Multiple sequence alignment - TraesCS4B01G338600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G338600 chr4B 100.000 6849 0 0 1 6849 631576564 631569716 0.000000e+00 12648.0
1 TraesCS4B01G338600 chr4B 80.577 381 56 9 1 364 72658695 72658316 1.880000e-70 278.0
2 TraesCS4B01G338600 chr4D 93.794 2143 101 21 3697 5821 493330494 493328366 0.000000e+00 3192.0
3 TraesCS4B01G338600 chr4D 91.590 1082 52 19 600 1662 493337711 493336650 0.000000e+00 1458.0
4 TraesCS4B01G338600 chr4D 82.945 1372 110 56 1861 3151 493335377 493334049 0.000000e+00 1123.0
5 TraesCS4B01G338600 chr4D 83.678 919 97 21 5727 6605 493814274 493813369 0.000000e+00 817.0
6 TraesCS4B01G338600 chr4D 86.245 538 54 9 5926 6454 493327980 493327454 3.590000e-157 566.0
7 TraesCS4B01G338600 chr4D 90.773 401 20 9 3048 3438 493331164 493330771 2.830000e-143 520.0
8 TraesCS4B01G338600 chr4D 88.378 413 41 3 6045 6454 493326318 493325910 2.220000e-134 490.0
9 TraesCS4B01G338600 chr4D 88.378 413 39 3 6045 6454 493322535 493322129 7.980000e-134 488.0
10 TraesCS4B01G338600 chr4D 88.136 413 43 2 6045 6454 493324807 493324398 2.870000e-133 486.0
11 TraesCS4B01G338600 chr4D 87.893 413 44 2 6045 6454 493323299 493322890 1.340000e-131 481.0
12 TraesCS4B01G338600 chr4D 87.893 413 44 2 6045 6454 493325585 493325176 1.340000e-131 481.0
13 TraesCS4B01G338600 chr4D 87.651 413 45 2 6045 6454 493320840 493320431 6.220000e-130 475.0
14 TraesCS4B01G338600 chr4D 81.628 430 39 27 6446 6849 493319362 493318947 3.080000e-83 320.0
15 TraesCS4B01G338600 chr4D 94.702 151 7 1 6700 6849 493813212 493813062 4.130000e-57 233.0
16 TraesCS4B01G338600 chr4D 86.432 199 10 14 1676 1867 493336562 493336374 1.160000e-47 202.0
17 TraesCS4B01G338600 chr4D 100.000 31 0 0 5779 5809 493328322 493328292 2.670000e-04 58.4
18 TraesCS4B01G338600 chr5A 94.545 1870 72 15 3971 5821 672837845 672835987 0.000000e+00 2861.0
19 TraesCS4B01G338600 chr5A 85.053 2850 221 100 600 3326 672842134 672839367 0.000000e+00 2713.0
20 TraesCS4B01G338600 chr5A 87.288 944 83 20 3048 3972 672838812 672837887 0.000000e+00 1044.0
21 TraesCS4B01G338600 chr5A 84.100 956 93 33 5926 6849 672835731 672834803 0.000000e+00 869.0
22 TraesCS4B01G338600 chr5A 84.190 253 39 1 1 252 469099992 469099740 1.910000e-60 244.0
23 TraesCS4B01G338600 chr6A 84.548 1495 212 14 4316 5803 21636489 21635007 0.000000e+00 1463.0
24 TraesCS4B01G338600 chr6A 89.712 243 23 2 1440 1680 21637288 21637046 6.670000e-80 309.0
25 TraesCS4B01G338600 chr6D 84.080 1495 218 15 4317 5803 22174155 22172673 0.000000e+00 1424.0
26 TraesCS4B01G338600 chr6D 92.857 224 16 0 1440 1663 22175122 22174899 6.620000e-85 326.0
27 TraesCS4B01G338600 chr6B 83.288 1472 225 17 4340 5803 36809465 36808007 0.000000e+00 1336.0
28 TraesCS4B01G338600 chr6B 81.474 475 83 4 5333 5803 36471289 36470816 1.080000e-102 385.0
29 TraesCS4B01G338600 chr6B 78.611 547 92 12 2 524 225351032 225351577 8.510000e-89 339.0
30 TraesCS4B01G338600 chr6B 92.857 224 16 0 1440 1663 36811134 36810911 6.620000e-85 326.0
31 TraesCS4B01G338600 chr6B 90.196 153 13 2 4966 5117 36705719 36705568 1.510000e-46 198.0
32 TraesCS4B01G338600 chr1A 79.438 1352 226 35 4344 5666 257967662 257968990 0.000000e+00 909.0
33 TraesCS4B01G338600 chr1A 80.211 475 70 12 1 455 130129152 130129622 1.100000e-87 335.0
34 TraesCS4B01G338600 chr1A 87.892 223 27 0 1440 1662 257960312 257960534 5.270000e-66 263.0
35 TraesCS4B01G338600 chr1B 79.262 1355 223 42 4344 5666 297299412 297300740 0.000000e+00 893.0
36 TraesCS4B01G338600 chr1B 88.341 223 26 0 1440 1662 297294708 297294930 1.130000e-67 268.0
37 TraesCS4B01G338600 chr1D 79.084 1353 229 38 4344 5666 203430959 203432287 0.000000e+00 881.0
38 TraesCS4B01G338600 chr3A 81.140 456 71 14 7 455 577629640 577629193 1.090000e-92 351.0
39 TraesCS4B01G338600 chr3A 82.609 322 46 8 4425 4741 217963243 217962927 6.770000e-70 276.0
40 TraesCS4B01G338600 chr7B 80.126 478 71 13 1 455 144699812 144700288 1.100000e-87 335.0
41 TraesCS4B01G338600 chrUn 83.516 364 49 4 1 353 27222381 27222744 5.120000e-86 329.0
42 TraesCS4B01G338600 chrUn 77.232 448 78 15 9 441 932090 931652 2.470000e-59 241.0
43 TraesCS4B01G338600 chrUn 77.232 448 78 15 9 441 947617 948055 2.470000e-59 241.0
44 TraesCS4B01G338600 chr2B 79.176 461 82 10 7 455 787534943 787534485 2.400000e-79 307.0
45 TraesCS4B01G338600 chr7D 81.918 365 57 6 1 356 531175156 531175520 4.020000e-77 300.0
46 TraesCS4B01G338600 chr7D 76.638 458 78 20 7 454 89309445 89309883 6.910000e-55 226.0
47 TraesCS4B01G338600 chr7D 77.632 152 25 6 304 455 175700214 175700356 4.400000e-12 84.2
48 TraesCS4B01G338600 chr7D 81.188 101 15 3 491 588 23581635 23581734 2.050000e-10 78.7
49 TraesCS4B01G338600 chr7D 100.000 30 0 0 493 522 437202215 437202244 1.000000e-03 56.5
50 TraesCS4B01G338600 chr2D 78.112 466 80 15 2 456 591297264 591296810 6.770000e-70 276.0
51 TraesCS4B01G338600 chr3D 90.741 54 5 0 1583 1636 40754372 40754319 9.530000e-09 73.1
52 TraesCS4B01G338600 chr3B 90.741 54 5 0 1580 1633 64315045 64315098 9.530000e-09 73.1
53 TraesCS4B01G338600 chr4A 88.636 44 5 0 488 531 738896480 738896437 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G338600 chr4B 631569716 631576564 6848 True 12648.00 12648 100.000000 1 6849 1 chr4B.!!$R2 6848
1 TraesCS4B01G338600 chr4D 493318947 493337711 18764 True 738.60 3192 88.695429 600 6849 14 chr4D.!!$R1 6249
2 TraesCS4B01G338600 chr4D 493813062 493814274 1212 True 525.00 817 89.190000 5727 6849 2 chr4D.!!$R2 1122
3 TraesCS4B01G338600 chr5A 672834803 672842134 7331 True 1871.75 2861 87.746500 600 6849 4 chr5A.!!$R2 6249
4 TraesCS4B01G338600 chr6A 21635007 21637288 2281 True 886.00 1463 87.130000 1440 5803 2 chr6A.!!$R1 4363
5 TraesCS4B01G338600 chr6D 22172673 22175122 2449 True 875.00 1424 88.468500 1440 5803 2 chr6D.!!$R1 4363
6 TraesCS4B01G338600 chr6B 36808007 36811134 3127 True 831.00 1336 88.072500 1440 5803 2 chr6B.!!$R3 4363
7 TraesCS4B01G338600 chr6B 225351032 225351577 545 False 339.00 339 78.611000 2 524 1 chr6B.!!$F1 522
8 TraesCS4B01G338600 chr1A 257967662 257968990 1328 False 909.00 909 79.438000 4344 5666 1 chr1A.!!$F3 1322
9 TraesCS4B01G338600 chr1B 297299412 297300740 1328 False 893.00 893 79.262000 4344 5666 1 chr1B.!!$F2 1322
10 TraesCS4B01G338600 chr1D 203430959 203432287 1328 False 881.00 881 79.084000 4344 5666 1 chr1D.!!$F1 1322

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
526 527 0.096976 CCGCATTCATGTCCGTGAAC 59.903 55.0 4.16 0.0 40.60 3.18 F
1345 1369 0.036732 TTGCTTCGGTTCATCCAGCT 59.963 50.0 0.00 0.0 36.54 4.24 F
1923 3549 0.179215 GTCGCGCCACAGAAAATGAG 60.179 55.0 0.00 0.0 0.00 2.90 F
1924 3550 0.320334 TCGCGCCACAGAAAATGAGA 60.320 50.0 0.00 0.0 0.00 3.27 F
2979 4703 0.320771 GGTGAAGAGTGGTGCGTGAT 60.321 55.0 0.00 0.0 0.00 3.06 F
4103 8966 0.518636 GCTCAATTGCTCTTGTGCGA 59.481 50.0 0.00 0.0 36.34 5.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2488 4164 0.172352 GATGGATCGATCTCTCCGGC 59.828 60.000 23.96 6.97 34.05 6.13 R
2980 4704 0.389948 ATCTGGAACGAACGGTCAGC 60.390 55.000 14.00 0.00 32.53 4.26 R
3359 8123 0.471191 TATGTGATGGAGCCCTGCTG 59.529 55.000 0.00 0.00 39.88 4.41 R
3494 8258 0.936600 TGTGCATGTGTGTGTCTTCG 59.063 50.000 0.00 0.00 0.00 3.79 R
4182 9047 1.071071 TCATCGTCGGGGTTTTCTTGT 59.929 47.619 0.00 0.00 0.00 3.16 R
6054 11631 0.033228 CTCCATGGACGGCAGAGATC 59.967 60.000 11.44 0.00 0.00 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.679311 GACAGCTCCATGACCACCA 59.321 57.895 0.00 0.00 0.00 4.17
32 33 0.674895 GACAGCTCCATGACCACCAC 60.675 60.000 0.00 0.00 0.00 4.16
33 34 1.376086 CAGCTCCATGACCACCACA 59.624 57.895 0.00 0.00 0.00 4.17
38 39 0.976641 TCCATGACCACCACAGAGAC 59.023 55.000 0.00 0.00 0.00 3.36
40 41 0.390340 CATGACCACCACAGAGACGG 60.390 60.000 0.00 0.00 0.00 4.79
41 42 1.544825 ATGACCACCACAGAGACGGG 61.545 60.000 0.00 0.00 0.00 5.28
42 43 3.591254 GACCACCACAGAGACGGGC 62.591 68.421 0.00 0.00 0.00 6.13
88 89 1.153489 GAGCTCGCCAAGATCAGCA 60.153 57.895 0.00 0.00 40.27 4.41
94 95 0.107993 CGCCAAGATCAGCAAGGAGA 60.108 55.000 0.00 0.00 0.00 3.71
96 97 1.746516 GCCAAGATCAGCAAGGAGAGG 60.747 57.143 0.00 0.00 0.00 3.69
104 105 1.066858 CAGCAAGGAGAGGTCGCTTAA 60.067 52.381 0.00 0.00 0.00 1.85
105 106 1.066787 AGCAAGGAGAGGTCGCTTAAC 60.067 52.381 0.00 0.00 0.00 2.01
121 122 2.089887 TAACGACTGCTCCGCCAACA 62.090 55.000 0.00 0.00 0.00 3.33
264 265 4.101448 GGCTGTCATGGCCCTCGT 62.101 66.667 0.00 0.00 43.49 4.18
265 266 2.045926 GCTGTCATGGCCCTCGTT 60.046 61.111 0.00 0.00 0.00 3.85
266 267 2.109126 GCTGTCATGGCCCTCGTTC 61.109 63.158 0.00 0.00 0.00 3.95
267 268 1.811266 CTGTCATGGCCCTCGTTCG 60.811 63.158 0.00 0.00 0.00 3.95
268 269 2.511600 GTCATGGCCCTCGTTCGG 60.512 66.667 0.00 0.00 0.00 4.30
269 270 4.467084 TCATGGCCCTCGTTCGGC 62.467 66.667 0.00 2.15 46.29 5.54
276 277 4.735132 CCTCGTTCGGCCGCTTGA 62.735 66.667 23.51 16.26 0.00 3.02
277 278 3.181967 CTCGTTCGGCCGCTTGAG 61.182 66.667 23.51 21.64 0.00 3.02
278 279 4.735132 TCGTTCGGCCGCTTGAGG 62.735 66.667 23.51 11.76 0.00 3.86
280 281 4.388499 GTTCGGCCGCTTGAGGGA 62.388 66.667 23.51 0.00 0.00 4.20
281 282 4.388499 TTCGGCCGCTTGAGGGAC 62.388 66.667 23.51 0.00 0.00 4.46
286 287 3.691342 CCGCTTGAGGGACCACGA 61.691 66.667 0.00 0.00 0.00 4.35
287 288 2.579201 CGCTTGAGGGACCACGAT 59.421 61.111 0.00 0.00 0.00 3.73
288 289 1.811266 CGCTTGAGGGACCACGATG 60.811 63.158 0.00 0.00 0.00 3.84
289 290 1.596934 GCTTGAGGGACCACGATGA 59.403 57.895 0.00 0.00 0.00 2.92
290 291 0.741221 GCTTGAGGGACCACGATGAC 60.741 60.000 0.00 0.00 0.00 3.06
291 292 0.458543 CTTGAGGGACCACGATGACG 60.459 60.000 0.00 0.00 45.75 4.35
292 293 0.896479 TTGAGGGACCACGATGACGA 60.896 55.000 0.00 0.00 42.66 4.20
293 294 0.683179 TGAGGGACCACGATGACGAT 60.683 55.000 0.00 0.00 42.66 3.73
294 295 0.249073 GAGGGACCACGATGACGATG 60.249 60.000 0.00 0.00 42.66 3.84
295 296 1.227263 GGGACCACGATGACGATGG 60.227 63.158 0.00 0.00 42.11 3.51
296 297 1.883084 GGACCACGATGACGATGGC 60.883 63.158 0.00 0.00 41.05 4.40
297 298 1.153647 GACCACGATGACGATGGCA 60.154 57.895 0.00 0.00 41.05 4.92
298 299 1.421410 GACCACGATGACGATGGCAC 61.421 60.000 0.00 0.00 41.05 5.01
299 300 2.173669 CCACGATGACGATGGCACC 61.174 63.158 0.00 0.00 42.66 5.01
300 301 2.202743 ACGATGACGATGGCACCG 60.203 61.111 0.00 0.00 42.66 4.94
301 302 2.961721 CGATGACGATGGCACCGG 60.962 66.667 6.07 0.00 42.66 5.28
302 303 3.272334 GATGACGATGGCACCGGC 61.272 66.667 6.07 1.58 40.13 6.13
321 322 4.980805 GAGACGGCGGTGTGGCAA 62.981 66.667 13.24 0.00 45.16 4.52
322 323 4.988598 AGACGGCGGTGTGGCAAG 62.989 66.667 13.24 0.00 45.16 4.01
347 348 3.475774 GGCCACGCGTACGAGTTG 61.476 66.667 22.31 19.40 43.93 3.16
348 349 3.475774 GCCACGCGTACGAGTTGG 61.476 66.667 22.31 23.91 43.93 3.77
349 350 2.049802 CCACGCGTACGAGTTGGT 60.050 61.111 22.31 6.25 43.93 3.67
350 351 2.084681 CCACGCGTACGAGTTGGTC 61.085 63.158 22.31 0.00 43.93 4.02
361 362 3.826236 CGAGTTGGTCGTCCGATATAT 57.174 47.619 0.00 0.00 44.20 0.86
362 363 3.489444 CGAGTTGGTCGTCCGATATATG 58.511 50.000 0.00 0.00 44.20 1.78
363 364 3.058432 CGAGTTGGTCGTCCGATATATGT 60.058 47.826 0.00 0.00 44.20 2.29
364 365 4.556104 CGAGTTGGTCGTCCGATATATGTT 60.556 45.833 0.00 0.00 44.20 2.71
365 366 5.334337 CGAGTTGGTCGTCCGATATATGTTA 60.334 44.000 0.00 0.00 44.20 2.41
366 367 6.585695 AGTTGGTCGTCCGATATATGTTAT 57.414 37.500 0.00 0.00 36.30 1.89
367 368 6.989659 AGTTGGTCGTCCGATATATGTTATT 58.010 36.000 0.00 0.00 36.30 1.40
368 369 7.439381 AGTTGGTCGTCCGATATATGTTATTT 58.561 34.615 0.00 0.00 36.30 1.40
369 370 7.929785 AGTTGGTCGTCCGATATATGTTATTTT 59.070 33.333 0.00 0.00 36.30 1.82
370 371 9.195411 GTTGGTCGTCCGATATATGTTATTTTA 57.805 33.333 0.00 0.00 36.30 1.52
371 372 9.932207 TTGGTCGTCCGATATATGTTATTTTAT 57.068 29.630 0.00 0.00 36.30 1.40
372 373 9.932207 TGGTCGTCCGATATATGTTATTTTATT 57.068 29.630 0.00 0.00 36.30 1.40
403 404 8.944212 AGTTTTTCTAAACGGTCAAAATATCG 57.056 30.769 0.00 0.00 46.54 2.92
404 405 8.776470 AGTTTTTCTAAACGGTCAAAATATCGA 58.224 29.630 0.00 0.00 46.54 3.59
405 406 8.834212 GTTTTTCTAAACGGTCAAAATATCGAC 58.166 33.333 0.00 0.00 34.79 4.20
406 407 7.894376 TTTCTAAACGGTCAAAATATCGACT 57.106 32.000 0.00 0.00 32.57 4.18
407 408 7.894376 TTCTAAACGGTCAAAATATCGACTT 57.106 32.000 0.00 0.00 32.57 3.01
408 409 7.894376 TCTAAACGGTCAAAATATCGACTTT 57.106 32.000 0.00 0.00 32.57 2.66
409 410 8.314143 TCTAAACGGTCAAAATATCGACTTTT 57.686 30.769 0.00 0.00 32.57 2.27
410 411 8.776470 TCTAAACGGTCAAAATATCGACTTTTT 58.224 29.630 5.12 3.67 32.57 1.94
444 445 9.778993 ATTATGTCTGAACTTCAATGAAATTCG 57.221 29.630 11.73 7.44 31.22 3.34
445 446 6.618287 TGTCTGAACTTCAATGAAATTCGT 57.382 33.333 11.73 0.00 31.22 3.85
446 447 6.658831 TGTCTGAACTTCAATGAAATTCGTC 58.341 36.000 11.73 6.08 31.22 4.20
447 448 6.080406 GTCTGAACTTCAATGAAATTCGTCC 58.920 40.000 11.73 0.00 31.22 4.79
448 449 5.029650 TGAACTTCAATGAAATTCGTCCG 57.970 39.130 11.73 0.00 31.22 4.79
449 450 4.083537 TGAACTTCAATGAAATTCGTCCGG 60.084 41.667 11.73 0.00 31.22 5.14
450 451 3.408634 ACTTCAATGAAATTCGTCCGGT 58.591 40.909 0.00 0.00 31.22 5.28
451 452 3.818773 ACTTCAATGAAATTCGTCCGGTT 59.181 39.130 0.00 0.00 31.22 4.44
452 453 4.277423 ACTTCAATGAAATTCGTCCGGTTT 59.723 37.500 0.00 0.00 31.22 3.27
453 454 4.153958 TCAATGAAATTCGTCCGGTTTG 57.846 40.909 0.00 0.00 31.22 2.93
454 455 3.815962 TCAATGAAATTCGTCCGGTTTGA 59.184 39.130 0.00 0.00 31.22 2.69
455 456 4.276183 TCAATGAAATTCGTCCGGTTTGAA 59.724 37.500 0.00 4.71 31.22 2.69
456 457 5.048364 TCAATGAAATTCGTCCGGTTTGAAT 60.048 36.000 0.00 7.04 31.22 2.57
457 458 4.839668 TGAAATTCGTCCGGTTTGAATT 57.160 36.364 18.79 18.79 42.44 2.17
458 459 4.789784 TGAAATTCGTCCGGTTTGAATTC 58.210 39.130 22.25 17.57 40.42 2.17
459 460 4.276183 TGAAATTCGTCCGGTTTGAATTCA 59.724 37.500 22.25 19.01 40.42 2.57
460 461 5.048364 TGAAATTCGTCCGGTTTGAATTCAT 60.048 36.000 22.25 13.38 40.42 2.57
461 462 4.616181 ATTCGTCCGGTTTGAATTCATC 57.384 40.909 9.40 5.84 0.00 2.92
462 463 1.996898 TCGTCCGGTTTGAATTCATCG 59.003 47.619 9.40 13.04 0.00 3.84
463 464 1.996898 CGTCCGGTTTGAATTCATCGA 59.003 47.619 20.47 0.00 0.00 3.59
464 465 2.413796 CGTCCGGTTTGAATTCATCGAA 59.586 45.455 20.47 7.28 0.00 3.71
465 466 3.063452 CGTCCGGTTTGAATTCATCGAAT 59.937 43.478 20.47 0.00 33.95 3.34
466 467 4.436852 CGTCCGGTTTGAATTCATCGAATT 60.437 41.667 20.47 1.69 43.77 2.17
467 468 4.793216 GTCCGGTTTGAATTCATCGAATTG 59.207 41.667 20.47 9.40 41.56 2.32
468 469 4.457603 TCCGGTTTGAATTCATCGAATTGT 59.542 37.500 20.47 0.00 41.56 2.71
469 470 5.048364 TCCGGTTTGAATTCATCGAATTGTT 60.048 36.000 20.47 0.00 41.56 2.83
470 471 5.060816 CCGGTTTGAATTCATCGAATTGTTG 59.939 40.000 20.47 5.57 41.56 3.33
471 472 5.629020 CGGTTTGAATTCATCGAATTGTTGT 59.371 36.000 9.40 0.00 41.56 3.32
472 473 6.183359 CGGTTTGAATTCATCGAATTGTTGTC 60.183 38.462 9.40 0.00 41.56 3.18
473 474 6.089417 GGTTTGAATTCATCGAATTGTTGTCC 59.911 38.462 9.40 0.00 41.56 4.02
474 475 4.968626 TGAATTCATCGAATTGTTGTCCG 58.031 39.130 3.38 0.00 41.56 4.79
475 476 4.142708 TGAATTCATCGAATTGTTGTCCGG 60.143 41.667 3.38 0.00 41.56 5.14
476 477 2.753055 TCATCGAATTGTTGTCCGGA 57.247 45.000 0.00 0.00 0.00 5.14
477 478 3.260475 TCATCGAATTGTTGTCCGGAT 57.740 42.857 7.81 0.00 0.00 4.18
478 479 2.935849 TCATCGAATTGTTGTCCGGATG 59.064 45.455 7.81 0.00 0.00 3.51
479 480 2.465860 TCGAATTGTTGTCCGGATGT 57.534 45.000 7.81 0.00 0.00 3.06
480 481 3.596310 TCGAATTGTTGTCCGGATGTA 57.404 42.857 7.81 0.00 0.00 2.29
481 482 4.131649 TCGAATTGTTGTCCGGATGTAT 57.868 40.909 7.81 0.00 0.00 2.29
482 483 5.265350 TCGAATTGTTGTCCGGATGTATA 57.735 39.130 7.81 0.00 0.00 1.47
483 484 5.045215 TCGAATTGTTGTCCGGATGTATAC 58.955 41.667 7.81 2.37 0.00 1.47
484 485 4.210537 CGAATTGTTGTCCGGATGTATACC 59.789 45.833 7.81 0.00 0.00 2.73
485 486 4.764050 ATTGTTGTCCGGATGTATACCA 57.236 40.909 7.81 0.00 0.00 3.25
486 487 4.764050 TTGTTGTCCGGATGTATACCAT 57.236 40.909 7.81 0.00 36.13 3.55
502 503 1.429021 CATCAACGTTGGATGGCGG 59.571 57.895 27.02 6.42 38.74 6.13
503 504 2.406616 ATCAACGTTGGATGGCGGC 61.407 57.895 27.02 0.00 0.00 6.53
504 505 4.114997 CAACGTTGGATGGCGGCC 62.115 66.667 20.71 13.32 0.00 6.13
505 506 4.344865 AACGTTGGATGGCGGCCT 62.345 61.111 21.46 5.57 0.00 5.19
506 507 4.778143 ACGTTGGATGGCGGCCTC 62.778 66.667 21.46 14.41 0.00 4.70
518 519 2.124151 GGCCTCCCGCATTCATGT 60.124 61.111 0.00 0.00 40.31 3.21
519 520 2.189499 GGCCTCCCGCATTCATGTC 61.189 63.158 0.00 0.00 40.31 3.06
520 521 2.189499 GCCTCCCGCATTCATGTCC 61.189 63.158 0.00 0.00 37.47 4.02
521 522 1.889105 CCTCCCGCATTCATGTCCG 60.889 63.158 0.00 0.00 0.00 4.79
522 523 1.153369 CTCCCGCATTCATGTCCGT 60.153 57.895 0.00 0.00 0.00 4.69
523 524 1.431488 CTCCCGCATTCATGTCCGTG 61.431 60.000 0.00 0.00 0.00 4.94
524 525 1.449423 CCCGCATTCATGTCCGTGA 60.449 57.895 0.00 0.00 0.00 4.35
525 526 1.024046 CCCGCATTCATGTCCGTGAA 61.024 55.000 4.52 4.52 41.88 3.18
526 527 0.096976 CCGCATTCATGTCCGTGAAC 59.903 55.000 4.16 0.00 40.60 3.18
527 528 1.078709 CGCATTCATGTCCGTGAACT 58.921 50.000 4.16 0.00 40.60 3.01
528 529 1.201954 CGCATTCATGTCCGTGAACTG 60.202 52.381 4.16 5.93 40.60 3.16
529 530 2.076100 GCATTCATGTCCGTGAACTGA 58.924 47.619 4.16 0.00 40.60 3.41
530 531 2.679837 GCATTCATGTCCGTGAACTGAT 59.320 45.455 4.16 0.00 40.60 2.90
531 532 3.242543 GCATTCATGTCCGTGAACTGATC 60.243 47.826 4.16 0.00 40.60 2.92
532 533 2.672961 TCATGTCCGTGAACTGATCC 57.327 50.000 0.00 0.00 0.00 3.36
533 534 1.207089 TCATGTCCGTGAACTGATCCC 59.793 52.381 0.00 0.00 0.00 3.85
534 535 0.541863 ATGTCCGTGAACTGATCCCC 59.458 55.000 0.00 0.00 0.00 4.81
535 536 0.544357 TGTCCGTGAACTGATCCCCT 60.544 55.000 0.00 0.00 0.00 4.79
536 537 0.175989 GTCCGTGAACTGATCCCCTC 59.824 60.000 0.00 0.00 0.00 4.30
537 538 0.252057 TCCGTGAACTGATCCCCTCA 60.252 55.000 0.00 0.00 0.00 3.86
538 539 0.833287 CCGTGAACTGATCCCCTCAT 59.167 55.000 0.00 0.00 32.10 2.90
539 540 1.473965 CCGTGAACTGATCCCCTCATG 60.474 57.143 0.00 0.00 32.10 3.07
540 541 1.208052 CGTGAACTGATCCCCTCATGT 59.792 52.381 0.00 0.00 32.10 3.21
541 542 2.355108 CGTGAACTGATCCCCTCATGTT 60.355 50.000 0.00 0.00 32.10 2.71
542 543 3.274288 GTGAACTGATCCCCTCATGTTC 58.726 50.000 0.00 0.00 39.67 3.18
543 544 2.093500 TGAACTGATCCCCTCATGTTCG 60.093 50.000 0.00 0.00 40.77 3.95
544 545 0.179000 ACTGATCCCCTCATGTTCGC 59.821 55.000 0.00 0.00 32.10 4.70
545 546 0.877649 CTGATCCCCTCATGTTCGCG 60.878 60.000 0.00 0.00 32.10 5.87
546 547 1.326951 TGATCCCCTCATGTTCGCGA 61.327 55.000 3.71 3.71 0.00 5.87
547 548 0.179084 GATCCCCTCATGTTCGCGAA 60.179 55.000 19.38 19.38 0.00 4.70
548 549 0.469917 ATCCCCTCATGTTCGCGAAT 59.530 50.000 26.23 7.03 0.00 3.34
549 550 1.116308 TCCCCTCATGTTCGCGAATA 58.884 50.000 26.23 23.36 0.00 1.75
550 551 1.068588 TCCCCTCATGTTCGCGAATAG 59.931 52.381 26.23 18.32 0.00 1.73
551 552 1.068588 CCCCTCATGTTCGCGAATAGA 59.931 52.381 26.23 20.20 0.00 1.98
552 553 2.289072 CCCCTCATGTTCGCGAATAGAT 60.289 50.000 26.23 14.30 0.00 1.98
553 554 3.056821 CCCCTCATGTTCGCGAATAGATA 60.057 47.826 26.23 10.58 0.00 1.98
554 555 3.921021 CCCTCATGTTCGCGAATAGATAC 59.079 47.826 26.23 12.29 0.00 2.24
555 556 3.604198 CCTCATGTTCGCGAATAGATACG 59.396 47.826 26.23 9.69 0.00 3.06
556 557 3.561503 TCATGTTCGCGAATAGATACGG 58.438 45.455 26.23 8.04 0.00 4.02
557 558 2.410785 TGTTCGCGAATAGATACGGG 57.589 50.000 26.23 0.00 42.22 5.28
558 559 1.001048 TGTTCGCGAATAGATACGGGG 60.001 52.381 26.23 0.00 41.44 5.73
559 560 1.267806 GTTCGCGAATAGATACGGGGA 59.732 52.381 26.23 0.00 41.44 4.81
560 561 1.608055 TCGCGAATAGATACGGGGAA 58.392 50.000 6.20 0.00 41.44 3.97
561 562 1.955778 TCGCGAATAGATACGGGGAAA 59.044 47.619 6.20 0.00 41.44 3.13
562 563 2.559668 TCGCGAATAGATACGGGGAAAT 59.440 45.455 6.20 0.00 41.44 2.17
563 564 3.006110 TCGCGAATAGATACGGGGAAATT 59.994 43.478 6.20 0.00 41.44 1.82
564 565 3.744426 CGCGAATAGATACGGGGAAATTT 59.256 43.478 0.00 0.00 38.44 1.82
565 566 4.925054 CGCGAATAGATACGGGGAAATTTA 59.075 41.667 0.00 0.00 38.44 1.40
566 567 5.164022 CGCGAATAGATACGGGGAAATTTAC 60.164 44.000 0.00 0.00 38.44 2.01
567 568 5.164022 GCGAATAGATACGGGGAAATTTACG 60.164 44.000 7.58 7.58 0.00 3.18
568 569 5.346822 CGAATAGATACGGGGAAATTTACGG 59.653 44.000 12.20 6.43 0.00 4.02
569 570 5.813513 ATAGATACGGGGAAATTTACGGT 57.186 39.130 12.20 10.80 0.00 4.83
570 571 4.492494 AGATACGGGGAAATTTACGGTT 57.508 40.909 12.20 1.95 0.00 4.44
571 572 4.193865 AGATACGGGGAAATTTACGGTTG 58.806 43.478 12.20 0.00 0.00 3.77
572 573 0.883153 ACGGGGAAATTTACGGTTGC 59.117 50.000 12.20 0.00 0.00 4.17
573 574 0.171679 CGGGGAAATTTACGGTTGCC 59.828 55.000 0.00 0.00 34.66 4.52
584 585 2.006772 CGGTTGCCGTTAGAGATGC 58.993 57.895 0.00 0.00 42.73 3.91
585 586 1.429148 CGGTTGCCGTTAGAGATGCC 61.429 60.000 0.00 0.00 42.73 4.40
586 587 1.095807 GGTTGCCGTTAGAGATGCCC 61.096 60.000 0.00 0.00 0.00 5.36
587 588 0.107654 GTTGCCGTTAGAGATGCCCT 60.108 55.000 0.00 0.00 0.00 5.19
588 589 0.107703 TTGCCGTTAGAGATGCCCTG 60.108 55.000 0.00 0.00 0.00 4.45
589 590 0.975556 TGCCGTTAGAGATGCCCTGA 60.976 55.000 0.00 0.00 0.00 3.86
590 591 0.249657 GCCGTTAGAGATGCCCTGAG 60.250 60.000 0.00 0.00 0.00 3.35
591 592 1.403814 CCGTTAGAGATGCCCTGAGA 58.596 55.000 0.00 0.00 0.00 3.27
592 593 1.967066 CCGTTAGAGATGCCCTGAGAT 59.033 52.381 0.00 0.00 0.00 2.75
593 594 3.157881 CCGTTAGAGATGCCCTGAGATA 58.842 50.000 0.00 0.00 0.00 1.98
594 595 3.057174 CCGTTAGAGATGCCCTGAGATAC 60.057 52.174 0.00 0.00 0.00 2.24
595 596 3.057174 CGTTAGAGATGCCCTGAGATACC 60.057 52.174 0.00 0.00 0.00 2.73
596 597 2.783379 AGAGATGCCCTGAGATACCA 57.217 50.000 0.00 0.00 0.00 3.25
597 598 3.272716 AGAGATGCCCTGAGATACCAT 57.727 47.619 0.00 0.00 0.00 3.55
598 599 4.410481 AGAGATGCCCTGAGATACCATA 57.590 45.455 0.00 0.00 0.00 2.74
602 603 2.329267 TGCCCTGAGATACCATACCTG 58.671 52.381 0.00 0.00 0.00 4.00
625 626 4.265056 GTGGCCACCCGAGGTTGT 62.265 66.667 26.31 0.00 31.02 3.32
645 654 3.457560 TCCATCCATCGGACTAGGG 57.542 57.895 0.00 0.00 32.98 3.53
696 705 3.254657 CGATTGATCTCTACCCTCCTCAC 59.745 52.174 0.00 0.00 0.00 3.51
700 712 2.516227 TCTCTACCCTCCTCACACAG 57.484 55.000 0.00 0.00 0.00 3.66
714 726 1.008538 CACAGACAAACCGGCAAGC 60.009 57.895 0.00 0.00 0.00 4.01
717 729 0.517316 CAGACAAACCGGCAAGCTAC 59.483 55.000 0.00 0.00 0.00 3.58
796 808 1.001393 CCCTTTGGCCACACCGTAT 60.001 57.895 3.88 0.00 43.94 3.06
797 809 0.253610 CCCTTTGGCCACACCGTATA 59.746 55.000 3.88 0.00 43.94 1.47
809 821 5.919141 GCCACACCGTATAACAAGATACTAG 59.081 44.000 0.00 0.00 31.24 2.57
837 849 5.929697 TTAGCTGACAAAGTGATGACAAG 57.070 39.130 0.00 0.00 0.00 3.16
877 889 1.246056 TACAAGTGGTCGACCGAGGG 61.246 60.000 28.70 19.94 39.43 4.30
916 928 4.487412 GTGGGGACGACGCTACGG 62.487 72.222 2.77 0.00 37.61 4.02
946 958 2.035321 GAGTAGCGCTAGGAGCAAGATT 59.965 50.000 19.48 0.00 42.58 2.40
947 959 2.131183 GTAGCGCTAGGAGCAAGATTG 58.869 52.381 19.48 0.00 42.58 2.67
948 960 0.539051 AGCGCTAGGAGCAAGATTGT 59.461 50.000 8.99 0.00 42.58 2.71
949 961 0.933796 GCGCTAGGAGCAAGATTGTC 59.066 55.000 0.00 0.00 42.58 3.18
1010 1022 2.071844 TAGGTTAGCAGCCTAGCGCG 62.072 60.000 0.00 0.00 44.76 6.86
1028 1041 1.609208 CGGCCATCCCTATTTGAAGG 58.391 55.000 2.24 0.00 36.30 3.46
1035 1048 1.557832 TCCCTATTTGAAGGTCGGGTG 59.442 52.381 0.00 0.00 34.56 4.61
1036 1049 1.557832 CCCTATTTGAAGGTCGGGTGA 59.442 52.381 0.00 0.00 34.56 4.02
1051 1064 4.648651 TCGGGTGAGAGATCGACATATAA 58.351 43.478 0.00 0.00 0.00 0.98
1092 1105 4.857871 CACGAAGAGTGTAGAGAGAGAG 57.142 50.000 0.00 0.00 45.51 3.20
1093 1106 4.500127 CACGAAGAGTGTAGAGAGAGAGA 58.500 47.826 0.00 0.00 45.51 3.10
1094 1107 4.566759 CACGAAGAGTGTAGAGAGAGAGAG 59.433 50.000 0.00 0.00 45.51 3.20
1095 1108 4.464951 ACGAAGAGTGTAGAGAGAGAGAGA 59.535 45.833 0.00 0.00 0.00 3.10
1096 1109 5.043903 CGAAGAGTGTAGAGAGAGAGAGAG 58.956 50.000 0.00 0.00 0.00 3.20
1121 1136 1.336755 GCTAGCTACAGAGTGAGCCTC 59.663 57.143 7.70 0.00 39.65 4.70
1344 1368 1.064654 GATTGCTTCGGTTCATCCAGC 59.935 52.381 0.00 0.00 36.24 4.85
1345 1369 0.036732 TTGCTTCGGTTCATCCAGCT 59.963 50.000 0.00 0.00 36.54 4.24
1346 1370 0.674581 TGCTTCGGTTCATCCAGCTG 60.675 55.000 6.78 6.78 36.54 4.24
1365 1389 3.391965 CTGCTAGCTGATCCATCTCAAC 58.608 50.000 17.23 0.00 0.00 3.18
1383 1407 3.138839 TCAACATCATAGGCCATGGATGT 59.861 43.478 22.85 22.85 37.17 3.06
1412 1436 4.070716 GGGCTGATCCATATTTGTCTGAG 58.929 47.826 0.00 0.00 36.21 3.35
1656 1681 4.878774 GCTCCGCCATCTATCTCG 57.121 61.111 0.00 0.00 0.00 4.04
1671 1759 7.926555 CCATCTATCTCGTGGTAATTAACAACT 59.073 37.037 4.38 0.00 28.71 3.16
1681 1769 7.463648 CGTGGTAATTAACAACTCGTTCCTATG 60.464 40.741 4.38 0.00 39.14 2.23
1691 1779 2.166459 CTCGTTCCTATGCTTCACCTCA 59.834 50.000 0.00 0.00 0.00 3.86
1715 1818 6.363577 TGGTAACTTTCGTAGATACGTAGG 57.636 41.667 11.77 6.03 43.85 3.18
1828 1933 3.852578 AGAGTTGGATGGGGATTTGTACT 59.147 43.478 0.00 0.00 0.00 2.73
1901 3527 2.154427 GAGGCACAAAACGTCCGTCG 62.154 60.000 0.00 0.00 46.00 5.12
1921 3547 0.725784 GTGTCGCGCCACAGAAAATG 60.726 55.000 16.40 0.00 35.38 2.32
1922 3548 0.882484 TGTCGCGCCACAGAAAATGA 60.882 50.000 2.90 0.00 0.00 2.57
1923 3549 0.179215 GTCGCGCCACAGAAAATGAG 60.179 55.000 0.00 0.00 0.00 2.90
1924 3550 0.320334 TCGCGCCACAGAAAATGAGA 60.320 50.000 0.00 0.00 0.00 3.27
1925 3551 0.516877 CGCGCCACAGAAAATGAGAA 59.483 50.000 0.00 0.00 0.00 2.87
1926 3552 1.069296 CGCGCCACAGAAAATGAGAAA 60.069 47.619 0.00 0.00 0.00 2.52
1927 3553 2.604373 CGCGCCACAGAAAATGAGAAAA 60.604 45.455 0.00 0.00 0.00 2.29
1928 3554 3.578688 GCGCCACAGAAAATGAGAAAAT 58.421 40.909 0.00 0.00 0.00 1.82
1986 3612 5.736813 ATACTAGAGCTAGCTGCGTAGTAT 58.263 41.667 27.11 27.11 44.58 2.12
1987 3613 5.583061 ATACTAGAGCTAGCTGCGTAGTATG 59.417 44.000 29.41 13.65 46.08 2.39
1988 3614 6.798057 ATACTAGAGCTAGCTGCGTAGTATGT 60.798 42.308 29.41 18.56 46.08 2.29
1989 3615 7.579146 ATACTAGAGCTAGCTGCGTAGTATGTA 60.579 40.741 29.41 17.61 46.08 2.29
1991 3617 3.204597 GCTAGCTGCGTAGTATGTAGG 57.795 52.381 7.70 0.00 0.00 3.18
1992 3618 2.095161 GCTAGCTGCGTAGTATGTAGGG 60.095 54.545 7.70 0.00 0.00 3.53
1993 3619 0.674534 AGCTGCGTAGTATGTAGGGC 59.325 55.000 9.23 0.00 0.00 5.19
1994 3620 0.387929 GCTGCGTAGTATGTAGGGCA 59.612 55.000 9.23 0.00 0.00 5.36
1995 3621 2.423926 CTGCGTAGTATGTAGGGCAG 57.576 55.000 0.00 0.00 41.42 4.85
1998 3624 1.000496 GCGTAGTATGTAGGGCAGTCC 60.000 57.143 0.00 0.00 0.00 3.85
2008 3636 4.025360 TGTAGGGCAGTCCGTAGAAAATA 58.975 43.478 0.00 0.00 41.52 1.40
2017 3645 7.819900 GGCAGTCCGTAGAAAATATCTATCATT 59.180 37.037 0.00 0.00 42.51 2.57
2021 3666 9.930693 GTCCGTAGAAAATATCTATCATTTCCT 57.069 33.333 0.00 0.00 42.51 3.36
2037 3682 7.131907 TCATTTCCTTCTGTCCGGATTTATA 57.868 36.000 7.81 0.00 0.00 0.98
2137 3786 8.902040 ATATCATCGAAAAGCTCTTTCAAAAC 57.098 30.769 16.39 0.00 31.45 2.43
2138 3787 6.130298 TCATCGAAAAGCTCTTTCAAAACA 57.870 33.333 16.39 2.00 31.45 2.83
2141 3790 7.706179 TCATCGAAAAGCTCTTTCAAAACAAAT 59.294 29.630 16.39 2.35 31.45 2.32
2142 3791 8.967218 CATCGAAAAGCTCTTTCAAAACAAATA 58.033 29.630 16.39 0.00 31.45 1.40
2217 3871 5.703130 ACTCTCAAAGTCTGGCTCAAAATAC 59.297 40.000 0.00 0.00 30.02 1.89
2297 3966 1.153549 CTAGCTGCCTGGTTCGGAC 60.154 63.158 0.00 0.00 0.00 4.79
2300 3969 3.059982 CTGCCTGGTTCGGACTGA 58.940 61.111 0.00 0.00 0.00 3.41
2350 4019 2.002586 AGTACGCATGTGCAGATGAAC 58.997 47.619 26.71 18.92 42.21 3.18
2415 4086 2.108157 GGCGTATGGTCGGATGCA 59.892 61.111 0.00 0.00 0.00 3.96
2440 4111 3.088532 GAGATCGGGCTGAGATGTCTAT 58.911 50.000 1.04 0.00 36.04 1.98
2443 4114 1.957177 TCGGGCTGAGATGTCTATCAC 59.043 52.381 0.00 0.00 35.70 3.06
2444 4115 1.959985 CGGGCTGAGATGTCTATCACT 59.040 52.381 0.00 0.00 35.70 3.41
2454 4125 6.211384 TGAGATGTCTATCACTTTGTCTTGGA 59.789 38.462 0.00 0.00 35.70 3.53
2467 4143 2.289631 TGTCTTGGACCTCGACGTACTA 60.290 50.000 0.00 0.00 0.00 1.82
2482 4158 2.287373 CGTACTAGTCCAGATCGTGACC 59.713 54.545 0.00 0.00 31.76 4.02
2524 4200 1.707451 TCGATTTCGACGTGCATGC 59.293 52.632 11.82 11.82 44.22 4.06
2525 4201 1.645236 CGATTTCGACGTGCATGCG 60.645 57.895 14.09 10.89 43.02 4.73
2526 4202 1.296867 GATTTCGACGTGCATGCGG 60.297 57.895 14.09 10.18 35.98 5.69
2527 4203 1.966493 GATTTCGACGTGCATGCGGT 61.966 55.000 14.09 13.67 35.98 5.68
2547 4223 4.454161 CGGTCATATTTGTTGACTCCACAA 59.546 41.667 4.07 0.00 42.48 3.33
2560 4249 7.834681 TGTTGACTCCACAATCTATAGAGTACT 59.165 37.037 8.70 0.00 37.90 2.73
2587 4276 0.806868 TGGACTACACGATCGACCAC 59.193 55.000 24.34 7.58 0.00 4.16
2684 4381 1.733360 CGACCCTATCGTCTAGCTAGC 59.267 57.143 16.35 6.62 46.25 3.42
2685 4382 2.780714 GACCCTATCGTCTAGCTAGCA 58.219 52.381 18.83 2.69 0.00 3.49
2690 4387 3.936453 CCTATCGTCTAGCTAGCACTAGG 59.064 52.174 18.83 16.75 40.13 3.02
2694 4391 3.640498 TCGTCTAGCTAGCACTAGGAGTA 59.360 47.826 18.83 0.00 40.13 2.59
2702 4399 3.465742 AGCACTAGGAGTACATGCATG 57.534 47.619 25.09 25.09 38.79 4.06
2703 4400 1.869767 GCACTAGGAGTACATGCATGC 59.130 52.381 26.53 11.82 36.30 4.06
2704 4401 2.742856 GCACTAGGAGTACATGCATGCA 60.743 50.000 26.53 25.04 36.30 3.96
2741 4438 0.656205 GCACGTGCACGGTAAGTTTG 60.656 55.000 39.21 27.33 44.95 2.93
2742 4439 0.931702 CACGTGCACGGTAAGTTTGA 59.068 50.000 39.21 0.00 44.95 2.69
2743 4440 0.932399 ACGTGCACGGTAAGTTTGAC 59.068 50.000 39.21 0.00 44.95 3.18
2745 4442 0.589708 GTGCACGGTAAGTTTGACCC 59.410 55.000 0.00 0.00 32.95 4.46
2746 4443 0.535553 TGCACGGTAAGTTTGACCCC 60.536 55.000 0.00 0.00 32.95 4.95
2754 4475 1.705997 AAGTTTGACCCCCACGCTCT 61.706 55.000 0.00 0.00 0.00 4.09
2779 4500 1.730501 CATGCACGAGATTCTGTGGT 58.269 50.000 14.14 0.00 36.61 4.16
2793 4514 2.826128 TCTGTGGTCTCTACATGTCACC 59.174 50.000 0.00 5.43 0.00 4.02
2837 4558 3.727376 CGGCAGCAAAACAAAAACAAAGG 60.727 43.478 0.00 0.00 0.00 3.11
2900 4621 2.550978 CGTGATGTACCACTTCATCCC 58.449 52.381 0.00 0.00 39.47 3.85
2902 4623 3.535561 GTGATGTACCACTTCATCCCAG 58.464 50.000 0.00 0.00 39.47 4.45
2924 4648 3.840890 TTTATGTACGTACGTTCGGGT 57.159 42.857 27.92 13.42 34.94 5.28
2925 4649 3.398954 TTATGTACGTACGTTCGGGTC 57.601 47.619 27.92 10.61 34.94 4.46
2963 4687 1.127951 GACCATTAAAGTGTCGCGGTG 59.872 52.381 6.13 0.00 0.00 4.94
2964 4688 1.270412 ACCATTAAAGTGTCGCGGTGA 60.270 47.619 6.13 0.00 0.00 4.02
2965 4689 1.801771 CCATTAAAGTGTCGCGGTGAA 59.198 47.619 6.13 0.00 0.00 3.18
2966 4690 2.159707 CCATTAAAGTGTCGCGGTGAAG 60.160 50.000 6.13 0.00 0.00 3.02
2979 4703 0.320771 GGTGAAGAGTGGTGCGTGAT 60.321 55.000 0.00 0.00 0.00 3.06
2980 4704 0.792640 GTGAAGAGTGGTGCGTGATG 59.207 55.000 0.00 0.00 0.00 3.07
2982 4706 0.671781 GAAGAGTGGTGCGTGATGCT 60.672 55.000 0.00 0.00 46.63 3.79
2992 4716 1.733041 CGTGATGCTGACCGTTCGT 60.733 57.895 0.00 0.00 0.00 3.85
3004 4728 1.076332 CCGTTCGTTCCAGATCAACC 58.924 55.000 0.00 0.00 0.00 3.77
3005 4729 1.606994 CCGTTCGTTCCAGATCAACCA 60.607 52.381 0.00 0.00 0.00 3.67
3015 4739 4.894784 TCCAGATCAACCAGTACAGAAAC 58.105 43.478 0.00 0.00 0.00 2.78
3020 4744 7.255590 CCAGATCAACCAGTACAGAAACATTTT 60.256 37.037 0.00 0.00 0.00 1.82
3021 4745 7.805071 CAGATCAACCAGTACAGAAACATTTTC 59.195 37.037 0.00 0.00 0.00 2.29
3024 4748 6.826231 TCAACCAGTACAGAAACATTTTCAGA 59.174 34.615 0.00 0.00 0.00 3.27
3025 4749 6.619801 ACCAGTACAGAAACATTTTCAGAC 57.380 37.500 0.00 0.00 0.00 3.51
3026 4750 5.236478 ACCAGTACAGAAACATTTTCAGACG 59.764 40.000 0.00 0.00 0.00 4.18
3028 4752 6.238374 CCAGTACAGAAACATTTTCAGACGTT 60.238 38.462 0.00 0.00 0.00 3.99
3029 4753 6.628856 CAGTACAGAAACATTTTCAGACGTTG 59.371 38.462 0.00 0.00 0.00 4.10
3031 4755 6.189677 ACAGAAACATTTTCAGACGTTGAA 57.810 33.333 8.47 8.47 43.92 2.69
3032 4756 6.795399 ACAGAAACATTTTCAGACGTTGAAT 58.205 32.000 11.98 0.11 44.90 2.57
3057 7807 4.369182 CCACCAAGTGAATACGGTAGATC 58.631 47.826 0.00 0.00 35.23 2.75
3059 7809 5.282510 CACCAAGTGAATACGGTAGATCTC 58.717 45.833 0.00 0.00 35.23 2.75
3092 7842 4.476297 TGGAGAGGGACATACGCTATTAA 58.524 43.478 0.00 0.00 41.84 1.40
3093 7843 5.084519 TGGAGAGGGACATACGCTATTAAT 58.915 41.667 0.00 0.00 41.84 1.40
3094 7844 5.542635 TGGAGAGGGACATACGCTATTAATT 59.457 40.000 0.00 0.00 41.84 1.40
3095 7845 6.722590 TGGAGAGGGACATACGCTATTAATTA 59.277 38.462 0.00 0.00 41.84 1.40
3096 7846 7.399191 TGGAGAGGGACATACGCTATTAATTAT 59.601 37.037 0.00 0.00 41.84 1.28
3097 7847 7.921745 GGAGAGGGACATACGCTATTAATTATC 59.078 40.741 0.00 0.00 41.84 1.75
3098 7848 8.362464 AGAGGGACATACGCTATTAATTATCA 57.638 34.615 0.00 0.00 41.84 2.15
3099 7849 8.251721 AGAGGGACATACGCTATTAATTATCAC 58.748 37.037 0.00 0.00 41.84 3.06
3100 7850 7.903145 AGGGACATACGCTATTAATTATCACA 58.097 34.615 0.00 0.00 40.01 3.58
3101 7851 8.035394 AGGGACATACGCTATTAATTATCACAG 58.965 37.037 0.00 0.00 40.01 3.66
3144 7894 8.116026 AGTGGAATAATTGTGGTAGAATTTCCT 58.884 33.333 0.00 0.00 0.00 3.36
3155 7911 9.137459 TGTGGTAGAATTTCCTTTTATTGTTCA 57.863 29.630 0.00 0.00 0.00 3.18
3193 7953 6.299023 TGTATGCATGTAAGCTAATTTCCG 57.701 37.500 10.16 0.00 34.99 4.30
3199 7959 2.745281 TGTAAGCTAATTTCCGTGCACC 59.255 45.455 12.15 0.00 0.00 5.01
3355 8119 0.966875 ATGTGCCACAATGGTCGCAT 60.967 50.000 0.00 10.56 43.03 4.73
3393 8157 5.707298 CCATCACATAGGACAAGAAACTTGT 59.293 40.000 15.46 15.46 34.97 3.16
3411 8175 9.959749 GAAACTTGTTTTGTAATCAACTATGGA 57.040 29.630 0.06 0.00 32.93 3.41
3435 8199 7.167468 GGATAACACGTCCAATTGCATATTTTC 59.833 37.037 0.00 0.00 35.76 2.29
3438 8202 5.863397 ACACGTCCAATTGCATATTTTCTTG 59.137 36.000 0.00 0.00 0.00 3.02
3439 8203 5.289193 CACGTCCAATTGCATATTTTCTTGG 59.711 40.000 0.00 0.00 35.54 3.61
3440 8204 5.047377 ACGTCCAATTGCATATTTTCTTGGT 60.047 36.000 0.00 0.00 35.68 3.67
3441 8205 5.516339 CGTCCAATTGCATATTTTCTTGGTC 59.484 40.000 0.00 0.00 35.68 4.02
3442 8206 6.625740 CGTCCAATTGCATATTTTCTTGGTCT 60.626 38.462 0.00 0.00 35.68 3.85
3443 8207 7.099120 GTCCAATTGCATATTTTCTTGGTCTT 58.901 34.615 0.00 0.00 35.68 3.01
3444 8208 7.603784 GTCCAATTGCATATTTTCTTGGTCTTT 59.396 33.333 0.00 0.00 35.68 2.52
3446 8210 8.785946 CCAATTGCATATTTTCTTGGTCTTTTT 58.214 29.630 0.00 0.00 0.00 1.94
3451 8215 7.598493 TGCATATTTTCTTGGTCTTTTTAGCAC 59.402 33.333 0.00 0.00 0.00 4.40
3452 8216 7.201350 GCATATTTTCTTGGTCTTTTTAGCACG 60.201 37.037 0.00 0.00 0.00 5.34
3453 8217 5.821516 TTTTCTTGGTCTTTTTAGCACGA 57.178 34.783 0.00 0.00 0.00 4.35
3455 8219 7.499321 TTTTCTTGGTCTTTTTAGCACGATA 57.501 32.000 0.00 0.00 0.00 2.92
3456 8220 6.476243 TTCTTGGTCTTTTTAGCACGATAC 57.524 37.500 0.00 0.00 0.00 2.24
3458 8222 5.992829 TCTTGGTCTTTTTAGCACGATACAA 59.007 36.000 0.00 0.00 0.00 2.41
3461 8225 5.077424 GGTCTTTTTAGCACGATACAAACG 58.923 41.667 0.00 0.00 0.00 3.60
3462 8226 4.548457 GTCTTTTTAGCACGATACAAACGC 59.452 41.667 0.00 0.00 0.00 4.84
3463 8227 4.211584 TCTTTTTAGCACGATACAAACGCA 59.788 37.500 0.00 0.00 0.00 5.24
3464 8228 4.469625 TTTTAGCACGATACAAACGCAA 57.530 36.364 0.00 0.00 0.00 4.85
3489 8253 7.265673 AGTTCTAATACACGCATACACTCATT 58.734 34.615 0.00 0.00 0.00 2.57
3494 8258 3.782046 ACACGCATACACTCATTCCTAC 58.218 45.455 0.00 0.00 0.00 3.18
3495 8259 2.789339 CACGCATACACTCATTCCTACG 59.211 50.000 0.00 0.00 0.00 3.51
3510 8276 1.726791 CCTACGAAGACACACACATGC 59.273 52.381 0.00 0.00 0.00 4.06
3523 8289 2.409715 CACACATGCACACTCTACTTCG 59.590 50.000 0.00 0.00 0.00 3.79
3539 8305 2.766263 ACTTCGATGAGCACCTCCAATA 59.234 45.455 5.16 0.00 0.00 1.90
3540 8306 3.389329 ACTTCGATGAGCACCTCCAATAT 59.611 43.478 5.16 0.00 0.00 1.28
3543 8311 3.258372 TCGATGAGCACCTCCAATATACC 59.742 47.826 0.00 0.00 0.00 2.73
3564 8332 3.001838 CCGAGACGACACAACATTTTGAA 59.998 43.478 0.00 0.00 36.48 2.69
3574 8343 8.326713 CGACACAACATTTTGAAATTGATGAAA 58.673 29.630 14.22 0.00 36.48 2.69
3587 8356 5.607939 ATTGATGAAATGACCACATGCAT 57.392 34.783 0.00 0.00 36.79 3.96
3624 8393 6.292168 CGAAAATGTCTACTCTCACAAAACGT 60.292 38.462 0.00 0.00 0.00 3.99
3640 8410 2.435938 GTCATCGCCGGAAAGCCA 60.436 61.111 5.05 0.00 0.00 4.75
3642 8412 1.745115 TCATCGCCGGAAAGCCAAG 60.745 57.895 5.05 0.00 0.00 3.61
3646 8416 1.024579 TCGCCGGAAAGCCAAGAATC 61.025 55.000 5.05 0.00 0.00 2.52
3652 8422 2.677836 CGGAAAGCCAAGAATCGATCAA 59.322 45.455 0.00 0.00 0.00 2.57
3687 8462 8.175716 CGAGTATCAAGTTTAGGATTTGAAACC 58.824 37.037 0.00 0.00 34.80 3.27
3720 8518 2.407090 TGAGCTATGATCAATTCGCGG 58.593 47.619 6.13 0.00 0.00 6.46
3813 8611 2.353269 TGGCGATTATTAGCAACCAACG 59.647 45.455 0.00 0.00 34.54 4.10
3901 8699 9.411848 ACCCTAATTAATCTTCTTATCCTGGAT 57.588 33.333 14.66 14.66 0.00 3.41
3910 8708 2.909006 TCTTATCCTGGATCATCTGCCC 59.091 50.000 13.54 0.00 0.00 5.36
4068 8931 5.007385 TCCATCTACTTTAGAAACGAGGC 57.993 43.478 0.00 0.00 38.50 4.70
4070 8933 4.806247 CCATCTACTTTAGAAACGAGGCAG 59.194 45.833 0.00 0.00 38.50 4.85
4103 8966 0.518636 GCTCAATTGCTCTTGTGCGA 59.481 50.000 0.00 0.00 36.34 5.10
4146 9011 5.585047 ACCGTAGCAACTTCATTAATCCTTC 59.415 40.000 0.00 0.00 0.00 3.46
4231 9102 6.697455 CGGATCATAAGTCGAGAGATTTGAAA 59.303 38.462 0.00 0.00 45.19 2.69
4233 9104 6.893958 TCATAAGTCGAGAGATTTGAAAGC 57.106 37.500 0.00 0.00 45.19 3.51
4234 9105 6.634805 TCATAAGTCGAGAGATTTGAAAGCT 58.365 36.000 0.00 0.00 45.19 3.74
4478 9591 1.221414 GGCTGTACATCATCGCCTTC 58.779 55.000 14.19 0.00 35.38 3.46
4877 10030 3.000925 CGTACACGAAGAAGCACAAGTTT 59.999 43.478 0.00 0.00 43.02 2.66
5003 10171 1.248785 CGGAGGTGGAGGAGACGAAA 61.249 60.000 0.00 0.00 0.00 3.46
5010 10178 1.825474 TGGAGGAGACGAAACAGATCC 59.175 52.381 0.00 0.00 0.00 3.36
5118 10286 3.286694 ATGAACCGGCACATGGGCT 62.287 57.895 21.47 0.00 40.61 5.19
5423 10591 3.895025 CAGTTCGTGCTGATGGGG 58.105 61.111 3.54 0.00 38.70 4.96
5741 10912 2.086426 CACGGACACCATCGACGTG 61.086 63.158 11.85 11.85 46.82 4.49
5815 10987 5.161358 GCCAATGGCTTAGTTAAACACTTC 58.839 41.667 18.47 0.00 46.69 3.01
5822 11006 6.183360 TGGCTTAGTTAAACACTTCCTTGTTG 60.183 38.462 0.00 0.00 39.70 3.33
5825 11009 8.068380 GCTTAGTTAAACACTTCCTTGTTGTAG 58.932 37.037 0.00 0.00 39.70 2.74
5836 11020 8.870879 CACTTCCTTGTTGTAGTAGTATAAAGC 58.129 37.037 0.00 0.00 0.00 3.51
5843 11027 6.588756 TGTTGTAGTAGTATAAAGCACTGCAC 59.411 38.462 3.30 0.00 34.10 4.57
5844 11028 6.275494 TGTAGTAGTATAAAGCACTGCACA 57.725 37.500 3.30 0.00 30.19 4.57
5848 11032 9.309516 GTAGTAGTATAAAGCACTGCACAATTA 57.690 33.333 3.30 0.00 31.75 1.40
5850 11034 6.106877 AGTATAAAGCACTGCACAATTACG 57.893 37.500 3.30 0.00 0.00 3.18
5851 11035 5.642063 AGTATAAAGCACTGCACAATTACGT 59.358 36.000 3.30 0.00 0.00 3.57
5852 11036 6.814644 AGTATAAAGCACTGCACAATTACGTA 59.185 34.615 3.30 0.00 0.00 3.57
5853 11037 3.806316 AAGCACTGCACAATTACGTAC 57.194 42.857 3.30 0.00 0.00 3.67
5856 11040 3.751175 AGCACTGCACAATTACGTACAAT 59.249 39.130 3.30 0.00 0.00 2.71
5857 11041 4.215399 AGCACTGCACAATTACGTACAATT 59.785 37.500 3.30 0.00 0.00 2.32
5858 11042 4.915085 GCACTGCACAATTACGTACAATTT 59.085 37.500 0.00 0.00 0.00 1.82
5860 11044 6.579292 GCACTGCACAATTACGTACAATTTTA 59.421 34.615 0.00 0.00 0.00 1.52
5862 11046 7.060174 CACTGCACAATTACGTACAATTTTACC 59.940 37.037 0.00 0.00 0.00 2.85
5863 11047 6.967135 TGCACAATTACGTACAATTTTACCA 58.033 32.000 0.00 0.00 0.00 3.25
5865 11049 8.727910 TGCACAATTACGTACAATTTTACCATA 58.272 29.630 0.00 0.00 0.00 2.74
5866 11050 9.557338 GCACAATTACGTACAATTTTACCATAA 57.443 29.630 0.00 0.00 0.00 1.90
5908 11472 4.037208 GCTATAGCTACGACCTGTTGGTAA 59.963 45.833 17.75 0.00 41.80 2.85
5909 11473 6.015458 GCTATAGCTACGACCTGTTGGTAAC 61.015 48.000 17.75 0.00 41.80 2.50
5910 11474 8.871090 GCTATAGCTACGACCTGTTGGTAACC 62.871 50.000 17.75 0.00 41.80 2.85
5916 11480 1.909700 ACCTGTTGGTAACCAGCATG 58.090 50.000 0.00 0.00 46.43 4.06
5917 11481 0.527565 CCTGTTGGTAACCAGCATGC 59.472 55.000 10.51 10.51 43.37 4.06
5918 11482 1.246649 CTGTTGGTAACCAGCATGCA 58.753 50.000 21.98 0.00 43.37 3.96
5919 11483 1.200716 CTGTTGGTAACCAGCATGCAG 59.799 52.381 21.98 12.49 43.37 4.41
5920 11484 0.109132 GTTGGTAACCAGCATGCAGC 60.109 55.000 21.98 8.89 46.19 5.25
5938 11509 1.375523 CCCCTTCCGTTCCGACAAG 60.376 63.158 0.00 0.00 0.00 3.16
5939 11510 1.375523 CCCTTCCGTTCCGACAAGG 60.376 63.158 7.13 7.13 42.97 3.61
5985 11560 2.048597 GGACGCACACACGGATCA 60.049 61.111 0.00 0.00 37.37 2.92
5991 11566 1.009829 GCACACACGGATCAATCTCC 58.990 55.000 0.00 0.00 0.00 3.71
6003 11578 5.508153 CGGATCAATCTCCCGTCCATATATC 60.508 48.000 0.00 0.00 38.55 1.63
6013 11590 3.193691 CCGTCCATATATCCCTCACTGAC 59.806 52.174 0.00 0.00 0.00 3.51
6014 11591 3.193691 CGTCCATATATCCCTCACTGACC 59.806 52.174 0.00 0.00 0.00 4.02
6017 11594 4.610703 TCCATATATCCCTCACTGACCCTA 59.389 45.833 0.00 0.00 0.00 3.53
6019 11596 2.359981 TATCCCTCACTGACCCTACG 57.640 55.000 0.00 0.00 0.00 3.51
6027 11604 1.134788 CACTGACCCTACGATCCCAAC 60.135 57.143 0.00 0.00 0.00 3.77
6062 11639 0.320247 ATTCCGCCATCGATCTCTGC 60.320 55.000 0.00 0.00 38.10 4.26
6067 11644 1.006805 CCATCGATCTCTGCCGTCC 60.007 63.158 0.00 0.00 0.00 4.79
6073 11650 0.033228 GATCTCTGCCGTCCATGGAG 59.967 60.000 16.81 5.54 0.00 3.86
6085 11662 2.066393 CATGGAGGGAGCTTCCGGA 61.066 63.158 5.05 0.00 37.43 5.14
6143 11733 1.737008 GAGTTCGACGGCCTGTTCC 60.737 63.158 0.00 0.00 0.00 3.62
6186 11776 2.430921 CGAGGCGAGACAGCGTTT 60.431 61.111 0.00 0.00 38.18 3.60
6187 11777 2.437343 CGAGGCGAGACAGCGTTTC 61.437 63.158 0.00 0.00 38.18 2.78
6208 11798 1.815003 CATCGCGGTCCTGCATCAA 60.815 57.895 6.13 0.00 34.15 2.57
6222 11812 1.478510 GCATCAAGACGAGGAGGAGAA 59.521 52.381 0.00 0.00 0.00 2.87
6223 11813 2.737039 GCATCAAGACGAGGAGGAGAAC 60.737 54.545 0.00 0.00 0.00 3.01
6232 11822 0.692419 AGGAGGAGAACCGCATCCAT 60.692 55.000 4.42 0.00 41.83 3.41
6243 11833 3.151906 CATCCATCCTCCCCGACC 58.848 66.667 0.00 0.00 0.00 4.79
6244 11834 1.460305 CATCCATCCTCCCCGACCT 60.460 63.158 0.00 0.00 0.00 3.85
6293 11886 2.989639 CCATCAAGGACCCGAGCA 59.010 61.111 0.00 0.00 41.22 4.26
6321 11914 2.989639 CCATGGCTCCAAGTCCGA 59.010 61.111 0.00 0.00 0.00 4.55
6322 11915 1.450312 CCATGGCTCCAAGTCCGAC 60.450 63.158 0.00 0.00 0.00 4.79
6323 11916 1.811266 CATGGCTCCAAGTCCGACG 60.811 63.158 0.00 0.00 0.00 5.12
6356 11949 0.105760 ACCAGGCCCACAATTTGACA 60.106 50.000 0.00 0.00 0.00 3.58
6401 13539 3.233355 ACAAGGAGCGGATTGTCAC 57.767 52.632 0.00 0.00 34.62 3.67
6423 14294 3.937706 CCGAGTCAAGATCAAAGAAGCAT 59.062 43.478 0.00 0.00 0.00 3.79
6438 14309 6.551385 AAGAAGCATAGAAGACAAAGTGTG 57.449 37.500 0.00 0.00 0.00 3.82
6451 20148 5.854010 ACAAAGTGTGTCAAGACTAGAGA 57.146 39.130 0.00 0.00 34.38 3.10
6463 20160 7.450014 TGTCAAGACTAGAGAGAGAGATTGTTT 59.550 37.037 0.00 0.00 0.00 2.83
6536 20243 3.552273 GCAAGTTGGAGAGTCTACGTTGA 60.552 47.826 13.55 0.00 0.00 3.18
6563 20270 0.465460 TTTGCAAGTTGAGTCCGGCT 60.465 50.000 7.16 0.00 0.00 5.52
6565 20272 0.394938 TGCAAGTTGAGTCCGGCTTA 59.605 50.000 7.16 0.00 0.00 3.09
6566 20273 1.079503 GCAAGTTGAGTCCGGCTTAG 58.920 55.000 7.16 0.00 0.00 2.18
6576 20283 1.745489 CCGGCTTAGGAGTTGCACC 60.745 63.158 0.00 0.00 0.00 5.01
6588 20295 0.589708 GTTGCACCGGGTCTGTTTAC 59.410 55.000 6.32 0.00 0.00 2.01
6636 20373 6.637658 GCTGGATTAGAAGTCGTATACAAGTC 59.362 42.308 3.32 0.00 0.00 3.01
6637 20374 7.468906 GCTGGATTAGAAGTCGTATACAAGTCT 60.469 40.741 3.32 2.64 0.00 3.24
6639 20376 8.834465 TGGATTAGAAGTCGTATACAAGTCTAC 58.166 37.037 3.32 0.00 0.00 2.59
6640 20377 8.008844 GGATTAGAAGTCGTATACAAGTCTACG 58.991 40.741 10.68 10.68 41.49 3.51
6641 20378 7.834068 TTAGAAGTCGTATACAAGTCTACGT 57.166 36.000 14.84 0.00 41.05 3.57
6642 20379 6.734104 AGAAGTCGTATACAAGTCTACGTT 57.266 37.500 14.84 6.08 41.05 3.99
6643 20380 6.541086 AGAAGTCGTATACAAGTCTACGTTG 58.459 40.000 14.84 0.00 41.05 4.10
6644 20381 6.369890 AGAAGTCGTATACAAGTCTACGTTGA 59.630 38.462 14.84 0.00 41.05 3.18
6645 20382 6.486253 AGTCGTATACAAGTCTACGTTGAA 57.514 37.500 14.84 0.00 41.05 2.69
6647 20384 6.148480 AGTCGTATACAAGTCTACGTTGAAGT 59.852 38.462 14.84 4.02 41.05 3.01
6648 20385 6.464204 GTCGTATACAAGTCTACGTTGAAGTC 59.536 42.308 14.84 0.00 41.05 3.01
6649 20386 5.447214 CGTATACAAGTCTACGTTGAAGTCG 59.553 44.000 0.07 0.00 36.77 4.18
6650 20387 3.705043 ACAAGTCTACGTTGAAGTCGT 57.295 42.857 0.07 0.00 43.86 4.34
6651 20388 4.818534 ACAAGTCTACGTTGAAGTCGTA 57.181 40.909 0.07 0.00 41.72 3.43
6652 20389 5.368256 ACAAGTCTACGTTGAAGTCGTAT 57.632 39.130 0.07 0.00 41.69 3.06
6653 20390 6.486253 ACAAGTCTACGTTGAAGTCGTATA 57.514 37.500 0.07 0.00 41.69 1.47
6654 20391 6.310197 ACAAGTCTACGTTGAAGTCGTATAC 58.690 40.000 0.07 0.00 41.69 1.47
6655 20392 6.073058 ACAAGTCTACGTTGAAGTCGTATACA 60.073 38.462 0.07 0.00 40.60 2.29
6695 20432 7.326789 ACATTTCTCAATTTTGTTGTAGATGCG 59.673 33.333 0.00 0.00 0.00 4.73
6697 20434 4.759693 TCTCAATTTTGTTGTAGATGCGGT 59.240 37.500 0.00 0.00 0.00 5.68
6698 20435 5.240623 TCTCAATTTTGTTGTAGATGCGGTT 59.759 36.000 0.00 0.00 0.00 4.44
6699 20436 5.457140 TCAATTTTGTTGTAGATGCGGTTC 58.543 37.500 0.00 0.00 0.00 3.62
6700 20437 3.529634 TTTTGTTGTAGATGCGGTTCG 57.470 42.857 0.00 0.00 0.00 3.95
6731 20509 5.048434 GGATGAACTTCACCTCCTTTTTCAG 60.048 44.000 4.68 0.00 0.00 3.02
6777 20592 3.726557 TCTCTCAGCCATGGTTCATTT 57.273 42.857 14.67 0.00 0.00 2.32
6779 20594 1.820519 TCTCAGCCATGGTTCATTTGC 59.179 47.619 14.67 0.00 0.00 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 0.837691 TCTGTGGTGGTCATGGAGCT 60.838 55.000 0.00 0.00 0.00 4.09
22 23 1.544825 CCCGTCTCTGTGGTGGTCAT 61.545 60.000 0.00 0.00 0.00 3.06
69 70 2.236382 GCTGATCTTGGCGAGCTCG 61.236 63.158 31.37 31.37 43.27 5.03
85 86 1.066787 GTTAAGCGACCTCTCCTTGCT 60.067 52.381 0.00 0.00 37.53 3.91
88 89 1.542492 TCGTTAAGCGACCTCTCCTT 58.458 50.000 0.00 0.00 45.68 3.36
142 143 3.984732 GGCCTTTGGAGCCCTGGT 61.985 66.667 0.00 0.00 45.16 4.00
199 200 4.527583 GAGCCGCTCTGCCTCCTG 62.528 72.222 13.42 0.00 0.00 3.86
249 250 1.811266 CGAACGAGGGCCATGACAG 60.811 63.158 6.18 0.00 0.00 3.51
252 253 4.467084 GCCGAACGAGGGCCATGA 62.467 66.667 6.18 0.00 44.97 3.07
263 264 4.388499 TCCCTCAAGCGGCCGAAC 62.388 66.667 33.48 12.91 0.00 3.95
264 265 4.388499 GTCCCTCAAGCGGCCGAA 62.388 66.667 33.48 9.74 0.00 4.30
269 270 3.019003 ATCGTGGTCCCTCAAGCGG 62.019 63.158 0.00 0.00 0.00 5.52
270 271 1.811266 CATCGTGGTCCCTCAAGCG 60.811 63.158 0.00 0.00 0.00 4.68
271 272 0.741221 GTCATCGTGGTCCCTCAAGC 60.741 60.000 0.00 0.00 0.00 4.01
272 273 0.458543 CGTCATCGTGGTCCCTCAAG 60.459 60.000 0.00 0.00 0.00 3.02
273 274 0.896479 TCGTCATCGTGGTCCCTCAA 60.896 55.000 0.00 0.00 38.33 3.02
274 275 0.683179 ATCGTCATCGTGGTCCCTCA 60.683 55.000 0.00 0.00 38.33 3.86
275 276 0.249073 CATCGTCATCGTGGTCCCTC 60.249 60.000 0.00 0.00 38.33 4.30
276 277 1.676678 CCATCGTCATCGTGGTCCCT 61.677 60.000 0.00 0.00 38.33 4.20
277 278 1.227263 CCATCGTCATCGTGGTCCC 60.227 63.158 0.00 0.00 38.33 4.46
278 279 1.883084 GCCATCGTCATCGTGGTCC 60.883 63.158 0.00 0.00 39.00 4.46
279 280 1.153647 TGCCATCGTCATCGTGGTC 60.154 57.895 0.00 0.00 39.00 4.02
280 281 1.447838 GTGCCATCGTCATCGTGGT 60.448 57.895 0.00 0.00 39.00 4.16
281 282 2.173669 GGTGCCATCGTCATCGTGG 61.174 63.158 0.00 0.00 39.42 4.94
282 283 2.516589 CGGTGCCATCGTCATCGTG 61.517 63.158 0.00 0.00 38.33 4.35
283 284 2.202743 CGGTGCCATCGTCATCGT 60.203 61.111 0.00 0.00 38.33 3.73
284 285 2.961721 CCGGTGCCATCGTCATCG 60.962 66.667 0.00 0.00 37.76 3.84
285 286 3.272334 GCCGGTGCCATCGTCATC 61.272 66.667 1.90 0.00 0.00 2.92
304 305 4.980805 TTGCCACACCGCCGTCTC 62.981 66.667 0.00 0.00 0.00 3.36
305 306 4.988598 CTTGCCACACCGCCGTCT 62.989 66.667 0.00 0.00 0.00 4.18
330 331 3.475774 CAACTCGTACGCGTGGCC 61.476 66.667 24.59 8.72 39.49 5.36
331 332 3.475774 CCAACTCGTACGCGTGGC 61.476 66.667 24.59 13.80 39.49 5.01
332 333 2.049802 ACCAACTCGTACGCGTGG 60.050 61.111 24.59 22.37 37.66 4.94
333 334 2.423031 CGACCAACTCGTACGCGTG 61.423 63.158 24.59 7.50 37.64 5.34
334 335 2.127118 CGACCAACTCGTACGCGT 60.127 61.111 19.17 19.17 37.64 6.01
342 343 4.500603 ACATATATCGGACGACCAACTC 57.499 45.455 4.48 0.00 35.59 3.01
343 344 4.931661 AACATATATCGGACGACCAACT 57.068 40.909 4.48 0.00 35.59 3.16
344 345 7.647907 AAATAACATATATCGGACGACCAAC 57.352 36.000 4.48 0.00 35.59 3.77
345 346 9.932207 ATAAAATAACATATATCGGACGACCAA 57.068 29.630 4.48 0.00 35.59 3.67
346 347 9.932207 AATAAAATAACATATATCGGACGACCA 57.068 29.630 4.48 0.00 35.59 4.02
378 379 8.776470 TCGATATTTTGACCGTTTAGAAAAACT 58.224 29.630 0.14 0.00 42.39 2.66
379 380 8.834212 GTCGATATTTTGACCGTTTAGAAAAAC 58.166 33.333 0.00 0.00 41.36 2.43
380 381 8.776470 AGTCGATATTTTGACCGTTTAGAAAAA 58.224 29.630 0.00 0.00 37.00 1.94
381 382 8.314143 AGTCGATATTTTGACCGTTTAGAAAA 57.686 30.769 0.00 0.00 37.00 2.29
382 383 7.894376 AGTCGATATTTTGACCGTTTAGAAA 57.106 32.000 0.00 0.00 37.00 2.52
383 384 7.894376 AAGTCGATATTTTGACCGTTTAGAA 57.106 32.000 0.00 0.00 37.00 2.10
384 385 7.894376 AAAGTCGATATTTTGACCGTTTAGA 57.106 32.000 0.00 0.00 37.00 2.10
385 386 8.944212 AAAAAGTCGATATTTTGACCGTTTAG 57.056 30.769 10.84 0.00 37.00 1.85
418 419 9.778993 CGAATTTCATTGAAGTTCAGACATAAT 57.221 29.630 25.17 1.92 37.88 1.28
419 420 8.783093 ACGAATTTCATTGAAGTTCAGACATAA 58.217 29.630 25.17 0.00 37.88 1.90
420 421 8.322906 ACGAATTTCATTGAAGTTCAGACATA 57.677 30.769 25.17 0.00 37.88 2.29
421 422 7.206981 ACGAATTTCATTGAAGTTCAGACAT 57.793 32.000 25.17 9.48 37.88 3.06
422 423 6.293407 GGACGAATTTCATTGAAGTTCAGACA 60.293 38.462 25.17 1.57 37.88 3.41
423 424 6.080406 GGACGAATTTCATTGAAGTTCAGAC 58.920 40.000 25.17 18.88 37.88 3.51
424 425 5.107104 CGGACGAATTTCATTGAAGTTCAGA 60.107 40.000 25.17 0.00 37.88 3.27
425 426 5.082059 CGGACGAATTTCATTGAAGTTCAG 58.918 41.667 25.17 20.66 37.88 3.02
426 427 4.083537 CCGGACGAATTTCATTGAAGTTCA 60.084 41.667 25.17 0.08 37.88 3.18
427 428 4.083484 ACCGGACGAATTTCATTGAAGTTC 60.083 41.667 19.31 19.31 35.76 3.01
428 429 3.818773 ACCGGACGAATTTCATTGAAGTT 59.181 39.130 9.46 6.84 0.00 2.66
429 430 3.408634 ACCGGACGAATTTCATTGAAGT 58.591 40.909 9.46 0.00 0.00 3.01
430 431 4.419522 AACCGGACGAATTTCATTGAAG 57.580 40.909 9.46 0.00 0.00 3.02
431 432 4.276183 TCAAACCGGACGAATTTCATTGAA 59.724 37.500 9.46 0.00 0.00 2.69
432 433 3.815962 TCAAACCGGACGAATTTCATTGA 59.184 39.130 9.46 0.06 0.00 2.57
433 434 4.153958 TCAAACCGGACGAATTTCATTG 57.846 40.909 9.46 0.00 0.00 2.82
434 435 4.839668 TTCAAACCGGACGAATTTCATT 57.160 36.364 9.46 0.00 0.00 2.57
435 436 5.048364 TGAATTCAAACCGGACGAATTTCAT 60.048 36.000 22.27 8.51 38.98 2.57
436 437 4.276183 TGAATTCAAACCGGACGAATTTCA 59.724 37.500 22.27 18.86 38.98 2.69
437 438 4.789784 TGAATTCAAACCGGACGAATTTC 58.210 39.130 22.27 17.41 38.98 2.17
438 439 4.839668 TGAATTCAAACCGGACGAATTT 57.160 36.364 22.27 6.56 38.98 1.82
439 440 4.436852 CGATGAATTCAAACCGGACGAATT 60.437 41.667 21.84 21.84 40.98 2.17
440 441 3.063452 CGATGAATTCAAACCGGACGAAT 59.937 43.478 13.09 10.22 0.00 3.34
441 442 2.413796 CGATGAATTCAAACCGGACGAA 59.586 45.455 13.09 8.03 0.00 3.85
442 443 1.996898 CGATGAATTCAAACCGGACGA 59.003 47.619 13.09 0.00 0.00 4.20
443 444 1.996898 TCGATGAATTCAAACCGGACG 59.003 47.619 13.09 9.57 0.00 4.79
444 445 4.616181 ATTCGATGAATTCAAACCGGAC 57.384 40.909 13.09 0.00 0.00 4.79
445 446 4.457603 ACAATTCGATGAATTCAAACCGGA 59.542 37.500 13.09 11.42 39.82 5.14
446 447 4.732784 ACAATTCGATGAATTCAAACCGG 58.267 39.130 13.09 0.00 39.82 5.28
447 448 5.629020 ACAACAATTCGATGAATTCAAACCG 59.371 36.000 13.09 15.51 39.82 4.44
448 449 6.089417 GGACAACAATTCGATGAATTCAAACC 59.911 38.462 13.09 4.16 39.82 3.27
449 450 6.183359 CGGACAACAATTCGATGAATTCAAAC 60.183 38.462 13.09 8.88 39.82 2.93
450 451 5.855925 CGGACAACAATTCGATGAATTCAAA 59.144 36.000 13.09 2.66 39.82 2.69
451 452 5.389778 CGGACAACAATTCGATGAATTCAA 58.610 37.500 13.09 0.00 39.82 2.69
452 453 4.142708 CCGGACAACAATTCGATGAATTCA 60.143 41.667 11.26 11.26 39.82 2.57
453 454 4.094294 TCCGGACAACAATTCGATGAATTC 59.906 41.667 0.00 0.00 39.82 2.17
454 455 4.006989 TCCGGACAACAATTCGATGAATT 58.993 39.130 0.00 0.00 42.14 2.17
455 456 3.605634 TCCGGACAACAATTCGATGAAT 58.394 40.909 0.00 0.00 33.25 2.57
456 457 3.046968 TCCGGACAACAATTCGATGAA 57.953 42.857 0.00 0.00 0.00 2.57
457 458 2.753055 TCCGGACAACAATTCGATGA 57.247 45.000 0.00 0.00 0.00 2.92
458 459 2.677836 ACATCCGGACAACAATTCGATG 59.322 45.455 6.12 0.00 0.00 3.84
459 460 2.985896 ACATCCGGACAACAATTCGAT 58.014 42.857 6.12 0.00 0.00 3.59
460 461 2.465860 ACATCCGGACAACAATTCGA 57.534 45.000 6.12 0.00 0.00 3.71
461 462 4.210537 GGTATACATCCGGACAACAATTCG 59.789 45.833 6.12 0.00 0.00 3.34
462 463 5.120399 TGGTATACATCCGGACAACAATTC 58.880 41.667 6.12 0.00 0.00 2.17
463 464 5.105567 TGGTATACATCCGGACAACAATT 57.894 39.130 6.12 0.00 0.00 2.32
464 465 4.764050 TGGTATACATCCGGACAACAAT 57.236 40.909 6.12 0.00 0.00 2.71
465 466 4.764050 ATGGTATACATCCGGACAACAA 57.236 40.909 6.12 0.00 33.53 2.83
476 477 5.063204 CCATCCAACGTTGATGGTATACAT 58.937 41.667 30.96 9.58 44.18 2.29
477 478 4.447290 CCATCCAACGTTGATGGTATACA 58.553 43.478 30.96 8.05 40.57 2.29
478 479 3.250040 GCCATCCAACGTTGATGGTATAC 59.750 47.826 34.59 24.46 45.57 1.47
479 480 3.472652 GCCATCCAACGTTGATGGTATA 58.527 45.455 34.59 16.10 45.57 1.47
480 481 2.297701 GCCATCCAACGTTGATGGTAT 58.702 47.619 34.59 19.54 45.57 2.73
481 482 1.745232 GCCATCCAACGTTGATGGTA 58.255 50.000 34.59 18.58 45.57 3.25
482 483 1.305219 CGCCATCCAACGTTGATGGT 61.305 55.000 34.59 18.10 45.57 3.55
483 484 1.429021 CGCCATCCAACGTTGATGG 59.571 57.895 32.91 32.91 46.32 3.51
484 485 1.429021 CCGCCATCCAACGTTGATG 59.571 57.895 29.35 25.33 0.00 3.07
485 486 2.406616 GCCGCCATCCAACGTTGAT 61.407 57.895 29.35 16.94 0.00 2.57
486 487 3.053291 GCCGCCATCCAACGTTGA 61.053 61.111 29.35 15.43 0.00 3.18
487 488 4.114997 GGCCGCCATCCAACGTTG 62.115 66.667 21.47 21.47 0.00 4.10
488 489 4.344865 AGGCCGCCATCCAACGTT 62.345 61.111 13.15 0.00 0.00 3.99
489 490 4.778143 GAGGCCGCCATCCAACGT 62.778 66.667 13.15 0.00 0.00 3.99
500 501 3.282157 CATGAATGCGGGAGGCCG 61.282 66.667 0.00 0.00 42.61 6.13
501 502 2.124151 ACATGAATGCGGGAGGCC 60.124 61.111 0.00 0.00 42.61 5.19
502 503 2.189499 GGACATGAATGCGGGAGGC 61.189 63.158 0.00 0.00 43.96 4.70
503 504 1.889105 CGGACATGAATGCGGGAGG 60.889 63.158 0.00 0.00 0.00 4.30
504 505 1.153369 ACGGACATGAATGCGGGAG 60.153 57.895 0.00 0.00 0.00 4.30
505 506 1.449423 CACGGACATGAATGCGGGA 60.449 57.895 0.00 0.00 0.00 5.14
506 507 1.024046 TTCACGGACATGAATGCGGG 61.024 55.000 0.00 0.00 33.62 6.13
507 508 0.096976 GTTCACGGACATGAATGCGG 59.903 55.000 0.00 0.00 40.60 5.69
508 509 1.078709 AGTTCACGGACATGAATGCG 58.921 50.000 0.00 0.00 40.60 4.73
509 510 2.076100 TCAGTTCACGGACATGAATGC 58.924 47.619 0.00 0.00 40.60 3.56
510 511 3.310774 GGATCAGTTCACGGACATGAATG 59.689 47.826 0.00 0.00 40.60 2.67
511 512 3.535561 GGATCAGTTCACGGACATGAAT 58.464 45.455 0.00 0.00 40.60 2.57
512 513 2.354704 GGGATCAGTTCACGGACATGAA 60.355 50.000 0.00 0.00 36.23 2.57
513 514 1.207089 GGGATCAGTTCACGGACATGA 59.793 52.381 0.00 0.00 0.00 3.07
514 515 1.656652 GGGATCAGTTCACGGACATG 58.343 55.000 0.00 0.00 0.00 3.21
515 516 0.541863 GGGGATCAGTTCACGGACAT 59.458 55.000 0.00 0.00 0.00 3.06
516 517 0.544357 AGGGGATCAGTTCACGGACA 60.544 55.000 0.00 0.00 0.00 4.02
517 518 0.175989 GAGGGGATCAGTTCACGGAC 59.824 60.000 0.00 0.00 0.00 4.79
518 519 0.252057 TGAGGGGATCAGTTCACGGA 60.252 55.000 0.00 0.00 32.77 4.69
519 520 0.833287 ATGAGGGGATCAGTTCACGG 59.167 55.000 0.00 0.00 42.53 4.94
520 521 1.208052 ACATGAGGGGATCAGTTCACG 59.792 52.381 0.00 0.00 42.53 4.35
521 522 3.274288 GAACATGAGGGGATCAGTTCAC 58.726 50.000 0.00 0.00 42.53 3.18
522 523 2.093500 CGAACATGAGGGGATCAGTTCA 60.093 50.000 0.00 0.00 42.53 3.18
523 524 2.555199 CGAACATGAGGGGATCAGTTC 58.445 52.381 0.00 0.00 42.53 3.01
524 525 1.407437 GCGAACATGAGGGGATCAGTT 60.407 52.381 0.00 0.00 42.53 3.16
525 526 0.179000 GCGAACATGAGGGGATCAGT 59.821 55.000 0.00 0.00 42.53 3.41
526 527 0.877649 CGCGAACATGAGGGGATCAG 60.878 60.000 0.00 0.00 42.53 2.90
527 528 1.143838 CGCGAACATGAGGGGATCA 59.856 57.895 0.00 0.00 43.70 2.92
528 529 0.179084 TTCGCGAACATGAGGGGATC 60.179 55.000 19.38 0.00 0.00 3.36
529 530 0.469917 ATTCGCGAACATGAGGGGAT 59.530 50.000 26.00 0.22 0.00 3.85
530 531 1.068588 CTATTCGCGAACATGAGGGGA 59.931 52.381 26.00 0.00 0.00 4.81
531 532 1.068588 TCTATTCGCGAACATGAGGGG 59.931 52.381 26.00 0.00 0.00 4.79
532 533 2.509052 TCTATTCGCGAACATGAGGG 57.491 50.000 26.00 9.11 0.00 4.30
533 534 3.604198 CGTATCTATTCGCGAACATGAGG 59.396 47.826 26.00 10.38 0.00 3.86
534 535 3.604198 CCGTATCTATTCGCGAACATGAG 59.396 47.826 26.00 18.05 0.00 2.90
535 536 3.561503 CCGTATCTATTCGCGAACATGA 58.438 45.455 26.00 21.13 0.00 3.07
536 537 2.661675 CCCGTATCTATTCGCGAACATG 59.338 50.000 26.00 16.57 0.00 3.21
537 538 2.352421 CCCCGTATCTATTCGCGAACAT 60.352 50.000 26.00 17.98 0.00 2.71
538 539 1.001048 CCCCGTATCTATTCGCGAACA 60.001 52.381 26.00 12.73 0.00 3.18
539 540 1.267806 TCCCCGTATCTATTCGCGAAC 59.732 52.381 26.00 10.22 0.00 3.95
540 541 1.608055 TCCCCGTATCTATTCGCGAA 58.392 50.000 25.66 25.66 0.00 4.70
541 542 1.608055 TTCCCCGTATCTATTCGCGA 58.392 50.000 3.71 3.71 0.00 5.87
542 543 2.427232 TTTCCCCGTATCTATTCGCG 57.573 50.000 0.00 0.00 0.00 5.87
543 544 5.164022 CGTAAATTTCCCCGTATCTATTCGC 60.164 44.000 0.00 0.00 0.00 4.70
544 545 5.346822 CCGTAAATTTCCCCGTATCTATTCG 59.653 44.000 0.00 0.00 0.00 3.34
545 546 6.226052 ACCGTAAATTTCCCCGTATCTATTC 58.774 40.000 0.00 0.00 0.00 1.75
546 547 6.178607 ACCGTAAATTTCCCCGTATCTATT 57.821 37.500 0.00 0.00 0.00 1.73
547 548 5.813513 ACCGTAAATTTCCCCGTATCTAT 57.186 39.130 0.00 0.00 0.00 1.98
548 549 5.358922 CAACCGTAAATTTCCCCGTATCTA 58.641 41.667 0.00 0.00 0.00 1.98
549 550 4.193865 CAACCGTAAATTTCCCCGTATCT 58.806 43.478 0.00 0.00 0.00 1.98
550 551 3.242837 GCAACCGTAAATTTCCCCGTATC 60.243 47.826 0.00 0.00 0.00 2.24
551 552 2.684374 GCAACCGTAAATTTCCCCGTAT 59.316 45.455 0.00 0.00 0.00 3.06
552 553 2.083002 GCAACCGTAAATTTCCCCGTA 58.917 47.619 0.00 0.00 0.00 4.02
553 554 0.883153 GCAACCGTAAATTTCCCCGT 59.117 50.000 0.00 0.00 0.00 5.28
554 555 0.171679 GGCAACCGTAAATTTCCCCG 59.828 55.000 0.00 0.00 0.00 5.73
555 556 0.171679 CGGCAACCGTAAATTTCCCC 59.828 55.000 0.00 0.00 42.73 4.81
556 557 3.706287 CGGCAACCGTAAATTTCCC 57.294 52.632 0.00 0.00 42.73 3.97
567 568 1.095807 GGGCATCTCTAACGGCAACC 61.096 60.000 0.00 0.00 0.00 3.77
568 569 0.107654 AGGGCATCTCTAACGGCAAC 60.108 55.000 0.00 0.00 0.00 4.17
569 570 0.107703 CAGGGCATCTCTAACGGCAA 60.108 55.000 0.00 0.00 0.00 4.52
570 571 0.975556 TCAGGGCATCTCTAACGGCA 60.976 55.000 0.00 0.00 0.00 5.69
571 572 0.249657 CTCAGGGCATCTCTAACGGC 60.250 60.000 0.00 0.00 0.00 5.68
572 573 1.403814 TCTCAGGGCATCTCTAACGG 58.596 55.000 0.00 0.00 0.00 4.44
573 574 3.057174 GGTATCTCAGGGCATCTCTAACG 60.057 52.174 0.00 0.00 0.00 3.18
574 575 3.898123 TGGTATCTCAGGGCATCTCTAAC 59.102 47.826 0.00 0.00 0.00 2.34
575 576 4.199002 TGGTATCTCAGGGCATCTCTAA 57.801 45.455 0.00 0.00 0.00 2.10
576 577 3.903530 TGGTATCTCAGGGCATCTCTA 57.096 47.619 0.00 0.00 0.00 2.43
577 578 2.783379 TGGTATCTCAGGGCATCTCT 57.217 50.000 0.00 0.00 0.00 3.10
578 579 3.196685 GGTATGGTATCTCAGGGCATCTC 59.803 52.174 0.00 0.00 0.00 2.75
579 580 3.177228 GGTATGGTATCTCAGGGCATCT 58.823 50.000 0.00 0.00 0.00 2.90
580 581 3.055530 CAGGTATGGTATCTCAGGGCATC 60.056 52.174 0.00 0.00 0.00 3.91
581 582 2.909006 CAGGTATGGTATCTCAGGGCAT 59.091 50.000 0.00 0.00 0.00 4.40
582 583 2.329267 CAGGTATGGTATCTCAGGGCA 58.671 52.381 0.00 0.00 0.00 5.36
583 584 2.330216 ACAGGTATGGTATCTCAGGGC 58.670 52.381 0.00 0.00 0.00 5.19
584 585 3.506455 CGTACAGGTATGGTATCTCAGGG 59.494 52.174 0.00 0.00 0.00 4.45
585 586 4.023107 CACGTACAGGTATGGTATCTCAGG 60.023 50.000 3.90 0.00 0.00 3.86
586 587 4.579340 ACACGTACAGGTATGGTATCTCAG 59.421 45.833 3.90 0.00 0.00 3.35
587 588 4.337274 CACACGTACAGGTATGGTATCTCA 59.663 45.833 3.90 0.00 0.00 3.27
588 589 4.261489 CCACACGTACAGGTATGGTATCTC 60.261 50.000 3.90 0.00 0.00 2.75
589 590 3.635373 CCACACGTACAGGTATGGTATCT 59.365 47.826 3.90 0.00 0.00 1.98
590 591 3.797865 GCCACACGTACAGGTATGGTATC 60.798 52.174 1.75 0.00 0.00 2.24
591 592 2.101917 GCCACACGTACAGGTATGGTAT 59.898 50.000 1.75 0.00 0.00 2.73
592 593 1.477700 GCCACACGTACAGGTATGGTA 59.522 52.381 1.75 0.00 0.00 3.25
593 594 0.248289 GCCACACGTACAGGTATGGT 59.752 55.000 1.75 0.00 0.00 3.55
594 595 0.461339 GGCCACACGTACAGGTATGG 60.461 60.000 0.00 0.00 0.00 2.74
595 596 0.248012 TGGCCACACGTACAGGTATG 59.752 55.000 0.00 0.00 0.00 2.39
596 597 0.248289 GTGGCCACACGTACAGGTAT 59.752 55.000 31.23 0.00 37.94 2.73
597 598 1.667151 GTGGCCACACGTACAGGTA 59.333 57.895 31.23 0.00 37.94 3.08
598 599 2.424302 GTGGCCACACGTACAGGT 59.576 61.111 31.23 0.00 37.94 4.00
644 653 3.904717 TCTCCTCTCCTCATTGTACTCC 58.095 50.000 0.00 0.00 0.00 3.85
645 654 4.522789 GGATCTCCTCTCCTCATTGTACTC 59.477 50.000 0.00 0.00 0.00 2.59
696 705 1.008538 GCTTGCCGGTTTGTCTGTG 60.009 57.895 1.90 0.00 0.00 3.66
700 712 0.887387 TGGTAGCTTGCCGGTTTGTC 60.887 55.000 1.90 0.00 0.00 3.18
714 726 0.861837 GAAAGCGATGCGGATGGTAG 59.138 55.000 0.00 0.00 0.00 3.18
717 729 0.531532 AGAGAAAGCGATGCGGATGG 60.532 55.000 0.00 0.00 0.00 3.51
809 821 7.759886 TGTCATCACTTTGTCAGCTAATACTAC 59.240 37.037 0.00 0.00 0.00 2.73
877 889 2.109126 GGAGCCGGACTTGATGTGC 61.109 63.158 5.05 0.00 0.00 4.57
916 928 1.384989 TAGCGCTACTCTCTGGTGGC 61.385 60.000 14.45 0.00 39.72 5.01
946 958 6.921486 TTTATAGACTTGGTACCAGTGACA 57.079 37.500 15.65 0.00 0.00 3.58
947 959 6.761714 CCATTTATAGACTTGGTACCAGTGAC 59.238 42.308 15.65 12.17 0.00 3.67
948 960 6.670464 TCCATTTATAGACTTGGTACCAGTGA 59.330 38.462 15.65 0.00 0.00 3.41
949 961 6.884832 TCCATTTATAGACTTGGTACCAGTG 58.115 40.000 15.65 14.31 0.00 3.66
1010 1022 2.587522 GACCTTCAAATAGGGATGGCC 58.412 52.381 0.00 0.00 39.76 5.36
1015 1027 1.557832 CACCCGACCTTCAAATAGGGA 59.442 52.381 5.23 0.00 41.26 4.20
1035 1048 3.440872 AGGCGGTTATATGTCGATCTCTC 59.559 47.826 0.00 0.00 0.00 3.20
1036 1049 3.191581 CAGGCGGTTATATGTCGATCTCT 59.808 47.826 0.00 0.00 0.00 3.10
1121 1136 1.007964 CATCGCTGCTACCTCCTCG 60.008 63.158 0.00 0.00 0.00 4.63
1153 1168 4.020617 CCTCCACGGCCAAGCTCA 62.021 66.667 2.24 0.00 0.00 4.26
1344 1368 3.181468 TGTTGAGATGGATCAGCTAGCAG 60.181 47.826 18.83 9.54 32.21 4.24
1345 1369 2.767960 TGTTGAGATGGATCAGCTAGCA 59.232 45.455 18.83 0.00 32.21 3.49
1346 1370 3.465742 TGTTGAGATGGATCAGCTAGC 57.534 47.619 6.62 6.62 32.21 3.42
1352 1376 4.263199 GGCCTATGATGTTGAGATGGATCA 60.263 45.833 0.00 0.00 0.00 2.92
1353 1377 4.260170 GGCCTATGATGTTGAGATGGATC 58.740 47.826 0.00 0.00 0.00 3.36
1365 1389 3.630769 GCATACATCCATGGCCTATGATG 59.369 47.826 16.65 20.39 39.21 3.07
1383 1407 1.347062 TATGGATCAGCCCGTGCATA 58.653 50.000 0.00 0.00 41.13 3.14
1656 1681 7.675637 GCATAGGAACGAGTTGTTAATTACCAC 60.676 40.741 0.00 0.00 42.09 4.16
1671 1759 2.176045 TGAGGTGAAGCATAGGAACGA 58.824 47.619 0.00 0.00 0.00 3.85
1681 1769 5.334252 ACGAAAGTTACCATGAGGTGAAGC 61.334 45.833 0.00 0.00 46.15 3.86
1800 1905 1.635487 TCCCCATCCAACTCTCAAAGG 59.365 52.381 0.00 0.00 0.00 3.11
1883 3509 2.241880 CGACGGACGTTTTGTGCCT 61.242 57.895 0.00 0.00 35.07 4.75
1901 3527 1.852067 ATTTTCTGTGGCGCGACACC 61.852 55.000 39.97 23.38 40.62 4.16
1921 3547 1.809869 GCCCGCCTCCAATTTTCTC 59.190 57.895 0.00 0.00 0.00 2.87
1922 3548 2.046285 CGCCCGCCTCCAATTTTCT 61.046 57.895 0.00 0.00 0.00 2.52
1923 3549 1.993369 CTCGCCCGCCTCCAATTTTC 61.993 60.000 0.00 0.00 0.00 2.29
1924 3550 2.034999 TCGCCCGCCTCCAATTTT 59.965 55.556 0.00 0.00 0.00 1.82
1925 3551 1.906105 TACTCGCCCGCCTCCAATTT 61.906 55.000 0.00 0.00 0.00 1.82
1926 3552 2.311688 CTACTCGCCCGCCTCCAATT 62.312 60.000 0.00 0.00 0.00 2.32
1927 3553 2.762459 TACTCGCCCGCCTCCAAT 60.762 61.111 0.00 0.00 0.00 3.16
1928 3554 3.458163 CTACTCGCCCGCCTCCAA 61.458 66.667 0.00 0.00 0.00 3.53
1980 3606 2.305009 ACGGACTGCCCTACATACTAC 58.695 52.381 0.00 0.00 0.00 2.73
1986 3612 1.927487 TTTCTACGGACTGCCCTACA 58.073 50.000 0.00 0.00 0.00 2.74
1987 3613 3.538634 ATTTTCTACGGACTGCCCTAC 57.461 47.619 0.00 0.00 0.00 3.18
1988 3614 5.145564 AGATATTTTCTACGGACTGCCCTA 58.854 41.667 0.00 0.00 30.96 3.53
1989 3615 3.967987 AGATATTTTCTACGGACTGCCCT 59.032 43.478 0.00 0.00 30.96 5.19
1991 3617 6.688578 TGATAGATATTTTCTACGGACTGCC 58.311 40.000 0.00 0.00 39.75 4.85
1992 3618 8.764524 AATGATAGATATTTTCTACGGACTGC 57.235 34.615 0.00 0.00 39.75 4.40
1994 3620 9.930693 GGAAATGATAGATATTTTCTACGGACT 57.069 33.333 0.00 0.00 39.75 3.85
1995 3621 9.930693 AGGAAATGATAGATATTTTCTACGGAC 57.069 33.333 0.00 0.00 39.75 4.79
2008 3636 4.901849 TCCGGACAGAAGGAAATGATAGAT 59.098 41.667 0.00 0.00 32.86 1.98
2017 3645 5.365619 GCTTATAAATCCGGACAGAAGGAA 58.634 41.667 6.12 0.00 40.32 3.36
2021 3666 3.181448 GGGGCTTATAAATCCGGACAGAA 60.181 47.826 6.12 0.00 0.00 3.02
2024 3669 1.422402 GGGGGCTTATAAATCCGGACA 59.578 52.381 6.12 0.00 0.00 4.02
2117 3766 9.696917 ATATTTGTTTTGAAAGAGCTTTTCGAT 57.303 25.926 13.21 3.14 32.11 3.59
2194 3848 5.936956 AGTATTTTGAGCCAGACTTTGAGAG 59.063 40.000 0.00 0.00 0.00 3.20
2195 3849 5.869579 AGTATTTTGAGCCAGACTTTGAGA 58.130 37.500 0.00 0.00 0.00 3.27
2196 3850 7.672983 TTAGTATTTTGAGCCAGACTTTGAG 57.327 36.000 0.00 0.00 0.00 3.02
2207 3861 3.063045 CGTCCCGGTTTAGTATTTTGAGC 59.937 47.826 0.00 0.00 0.00 4.26
2297 3966 0.863799 CAATCATCCATCCGCGTCAG 59.136 55.000 4.92 0.00 0.00 3.51
2300 3969 0.882042 GCTCAATCATCCATCCGCGT 60.882 55.000 4.92 0.00 0.00 6.01
2350 4019 4.442403 TCAGCTATTAGTACGTACGACTCG 59.558 45.833 24.41 10.72 0.00 4.18
2413 4084 2.279120 CAGCCCGATCTCGTCTGC 60.279 66.667 0.00 0.00 37.74 4.26
2415 4086 0.179004 ATCTCAGCCCGATCTCGTCT 60.179 55.000 0.00 0.00 37.74 4.18
2440 4111 2.036387 TCGAGGTCCAAGACAAAGTGA 58.964 47.619 0.00 0.00 33.68 3.41
2443 4114 1.269621 ACGTCGAGGTCCAAGACAAAG 60.270 52.381 4.63 4.04 33.68 2.77
2444 4115 0.748450 ACGTCGAGGTCCAAGACAAA 59.252 50.000 4.63 0.00 33.68 2.83
2454 4125 1.552337 TCTGGACTAGTACGTCGAGGT 59.448 52.381 15.89 15.89 39.37 3.85
2467 4143 2.711922 GGCGGTCACGATCTGGACT 61.712 63.158 11.80 0.00 44.60 3.85
2488 4164 0.172352 GATGGATCGATCTCTCCGGC 59.828 60.000 23.96 6.97 34.05 6.13
2513 4189 1.215014 ATATGACCGCATGCACGTCG 61.215 55.000 22.86 6.50 35.94 5.12
2520 4196 4.496341 GGAGTCAACAAATATGACCGCATG 60.496 45.833 3.23 0.00 46.60 4.06
2521 4197 3.627577 GGAGTCAACAAATATGACCGCAT 59.372 43.478 3.23 0.00 46.60 4.73
2522 4198 3.006940 GGAGTCAACAAATATGACCGCA 58.993 45.455 3.23 0.00 46.60 5.69
2523 4199 3.006940 TGGAGTCAACAAATATGACCGC 58.993 45.455 3.23 0.00 46.60 5.68
2524 4200 4.000325 TGTGGAGTCAACAAATATGACCG 59.000 43.478 0.00 0.00 46.60 4.79
2525 4201 5.957842 TTGTGGAGTCAACAAATATGACC 57.042 39.130 10.81 0.00 46.60 4.02
2526 4202 7.383102 AGATTGTGGAGTCAACAAATATGAC 57.617 36.000 16.98 5.39 45.94 3.06
2560 4249 3.245990 CGATCGTGTAGTCCACATACGTA 59.754 47.826 7.03 0.00 44.78 3.57
2587 4276 2.695359 TCAACTAAAGCGGCTTAGGTG 58.305 47.619 16.73 19.63 44.62 4.00
2684 4381 3.183793 TGCATGCATGTACTCCTAGTG 57.816 47.619 26.79 0.00 0.00 2.74
2685 4382 5.483231 AGATATGCATGCATGTACTCCTAGT 59.517 40.000 37.43 14.58 37.82 2.57
2690 4387 4.001652 AGCAGATATGCATGCATGTACTC 58.998 43.478 37.43 26.72 45.01 2.59
2694 4391 2.858745 TGAGCAGATATGCATGCATGT 58.141 42.857 37.43 32.70 45.01 3.21
2702 4399 3.314357 TGCAATGACTTGAGCAGATATGC 59.686 43.478 3.54 3.54 34.04 3.14
2703 4400 4.552184 CGTGCAATGACTTGAGCAGATATG 60.552 45.833 0.00 0.00 37.72 1.78
2704 4401 3.558829 CGTGCAATGACTTGAGCAGATAT 59.441 43.478 0.00 0.00 37.72 1.63
2736 4433 2.113243 GAGAGCGTGGGGGTCAAACT 62.113 60.000 0.00 0.00 45.66 2.66
2772 4493 2.826128 GGTGACATGTAGAGACCACAGA 59.174 50.000 13.25 0.00 0.00 3.41
2774 4495 2.604139 TGGTGACATGTAGAGACCACA 58.396 47.619 13.25 0.00 31.64 4.17
2779 4500 3.895041 TGTGAGTTGGTGACATGTAGAGA 59.105 43.478 0.00 0.00 42.32 3.10
2793 4514 1.802960 GGAGCATGTCACTGTGAGTTG 59.197 52.381 11.41 12.40 0.00 3.16
2837 4558 4.151070 CACTTACGTGCATGTCATTTGTC 58.849 43.478 16.44 0.00 33.82 3.18
2900 4621 4.438797 CCCGAACGTACGTACATAAATCTG 59.561 45.833 23.12 9.63 0.00 2.90
2902 4623 4.351192 ACCCGAACGTACGTACATAAATC 58.649 43.478 23.12 12.42 0.00 2.17
2924 4648 3.641906 GGTCTCCTCCTCCAATAATTCGA 59.358 47.826 0.00 0.00 0.00 3.71
2925 4649 3.388024 TGGTCTCCTCCTCCAATAATTCG 59.612 47.826 0.00 0.00 0.00 3.34
2963 4687 0.671781 AGCATCACGCACCACTCTTC 60.672 55.000 0.00 0.00 46.13 2.87
2964 4688 0.952497 CAGCATCACGCACCACTCTT 60.952 55.000 0.00 0.00 46.13 2.85
2965 4689 1.375140 CAGCATCACGCACCACTCT 60.375 57.895 0.00 0.00 46.13 3.24
2966 4690 1.374631 TCAGCATCACGCACCACTC 60.375 57.895 0.00 0.00 46.13 3.51
2979 4703 1.300620 CTGGAACGAACGGTCAGCA 60.301 57.895 14.00 3.25 32.53 4.41
2980 4704 0.389948 ATCTGGAACGAACGGTCAGC 60.390 55.000 14.00 0.00 32.53 4.26
2982 4706 0.963225 TGATCTGGAACGAACGGTCA 59.037 50.000 14.00 0.31 32.53 4.02
2992 4716 5.163248 TGTTTCTGTACTGGTTGATCTGGAA 60.163 40.000 0.00 0.00 0.00 3.53
3004 4728 6.287107 ACGTCTGAAAATGTTTCTGTACTG 57.713 37.500 0.00 0.00 0.00 2.74
3005 4729 6.537301 TCAACGTCTGAAAATGTTTCTGTACT 59.463 34.615 0.00 0.00 0.00 2.73
3020 4744 1.234821 GGTGGCAATTCAACGTCTGA 58.765 50.000 0.00 0.00 0.00 3.27
3021 4745 0.950836 TGGTGGCAATTCAACGTCTG 59.049 50.000 0.00 0.00 0.00 3.51
3024 4748 1.066908 CACTTGGTGGCAATTCAACGT 59.933 47.619 0.00 0.00 0.00 3.99
3025 4749 1.336440 TCACTTGGTGGCAATTCAACG 59.664 47.619 0.00 0.00 33.87 4.10
3026 4750 3.451141 TTCACTTGGTGGCAATTCAAC 57.549 42.857 0.00 0.00 33.87 3.18
3028 4752 3.190327 CGTATTCACTTGGTGGCAATTCA 59.810 43.478 0.00 0.00 33.87 2.57
3029 4753 3.427503 CCGTATTCACTTGGTGGCAATTC 60.428 47.826 0.00 0.00 33.87 2.17
3031 4755 2.091541 CCGTATTCACTTGGTGGCAAT 58.908 47.619 0.00 0.00 33.87 3.56
3032 4756 1.202830 ACCGTATTCACTTGGTGGCAA 60.203 47.619 0.00 0.00 33.87 4.52
3057 7807 3.117322 TCCCTCTCCAAGAGATACAGGAG 60.117 52.174 5.54 0.00 45.07 3.69
3059 7809 2.962421 GTCCCTCTCCAAGAGATACAGG 59.038 54.545 5.54 0.00 45.07 4.00
3092 7842 5.255687 TCCACTGATTTGTGCTGTGATAAT 58.744 37.500 0.00 0.00 37.38 1.28
3093 7843 4.650734 TCCACTGATTTGTGCTGTGATAA 58.349 39.130 0.00 0.00 37.38 1.75
3094 7844 4.256110 CTCCACTGATTTGTGCTGTGATA 58.744 43.478 0.00 0.00 37.38 2.15
3095 7845 3.079578 CTCCACTGATTTGTGCTGTGAT 58.920 45.455 0.00 0.00 37.38 3.06
3096 7846 2.158769 ACTCCACTGATTTGTGCTGTGA 60.159 45.455 0.00 0.00 37.38 3.58
3097 7847 2.224606 ACTCCACTGATTTGTGCTGTG 58.775 47.619 0.00 0.00 36.68 3.66
3098 7848 2.645838 ACTCCACTGATTTGTGCTGT 57.354 45.000 0.00 0.00 36.68 4.40
3099 7849 3.434641 CACTACTCCACTGATTTGTGCTG 59.565 47.826 0.00 0.00 36.68 4.41
3100 7850 3.557898 CCACTACTCCACTGATTTGTGCT 60.558 47.826 0.00 0.00 36.68 4.40
3101 7851 2.744202 CCACTACTCCACTGATTTGTGC 59.256 50.000 0.00 0.00 36.68 4.57
3142 7892 6.142161 CGACACACACATTGAACAATAAAAGG 59.858 38.462 0.00 0.00 0.00 3.11
3144 7894 5.457148 GCGACACACACATTGAACAATAAAA 59.543 36.000 0.00 0.00 0.00 1.52
3148 7898 2.357323 TGCGACACACACATTGAACAAT 59.643 40.909 0.00 0.00 0.00 2.71
3151 7907 2.286950 ACATGCGACACACACATTGAAC 60.287 45.455 0.00 0.00 0.00 3.18
3155 7911 2.159531 GCATACATGCGACACACACATT 60.160 45.455 0.00 0.00 44.67 2.71
3193 7953 1.334869 CTGACTTTTCACCAGGTGCAC 59.665 52.381 15.64 8.80 32.98 4.57
3199 7959 1.003545 CGTGCACTGACTTTTCACCAG 60.004 52.381 16.19 0.00 0.00 4.00
3287 8047 7.751732 TGCAAATGATTGTACTAATGAGTGAC 58.248 34.615 0.00 0.00 38.85 3.67
3350 8114 2.747460 GCCCTGCTGTCAATGCGA 60.747 61.111 0.00 0.00 0.00 5.10
3355 8119 1.300963 GATGGAGCCCTGCTGTCAA 59.699 57.895 0.00 0.00 39.88 3.18
3359 8123 0.471191 TATGTGATGGAGCCCTGCTG 59.529 55.000 0.00 0.00 39.88 4.41
3393 8157 9.221933 ACGTGTTATCCATAGTTGATTACAAAA 57.778 29.630 0.00 0.00 34.63 2.44
3411 8175 7.771183 AGAAAATATGCAATTGGACGTGTTAT 58.229 30.769 7.72 0.00 0.00 1.89
3427 8191 8.020819 TCGTGCTAAAAAGACCAAGAAAATATG 58.979 33.333 0.00 0.00 0.00 1.78
3435 8199 5.856126 TGTATCGTGCTAAAAAGACCAAG 57.144 39.130 0.00 0.00 0.00 3.61
3438 8202 5.077424 CGTTTGTATCGTGCTAAAAAGACC 58.923 41.667 0.00 0.00 0.00 3.85
3439 8203 4.548457 GCGTTTGTATCGTGCTAAAAAGAC 59.452 41.667 0.00 0.00 0.00 3.01
3440 8204 4.211584 TGCGTTTGTATCGTGCTAAAAAGA 59.788 37.500 0.00 0.00 0.00 2.52
3441 8205 4.459606 TGCGTTTGTATCGTGCTAAAAAG 58.540 39.130 0.00 0.00 0.00 2.27
3442 8206 4.469625 TGCGTTTGTATCGTGCTAAAAA 57.530 36.364 0.00 0.00 0.00 1.94
3443 8207 4.024725 ACTTGCGTTTGTATCGTGCTAAAA 60.025 37.500 0.00 0.00 0.00 1.52
3444 8208 3.495377 ACTTGCGTTTGTATCGTGCTAAA 59.505 39.130 0.00 0.00 0.00 1.85
3446 8210 2.679450 ACTTGCGTTTGTATCGTGCTA 58.321 42.857 0.00 0.00 0.00 3.49
3448 8212 2.096417 AGAACTTGCGTTTGTATCGTGC 60.096 45.455 0.00 0.00 32.39 5.34
3451 8215 6.892951 GTGTATTAGAACTTGCGTTTGTATCG 59.107 38.462 0.00 0.00 32.39 2.92
3452 8216 6.892951 CGTGTATTAGAACTTGCGTTTGTATC 59.107 38.462 0.00 0.00 32.39 2.24
3453 8217 6.671402 GCGTGTATTAGAACTTGCGTTTGTAT 60.671 38.462 0.00 0.00 32.39 2.29
3455 8219 4.609783 GCGTGTATTAGAACTTGCGTTTGT 60.610 41.667 0.00 0.00 32.39 2.83
3456 8220 3.838550 GCGTGTATTAGAACTTGCGTTTG 59.161 43.478 0.00 0.00 32.39 2.93
3458 8222 3.061322 TGCGTGTATTAGAACTTGCGTT 58.939 40.909 0.00 0.00 35.68 4.84
3461 8225 5.291128 AGTGTATGCGTGTATTAGAACTTGC 59.709 40.000 0.00 0.00 0.00 4.01
3462 8226 6.530181 TGAGTGTATGCGTGTATTAGAACTTG 59.470 38.462 0.00 0.00 0.00 3.16
3463 8227 6.627243 TGAGTGTATGCGTGTATTAGAACTT 58.373 36.000 0.00 0.00 0.00 2.66
3464 8228 6.203808 TGAGTGTATGCGTGTATTAGAACT 57.796 37.500 0.00 0.00 0.00 3.01
3471 8235 4.672587 AGGAATGAGTGTATGCGTGTAT 57.327 40.909 0.00 0.00 0.00 2.29
3476 8240 3.349488 TCGTAGGAATGAGTGTATGCG 57.651 47.619 0.00 0.00 0.00 4.73
3489 8253 2.609491 GCATGTGTGTGTCTTCGTAGGA 60.609 50.000 0.00 0.00 0.00 2.94
3494 8258 0.936600 TGTGCATGTGTGTGTCTTCG 59.063 50.000 0.00 0.00 0.00 3.79
3495 8259 1.942657 AGTGTGCATGTGTGTGTCTTC 59.057 47.619 0.00 0.00 0.00 2.87
3510 8276 3.175152 GTGCTCATCGAAGTAGAGTGTG 58.825 50.000 0.00 0.00 33.54 3.82
3523 8289 3.258372 TCGGTATATTGGAGGTGCTCATC 59.742 47.826 0.00 0.00 31.08 2.92
3539 8305 3.587797 AATGTTGTGTCGTCTCGGTAT 57.412 42.857 0.00 0.00 0.00 2.73
3540 8306 3.374220 AAATGTTGTGTCGTCTCGGTA 57.626 42.857 0.00 0.00 0.00 4.02
3543 8311 3.852471 TCAAAATGTTGTGTCGTCTCG 57.148 42.857 0.00 0.00 36.07 4.04
3564 8332 5.408880 TGCATGTGGTCATTTCATCAATT 57.591 34.783 0.00 0.00 31.15 2.32
3574 8343 2.699073 GCGAGATGCATGTGGTCAT 58.301 52.632 2.46 0.00 45.45 3.06
3624 8393 1.745115 CTTGGCTTTCCGGCGATGA 60.745 57.895 9.30 0.00 42.02 2.92
3658 8428 7.047891 TCAAATCCTAAACTTGATACTCGCAT 58.952 34.615 0.00 0.00 0.00 4.73
3659 8429 6.403049 TCAAATCCTAAACTTGATACTCGCA 58.597 36.000 0.00 0.00 0.00 5.10
3660 8430 6.903883 TCAAATCCTAAACTTGATACTCGC 57.096 37.500 0.00 0.00 0.00 5.03
3661 8431 8.175716 GGTTTCAAATCCTAAACTTGATACTCG 58.824 37.037 0.00 0.00 36.17 4.18
3662 8432 9.232473 AGGTTTCAAATCCTAAACTTGATACTC 57.768 33.333 0.00 0.00 36.17 2.59
3687 8462 5.735285 TCATAGCTCAGATGGTCCATTAG 57.265 43.478 5.65 5.72 0.00 1.73
3689 8464 4.596212 TGATCATAGCTCAGATGGTCCATT 59.404 41.667 5.65 0.00 34.12 3.16
3720 8518 5.065218 CACCTGATGTGTTAACTATTCAGGC 59.935 44.000 30.34 14.29 44.20 4.85
3813 8611 4.978083 TCTCGATGTTGGTAGGTTCTAC 57.022 45.455 0.00 0.00 0.00 2.59
3874 8672 9.907819 TCCAGGATAAGAAGATTAATTAGGGTA 57.092 33.333 0.00 0.00 0.00 3.69
3876 8674 9.898152 GATCCAGGATAAGAAGATTAATTAGGG 57.102 37.037 0.32 0.00 0.00 3.53
3882 8680 8.099537 GCAGATGATCCAGGATAAGAAGATTAA 58.900 37.037 0.32 0.00 0.00 1.40
4047 8910 4.755411 TGCCTCGTTTCTAAAGTAGATGG 58.245 43.478 0.00 0.00 34.22 3.51
4048 8911 5.289675 CACTGCCTCGTTTCTAAAGTAGATG 59.710 44.000 0.00 0.00 34.22 2.90
4103 8966 5.493809 ACGGTATTGGTAGCAAAGTTGTAT 58.506 37.500 12.00 0.00 0.00 2.29
4146 9011 5.046591 ACACTATATATCCCATTGACACCCG 60.047 44.000 0.00 0.00 0.00 5.28
4182 9047 1.071071 TCATCGTCGGGGTTTTCTTGT 59.929 47.619 0.00 0.00 0.00 3.16
5003 10171 1.767681 GGGATCAGCTTCAGGATCTGT 59.232 52.381 10.59 0.00 39.82 3.41
5010 10178 0.831966 AGCAGAGGGATCAGCTTCAG 59.168 55.000 0.00 0.00 32.52 3.02
5118 10286 2.786495 GGATCTCGAAGCTGCCCGA 61.786 63.158 12.84 12.84 0.00 5.14
5378 10546 2.510238 ACGAAGATGCTCAGCCGC 60.510 61.111 0.00 0.00 0.00 6.53
5538 10706 1.065636 CAGGATGAAGCTGCTGAGGAA 60.066 52.381 1.35 0.00 39.69 3.36
5707 10878 2.682494 TGGACTCGGCCCTGTACC 60.682 66.667 0.00 1.17 0.00 3.34
5741 10912 3.788766 GCGTGCACGTCCATGTCC 61.789 66.667 36.80 16.46 42.22 4.02
5815 10987 7.201530 GCAGTGCTTTATACTACTACAACAAGG 60.202 40.741 8.18 0.00 0.00 3.61
5822 11006 7.772332 ATTGTGCAGTGCTTTATACTACTAC 57.228 36.000 17.60 1.68 0.00 2.73
5825 11009 7.117454 CGTAATTGTGCAGTGCTTTATACTAC 58.883 38.462 17.60 3.77 0.00 2.73
5834 11018 2.761559 TGTACGTAATTGTGCAGTGCT 58.238 42.857 17.60 0.00 30.71 4.40
5836 11020 6.984740 AAAATTGTACGTAATTGTGCAGTG 57.015 33.333 0.00 0.00 35.86 3.66
5843 11027 9.212687 CGGTTATGGTAAAATTGTACGTAATTG 57.787 33.333 0.00 0.00 31.05 2.32
5844 11028 8.945057 ACGGTTATGGTAAAATTGTACGTAATT 58.055 29.630 0.00 0.00 31.87 1.40
5848 11032 7.063308 CAGTACGGTTATGGTAAAATTGTACGT 59.937 37.037 0.00 0.00 35.90 3.57
5850 11034 7.148440 TGCAGTACGGTTATGGTAAAATTGTAC 60.148 37.037 0.00 0.00 0.00 2.90
5851 11035 6.877855 TGCAGTACGGTTATGGTAAAATTGTA 59.122 34.615 0.00 0.00 0.00 2.41
5852 11036 5.706369 TGCAGTACGGTTATGGTAAAATTGT 59.294 36.000 0.00 0.00 0.00 2.71
5853 11037 6.184580 TGCAGTACGGTTATGGTAAAATTG 57.815 37.500 0.00 0.00 0.00 2.32
5856 11040 5.549347 TCTTGCAGTACGGTTATGGTAAAA 58.451 37.500 0.00 0.00 0.00 1.52
5857 11041 5.149973 TCTTGCAGTACGGTTATGGTAAA 57.850 39.130 0.00 0.00 0.00 2.01
5858 11042 4.804868 TCTTGCAGTACGGTTATGGTAA 57.195 40.909 0.00 0.00 0.00 2.85
5860 11044 3.906720 ATCTTGCAGTACGGTTATGGT 57.093 42.857 0.00 0.00 0.00 3.55
5891 11255 1.001181 TGGTTACCAACAGGTCGTAGC 59.999 52.381 0.00 0.00 36.84 3.58
5901 11465 0.109132 GCTGCATGCTGGTTACCAAC 60.109 55.000 23.88 0.82 38.95 3.77
5908 11472 3.951769 GAAGGGGCTGCATGCTGGT 62.952 63.158 23.88 0.92 42.39 4.00
5909 11473 3.145551 GAAGGGGCTGCATGCTGG 61.146 66.667 23.88 15.23 42.39 4.85
5910 11474 3.145551 GGAAGGGGCTGCATGCTG 61.146 66.667 20.33 19.80 42.39 4.41
5911 11475 4.809496 CGGAAGGGGCTGCATGCT 62.809 66.667 20.33 0.00 42.39 3.79
5913 11477 2.361610 AACGGAAGGGGCTGCATG 60.362 61.111 0.50 0.00 0.00 4.06
5938 11509 1.674651 GCCCCTCTGTTTCGTTCCC 60.675 63.158 0.00 0.00 0.00 3.97
5939 11510 0.955919 CAGCCCCTCTGTTTCGTTCC 60.956 60.000 0.00 0.00 38.02 3.62
5945 11516 1.073199 CGAACCAGCCCCTCTGTTT 59.927 57.895 0.00 0.00 41.25 2.83
5960 11531 2.050714 GTGTGCGTCCGAGTCGAA 60.051 61.111 15.64 0.00 0.00 3.71
5985 11560 4.264850 TGAGGGATATATGGACGGGAGATT 60.265 45.833 0.00 0.00 0.00 2.40
5991 11566 3.193691 GTCAGTGAGGGATATATGGACGG 59.806 52.174 0.00 0.00 0.00 4.79
6003 11578 1.033574 GATCGTAGGGTCAGTGAGGG 58.966 60.000 0.00 0.00 0.00 4.30
6013 11590 3.895656 TCTAGATTGTTGGGATCGTAGGG 59.104 47.826 0.00 0.00 0.00 3.53
6014 11591 5.290386 GTTCTAGATTGTTGGGATCGTAGG 58.710 45.833 0.00 0.00 0.00 3.18
6017 11594 3.446161 TCGTTCTAGATTGTTGGGATCGT 59.554 43.478 0.00 0.00 0.00 3.73
6019 11596 4.267928 CGTTCGTTCTAGATTGTTGGGATC 59.732 45.833 0.00 0.00 0.00 3.36
6027 11604 3.061139 GCGGAATCGTTCGTTCTAGATTG 60.061 47.826 0.00 0.00 38.89 2.67
6054 11631 0.033228 CTCCATGGACGGCAGAGATC 59.967 60.000 11.44 0.00 0.00 2.75
6062 11639 2.317149 GAAGCTCCCTCCATGGACGG 62.317 65.000 20.60 20.60 38.35 4.79
6067 11644 2.037620 CTCCGGAAGCTCCCTCCATG 62.038 65.000 5.23 0.00 31.13 3.66
6073 11650 1.265454 TTCCTTCTCCGGAAGCTCCC 61.265 60.000 5.23 0.00 45.44 4.30
6075 11652 1.676314 GGTTTCCTTCTCCGGAAGCTC 60.676 57.143 5.23 0.00 45.44 4.09
6085 11662 2.548547 GGGGCCAGGGTTTCCTTCT 61.549 63.158 4.39 0.00 42.67 2.85
6122 11712 4.796231 CAGGCCGTCGAACTCCGG 62.796 72.222 7.77 7.77 46.90 5.14
6123 11713 3.569049 AACAGGCCGTCGAACTCCG 62.569 63.158 0.00 0.00 40.25 4.63
6124 11714 1.737008 GAACAGGCCGTCGAACTCC 60.737 63.158 0.00 0.00 0.00 3.85
6125 11715 1.737008 GGAACAGGCCGTCGAACTC 60.737 63.158 0.00 0.00 0.00 3.01
6186 11776 2.031674 ATGCAGGACCGCGATGATGA 62.032 55.000 8.23 0.00 33.35 2.92
6187 11777 1.563435 GATGCAGGACCGCGATGATG 61.563 60.000 8.23 1.85 33.35 3.07
6208 11798 2.047443 GCGGTTCTCCTCCTCGTCT 61.047 63.158 0.00 0.00 0.00 4.18
6222 11812 3.171388 GGGGAGGATGGATGCGGT 61.171 66.667 0.00 0.00 0.00 5.68
6223 11813 4.320456 CGGGGAGGATGGATGCGG 62.320 72.222 0.00 0.00 0.00 5.69
6232 11822 2.044252 CGAGAAGGTCGGGGAGGA 60.044 66.667 0.00 0.00 45.58 3.71
6243 11833 2.202810 GGCGCTCCTTCCGAGAAG 60.203 66.667 7.64 6.66 41.63 2.85
6271 11864 0.619255 TCGGGTCCTTGATGGCCTTA 60.619 55.000 3.32 0.00 34.05 2.69
6278 11871 1.079127 CGTTGCTCGGGTCCTTGAT 60.079 57.895 0.00 0.00 35.71 2.57
6356 11949 3.132824 TCATCTATCTCGCACCACAACAT 59.867 43.478 0.00 0.00 0.00 2.71
6401 13539 3.329386 TGCTTCTTTGATCTTGACTCGG 58.671 45.455 0.00 0.00 0.00 4.63
6438 14309 7.391148 AACAATCTCTCTCTCTAGTCTTGAC 57.609 40.000 0.00 0.00 0.00 3.18
6563 20270 0.834687 AGACCCGGTGCAACTCCTAA 60.835 55.000 0.00 0.00 36.74 2.69
6565 20272 2.526873 AGACCCGGTGCAACTCCT 60.527 61.111 0.00 0.00 36.74 3.69
6566 20273 2.358737 CAGACCCGGTGCAACTCC 60.359 66.667 0.00 0.00 36.74 3.85
6576 20283 0.521291 TACGTCCGTAAACAGACCCG 59.479 55.000 0.00 0.00 0.00 5.28
6649 20386 3.985279 TGTGCACAGAGAAACGTGTATAC 59.015 43.478 17.42 0.00 35.51 1.47
6650 20387 4.245845 TGTGCACAGAGAAACGTGTATA 57.754 40.909 17.42 0.00 35.51 1.47
6651 20388 3.106242 TGTGCACAGAGAAACGTGTAT 57.894 42.857 17.42 0.00 35.51 2.29
6652 20389 2.588027 TGTGCACAGAGAAACGTGTA 57.412 45.000 17.42 0.00 35.51 2.90
6653 20390 1.953559 ATGTGCACAGAGAAACGTGT 58.046 45.000 25.84 0.49 35.51 4.49
6654 20391 3.002656 AGAAATGTGCACAGAGAAACGTG 59.997 43.478 25.84 0.00 36.18 4.49
6655 20392 3.206150 AGAAATGTGCACAGAGAAACGT 58.794 40.909 25.84 2.15 0.00 3.99
6695 20432 1.017387 GTTCATCCTCATGCCGAACC 58.983 55.000 0.00 0.00 31.82 3.62
6697 20434 2.027285 TGAAGTTCATCCTCATGCCGAA 60.027 45.455 0.08 0.00 0.00 4.30
6698 20435 1.554617 TGAAGTTCATCCTCATGCCGA 59.445 47.619 0.08 0.00 0.00 5.54
6699 20436 1.667724 GTGAAGTTCATCCTCATGCCG 59.332 52.381 9.18 0.00 0.00 5.69
6700 20437 2.019984 GGTGAAGTTCATCCTCATGCC 58.980 52.381 9.18 0.00 0.00 4.40
6704 20482 2.907892 AGGAGGTGAAGTTCATCCTCA 58.092 47.619 32.57 6.39 41.86 3.86
6731 20509 1.202076 GCCGCTCTAGCAAAATCACAC 60.202 52.381 2.44 0.00 42.21 3.82
6777 20592 2.811431 CCCGAAGTAAAACATGAGTGCA 59.189 45.455 0.00 0.00 0.00 4.57
6779 20594 3.435671 GGTCCCGAAGTAAAACATGAGTG 59.564 47.826 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.