.91
897 2608 4.692228 TGTTTGTTTTGGATGGAAAGAGC 58.308 39.130 0.00 0.00 0.00 4.09
900 2611 6.734104 TGTTTGTTTGTTTTGGATGGAAAG 57.266 33.333 0.00 0.00 0.00 2.62
921 2633 2.072298 GAGCGAGCAGACAGAATTTGT 58.928 47.619 0.00 0.00 44.55 2.83
922 2634 1.396301 GGAGCGAGCAGACAGAATTTG 59.604 52.381 0.00 0.00 0.00 2.32
923 2635 1.677217 GGGAGCGAGCAGACAGAATTT 60.677 52.381 0.00 0.00 0.00 1.82
924 2636 0.107945 GGGAGCGAGCAGACAGAATT 60.108 55.000 0.00 0.00 0.00 2.17
1222 2968 2.601504 CCTGCGAGCGATTGATTGATTG 60.602 50.000 0.00 0.00 0.00 2.67
1459 3213 4.378563 CGTGTGTTGTACTTGTGGTTGAAA 60.379 41.667 0.00 0.00 0.00 2.69
1574 3331 3.426426 GCTAGTGTTACTCGACCAGACTG 60.426 52.174 0.00 0.00 0.00 3.51
1575 3332 2.748532 GCTAGTGTTACTCGACCAGACT 59.251 50.000 0.00 0.00 0.00 3.24
1576 3333 2.748532 AGCTAGTGTTACTCGACCAGAC 59.251 50.000 0.00 0.00 0.00 3.51
1577 3334 3.069079 AGCTAGTGTTACTCGACCAGA 57.931 47.619 0.00 0.00 0.00 3.86
1578 3335 4.034279 GTCTAGCTAGTGTTACTCGACCAG 59.966 50.000 20.10 0.00 0.00 4.00
1579 3336 3.937706 GTCTAGCTAGTGTTACTCGACCA 59.062 47.826 20.10 0.00 0.00 4.02
1580 3337 3.001127 CGTCTAGCTAGTGTTACTCGACC 59.999 52.174 20.10 0.00 0.00 4.79
1581 3338 3.862267 TCGTCTAGCTAGTGTTACTCGAC 59.138 47.826 20.10 7.21 0.00 4.20
1582 3339 4.115401 TCGTCTAGCTAGTGTTACTCGA 57.885 45.455 20.10 15.00 0.00 4.04
1583 3340 4.507021 TGATCGTCTAGCTAGTGTTACTCG 59.493 45.833 20.10 13.33 0.00 4.18
1584 3341 5.293814 TGTGATCGTCTAGCTAGTGTTACTC 59.706 44.000 20.10 10.99 0.00 2.59
1585 3342 5.183969 TGTGATCGTCTAGCTAGTGTTACT 58.816 41.667 20.10 2.30 0.00 2.24
1586 3343 5.481200 TGTGATCGTCTAGCTAGTGTTAC 57.519 43.478 20.10 10.08 0.00 2.50
1587 3344 6.056236 AGATGTGATCGTCTAGCTAGTGTTA 58.944 40.000 20.10 5.60 38.06 2.41
1588 3345 4.884744 AGATGTGATCGTCTAGCTAGTGTT 59.115 41.667 20.10 9.35 38.06 3.32
1589 3346 4.456535 AGATGTGATCGTCTAGCTAGTGT 58.543 43.478 20.10 5.30 38.06 3.55
1893 3663 5.681437 GCGACCAAACTGATAGAGTATGGAA 60.681 44.000 0.00 0.00 33.09 3.53
1937 3707 7.696992 AGTTTTACACATTACCTACAATGGG 57.303 36.000 0.00 0.00 43.61 4.00
1943 3713 7.645402 ACAGCAAAGTTTTACACATTACCTAC 58.355 34.615 0.00 0.00 0.00 3.18
1948 3718 6.606234 TCGACAGCAAAGTTTTACACATTA 57.394 33.333 0.00 0.00 0.00 1.90
1963 3880 3.987868 GAGTTACAGTGAAATCGACAGCA 59.012 43.478 0.00 0.00 0.00 4.41
2126 4096 0.811281 GAGGGACGCCTTCAATTTGG 59.189 55.000 0.00 0.00 29.47 3.28
2133 4116 0.528684 CAGAATCGAGGGACGCCTTC 60.529 60.000 0.00 0.00 42.26 3.46
2153 4136 2.880890 GTCAAGAAAGAGCCAGCAAGAA 59.119 45.455 0.00 0.00 0.00 2.52
2227 4219 6.033966 GGCATTGTACCACTATTTAACTTGC 58.966 40.000 0.00 0.00 0.00 4.01
2396 4567 0.773644 ACAAGGACACAAGGGCAGAT 59.226 50.000 0.00 0.00 0.00 2.90
2402 4573 4.881850 AGTAAACAAGACAAGGACACAAGG 59.118 41.667 0.00 0.00 0.00 3.61
2460 4631 0.109689 GACAGTAAGTCGAGCGCAGT 60.110 55.000 11.47 0.00 37.53 4.40
2486 4657 3.129113 CACAGCTTGCTGCCAAATGTATA 59.871 43.478 20.92 0.00 44.23 1.47
2490 4661 0.315886 TCACAGCTTGCTGCCAAATG 59.684 50.000 20.92 12.07 44.23 2.32
2512 4690 6.581166 CGAGTGAACCAGTAAAAATAAAAGGC 59.419 38.462 0.00 0.00 0.00 4.35
2527 4705 3.759618 AGGTTTTTCAAACGAGTGAACCA 59.240 39.130 12.03 0.26 37.24 3.67
2537 4723 6.515832 ACATGATCCAAGAGGTTTTTCAAAC 58.484 36.000 0.00 0.00 35.89 2.93
2625 4815 3.507622 CCTTCCTTCCCACTTGATTGAAC 59.492 47.826 0.00 0.00 0.00 3.18
2673 4869 8.390921 CCCCATATAATAAGTAGGGACAACAAT 58.609 37.037 0.00 0.00 38.60 2.71
2714 4912 9.883142 CATAGCCCAAAAGGATTAACAAATTAA 57.117 29.630 0.00 0.00 38.24 1.40
2749 4948 5.236047 CGCTCAAATTGGTTTGGAAAAATGA 59.764 36.000 0.00 0.00 43.85 2.57
2756 4955 1.611491 GACCGCTCAAATTGGTTTGGA 59.389 47.619 0.00 0.00 43.85 3.53
2769 4968 0.608640 TGAAAGAGAAGGGACCGCTC 59.391 55.000 6.26 6.26 0.00 5.03
2776 4975 8.667076 AAAATTGTGAAATTGAAAGAGAAGGG 57.333 30.769 0.00 0.00 0.00 3.95
2806 5005 2.421529 GGGCTACGGTCTCCAAATCATT 60.422 50.000 0.00 0.00 0.00 2.57
2820 5019 2.864343 GCACATAACTAACAGGGCTACG 59.136 50.000 0.00 0.00 0.00 3.51
2862 5061 2.287009 GCAAGAACAAAGACCTGGTTCG 60.287 50.000 0.00 0.00 44.20 3.95
2961 5160 5.594317 GGCACAATACAGGAATATCCAAAGT 59.406 40.000 0.00 0.00 39.61 2.66
2988 5187 7.785985 TGAGGTACTAATGGCCATAAACTAGTA 59.214 37.037 22.79 22.79 41.55 1.82
3015 5214 5.021033 TGCATGAGAACAAAACAATTGGT 57.979 34.783 10.83 0.00 0.00 3.67
3032 5254 7.867403 ACAAGTAAAGAGTTGGTAATTTGCATG 59.133 33.333 0.00 0.00 39.90 4.06
3094 5326 8.424274 ACAGATTTGAAAAATCAAAGGACAAC 57.576 30.769 13.58 0.00 42.03 3.32
3154 5386 7.272731 CAGTTCTGAATTATGTGCACATCAAAG 59.727 37.037 34.54 23.37 37.76 2.77
3183 5415 3.511540 ACATCATCAAGACCGACAGAGAA 59.488 43.478 0.00 0.00 0.00 2.87
3216 5454 1.809271 CGAGCAGCCAAGCACTGATAT 60.809 52.381 0.00 0.00 37.32 1.63
3267 5513 2.105993 AGGTTGTAAGACCAGGAACACC 59.894 50.000 0.00 0.00 42.35 4.16
3280 5526 2.613474 GGCATGGTGTACGAGGTTGTAA 60.613 50.000 0.00 0.00 0.00 2.41
3285 5531 1.537814 TTCGGCATGGTGTACGAGGT 61.538 55.000 0.00 0.00 36.65 3.85
3291 5537 1.067974 CGAGGTATTCGGCATGGTGTA 59.932 52.381 0.00 0.00 45.54 2.90
3375 5622 2.922955 TGGGGAATGAACAAGGGTGATA 59.077 45.455 0.00 0.00 0.00 2.15
3377 5624 1.153539 TGGGGAATGAACAAGGGTGA 58.846 50.000 0.00 0.00 0.00 4.02
3409 5656 0.178767 CTGCACCCGAGATGATGGAA 59.821 55.000 0.00 0.00 0.00 3.53
3448 5719 6.151144 GGTGATTTCTAACAGCAAACATACCT 59.849 38.462 0.00 0.00 35.10 3.08
3516 6226 4.295905 TCTAATAGTGAATGGAGGGGGT 57.704 45.455 0.00 0.00 0.00 4.95
3517 6227 5.850046 ATTCTAATAGTGAATGGAGGGGG 57.150 43.478 0.00 0.00 33.44 5.40
3518 6228 6.014499 ACGTATTCTAATAGTGAATGGAGGGG 60.014 42.308 0.00 0.00 35.90 4.79
3519 6229 6.994221 ACGTATTCTAATAGTGAATGGAGGG 58.006 40.000 0.00 0.00 35.90 4.30
3520 6230 8.888579 AAACGTATTCTAATAGTGAATGGAGG 57.111 34.615 0.00 0.00 35.90 4.30
3552 6262 8.598916 TGTCTACATACATCCCAGTAAGAAAAA 58.401 33.333 0.00 0.00 0.00 1.94
3553 6263 8.141298 TGTCTACATACATCCCAGTAAGAAAA 57.859 34.615 0.00 0.00 0.00 2.29
3554 6264 7.727578 TGTCTACATACATCCCAGTAAGAAA 57.272 36.000 0.00 0.00 0.00 2.52
3555 6265 7.344612 ACATGTCTACATACATCCCAGTAAGAA 59.655 37.037 0.00 0.00 38.01 2.52
3556 6266 6.839134 ACATGTCTACATACATCCCAGTAAGA 59.161 38.462 0.00 0.00 38.01 2.10
3557 6267 7.055667 ACATGTCTACATACATCCCAGTAAG 57.944 40.000 0.00 0.00 38.01 2.34
3558 6268 7.432148 AACATGTCTACATACATCCCAGTAA 57.568 36.000 0.00 0.00 38.01 2.24
3559 6269 8.721133 ATAACATGTCTACATACATCCCAGTA 57.279 34.615 0.00 0.00 38.01 2.74
3560 6270 5.957771 AACATGTCTACATACATCCCAGT 57.042 39.130 0.00 0.00 38.01 4.00
3561 6271 8.807118 ACTATAACATGTCTACATACATCCCAG 58.193 37.037 0.00 0.00 38.01 4.45
3562 6272 8.585018 CACTATAACATGTCTACATACATCCCA 58.415 37.037 0.00 0.00 38.01 4.37
3563 6273 8.035394 CCACTATAACATGTCTACATACATCCC 58.965 40.741 0.00 0.00 38.01 3.85
3564 6274 8.035394 CCCACTATAACATGTCTACATACATCC 58.965 40.741 0.00 0.00 38.01 3.51
3565 6275 8.585881 ACCCACTATAACATGTCTACATACATC 58.414 37.037 0.00 0.00 38.01 3.06
3566 6276 8.492415 ACCCACTATAACATGTCTACATACAT 57.508 34.615 0.00 0.00 40.75 2.29
3567 6277 7.907841 ACCCACTATAACATGTCTACATACA 57.092 36.000 0.00 0.00 34.26 2.29
3568 6278 9.042008 CAAACCCACTATAACATGTCTACATAC 57.958 37.037 0.00 0.00 34.26 2.39
3569 6279 8.764558 ACAAACCCACTATAACATGTCTACATA 58.235 33.333 0.00 0.00 34.26 2.29
3570 6280 7.630082 ACAAACCCACTATAACATGTCTACAT 58.370 34.615 0.00 0.00 36.96 2.29
3571 6281 7.011499 ACAAACCCACTATAACATGTCTACA 57.989 36.000 0.00 0.00 0.00 2.74
3572 6282 7.604927 TGAACAAACCCACTATAACATGTCTAC 59.395 37.037 0.00 0.00 0.00 2.59
3573 6283 7.604927 GTGAACAAACCCACTATAACATGTCTA 59.395 37.037 0.00 0.00 0.00 2.59
3574 6284 6.430000 GTGAACAAACCCACTATAACATGTCT 59.570 38.462 0.00 0.00 0.00 3.41
3575 6285 6.430000 AGTGAACAAACCCACTATAACATGTC 59.570 38.462 0.00 0.00 41.38 3.06
3576 6286 6.303839 AGTGAACAAACCCACTATAACATGT 58.696 36.000 0.00 0.00 41.38 3.21
3577 6287 6.429692 TGAGTGAACAAACCCACTATAACATG 59.570 38.462 0.00 0.00 43.02 3.21
3578 6288 6.539173 TGAGTGAACAAACCCACTATAACAT 58.461 36.000 0.00 0.00 43.02 2.71
3579 6289 5.931294 TGAGTGAACAAACCCACTATAACA 58.069 37.500 0.00 0.00 43.02 2.41
3580 6290 7.448748 AATGAGTGAACAAACCCACTATAAC 57.551 36.000 0.00 0.00 43.02 1.89
3581 6291 7.721842 TGAAATGAGTGAACAAACCCACTATAA 59.278 33.333 0.00 0.00 43.02 0.98
3582 6292 7.227873 TGAAATGAGTGAACAAACCCACTATA 58.772 34.615 0.00 0.00 43.02 1.31
3583 6293 6.068010 TGAAATGAGTGAACAAACCCACTAT 58.932 36.000 0.00 0.00 43.02 2.12
3584 6294 5.441500 TGAAATGAGTGAACAAACCCACTA 58.558 37.500 0.00 0.00 43.02 2.74
3585 6295 4.277476 TGAAATGAGTGAACAAACCCACT 58.723 39.130 0.00 0.00 45.37 4.00
3586 6296 4.647424 TGAAATGAGTGAACAAACCCAC 57.353 40.909 0.00 0.00 0.00 4.61
3587 6297 5.221422 GGATTGAAATGAGTGAACAAACCCA 60.221 40.000 0.00 0.00 30.78 4.51
3588 6298 5.221422 TGGATTGAAATGAGTGAACAAACCC 60.221 40.000 0.00 0.00 34.22 4.11
3589 6299 5.841810 TGGATTGAAATGAGTGAACAAACC 58.158 37.500 0.00 0.00 35.18 3.27
3590 6300 9.079833 CATATGGATTGAAATGAGTGAACAAAC 57.920 33.333 0.00 0.00 0.00 2.93
3591 6301 8.805175 ACATATGGATTGAAATGAGTGAACAAA 58.195 29.630 7.80 0.00 0.00 2.83
3592 6302 8.352137 ACATATGGATTGAAATGAGTGAACAA 57.648 30.769 7.80 0.00 0.00 2.83
3593 6303 7.943079 ACATATGGATTGAAATGAGTGAACA 57.057 32.000 7.80 0.00 0.00 3.18
3594 6304 9.113838 ACTACATATGGATTGAAATGAGTGAAC 57.886 33.333 7.80 0.00 0.00 3.18
3595 6305 9.330063 GACTACATATGGATTGAAATGAGTGAA 57.670 33.333 7.80 0.00 0.00 3.18
3596 6306 7.933577 GGACTACATATGGATTGAAATGAGTGA 59.066 37.037 7.80 0.00 0.00 3.41
3597 6307 7.716560 TGGACTACATATGGATTGAAATGAGTG 59.283 37.037 7.80 0.00 0.00 3.51
3598 6308 7.805163 TGGACTACATATGGATTGAAATGAGT 58.195 34.615 7.80 0.00 0.00 3.41
3599 6309 8.859236 ATGGACTACATATGGATTGAAATGAG 57.141 34.615 7.80 0.00 38.26 2.90
3637 6347 9.862371 CCTTCGCTCACTATTATAAGATGTTAT 57.138 33.333 0.29 0.29 33.25 1.89
3638 6348 8.304596 CCCTTCGCTCACTATTATAAGATGTTA 58.695 37.037 0.00 0.00 0.00 2.41
3639 6349 7.015292 TCCCTTCGCTCACTATTATAAGATGTT 59.985 37.037 0.00 0.00 0.00 2.71
3640 6350 6.493802 TCCCTTCGCTCACTATTATAAGATGT 59.506 38.462 0.00 0.00 0.00 3.06
3641 6351 6.925211 TCCCTTCGCTCACTATTATAAGATG 58.075 40.000 0.00 0.00 0.00 2.90
3642 6352 6.722129 ACTCCCTTCGCTCACTATTATAAGAT 59.278 38.462 0.00 0.00 0.00 2.40
3643 6353 6.069331 ACTCCCTTCGCTCACTATTATAAGA 58.931 40.000 0.00 0.00 0.00 2.10
3644 6354 6.334102 ACTCCCTTCGCTCACTATTATAAG 57.666 41.667 0.00 0.00 0.00 1.73
3645 6355 8.418597 AATACTCCCTTCGCTCACTATTATAA 57.581 34.615 0.00 0.00 0.00 0.98
3646 6356 8.418597 AAATACTCCCTTCGCTCACTATTATA 57.581 34.615 0.00 0.00 0.00 0.98
3647 6357 6.919775 AATACTCCCTTCGCTCACTATTAT 57.080 37.500 0.00 0.00 0.00 1.28
3648 6358 6.726490 AAATACTCCCTTCGCTCACTATTA 57.274 37.500 0.00 0.00 0.00 0.98
3649 6359 5.615925 AAATACTCCCTTCGCTCACTATT 57.384 39.130 0.00 0.00 0.00 1.73
3650 6360 6.726490 TTAAATACTCCCTTCGCTCACTAT 57.274 37.500 0.00 0.00 0.00 2.12
3651 6361 6.726490 ATTAAATACTCCCTTCGCTCACTA 57.274 37.500 0.00 0.00 0.00 2.74
3652 6362 5.615925 ATTAAATACTCCCTTCGCTCACT 57.384 39.130 0.00 0.00 0.00 3.41
3653 6363 6.679327 AAATTAAATACTCCCTTCGCTCAC 57.321 37.500 0.00 0.00 0.00 3.51
3654 6364 7.494625 CACTAAATTAAATACTCCCTTCGCTCA 59.505 37.037 0.00 0.00 0.00 4.26
3655 6365 7.709613 TCACTAAATTAAATACTCCCTTCGCTC 59.290 37.037 0.00 0.00 0.00 5.03
3656 6366 7.562135 TCACTAAATTAAATACTCCCTTCGCT 58.438 34.615 0.00 0.00 0.00 4.93
3657 6367 7.781548 TCACTAAATTAAATACTCCCTTCGC 57.218 36.000 0.00 0.00 0.00 4.70
3658 6368 9.542462 TCATCACTAAATTAAATACTCCCTTCG 57.458 33.333 0.00 0.00 0.00 3.79
3726 6436 7.642186 TGGCCATTATTACCTCAGCAATATAT 58.358 34.615 0.00 0.00 0.00 0.86
3732 6442 3.138098 TGATGGCCATTATTACCTCAGCA 59.862 43.478 21.84 5.40 0.00 4.41
3733 6443 3.503748 GTGATGGCCATTATTACCTCAGC 59.496 47.826 21.84 2.44 0.00 4.26
3734 6444 4.978099 AGTGATGGCCATTATTACCTCAG 58.022 43.478 21.84 0.00 0.00 3.35
3735 6445 6.508030 TTAGTGATGGCCATTATTACCTCA 57.492 37.500 21.84 8.66 0.00 3.86
3736 6446 8.409358 AATTTAGTGATGGCCATTATTACCTC 57.591 34.615 21.84 5.64 0.00 3.85
3737 6447 9.875708 TTAATTTAGTGATGGCCATTATTACCT 57.124 29.630 21.84 11.43 0.00 3.08
3745 6455 6.496911 GGGGTATTTAATTTAGTGATGGCCAT 59.503 38.462 20.96 20.96 0.00 4.40
3746 6456 5.836358 GGGGTATTTAATTTAGTGATGGCCA 59.164 40.000 8.56 8.56 0.00 5.36
3747 6457 5.245301 GGGGGTATTTAATTTAGTGATGGCC 59.755 44.000 0.00 0.00 0.00 5.36
3748 6458 6.075315 AGGGGGTATTTAATTTAGTGATGGC 58.925 40.000 0.00 0.00 0.00 4.40
3750 6460 7.521585 GCGAAGGGGGTATTTAATTTAGTGATG 60.522 40.741 0.00 0.00 0.00 3.07
3752 6462 5.824097 GCGAAGGGGGTATTTAATTTAGTGA 59.176 40.000 0.00 0.00 0.00 3.41
3753 6463 5.826208 AGCGAAGGGGGTATTTAATTTAGTG 59.174 40.000 0.00 0.00 0.00 2.74
3755 6465 6.017357 GTGAGCGAAGGGGGTATTTAATTTAG 60.017 42.308 0.00 0.00 0.00 1.85
3757 6467 4.643334 GTGAGCGAAGGGGGTATTTAATTT 59.357 41.667 0.00 0.00 0.00 1.82
3758 6468 4.079958 AGTGAGCGAAGGGGGTATTTAATT 60.080 41.667 0.00 0.00 0.00 1.40
3759 6469 3.458487 AGTGAGCGAAGGGGGTATTTAAT 59.542 43.478 0.00 0.00 0.00 1.40
3760 6470 2.841881 AGTGAGCGAAGGGGGTATTTAA 59.158 45.455 0.00 0.00 0.00 1.52
3761 6471 2.474112 AGTGAGCGAAGGGGGTATTTA 58.526 47.619 0.00 0.00 0.00 1.40
3762 6472 1.286248 AGTGAGCGAAGGGGGTATTT 58.714 50.000 0.00 0.00 0.00 1.40
3763 6473 1.286248 AAGTGAGCGAAGGGGGTATT 58.714 50.000 0.00 0.00 0.00 1.89
3766 6476 1.551019 GGTAAGTGAGCGAAGGGGGT 61.551 60.000 0.00 0.00 0.00 4.95
3771 6805 9.745880 TTAAGAATTATAGGTAAGTGAGCGAAG 57.254 33.333 0.00 0.00 0.00 3.79
3802 6837 5.625150 AGTTGGATCTGTTATAAGATGGCC 58.375 41.667 0.00 0.00 37.03 5.36
3935 6987 4.455533 TCAATGTGGACATAGTCTGCAAAC 59.544 41.667 0.00 0.00 35.10 2.93
3938 6990 3.007831 TGTCAATGTGGACATAGTCTGCA 59.992 43.478 0.00 0.00 42.56 4.41
3988 7043 5.847111 ATATTGCATGCAATTCTCACAGT 57.153 34.783 41.74 23.19 43.32 3.55
4016 7071 4.770010 AGGTGGAAGTTTGACAAAGTTTGA 59.230 37.500 22.23 8.74 34.32 2.69
4017 7072 5.072040 AGGTGGAAGTTTGACAAAGTTTG 57.928 39.130 19.45 14.13 34.32 2.93
4026 7081 7.041644 CGATTAACTAACAAGGTGGAAGTTTGA 60.042 37.037 0.00 0.00 31.75 2.69
4118 7177 4.580868 TGCATGCCATCAACAATGAAAAT 58.419 34.783 16.68 0.00 39.49 1.82
4122 7181 2.172679 ACTGCATGCCATCAACAATGA 58.827 42.857 16.68 0.00 37.59 2.57
4124 7183 2.300723 ACAACTGCATGCCATCAACAAT 59.699 40.909 16.68 0.00 0.00 2.71
4161 7220 9.614792 GTTATAGACTGGAATTGGTTAACAGAT 57.385 33.333 8.10 0.00 33.57 2.90
4162 7221 8.044908 GGTTATAGACTGGAATTGGTTAACAGA 58.955 37.037 8.10 0.00 33.57 3.41
4168 7227 7.993183 CACATAGGTTATAGACTGGAATTGGTT 59.007 37.037 0.00 0.00 0.00 3.67
4169 7228 7.509546 CACATAGGTTATAGACTGGAATTGGT 58.490 38.462 0.00 0.00 0.00 3.67
4176 7235 4.345257 ACAGGCACATAGGTTATAGACTGG 59.655 45.833 3.82 0.00 34.55 4.00
4202 7261 6.549061 CGATATAATGAAGACATGCCAATGG 58.451 40.000 0.00 0.00 38.19 3.16
4208 7267 7.968246 AGTAATGCGATATAATGAAGACATGC 58.032 34.615 0.00 0.00 36.79 4.06
4236 7295 9.533253 GGGACCATGAATCAAACAATAAATTAG 57.467 33.333 0.00 0.00 0.00 1.73
4305 7364 3.914426 ACTTCTGTAACTATGGGCAGG 57.086 47.619 0.00 0.00 0.00 4.85
4374 7438 9.517868 AATGGAAAAATAAAAGATTGGCAATGA 57.482 25.926 19.07 0.00 0.00 2.57
4394 7458 6.957631 AGACAGGTACAATATGTGAATGGAA 58.042 36.000 0.00 0.00 0.00 3.53
4432 7496 8.471609 TGTAATGAACATCATCAAAGCATGATT 58.528 29.630 0.00 0.00 40.86 2.57
4447 7511 6.598064 GGTGCTTAAGGTAGTGTAATGAACAT 59.402 38.462 4.29 0.00 41.10 2.71
4469 7533 1.470098 GAAATGCAGCAGGTACAGGTG 59.530 52.381 0.00 11.13 46.08 4.00
4495 7559 1.160329 GCACCTGCAACGAGTTCACT 61.160 55.000 0.00 0.00 41.59 3.41
4496 7560 1.160329 AGCACCTGCAACGAGTTCAC 61.160 55.000 0.00 0.00 45.16 3.18
4542 7610 5.465532 TTTCAGCATGGCTTGTCAAATTA 57.534 34.783 2.12 0.00 36.40 1.40
4680 7751 8.700973 TGCATCTACTTGACTATACATTTGGTA 58.299 33.333 0.00 0.00 36.16 3.25
4881 8030 5.929992 TCGAAAACGCTCTTATATTATGGGG 59.070 40.000 0.00 0.00 0.00 4.96
4882 8031 6.422701 TGTCGAAAACGCTCTTATATTATGGG 59.577 38.462 0.00 0.00 0.00 4.00
4883 8032 7.169308 AGTGTCGAAAACGCTCTTATATTATGG 59.831 37.037 0.00 0.00 45.69 2.74
4884 8033 8.062231 AGTGTCGAAAACGCTCTTATATTATG 57.938 34.615 0.00 0.00 45.69 1.90
4885 8034 9.909644 ATAGTGTCGAAAACGCTCTTATATTAT 57.090 29.630 0.00 0.00 45.69 1.28
4887 8036 9.178427 GTATAGTGTCGAAAACGCTCTTATATT 57.822 33.333 0.00 0.00 45.69 1.28
4888 8037 8.566260 AGTATAGTGTCGAAAACGCTCTTATAT 58.434 33.333 0.00 0.00 45.69 0.86
4889 8038 7.923888 AGTATAGTGTCGAAAACGCTCTTATA 58.076 34.615 0.00 0.00 45.69 0.98
4890 8039 6.793349 AGTATAGTGTCGAAAACGCTCTTAT 58.207 36.000 0.00 0.00 45.69 1.73
4891 8040 6.187125 AGTATAGTGTCGAAAACGCTCTTA 57.813 37.500 0.00 0.00 45.69 2.10
4892 8041 5.056894 AGTATAGTGTCGAAAACGCTCTT 57.943 39.130 0.00 0.00 45.69 2.85
4893 8042 4.698583 AGTATAGTGTCGAAAACGCTCT 57.301 40.909 0.00 0.00 45.69 4.09
4921 8070 8.269317 TCCGTCCCATAATATAAGAGTGTTTTT 58.731 33.333 0.00 0.00 0.00 1.94
4922 8071 7.798071 TCCGTCCCATAATATAAGAGTGTTTT 58.202 34.615 0.00 0.00 0.00 2.43
4923 8072 7.369551 TCCGTCCCATAATATAAGAGTGTTT 57.630 36.000 0.00 0.00 0.00 2.83
4924 8073 6.014499 CCTCCGTCCCATAATATAAGAGTGTT 60.014 42.308 0.00 0.00 0.00 3.32
4925 8074 5.480772 CCTCCGTCCCATAATATAAGAGTGT 59.519 44.000 0.00 0.00 0.00 3.55
4926 8075 5.105310 CCCTCCGTCCCATAATATAAGAGTG 60.105 48.000 0.00 0.00 0.00 3.51
4927 8076 5.024118 CCCTCCGTCCCATAATATAAGAGT 58.976 45.833 0.00 0.00 0.00 3.24
4928 8077 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
4929 8078 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
4930 8079 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
4931 8080 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
4932 8081 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
4933 8082 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
4934 8083 4.294168 AGATACTCCCTCCGTCCCATAATA 59.706 45.833 0.00 0.00 0.00 0.98
4935 8084 3.077695 AGATACTCCCTCCGTCCCATAAT 59.922 47.826 0.00 0.00 0.00 1.28
4936 8085 2.449730 AGATACTCCCTCCGTCCCATAA 59.550 50.000 0.00 0.00 0.00 1.90
4937 8086 2.071372 AGATACTCCCTCCGTCCCATA 58.929 52.381 0.00 0.00 0.00 2.74
4938 8087 0.861155 AGATACTCCCTCCGTCCCAT 59.139 55.000 0.00 0.00 0.00 4.00
4939 8088 0.106167 CAGATACTCCCTCCGTCCCA 60.106 60.000 0.00 0.00 0.00 4.37
4940 8089 0.106116 ACAGATACTCCCTCCGTCCC 60.106 60.000 0.00 0.00 0.00 4.46
4941 8090 1.777941 AACAGATACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
4942 8091 2.293955 GCTAACAGATACTCCCTCCGTC 59.706 54.545 0.00 0.00 0.00 4.79
4943 8092 2.091775 AGCTAACAGATACTCCCTCCGT 60.092 50.000 0.00 0.00 0.00 4.69
4944 8093 2.294791 CAGCTAACAGATACTCCCTCCG 59.705 54.545 0.00 0.00 0.00 4.63
4945 8094 3.301274 ACAGCTAACAGATACTCCCTCC 58.699 50.000 0.00 0.00 0.00 4.30
4946 8095 5.346181 AAACAGCTAACAGATACTCCCTC 57.654 43.478 0.00 0.00 0.00 4.30
4947 8096 5.491982 CAAAACAGCTAACAGATACTCCCT 58.508 41.667 0.00 0.00 0.00 4.20
4948 8097 4.636206 CCAAAACAGCTAACAGATACTCCC 59.364 45.833 0.00 0.00 0.00 4.30
4949 8098 5.246307 ACCAAAACAGCTAACAGATACTCC 58.754 41.667 0.00 0.00 0.00 3.85
4950 8099 6.204882 ACAACCAAAACAGCTAACAGATACTC 59.795 38.462 0.00 0.00 0.00 2.59
4951 8100 6.062095 ACAACCAAAACAGCTAACAGATACT 58.938 36.000 0.00 0.00 0.00 2.12
4952 8101 6.313744 ACAACCAAAACAGCTAACAGATAC 57.686 37.500 0.00 0.00 0.00 2.24
4962 8111 5.733226 ATAAGCAAAACAACCAAAACAGC 57.267 34.783 0.00 0.00 0.00 4.40
5010 8159 3.373830 TCCAATCCAAATTTAGCCCTGG 58.626 45.455 0.00 0.00 0.00 4.45
5015 8164 2.103094 GCCCCTCCAATCCAAATTTAGC 59.897 50.000 0.00 0.00 0.00 3.09
5018 8167 2.647846 AGCCCCTCCAATCCAAATTT 57.352 45.000 0.00 0.00 0.00 1.82
5069 8218 8.129211 AGTGTTAAAAATGACTGCTTCAAGTAC 58.871 33.333 0.00 0.00 37.92 2.73
5133 8282 8.756927 TCACTTTCATTACTCTCTTCTGATGAT 58.243 33.333 0.00 0.00 0.00 2.45
5205 8354 5.712152 CTTGGCTCAACTTTTACAAGGAT 57.288 39.130 0.00 0.00 33.82 3.24
5220 8399 2.368439 TGTCATAACATGCCTTGGCTC 58.632 47.619 13.18 0.00 0.00 4.70
5238 8417 5.339477 AGGGAGTAGTAACTAACACCATGT 58.661 41.667 0.00 0.00 35.56 3.21
5256 8435 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
5257 8436 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
5258 8437 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
5259 8438 5.408356 CGTTCTTATATTATGGGACGGAGG 58.592 45.833 0.00 0.00 0.00 4.30
5260 8439 4.863131 GCGTTCTTATATTATGGGACGGAG 59.137 45.833 11.52 0.00 0.00 4.63
5261 8440 4.525487 AGCGTTCTTATATTATGGGACGGA 59.475 41.667 11.52 0.00 0.00 4.69
5262 8441 4.817517 AGCGTTCTTATATTATGGGACGG 58.182 43.478 11.52 0.00 0.00 4.79
5263 8442 6.780706 AAAGCGTTCTTATATTATGGGACG 57.219 37.500 7.50 7.50 31.02 4.79
5264 8443 8.068380 GTCAAAAGCGTTCTTATATTATGGGAC 58.932 37.037 0.00 0.00 31.02 4.46
5265 8444 7.771361 TGTCAAAAGCGTTCTTATATTATGGGA 59.229 33.333 0.00 0.00 31.02 4.37
5266 8445 7.855904 GTGTCAAAAGCGTTCTTATATTATGGG 59.144 37.037 0.00 0.00 31.02 4.00
5267 8446 8.612619 AGTGTCAAAAGCGTTCTTATATTATGG 58.387 33.333 0.00 0.00 31.02 2.74
5270 8449 9.865321 ACTAGTGTCAAAAGCGTTCTTATATTA 57.135 29.630 0.00 0.00 31.02 0.98
5271 8450 8.773404 ACTAGTGTCAAAAGCGTTCTTATATT 57.227 30.769 0.00 0.00 31.02 1.28
5274 8453 9.517609 CTATACTAGTGTCAAAAGCGTTCTTAT 57.482 33.333 5.39 0.00 31.02 1.73
5275 8454 8.517878 ACTATACTAGTGTCAAAAGCGTTCTTA 58.482 33.333 5.39 0.00 37.69 2.10
5276 8455 7.376615 ACTATACTAGTGTCAAAAGCGTTCTT 58.623 34.615 5.39 0.00 37.69 2.52
5277 8456 6.921914 ACTATACTAGTGTCAAAAGCGTTCT 58.078 36.000 5.39 0.00 37.69 3.01
5305 8484 8.852135 TCTGTCCCAAAATATAAGAACGTTTTT 58.148 29.630 9.22 9.22 0.00 1.94
5306 8485 8.398878 TCTGTCCCAAAATATAAGAACGTTTT 57.601 30.769 0.46 0.00 0.00 2.43
5307 8486 7.120726 CCTCTGTCCCAAAATATAAGAACGTTT 59.879 37.037 0.46 0.00 0.00 3.60
5308 8487 6.598064 CCTCTGTCCCAAAATATAAGAACGTT 59.402 38.462 0.00 0.00 0.00 3.99
5309 8488 6.113411 CCTCTGTCCCAAAATATAAGAACGT 58.887 40.000 0.00 0.00 0.00 3.99
5310 8489 5.527582 CCCTCTGTCCCAAAATATAAGAACG 59.472 44.000 0.00 0.00 0.00 3.95
5311 8490 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
5312 8491 6.447084 ACTCCCTCTGTCCCAAAATATAAGAA 59.553 38.462 0.00 0.00 0.00 2.52
5313 8492 5.970640 ACTCCCTCTGTCCCAAAATATAAGA 59.029 40.000 0.00 0.00 0.00 2.10
5314 8493 6.253946 ACTCCCTCTGTCCCAAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
5315 8494 6.906901 AGTACTCCCTCTGTCCCAAAATATAA 59.093 38.462 0.00 0.00 0.00 0.98
5316 8495 6.449956 AGTACTCCCTCTGTCCCAAAATATA 58.550 40.000 0.00 0.00 0.00 0.86
5317 8496 5.289510 AGTACTCCCTCTGTCCCAAAATAT 58.710 41.667 0.00 0.00 0.00 1.28
5318 8497 4.695606 AGTACTCCCTCTGTCCCAAAATA 58.304 43.478 0.00 0.00 0.00 1.40
5319 8498 3.532102 AGTACTCCCTCTGTCCCAAAAT 58.468 45.455 0.00 0.00 0.00 1.82
5320 8499 2.986050 AGTACTCCCTCTGTCCCAAAA 58.014 47.619 0.00 0.00 0.00 2.44
5321 8500 2.715763 AGTACTCCCTCTGTCCCAAA 57.284 50.000 0.00 0.00 0.00 3.28
5322 8501 2.715763 AAGTACTCCCTCTGTCCCAA 57.284 50.000 0.00 0.00 0.00 4.12
5323 8502 3.839323 TTAAGTACTCCCTCTGTCCCA 57.161 47.619 0.00 0.00 0.00 4.37
5324 8503 4.715297 TGAATTAAGTACTCCCTCTGTCCC 59.285 45.833 0.00 0.00 0.00 4.46
5325 8504 5.422650 ACTGAATTAAGTACTCCCTCTGTCC 59.577 44.000 0.00 0.00 0.00 4.02
5326 8505 6.153000 TCACTGAATTAAGTACTCCCTCTGTC 59.847 42.308 0.00 0.00 0.00 3.51
5327 8506 6.017192 TCACTGAATTAAGTACTCCCTCTGT 58.983 40.000 0.00 0.00 0.00 3.41
5328 8507 6.531503 TCACTGAATTAAGTACTCCCTCTG 57.468 41.667 0.00 0.00 0.00 3.35
5329 8508 6.325286 GGATCACTGAATTAAGTACTCCCTCT 59.675 42.308 10.21 0.00 29.62 3.69
5330 8509 6.325286 AGGATCACTGAATTAAGTACTCCCTC 59.675 42.308 15.11 0.00 33.44 4.30
5331 8510 6.206042 AGGATCACTGAATTAAGTACTCCCT 58.794 40.000 15.11 8.58 33.44 4.20
5332 8511 6.487299 AGGATCACTGAATTAAGTACTCCC 57.513 41.667 15.11 6.92 33.44 4.30
5333 8512 9.535878 CTTAAGGATCACTGAATTAAGTACTCC 57.464 37.037 12.36 12.36 33.28 3.85
5452 8631 0.250234 TTGGATGAGGACCTTGCTCG 59.750 55.000 0.00 0.00 37.69 5.03
5466 8645 2.606795 CGTGTCCGTTGCATTTTTGGAT 60.607 45.455 0.00 0.00 0.00 3.41
5493 8672 2.887152 AGACATGCTTCACCAAAAGTCC 59.113 45.455 0.00 0.00 0.00 3.85
5494 8673 3.304928 CCAGACATGCTTCACCAAAAGTC 60.305 47.826 0.00 0.00 0.00 3.01
5495 8674 2.624838 CCAGACATGCTTCACCAAAAGT 59.375 45.455 0.00 0.00 0.00 2.66
5555 8734 2.138320 CACTGCGGGCTGTTATATCAG 58.862 52.381 6.46 6.46 38.35 2.90
5556 8735 1.202639 CCACTGCGGGCTGTTATATCA 60.203 52.381 0.00 0.00 0.00 2.15
5557 8736 1.070134 TCCACTGCGGGCTGTTATATC 59.930 52.381 0.00 0.00 34.36 1.63
5558 8737 1.128200 TCCACTGCGGGCTGTTATAT 58.872 50.000 0.00 0.00 34.36 0.86
5559 8738 1.070134 GATCCACTGCGGGCTGTTATA 59.930 52.381 0.00 0.00 34.36 0.98
5560 8739 0.179045 GATCCACTGCGGGCTGTTAT 60.179 55.000 0.00 0.00 34.36 1.89
5561 8740 1.220749 GATCCACTGCGGGCTGTTA 59.779 57.895 0.00 0.00 34.36 2.41
5562 8741 2.045926 GATCCACTGCGGGCTGTT 60.046 61.111 0.00 0.00 34.36 3.16
5563 8742 2.202236 AATGATCCACTGCGGGCTGT 62.202 55.000 0.00 0.00 34.36 4.40
5564 8743 1.452651 AATGATCCACTGCGGGCTG 60.453 57.895 0.00 0.00 34.36 4.85
5565 8744 1.452651 CAATGATCCACTGCGGGCT 60.453 57.895 0.00 0.00 34.36 5.19
5566 8745 3.113745 CAATGATCCACTGCGGGC 58.886 61.111 0.00 0.00 34.36 6.13
5567 8746 3.113745 GCAATGATCCACTGCGGG 58.886 61.111 0.00 0.00 34.36 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.