Multiple sequence alignment - TraesCS4B01G331400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G331400 chr4B 100.000 8357 0 0 1 8357 621952360 621944004 0.000000e+00 15433.0
1 TraesCS4B01G331400 chr4B 79.806 3615 603 88 2383 5944 622778887 622782427 0.000000e+00 2514.0
2 TraesCS4B01G331400 chr4B 77.343 1611 274 56 6014 7578 622782464 622784029 0.000000e+00 869.0
3 TraesCS4B01G331400 chr4B 78.492 1260 241 23 5629 6880 673098129 673099366 0.000000e+00 798.0
4 TraesCS4B01G331400 chr4B 84.035 808 104 16 4578 5379 673097112 673097900 0.000000e+00 754.0
5 TraesCS4B01G331400 chr4B 75.742 1348 273 45 2963 4279 673095505 673096829 5.510000e-176 628.0
6 TraesCS4B01G331400 chr4B 92.093 430 33 1 7645 8074 621847947 621847519 9.280000e-169 604.0
7 TraesCS4B01G331400 chr4B 89.885 435 37 5 7642 8074 621866319 621865890 3.410000e-153 553.0
8 TraesCS4B01G331400 chr4B 83.120 468 64 11 435 898 622777262 622777718 6.040000e-111 412.0
9 TraesCS4B01G331400 chr4B 92.188 192 15 0 7883 8074 621869430 621869239 1.070000e-68 272.0
10 TraesCS4B01G331400 chr5A 88.342 4452 428 50 187 4586 667716962 667712550 0.000000e+00 5262.0
11 TraesCS4B01G331400 chr5A 91.304 2093 166 9 5561 7651 667711498 667709420 0.000000e+00 2843.0
12 TraesCS4B01G331400 chr5A 79.170 3615 619 99 2383 5942 668894544 668898079 0.000000e+00 2381.0
13 TraesCS4B01G331400 chr5A 92.917 960 54 9 4585 5532 667712455 667711498 0.000000e+00 1384.0
14 TraesCS4B01G331400 chr5A 83.354 799 101 18 4578 5364 707059423 707058645 0.000000e+00 710.0
15 TraesCS4B01G331400 chr5A 78.007 1164 215 34 435 1583 668892971 668894108 0.000000e+00 693.0
16 TraesCS4B01G331400 chr5A 92.620 271 19 1 8074 8343 688155307 688155037 1.020000e-103 388.0
17 TraesCS4B01G331400 chr4D 95.383 2339 100 4 4558 6888 486963584 486961246 0.000000e+00 3714.0
18 TraesCS4B01G331400 chr4D 94.559 2279 116 7 2286 4562 486975648 486973376 0.000000e+00 3515.0
19 TraesCS4B01G331400 chr4D 92.774 2145 134 12 97 2226 486977814 486975676 0.000000e+00 3083.0
20 TraesCS4B01G331400 chr4D 93.506 770 46 3 6882 7650 486952769 486952003 0.000000e+00 1142.0
21 TraesCS4B01G331400 chr7B 83.383 3027 416 55 3901 6897 231705609 231708578 0.000000e+00 2723.0
22 TraesCS4B01G331400 chr7B 79.929 1415 206 48 100 1492 231701986 231703344 0.000000e+00 968.0
23 TraesCS4B01G331400 chr7B 84.523 995 133 17 2860 3837 231704596 231705586 0.000000e+00 965.0
24 TraesCS4B01G331400 chr7B 84.013 613 78 12 7039 7639 231708753 231709357 9.410000e-159 571.0
25 TraesCS4B01G331400 chr7B 84.722 432 61 5 2364 2792 231704126 231704555 2.160000e-115 427.0
26 TraesCS4B01G331400 chr7B 94.737 38 2 0 1708 1745 612601370 612601333 9.060000e-05 60.2
27 TraesCS4B01G331400 chr7A 83.339 3025 420 51 3901 6897 272949999 272952967 0.000000e+00 2717.0
28 TraesCS4B01G331400 chr7A 84.300 1000 135 18 2856 3837 272948971 272949966 0.000000e+00 957.0
29 TraesCS4B01G331400 chr7A 79.505 1415 213 47 99 1493 272946531 272947888 0.000000e+00 935.0
30 TraesCS4B01G331400 chr7A 84.013 613 78 12 7039 7639 272953143 272953747 9.410000e-159 571.0
31 TraesCS4B01G331400 chr7A 84.954 432 60 5 2364 2792 272948506 272948935 4.630000e-117 433.0
32 TraesCS4B01G331400 chr7A 90.526 285 24 3 8075 8357 539646986 539647269 2.850000e-99 374.0
33 TraesCS4B01G331400 chr7D 83.339 3025 418 53 3901 6897 254380826 254383792 0.000000e+00 2715.0
34 TraesCS4B01G331400 chr7D 82.620 1496 203 39 2364 3837 254379333 254380793 0.000000e+00 1269.0
35 TraesCS4B01G331400 chr7D 79.533 1412 208 48 100 1492 254377364 254378713 0.000000e+00 931.0
36 TraesCS4B01G331400 chr7D 84.013 613 78 11 7039 7639 254383968 254384572 9.410000e-159 571.0
37 TraesCS4B01G331400 chr4A 77.402 2456 439 86 2953 5369 628955288 628952910 0.000000e+00 1354.0
38 TraesCS4B01G331400 chr4A 76.751 1299 256 32 5608 6886 628952557 628951285 0.000000e+00 684.0
39 TraesCS4B01G331400 chr4A 94.574 258 14 0 7644 7901 643110904 643111161 4.700000e-107 399.0
40 TraesCS4B01G331400 chr4A 95.565 248 11 0 7650 7897 615435279 615435032 1.690000e-106 398.0
41 TraesCS4B01G331400 chr4A 85.434 357 44 7 2390 2741 628955852 628955499 1.710000e-96 364.0
42 TraesCS4B01G331400 chr4A 94.444 36 2 0 1705 1740 601254022 601254057 1.000000e-03 56.5
43 TraesCS4B01G331400 chr5B 76.542 2464 473 78 2940 5369 681037991 681040383 0.000000e+00 1251.0
44 TraesCS4B01G331400 chr5B 77.725 1257 246 26 5643 6886 681040772 681042007 0.000000e+00 739.0
45 TraesCS4B01G331400 chr5B 85.423 343 46 4 2401 2741 681037450 681037790 3.710000e-93 353.0
46 TraesCS4B01G331400 chr5B 94.444 36 1 1 1711 1745 61199585 61199550 4.000000e-03 54.7
47 TraesCS4B01G331400 chrUn 78.725 1255 230 31 5643 6886 99103182 99101954 0.000000e+00 804.0
48 TraesCS4B01G331400 chrUn 83.709 798 106 13 4578 5369 99104212 99103433 0.000000e+00 732.0
49 TraesCS4B01G331400 chrUn 74.785 1626 325 63 2953 4526 99105825 99104233 0.000000e+00 652.0
50 TraesCS4B01G331400 chrUn 92.193 269 19 2 8075 8342 68315919 68316186 6.120000e-101 379.0
51 TraesCS4B01G331400 chr2A 76.209 1034 210 28 5643 6661 481139652 481140664 1.610000e-141 514.0
52 TraesCS4B01G331400 chr6B 96.078 255 10 0 7643 7897 347227141 347227395 4.670000e-112 416.0
53 TraesCS4B01G331400 chr6B 91.228 285 22 3 8075 8357 667038306 667038023 1.320000e-102 385.0
54 TraesCS4B01G331400 chr1A 92.982 285 18 2 8075 8357 555478344 555478628 1.680000e-111 414.0
55 TraesCS4B01G331400 chr1A 91.103 281 19 5 8074 8352 47841225 47840949 7.920000e-100 375.0
56 TraesCS4B01G331400 chr1A 88.889 54 4 2 1688 1740 313265301 313265353 1.950000e-06 65.8
57 TraesCS4B01G331400 chr2D 96.016 251 10 0 7647 7897 541547539 541547289 7.810000e-110 409.0
58 TraesCS4B01G331400 chr2D 100.000 33 0 0 1708 1740 501307091 501307123 2.520000e-05 62.1
59 TraesCS4B01G331400 chr5D 95.635 252 11 0 7647 7898 418294294 418294043 1.010000e-108 405.0
60 TraesCS4B01G331400 chr5D 94.841 252 13 0 7646 7897 486284813 486285064 2.190000e-105 394.0
61 TraesCS4B01G331400 chr5D 91.606 274 21 2 8071 8343 548301109 548301381 2.200000e-100 377.0
62 TraesCS4B01G331400 chr3D 95.276 254 12 0 7644 7897 269465496 269465749 3.630000e-108 403.0
63 TraesCS4B01G331400 chr3D 92.000 275 20 2 8075 8348 45295662 45295389 1.320000e-102 385.0
64 TraesCS4B01G331400 chr3D 100.000 33 0 0 1708 1740 219573752 219573720 2.520000e-05 62.1
65 TraesCS4B01G331400 chr3D 94.286 35 2 0 1707 1741 439546218 439546252 4.000000e-03 54.7
66 TraesCS4B01G331400 chr1B 90.909 286 22 4 8075 8357 10220423 10220707 1.700000e-101 381.0
67 TraesCS4B01G331400 chr3A 97.368 38 1 0 1708 1745 711454 711417 1.950000e-06 65.8
68 TraesCS4B01G331400 chr3A 100.000 33 0 0 1708 1740 259332082 259332050 2.520000e-05 62.1
69 TraesCS4B01G331400 chr3B 100.000 33 0 0 1708 1740 293746885 293746853 2.520000e-05 62.1
70 TraesCS4B01G331400 chr3B 97.222 36 0 1 1706 1741 576183221 576183255 9.060000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G331400 chr4B 621944004 621952360 8356 True 15433.000000 15433 100.000000 1 8357 1 chr4B.!!$R2 8356
1 TraesCS4B01G331400 chr4B 622777262 622784029 6767 False 1265.000000 2514 80.089667 435 7578 3 chr4B.!!$F1 7143
2 TraesCS4B01G331400 chr4B 673095505 673099366 3861 False 726.666667 798 79.423000 2963 6880 3 chr4B.!!$F2 3917
3 TraesCS4B01G331400 chr4B 621865890 621869430 3540 True 412.500000 553 91.036500 7642 8074 2 chr4B.!!$R3 432
4 TraesCS4B01G331400 chr5A 667709420 667716962 7542 True 3163.000000 5262 90.854333 187 7651 3 chr5A.!!$R3 7464
5 TraesCS4B01G331400 chr5A 668892971 668898079 5108 False 1537.000000 2381 78.588500 435 5942 2 chr5A.!!$F1 5507
6 TraesCS4B01G331400 chr5A 707058645 707059423 778 True 710.000000 710 83.354000 4578 5364 1 chr5A.!!$R2 786
7 TraesCS4B01G331400 chr4D 486961246 486963584 2338 True 3714.000000 3714 95.383000 4558 6888 1 chr4D.!!$R2 2330
8 TraesCS4B01G331400 chr4D 486973376 486977814 4438 True 3299.000000 3515 93.666500 97 4562 2 chr4D.!!$R3 4465
9 TraesCS4B01G331400 chr4D 486952003 486952769 766 True 1142.000000 1142 93.506000 6882 7650 1 chr4D.!!$R1 768
10 TraesCS4B01G331400 chr7B 231701986 231709357 7371 False 1130.800000 2723 83.314000 100 7639 5 chr7B.!!$F1 7539
11 TraesCS4B01G331400 chr7A 272946531 272953747 7216 False 1122.600000 2717 83.222200 99 7639 5 chr7A.!!$F2 7540
12 TraesCS4B01G331400 chr7D 254377364 254384572 7208 False 1371.500000 2715 82.376250 100 7639 4 chr7D.!!$F1 7539
13 TraesCS4B01G331400 chr4A 628951285 628955852 4567 True 800.666667 1354 79.862333 2390 6886 3 chr4A.!!$R2 4496
14 TraesCS4B01G331400 chr5B 681037450 681042007 4557 False 781.000000 1251 79.896667 2401 6886 3 chr5B.!!$F1 4485
15 TraesCS4B01G331400 chrUn 99101954 99105825 3871 True 729.333333 804 79.073000 2953 6886 3 chrUn.!!$R1 3933
16 TraesCS4B01G331400 chr2A 481139652 481140664 1012 False 514.000000 514 76.209000 5643 6661 1 chr2A.!!$F1 1018

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
20 21 2.983229 GTGATCACATGCAGTTCTCCT 58.017 47.619 21.07 0.00 0.00 3.69 F
530 547 4.018324 TGACACTTCTTCTAGGAGCTCCTA 60.018 45.833 35.03 35.03 46.48 2.94 F
1849 1965 0.740737 GGGCCAATGACATACTGCAC 59.259 55.000 4.39 0.00 0.00 4.57 F
2243 2476 1.152510 GACACACACACACACACACA 58.847 50.000 0.00 0.00 0.00 3.72 F
2244 2477 1.737236 GACACACACACACACACACAT 59.263 47.619 0.00 0.00 0.00 3.21 F
3554 3825 2.128771 TTGGCTATGCACCTTCCTTC 57.871 50.000 0.00 0.00 0.00 3.46 F
3954 4246 1.549203 GTTGCAGTGGGATGTTGGAT 58.451 50.000 0.00 0.00 0.00 3.41 F
4484 4794 3.575687 CCTGTTTCAGCCTCTTTCCATTT 59.424 43.478 0.00 0.00 0.00 2.32 F
5132 5550 0.624500 ATGGTGGGTATGGCAGGAGT 60.625 55.000 0.00 0.00 0.00 3.85 F
5136 5554 0.828022 TGGGTATGGCAGGAGTAACG 59.172 55.000 0.00 0.00 0.00 3.18 F
5707 6304 2.289819 TGGTTCATTAGGTCCGTTGTCC 60.290 50.000 0.00 0.00 0.00 4.02 F
7056 7736 3.965379 TTTGTCCATGCCTAACGTAGA 57.035 42.857 0.00 0.00 0.00 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1077 1146 1.068333 ACTTTGTTGATGCGACCATGC 60.068 47.619 0.00 0.00 0.00 4.06 R
2223 2456 1.270571 TGTGTGTGTGTGTGTGTGTCT 60.271 47.619 0.00 0.00 0.00 3.41 R
2743 2979 3.444034 TCCCTTGTCACGAGAGTTGATAG 59.556 47.826 0.00 0.00 46.40 2.08 R
3929 4220 1.683365 ATCCCACTGCAACCATGGC 60.683 57.895 13.04 0.00 31.66 4.40 R
3954 4246 3.052329 TGTGCATAGGTGAATGGGGATA 58.948 45.455 0.00 0.00 0.00 2.59 R
4454 4764 0.595095 GGCTGAAACAGGAGCACAAG 59.405 55.000 0.00 0.00 36.90 3.16 R
4942 5353 5.451908 TCTTTCATGAGATTTGACGTTTGC 58.548 37.500 0.00 0.00 0.00 3.68 R
6134 6738 1.202989 TGTTTCCATAGGCAAGCCACA 60.203 47.619 14.40 3.99 38.92 4.17 R
6771 7385 2.712627 TGCCACTGTCATCATCCCATAT 59.287 45.455 0.00 0.00 0.00 1.78 R
7033 7713 5.250200 TCTACGTTAGGCATGGACAAAATT 58.750 37.500 0.00 0.00 0.00 1.82 R
7165 7846 0.982852 AGCTCCATCCGATCACCCAA 60.983 55.000 0.00 0.00 0.00 4.12 R
7928 8617 0.035056 ACTGGGTTCAGCATGGTAGC 60.035 55.000 0.00 0.00 44.59 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.983229 GTGATCACATGCAGTTCTCCT 58.017 47.619 21.07 0.00 0.00 3.69
21 22 4.128925 GTGATCACATGCAGTTCTCCTA 57.871 45.455 21.07 0.00 0.00 2.94
22 23 4.701765 GTGATCACATGCAGTTCTCCTAT 58.298 43.478 21.07 0.00 0.00 2.57
24 25 6.462500 GTGATCACATGCAGTTCTCCTATAT 58.538 40.000 21.07 0.00 0.00 0.86
25 26 6.368243 GTGATCACATGCAGTTCTCCTATATG 59.632 42.308 21.07 0.00 0.00 1.78
26 27 6.268387 TGATCACATGCAGTTCTCCTATATGA 59.732 38.462 0.00 0.00 0.00 2.15
28 29 7.071069 TCACATGCAGTTCTCCTATATGATT 57.929 36.000 0.00 0.00 0.00 2.57
29 30 7.157347 TCACATGCAGTTCTCCTATATGATTC 58.843 38.462 0.00 0.00 0.00 2.52
31 32 7.443272 CACATGCAGTTCTCCTATATGATTCAA 59.557 37.037 0.00 0.00 0.00 2.69
32 33 7.994911 ACATGCAGTTCTCCTATATGATTCAAA 59.005 33.333 0.00 0.00 0.00 2.69
34 35 8.806429 TGCAGTTCTCCTATATGATTCAAAAA 57.194 30.769 0.00 0.00 0.00 1.94
61 62 5.378230 ACATCTCTAGCATCCATTTTCCA 57.622 39.130 0.00 0.00 0.00 3.53
62 63 5.374921 ACATCTCTAGCATCCATTTTCCAG 58.625 41.667 0.00 0.00 0.00 3.86
63 64 4.428294 TCTCTAGCATCCATTTTCCAGG 57.572 45.455 0.00 0.00 0.00 4.45
64 65 4.040047 TCTCTAGCATCCATTTTCCAGGA 58.960 43.478 0.00 0.00 38.50 3.86
65 66 4.102210 TCTCTAGCATCCATTTTCCAGGAG 59.898 45.833 0.00 0.00 37.34 3.69
71 72 4.889409 GCATCCATTTTCCAGGAGTTGATA 59.111 41.667 0.00 0.00 37.34 2.15
72 73 5.360714 GCATCCATTTTCCAGGAGTTGATAA 59.639 40.000 0.00 0.00 37.34 1.75
73 74 6.127366 GCATCCATTTTCCAGGAGTTGATAAA 60.127 38.462 0.00 0.00 37.34 1.40
74 75 7.579339 GCATCCATTTTCCAGGAGTTGATAAAA 60.579 37.037 0.00 0.00 37.34 1.52
78 79 6.702716 TTTTCCAGGAGTTGATAAAAACGT 57.297 33.333 0.00 0.00 35.13 3.99
79 80 6.702716 TTTCCAGGAGTTGATAAAAACGTT 57.297 33.333 0.00 0.00 35.13 3.99
81 82 5.369833 TCCAGGAGTTGATAAAAACGTTCA 58.630 37.500 0.00 0.00 35.13 3.18
82 83 6.001460 TCCAGGAGTTGATAAAAACGTTCAT 58.999 36.000 0.00 0.00 35.13 2.57
83 84 7.162761 TCCAGGAGTTGATAAAAACGTTCATA 58.837 34.615 0.00 0.00 35.13 2.15
84 85 7.662258 TCCAGGAGTTGATAAAAACGTTCATAA 59.338 33.333 0.00 0.00 35.13 1.90
85 86 7.962918 CCAGGAGTTGATAAAAACGTTCATAAG 59.037 37.037 0.00 0.00 35.13 1.73
86 87 8.504005 CAGGAGTTGATAAAAACGTTCATAAGT 58.496 33.333 0.00 0.00 35.13 2.24
87 88 9.063615 AGGAGTTGATAAAAACGTTCATAAGTT 57.936 29.630 0.00 0.00 35.13 2.66
222 231 8.245491 CACAAATCACATTGAGAACCATCATTA 58.755 33.333 0.00 0.00 34.38 1.90
530 547 4.018324 TGACACTTCTTCTAGGAGCTCCTA 60.018 45.833 35.03 35.03 46.48 2.94
601 618 5.844004 TCTTCTTTGAAGGTAGACTGTGTC 58.156 41.667 7.37 0.00 0.00 3.67
790 811 6.436261 CCAATATGATCTTCACAATGCTGAC 58.564 40.000 0.00 0.00 0.00 3.51
899 920 7.223971 CGTGTGCTACTGGTGTTACATATATTT 59.776 37.037 0.00 0.00 0.00 1.40
1128 1197 6.102663 AGATCTTGACTCGTTTATGAAGGTG 58.897 40.000 0.00 0.00 0.00 4.00
1427 1499 4.096382 AGCCACAATCGGTAAGCATTTTAG 59.904 41.667 0.00 0.00 31.96 1.85
1516 1591 5.465724 CCACGACTTTAGGCATACTAATTCC 59.534 44.000 0.00 0.00 41.13 3.01
1640 1745 4.080129 ACTGGCCTCATAGATCAACACAAT 60.080 41.667 3.32 0.00 0.00 2.71
1647 1752 8.677300 GCCTCATAGATCAACACAATTCTTTTA 58.323 33.333 0.00 0.00 0.00 1.52
1658 1763 8.389603 CAACACAATTCTTTTATGCACACTTTT 58.610 29.630 0.00 0.00 0.00 2.27
1741 1846 8.824756 TTCCTTGTTGATATGAGTAGTCTACT 57.175 34.615 12.50 12.50 42.86 2.57
1831 1946 8.147704 ACAAGGAAAACAATATTTTGGTAGTGG 58.852 33.333 0.89 0.00 37.15 4.00
1846 1962 2.425143 AGTGGGCCAATGACATACTG 57.575 50.000 8.40 0.00 0.00 2.74
1849 1965 0.740737 GGGCCAATGACATACTGCAC 59.259 55.000 4.39 0.00 0.00 4.57
1886 2009 3.871594 GGTGAACTCCATATTGTTCTCCG 59.128 47.826 13.56 0.00 42.74 4.63
1984 2113 7.527568 AATCACCATCCGTAAAAGGTAAAAA 57.472 32.000 0.00 0.00 32.01 1.94
2087 2216 7.329226 CACTTGTTTCATGATGAAATTGGTACC 59.671 37.037 21.91 4.43 46.55 3.34
2204 2437 7.813331 TCTACACTACTAGAAGGTATCCACAT 58.187 38.462 0.00 0.00 0.00 3.21
2211 2444 7.136822 ACTAGAAGGTATCCACATTGCAATA 57.863 36.000 12.53 0.00 0.00 1.90
2212 2445 7.573710 ACTAGAAGGTATCCACATTGCAATAA 58.426 34.615 12.53 0.00 0.00 1.40
2228 2461 5.938883 GCAATAAGCTGCATTTAAGACAC 57.061 39.130 1.02 0.00 42.17 3.67
2229 2462 5.401550 GCAATAAGCTGCATTTAAGACACA 58.598 37.500 1.02 0.00 42.17 3.72
2230 2463 5.287035 GCAATAAGCTGCATTTAAGACACAC 59.713 40.000 1.02 0.00 42.17 3.82
2231 2464 6.380995 CAATAAGCTGCATTTAAGACACACA 58.619 36.000 1.02 0.00 0.00 3.72
2232 2465 3.904136 AGCTGCATTTAAGACACACAC 57.096 42.857 1.02 0.00 0.00 3.82
2233 2466 3.213506 AGCTGCATTTAAGACACACACA 58.786 40.909 1.02 0.00 0.00 3.72
2235 2468 3.243035 GCTGCATTTAAGACACACACACA 60.243 43.478 0.00 0.00 0.00 3.72
2236 2469 4.282068 CTGCATTTAAGACACACACACAC 58.718 43.478 0.00 0.00 0.00 3.82
2237 2470 3.691609 TGCATTTAAGACACACACACACA 59.308 39.130 0.00 0.00 0.00 3.72
2238 2471 4.035017 GCATTTAAGACACACACACACAC 58.965 43.478 0.00 0.00 0.00 3.82
2239 2472 4.438065 GCATTTAAGACACACACACACACA 60.438 41.667 0.00 0.00 0.00 3.72
2240 2473 4.671880 TTTAAGACACACACACACACAC 57.328 40.909 0.00 0.00 0.00 3.82
2242 2475 1.438651 AGACACACACACACACACAC 58.561 50.000 0.00 0.00 0.00 3.82
2243 2476 1.152510 GACACACACACACACACACA 58.847 50.000 0.00 0.00 0.00 3.72
2244 2477 1.737236 GACACACACACACACACACAT 59.263 47.619 0.00 0.00 0.00 3.21
2245 2478 2.933260 GACACACACACACACACACATA 59.067 45.455 0.00 0.00 0.00 2.29
2246 2479 3.540617 ACACACACACACACACACATAT 58.459 40.909 0.00 0.00 0.00 1.78
2570 2805 5.192927 TGGATCTCACCATGGTTATTTCAC 58.807 41.667 16.84 3.92 34.77 3.18
2654 2889 7.586349 AGGTCAAATTGTATATCATGGTCCTT 58.414 34.615 0.00 0.00 0.00 3.36
2675 2911 7.752686 GTCCTTGAGAAAATGCTATCAGTTTTC 59.247 37.037 0.00 0.00 40.14 2.29
2743 2979 7.171630 TGATTTCCTTCAAGAGGTACTAGAC 57.828 40.000 0.00 0.00 46.39 2.59
3042 3310 8.189119 TCAATACTGGCCAATAAAGAAGTTTT 57.811 30.769 7.01 0.00 0.00 2.43
3101 3369 2.669670 CGAAGATAGCCTCTACATGCCG 60.670 54.545 0.00 0.00 32.41 5.69
3296 3567 6.858993 CGGTTTTCCTTCGAACAAATATGAAA 59.141 34.615 0.00 0.00 37.95 2.69
3554 3825 2.128771 TTGGCTATGCACCTTCCTTC 57.871 50.000 0.00 0.00 0.00 3.46
3568 3842 3.052793 CCTTCCTTCCTCAGGTACTCCTA 60.053 52.174 0.00 0.00 44.37 2.94
3617 3892 5.975344 CACAATGCTTGAATAGGCTGTAATG 59.025 40.000 0.00 0.00 0.00 1.90
3954 4246 1.549203 GTTGCAGTGGGATGTTGGAT 58.451 50.000 0.00 0.00 0.00 3.41
4433 4743 5.127845 TGCAAGAACCACAAAATTGGAACTA 59.872 36.000 0.00 0.00 39.24 2.24
4451 4761 8.301252 TGGAACTAGCAATACATCAACTAGTA 57.699 34.615 0.00 0.00 41.96 1.82
4464 4774 5.546621 TCAACTAGTAAACTTGTGCTCCT 57.453 39.130 0.00 0.00 32.55 3.69
4484 4794 3.575687 CCTGTTTCAGCCTCTTTCCATTT 59.424 43.478 0.00 0.00 0.00 2.32
4486 4796 5.200368 TGTTTCAGCCTCTTTCCATTTTC 57.800 39.130 0.00 0.00 0.00 2.29
4562 4872 5.839262 TCGTGCCATATTAAATAGAAGCG 57.161 39.130 0.00 0.00 0.00 4.68
4564 4874 6.448852 TCGTGCCATATTAAATAGAAGCGTA 58.551 36.000 0.00 0.00 0.00 4.42
4570 4880 8.936864 GCCATATTAAATAGAAGCGTACATTCT 58.063 33.333 13.25 13.25 40.13 2.40
4648 5054 5.280499 TCTTCCACCAGGAGATGATTAAGA 58.720 41.667 0.00 0.00 46.74 2.10
4658 5064 8.381636 CCAGGAGATGATTAAGAATGGAGTATT 58.618 37.037 0.00 0.00 0.00 1.89
4894 5305 5.687166 AAACGATATTCACTCCCCTAACA 57.313 39.130 0.00 0.00 0.00 2.41
5132 5550 0.624500 ATGGTGGGTATGGCAGGAGT 60.625 55.000 0.00 0.00 0.00 3.85
5136 5554 0.828022 TGGGTATGGCAGGAGTAACG 59.172 55.000 0.00 0.00 0.00 3.18
5420 5889 7.712205 ACAACATGAAGAAAGAAAAAGAATGGG 59.288 33.333 0.00 0.00 0.00 4.00
5445 5915 6.073058 GCATGTGATGTTAAGACTGAAAGACA 60.073 38.462 0.00 0.00 37.43 3.41
5707 6304 2.289819 TGGTTCATTAGGTCCGTTGTCC 60.290 50.000 0.00 0.00 0.00 4.02
5740 6337 9.838339 ATGATCAACTATTTCGAGGTAAGATTT 57.162 29.630 0.00 0.00 0.00 2.17
5753 6350 8.974238 TCGAGGTAAGATTTCCTAATAGTGAAA 58.026 33.333 6.46 6.46 35.17 2.69
5872 6471 4.850680 TGGGTATTGGACATAAGTTCACC 58.149 43.478 0.00 0.00 31.39 4.02
5993 6595 7.765695 TCTTGCTAAATTCTTTGAGGAACAT 57.234 32.000 0.00 0.00 0.00 2.71
6134 6738 8.297470 ACTGGCAGAATTTTATGACACAATAT 57.703 30.769 23.66 0.00 31.40 1.28
6177 6781 4.685169 AGATGTGCATACTGGAAAAACG 57.315 40.909 0.00 0.00 0.00 3.60
6326 6934 7.428282 TGCAAACTTATCACGTCTCAATTTA 57.572 32.000 0.00 0.00 0.00 1.40
6681 7295 4.650754 AGTACTCGTATTTGCCTCGATT 57.349 40.909 0.00 0.00 33.26 3.34
6699 7313 6.070767 CCTCGATTGTATACCCAATGATAGGT 60.071 42.308 0.00 0.00 40.31 3.08
6771 7385 7.552459 TGCTAAGCTTCATGTATTACACACTA 58.448 34.615 0.00 0.00 40.86 2.74
7052 7732 4.804108 TGAAATTTTGTCCATGCCTAACG 58.196 39.130 0.00 0.00 0.00 3.18
7055 7735 5.560966 AATTTTGTCCATGCCTAACGTAG 57.439 39.130 0.00 0.00 0.00 3.51
7056 7736 3.965379 TTTGTCCATGCCTAACGTAGA 57.035 42.857 0.00 0.00 0.00 2.59
7057 7737 3.965379 TTGTCCATGCCTAACGTAGAA 57.035 42.857 0.00 0.00 0.00 2.10
7165 7846 1.003580 ACGGGCTCATGTTCTCACAAT 59.996 47.619 0.00 0.00 36.16 2.71
7264 7945 0.179097 CCTTGAGGCTCGCTACTTCC 60.179 60.000 10.42 0.00 0.00 3.46
7349 8030 2.143122 CAAGCACCTAAAGTTCGAGCA 58.857 47.619 1.01 0.00 0.00 4.26
7379 8060 4.260375 GCGCAGACTGATTGAATAACGAAT 60.260 41.667 6.65 0.00 0.00 3.34
7462 8143 4.273235 CACTCAGTCACAAATTAGCACACA 59.727 41.667 0.00 0.00 0.00 3.72
7579 8266 7.312154 TGTTGTTATAGCAATGTTGATGAACC 58.688 34.615 5.24 0.00 0.00 3.62
7701 8390 3.532641 AGGGGCAGATCCAATTAATCC 57.467 47.619 0.00 0.00 36.21 3.01
7727 8416 5.454187 GGCCATCAAATCATGTCAATCCAAT 60.454 40.000 0.00 0.00 0.00 3.16
7749 8438 4.183865 TGACCTAGATTGCTTCAATGTCG 58.816 43.478 0.00 0.00 33.90 4.35
7751 8440 4.437239 ACCTAGATTGCTTCAATGTCGAG 58.563 43.478 0.00 0.00 33.90 4.04
7753 8442 1.662629 AGATTGCTTCAATGTCGAGCG 59.337 47.619 0.00 0.00 39.23 5.03
7754 8443 0.097674 ATTGCTTCAATGTCGAGCGC 59.902 50.000 0.00 0.00 39.23 5.92
7755 8444 0.950555 TTGCTTCAATGTCGAGCGCT 60.951 50.000 11.27 11.27 39.23 5.92
7756 8445 1.346538 GCTTCAATGTCGAGCGCTC 59.653 57.895 27.64 27.64 0.00 5.03
7757 8446 1.354337 GCTTCAATGTCGAGCGCTCA 61.354 55.000 34.69 18.66 0.00 4.26
7758 8447 1.070821 CTTCAATGTCGAGCGCTCAA 58.929 50.000 34.69 17.41 0.00 3.02
7759 8448 0.790207 TTCAATGTCGAGCGCTCAAC 59.210 50.000 34.69 28.50 0.00 3.18
7762 8451 0.723414 AATGTCGAGCGCTCAACATG 59.277 50.000 37.10 21.43 0.00 3.21
7768 8457 1.527793 CGAGCGCTCAACATGTTTAGC 60.528 52.381 34.69 27.50 36.68 3.09
7782 8471 5.856455 ACATGTTTAGCGTGCAGTTAATTTC 59.144 36.000 0.00 0.00 37.62 2.17
7795 8484 8.971321 GTGCAGTTAATTTCATGCCAAATATAG 58.029 33.333 0.00 0.00 37.89 1.31
7798 8487 8.971321 CAGTTAATTTCATGCCAAATATAGTGC 58.029 33.333 0.00 0.00 0.00 4.40
7908 8597 1.136690 TGACTAGTTCAGCGCAAACG 58.863 50.000 11.47 4.71 44.07 3.60
7919 8608 0.442310 GCGCAAACGTCTAGCATCAA 59.558 50.000 0.30 0.00 42.83 2.57
7921 8610 1.061131 CGCAAACGTCTAGCATCAAGG 59.939 52.381 7.46 0.00 33.53 3.61
7928 8617 3.119291 CGTCTAGCATCAAGGCTTGTAG 58.881 50.000 25.39 18.79 42.71 2.74
7945 8634 1.209504 GTAGCTACCATGCTGAACCCA 59.790 52.381 13.20 0.00 43.87 4.51
7959 8648 3.142951 TGAACCCAGTTTGATTGGTACG 58.857 45.455 0.00 0.00 33.73 3.67
7963 8652 1.876799 CCAGTTTGATTGGTACGCACA 59.123 47.619 0.00 0.00 0.00 4.57
7964 8653 2.095768 CCAGTTTGATTGGTACGCACAG 60.096 50.000 0.00 0.00 0.00 3.66
7968 8657 0.953471 TGATTGGTACGCACAGCCAC 60.953 55.000 0.00 0.00 31.19 5.01
7994 8683 0.101759 GCGGTCATGATGCAAGCATT 59.898 50.000 15.61 0.00 42.55 3.56
8017 8706 0.321671 CCAGAGTGGTGTCGGTGAAT 59.678 55.000 0.00 0.00 31.35 2.57
8021 8710 1.798813 GAGTGGTGTCGGTGAATCAAC 59.201 52.381 0.00 0.00 0.00 3.18
8031 8720 3.564027 GAATCAACGAGCCGCCCG 61.564 66.667 0.00 0.00 0.00 6.13
8074 8763 4.809426 CCTATACACCGATTCTGTCCAAAC 59.191 45.833 0.00 0.00 0.00 2.93
8075 8764 2.631160 ACACCGATTCTGTCCAAACA 57.369 45.000 0.00 0.00 0.00 2.83
8076 8765 2.218603 ACACCGATTCTGTCCAAACAC 58.781 47.619 0.00 0.00 0.00 3.32
8077 8766 2.158813 ACACCGATTCTGTCCAAACACT 60.159 45.455 0.00 0.00 0.00 3.55
8078 8767 3.070446 ACACCGATTCTGTCCAAACACTA 59.930 43.478 0.00 0.00 0.00 2.74
8079 8768 3.432252 CACCGATTCTGTCCAAACACTAC 59.568 47.826 0.00 0.00 0.00 2.73
8080 8769 3.323979 ACCGATTCTGTCCAAACACTACT 59.676 43.478 0.00 0.00 0.00 2.57
8081 8770 4.525487 ACCGATTCTGTCCAAACACTACTA 59.475 41.667 0.00 0.00 0.00 1.82
8082 8771 5.103000 CCGATTCTGTCCAAACACTACTAG 58.897 45.833 0.00 0.00 0.00 2.57
8083 8772 5.103000 CGATTCTGTCCAAACACTACTAGG 58.897 45.833 0.00 0.00 0.00 3.02
8084 8773 4.884668 TTCTGTCCAAACACTACTAGGG 57.115 45.455 0.00 0.00 0.00 3.53
8085 8774 4.122337 TCTGTCCAAACACTACTAGGGA 57.878 45.455 0.00 0.00 0.00 4.20
8086 8775 4.485875 TCTGTCCAAACACTACTAGGGAA 58.514 43.478 0.00 0.00 0.00 3.97
8087 8776 4.903049 TCTGTCCAAACACTACTAGGGAAA 59.097 41.667 0.00 0.00 0.00 3.13
8088 8777 5.367352 TCTGTCCAAACACTACTAGGGAAAA 59.633 40.000 0.00 0.00 0.00 2.29
8089 8778 5.617252 TGTCCAAACACTACTAGGGAAAAG 58.383 41.667 0.00 0.00 0.00 2.27
8090 8779 4.454847 GTCCAAACACTACTAGGGAAAAGC 59.545 45.833 0.00 0.00 0.00 3.51
8091 8780 4.349930 TCCAAACACTACTAGGGAAAAGCT 59.650 41.667 0.00 0.00 0.00 3.74
8092 8781 5.070685 CCAAACACTACTAGGGAAAAGCTT 58.929 41.667 0.00 0.00 0.00 3.74
8093 8782 6.043474 TCCAAACACTACTAGGGAAAAGCTTA 59.957 38.462 0.00 0.00 0.00 3.09
8094 8783 6.884836 CCAAACACTACTAGGGAAAAGCTTAT 59.115 38.462 0.00 0.00 0.00 1.73
8095 8784 8.044908 CCAAACACTACTAGGGAAAAGCTTATA 58.955 37.037 0.00 0.00 0.00 0.98
8096 8785 9.099454 CAAACACTACTAGGGAAAAGCTTATAG 57.901 37.037 0.00 0.49 0.00 1.31
8097 8786 7.362802 ACACTACTAGGGAAAAGCTTATAGG 57.637 40.000 0.00 0.00 0.00 2.57
8098 8787 6.901857 ACACTACTAGGGAAAAGCTTATAGGT 59.098 38.462 0.00 0.00 0.00 3.08
8099 8788 8.063770 ACACTACTAGGGAAAAGCTTATAGGTA 58.936 37.037 0.00 0.00 0.00 3.08
8100 8789 8.578151 CACTACTAGGGAAAAGCTTATAGGTAG 58.422 40.741 0.00 8.88 0.00 3.18
8101 8790 8.509441 ACTACTAGGGAAAAGCTTATAGGTAGA 58.491 37.037 18.51 4.14 0.00 2.59
8102 8791 7.600231 ACTAGGGAAAAGCTTATAGGTAGAC 57.400 40.000 0.00 0.00 0.00 2.59
8103 8792 5.532664 AGGGAAAAGCTTATAGGTAGACG 57.467 43.478 0.00 0.00 0.00 4.18
8104 8793 4.056740 GGGAAAAGCTTATAGGTAGACGC 58.943 47.826 0.00 0.00 0.00 5.19
8105 8794 4.202233 GGGAAAAGCTTATAGGTAGACGCT 60.202 45.833 0.00 0.00 0.00 5.07
8106 8795 5.358090 GGAAAAGCTTATAGGTAGACGCTT 58.642 41.667 0.00 0.00 39.16 4.68
8107 8796 6.462067 GGGAAAAGCTTATAGGTAGACGCTTA 60.462 42.308 0.00 0.00 36.78 3.09
8108 8797 6.420306 GGAAAAGCTTATAGGTAGACGCTTAC 59.580 42.308 0.00 0.00 36.78 2.34
8109 8798 6.712179 AAAGCTTATAGGTAGACGCTTACT 57.288 37.500 0.00 0.00 36.78 2.24
8110 8799 7.814264 AAAGCTTATAGGTAGACGCTTACTA 57.186 36.000 0.00 0.00 36.78 1.82
8111 8800 7.437793 AAGCTTATAGGTAGACGCTTACTAG 57.562 40.000 0.00 0.00 36.10 2.57
8112 8801 6.532826 AGCTTATAGGTAGACGCTTACTAGT 58.467 40.000 0.00 0.00 0.00 2.57
8113 8802 7.675062 AGCTTATAGGTAGACGCTTACTAGTA 58.325 38.462 0.00 0.00 0.00 1.82
8114 8803 7.818930 AGCTTATAGGTAGACGCTTACTAGTAG 59.181 40.741 2.23 0.00 0.00 2.57
8115 8804 7.412891 GCTTATAGGTAGACGCTTACTAGTAGC 60.413 44.444 2.23 8.21 0.00 3.58
8119 8808 4.207203 CGCTTACTAGTAGCGCGG 57.793 61.111 27.39 16.08 44.91 6.46
8120 8809 1.370172 CGCTTACTAGTAGCGCGGG 60.370 63.158 27.39 13.42 44.91 6.13
8121 8810 1.732308 GCTTACTAGTAGCGCGGGT 59.268 57.895 8.83 0.19 0.00 5.28
8122 8811 0.101939 GCTTACTAGTAGCGCGGGTT 59.898 55.000 8.83 0.00 0.00 4.11
8123 8812 1.470458 GCTTACTAGTAGCGCGGGTTT 60.470 52.381 8.83 0.00 0.00 3.27
8124 8813 2.223572 GCTTACTAGTAGCGCGGGTTTA 60.224 50.000 8.83 0.00 0.00 2.01
8125 8814 3.551659 GCTTACTAGTAGCGCGGGTTTAT 60.552 47.826 8.83 0.00 0.00 1.40
8126 8815 4.320494 GCTTACTAGTAGCGCGGGTTTATA 60.320 45.833 8.83 0.00 0.00 0.98
8127 8816 3.632855 ACTAGTAGCGCGGGTTTATAC 57.367 47.619 8.83 0.00 0.00 1.47
8128 8817 2.294512 ACTAGTAGCGCGGGTTTATACC 59.705 50.000 8.83 0.00 44.22 2.73
8139 8828 2.463876 GGTTTATACCCGTCGTACTGC 58.536 52.381 0.00 0.00 38.60 4.40
8140 8829 2.099756 GGTTTATACCCGTCGTACTGCT 59.900 50.000 0.00 0.00 38.60 4.24
8141 8830 3.315191 GGTTTATACCCGTCGTACTGCTA 59.685 47.826 0.00 0.00 38.60 3.49
8142 8831 4.202010 GGTTTATACCCGTCGTACTGCTAA 60.202 45.833 0.00 0.00 38.60 3.09
8143 8832 5.507985 GGTTTATACCCGTCGTACTGCTAAT 60.508 44.000 0.00 0.00 38.60 1.73
8144 8833 5.772825 TTATACCCGTCGTACTGCTAATT 57.227 39.130 0.00 0.00 0.00 1.40
8145 8834 6.875948 TTATACCCGTCGTACTGCTAATTA 57.124 37.500 0.00 0.00 0.00 1.40
8146 8835 3.427161 ACCCGTCGTACTGCTAATTAC 57.573 47.619 0.00 0.00 0.00 1.89
8147 8836 3.019564 ACCCGTCGTACTGCTAATTACT 58.980 45.455 0.00 0.00 0.00 2.24
8148 8837 4.199310 ACCCGTCGTACTGCTAATTACTA 58.801 43.478 0.00 0.00 0.00 1.82
8149 8838 4.274459 ACCCGTCGTACTGCTAATTACTAG 59.726 45.833 0.00 0.00 0.00 2.57
8150 8839 4.274459 CCCGTCGTACTGCTAATTACTAGT 59.726 45.833 0.00 0.00 0.00 2.57
8151 8840 5.466728 CCCGTCGTACTGCTAATTACTAGTA 59.533 44.000 0.00 0.00 0.00 1.82
8152 8841 6.347240 CCCGTCGTACTGCTAATTACTAGTAG 60.347 46.154 2.23 0.00 43.86 2.57
8153 8842 6.070196 CGTCGTACTGCTAATTACTAGTAGC 58.930 44.000 8.20 8.20 45.65 3.58
8158 8847 2.593257 GCTAATTACTAGTAGCGCGGG 58.407 52.381 8.83 0.00 38.08 6.13
8159 8848 2.030451 GCTAATTACTAGTAGCGCGGGT 60.030 50.000 8.83 0.19 38.08 5.28
8160 8849 3.551659 GCTAATTACTAGTAGCGCGGGTT 60.552 47.826 8.83 0.00 38.08 4.11
8161 8850 3.531934 AATTACTAGTAGCGCGGGTTT 57.468 42.857 8.83 0.00 0.00 3.27
8162 8851 4.654091 AATTACTAGTAGCGCGGGTTTA 57.346 40.909 8.83 0.00 0.00 2.01
8163 8852 4.861102 ATTACTAGTAGCGCGGGTTTAT 57.139 40.909 8.83 0.00 0.00 1.40
8164 8853 5.964958 ATTACTAGTAGCGCGGGTTTATA 57.035 39.130 8.83 0.00 0.00 0.98
8165 8854 3.632855 ACTAGTAGCGCGGGTTTATAC 57.367 47.619 8.83 0.00 0.00 1.47
8166 8855 2.294512 ACTAGTAGCGCGGGTTTATACC 59.705 50.000 8.83 0.00 44.22 2.73
8182 8871 8.828688 GGTTTATACCCATTGCTACTACTAAG 57.171 38.462 0.00 0.00 38.60 2.18
8183 8872 8.427276 GGTTTATACCCATTGCTACTACTAAGT 58.573 37.037 0.00 0.00 38.60 2.24
8184 8873 9.828039 GTTTATACCCATTGCTACTACTAAGTT 57.172 33.333 0.00 0.00 37.15 2.66
8185 8874 9.826574 TTTATACCCATTGCTACTACTAAGTTG 57.173 33.333 0.00 0.00 37.15 3.16
8186 8875 7.670605 ATACCCATTGCTACTACTAAGTTGA 57.329 36.000 0.00 0.00 37.15 3.18
8187 8876 6.561519 ACCCATTGCTACTACTAAGTTGAT 57.438 37.500 0.00 0.00 37.15 2.57
8188 8877 7.670605 ACCCATTGCTACTACTAAGTTGATA 57.329 36.000 0.00 0.00 37.15 2.15
8189 8878 7.727181 ACCCATTGCTACTACTAAGTTGATAG 58.273 38.462 0.00 0.00 37.15 2.08
8190 8879 7.344871 ACCCATTGCTACTACTAAGTTGATAGT 59.655 37.037 6.24 6.24 39.41 2.12
8191 8880 8.857098 CCCATTGCTACTACTAAGTTGATAGTA 58.143 37.037 7.49 7.49 37.34 1.82
8199 8888 5.093169 ACTAAGTTGATAGTAGTAGCGCG 57.907 43.478 0.00 0.00 34.40 6.86
8200 8889 3.351020 AAGTTGATAGTAGTAGCGCGG 57.649 47.619 8.83 0.00 0.00 6.46
8201 8890 1.607628 AGTTGATAGTAGTAGCGCGGG 59.392 52.381 8.83 0.00 0.00 6.13
8202 8891 1.336125 GTTGATAGTAGTAGCGCGGGT 59.664 52.381 8.83 0.00 0.00 5.28
8203 8892 1.683943 TGATAGTAGTAGCGCGGGTT 58.316 50.000 8.83 0.00 0.00 4.11
8204 8893 2.026641 TGATAGTAGTAGCGCGGGTTT 58.973 47.619 8.83 0.00 0.00 3.27
8205 8894 3.213506 TGATAGTAGTAGCGCGGGTTTA 58.786 45.455 8.83 0.00 0.00 2.01
8206 8895 3.822735 TGATAGTAGTAGCGCGGGTTTAT 59.177 43.478 8.83 0.00 0.00 1.40
8207 8896 5.003160 TGATAGTAGTAGCGCGGGTTTATA 58.997 41.667 8.83 0.00 0.00 0.98
8208 8897 3.632855 AGTAGTAGCGCGGGTTTATAC 57.367 47.619 8.83 0.00 0.00 1.47
8209 8898 2.294512 AGTAGTAGCGCGGGTTTATACC 59.705 50.000 8.83 0.00 44.22 2.73
8222 8911 5.883685 GGTTTATACCCCTTGCTACTACT 57.116 43.478 0.00 0.00 38.60 2.57
8223 8912 6.983906 GGTTTATACCCCTTGCTACTACTA 57.016 41.667 0.00 0.00 38.60 1.82
8224 8913 7.365497 GGTTTATACCCCTTGCTACTACTAA 57.635 40.000 0.00 0.00 38.60 2.24
8225 8914 7.440198 GGTTTATACCCCTTGCTACTACTAAG 58.560 42.308 0.00 0.00 38.60 2.18
8226 8915 7.070447 GGTTTATACCCCTTGCTACTACTAAGT 59.930 40.741 0.00 0.00 38.60 2.24
8227 8916 7.592885 TTATACCCCTTGCTACTACTAAGTG 57.407 40.000 0.00 0.00 36.36 3.16
8228 8917 3.105283 ACCCCTTGCTACTACTAAGTGG 58.895 50.000 0.00 0.00 36.36 4.00
8229 8918 3.105283 CCCCTTGCTACTACTAAGTGGT 58.895 50.000 0.00 0.00 36.62 4.16
8230 8919 3.118738 CCCCTTGCTACTACTAAGTGGTG 60.119 52.174 0.00 0.00 36.62 4.17
8231 8920 3.514309 CCCTTGCTACTACTAAGTGGTGT 59.486 47.826 0.00 0.00 36.62 4.16
8232 8921 4.381718 CCCTTGCTACTACTAAGTGGTGTC 60.382 50.000 0.00 0.00 36.62 3.67
8233 8922 4.463186 CCTTGCTACTACTAAGTGGTGTCT 59.537 45.833 0.00 0.00 36.62 3.41
8234 8923 5.651139 CCTTGCTACTACTAAGTGGTGTCTA 59.349 44.000 0.00 0.00 36.62 2.59
8235 8924 6.404513 CCTTGCTACTACTAAGTGGTGTCTAC 60.405 46.154 0.00 0.00 36.62 2.59
8244 8933 4.091939 GGTGTCTACCGTGCCCCC 62.092 72.222 0.00 0.00 37.19 5.40
8245 8934 3.315949 GTGTCTACCGTGCCCCCA 61.316 66.667 0.00 0.00 0.00 4.96
8246 8935 3.000819 TGTCTACCGTGCCCCCAG 61.001 66.667 0.00 0.00 0.00 4.45
8247 8936 3.782443 GTCTACCGTGCCCCCAGG 61.782 72.222 0.00 0.00 0.00 4.45
8259 8948 3.672913 CCCAGGGGACATGCCATA 58.327 61.111 0.00 0.00 38.95 2.74
8260 8949 1.457604 CCCAGGGGACATGCCATAG 59.542 63.158 0.00 0.00 38.95 2.23
8261 8950 1.355718 CCCAGGGGACATGCCATAGT 61.356 60.000 0.00 0.00 38.95 2.12
8262 8951 1.434188 CCAGGGGACATGCCATAGTA 58.566 55.000 8.20 0.00 38.95 1.82
8263 8952 1.349026 CCAGGGGACATGCCATAGTAG 59.651 57.143 8.20 0.00 38.95 2.57
8264 8953 2.050144 CAGGGGACATGCCATAGTAGT 58.950 52.381 8.20 0.00 38.95 2.73
8265 8954 3.239449 CAGGGGACATGCCATAGTAGTA 58.761 50.000 8.20 0.00 38.95 1.82
8266 8955 3.259374 CAGGGGACATGCCATAGTAGTAG 59.741 52.174 8.20 0.00 38.95 2.57
8267 8956 2.028020 GGGGACATGCCATAGTAGTAGC 60.028 54.545 8.20 0.00 38.95 3.58
8268 8957 2.352814 GGGACATGCCATAGTAGTAGCG 60.353 54.545 8.20 0.00 38.95 4.26
8269 8958 2.557056 GGACATGCCATAGTAGTAGCGA 59.443 50.000 0.00 0.00 36.34 4.93
8270 8959 3.366476 GGACATGCCATAGTAGTAGCGAG 60.366 52.174 0.00 0.00 36.34 5.03
8271 8960 2.558795 ACATGCCATAGTAGTAGCGAGG 59.441 50.000 0.00 0.00 0.00 4.63
8272 8961 1.617322 TGCCATAGTAGTAGCGAGGG 58.383 55.000 0.00 0.00 0.00 4.30
8273 8962 0.889306 GCCATAGTAGTAGCGAGGGG 59.111 60.000 0.00 0.00 0.00 4.79
8274 8963 1.822457 GCCATAGTAGTAGCGAGGGGT 60.822 57.143 0.00 0.00 0.00 4.95
8275 8964 2.553904 GCCATAGTAGTAGCGAGGGGTA 60.554 54.545 0.00 0.00 0.00 3.69
8276 8965 3.876945 GCCATAGTAGTAGCGAGGGGTAT 60.877 52.174 0.00 0.00 0.00 2.73
8277 8966 4.627255 GCCATAGTAGTAGCGAGGGGTATA 60.627 50.000 0.00 0.00 0.00 1.47
8278 8967 5.692928 CCATAGTAGTAGCGAGGGGTATAT 58.307 45.833 0.00 0.00 0.00 0.86
8279 8968 6.689946 GCCATAGTAGTAGCGAGGGGTATATA 60.690 46.154 0.00 0.00 0.00 0.86
8280 8969 6.709846 CCATAGTAGTAGCGAGGGGTATATAC 59.290 46.154 4.14 4.14 0.00 1.47
8281 8970 5.109500 AGTAGTAGCGAGGGGTATATACC 57.891 47.826 21.88 21.88 45.71 2.73
8296 8985 7.313951 GGTATATACCCACGCTACTACTAAG 57.686 44.000 19.76 0.00 40.53 2.18
8297 8986 6.881602 GGTATATACCCACGCTACTACTAAGT 59.118 42.308 19.76 0.00 40.53 2.24
8298 8987 7.391833 GGTATATACCCACGCTACTACTAAGTT 59.608 40.741 19.76 0.00 40.53 2.66
8299 8988 3.863142 ACCCACGCTACTACTAAGTTG 57.137 47.619 0.00 0.00 37.15 3.16
8300 8989 3.424703 ACCCACGCTACTACTAAGTTGA 58.575 45.455 0.00 0.00 37.15 3.18
8301 8990 4.021916 ACCCACGCTACTACTAAGTTGAT 58.978 43.478 0.00 0.00 37.15 2.57
8302 8991 5.195940 ACCCACGCTACTACTAAGTTGATA 58.804 41.667 0.00 0.00 37.15 2.15
8303 8992 5.298777 ACCCACGCTACTACTAAGTTGATAG 59.701 44.000 0.00 0.00 37.15 2.08
8304 8993 5.298777 CCCACGCTACTACTAAGTTGATAGT 59.701 44.000 6.24 6.24 39.41 2.12
8305 8994 6.484643 CCCACGCTACTACTAAGTTGATAGTA 59.515 42.308 7.49 7.49 37.34 1.82
8313 9002 5.093169 ACTAAGTTGATAGTAGTAGCGCG 57.907 43.478 0.00 0.00 34.40 6.86
8314 9003 3.351020 AAGTTGATAGTAGTAGCGCGG 57.649 47.619 8.83 0.00 0.00 6.46
8315 9004 1.607628 AGTTGATAGTAGTAGCGCGGG 59.392 52.381 8.83 0.00 0.00 6.13
8316 9005 1.336125 GTTGATAGTAGTAGCGCGGGT 59.664 52.381 8.83 0.00 0.00 5.28
8317 9006 1.683943 TGATAGTAGTAGCGCGGGTT 58.316 50.000 8.83 0.00 0.00 4.11
8318 9007 2.026641 TGATAGTAGTAGCGCGGGTTT 58.973 47.619 8.83 0.00 0.00 3.27
8319 9008 3.213506 TGATAGTAGTAGCGCGGGTTTA 58.786 45.455 8.83 0.00 0.00 2.01
8320 9009 3.822735 TGATAGTAGTAGCGCGGGTTTAT 59.177 43.478 8.83 0.00 0.00 1.40
8321 9010 5.003160 TGATAGTAGTAGCGCGGGTTTATA 58.997 41.667 8.83 0.00 0.00 0.98
8322 9011 3.632855 AGTAGTAGCGCGGGTTTATAC 57.367 47.619 8.83 0.00 0.00 1.47
8323 9012 3.217626 AGTAGTAGCGCGGGTTTATACT 58.782 45.455 8.83 5.04 0.00 2.12
8324 9013 2.789491 AGTAGCGCGGGTTTATACTC 57.211 50.000 8.83 0.00 0.00 2.59
8325 9014 1.339291 AGTAGCGCGGGTTTATACTCC 59.661 52.381 8.83 0.00 0.00 3.85
8326 9015 1.339291 GTAGCGCGGGTTTATACTCCT 59.661 52.381 8.83 0.00 0.00 3.69
8327 9016 1.696063 AGCGCGGGTTTATACTCCTA 58.304 50.000 8.83 0.00 0.00 2.94
8328 9017 2.245582 AGCGCGGGTTTATACTCCTAT 58.754 47.619 8.83 0.00 0.00 2.57
8329 9018 2.230750 AGCGCGGGTTTATACTCCTATC 59.769 50.000 8.83 0.00 0.00 2.08
8330 9019 2.230750 GCGCGGGTTTATACTCCTATCT 59.769 50.000 8.83 0.00 0.00 1.98
8331 9020 3.441572 GCGCGGGTTTATACTCCTATCTA 59.558 47.826 8.83 0.00 0.00 1.98
8332 9021 4.673841 GCGCGGGTTTATACTCCTATCTAC 60.674 50.000 8.83 0.00 0.00 2.59
8333 9022 4.699257 CGCGGGTTTATACTCCTATCTACT 59.301 45.833 0.00 0.00 0.00 2.57
8334 9023 5.877012 CGCGGGTTTATACTCCTATCTACTA 59.123 44.000 0.00 0.00 0.00 1.82
8335 9024 6.183360 CGCGGGTTTATACTCCTATCTACTAC 60.183 46.154 0.00 0.00 0.00 2.73
8336 9025 6.883756 GCGGGTTTATACTCCTATCTACTACT 59.116 42.308 0.00 0.00 0.00 2.57
8337 9026 8.043710 GCGGGTTTATACTCCTATCTACTACTA 58.956 40.741 0.00 0.00 0.00 1.82
8338 9027 9.950496 CGGGTTTATACTCCTATCTACTACTAA 57.050 37.037 0.00 0.00 0.00 2.24
8347 9036 8.947305 ACTCCTATCTACTACTAAGTACATGGT 58.053 37.037 0.00 0.00 37.15 3.55
8348 9037 9.796180 CTCCTATCTACTACTAAGTACATGGTT 57.204 37.037 0.00 0.00 37.15 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.983229 AGGAGAACTGCATGTGATCAC 58.017 47.619 19.27 19.27 0.00 3.06
1 2 6.268387 TCATATAGGAGAACTGCATGTGATCA 59.732 38.462 0.00 0.00 0.00 2.92
2 3 6.695429 TCATATAGGAGAACTGCATGTGATC 58.305 40.000 0.00 0.00 0.00 2.92
5 6 6.932960 TGAATCATATAGGAGAACTGCATGTG 59.067 38.462 0.00 0.00 0.00 3.21
6 7 7.071069 TGAATCATATAGGAGAACTGCATGT 57.929 36.000 0.00 0.00 0.00 3.21
7 8 7.974482 TTGAATCATATAGGAGAACTGCATG 57.026 36.000 0.00 0.00 0.00 4.06
8 9 8.985315 TTTTGAATCATATAGGAGAACTGCAT 57.015 30.769 0.00 0.00 0.00 3.96
9 10 8.806429 TTTTTGAATCATATAGGAGAACTGCA 57.194 30.769 0.00 0.00 0.00 4.41
34 35 8.854117 GGAAAATGGATGCTAGAGATGTAAATT 58.146 33.333 0.00 0.00 0.00 1.82
35 36 8.000709 TGGAAAATGGATGCTAGAGATGTAAAT 58.999 33.333 0.00 0.00 0.00 1.40
36 37 7.345691 TGGAAAATGGATGCTAGAGATGTAAA 58.654 34.615 0.00 0.00 0.00 2.01
37 38 6.899089 TGGAAAATGGATGCTAGAGATGTAA 58.101 36.000 0.00 0.00 0.00 2.41
38 39 6.464892 CCTGGAAAATGGATGCTAGAGATGTA 60.465 42.308 0.00 0.00 0.00 2.29
39 40 5.374921 CTGGAAAATGGATGCTAGAGATGT 58.625 41.667 0.00 0.00 0.00 3.06
41 42 4.662179 TCCTGGAAAATGGATGCTAGAGAT 59.338 41.667 0.00 0.00 0.00 2.75
43 44 4.141528 ACTCCTGGAAAATGGATGCTAGAG 60.142 45.833 0.00 0.00 0.00 2.43
45 46 4.162040 ACTCCTGGAAAATGGATGCTAG 57.838 45.455 0.00 0.00 0.00 3.42
46 47 4.018506 TCAACTCCTGGAAAATGGATGCTA 60.019 41.667 0.00 0.00 0.00 3.49
47 48 3.094572 CAACTCCTGGAAAATGGATGCT 58.905 45.455 0.00 0.00 0.00 3.79
48 49 3.091545 TCAACTCCTGGAAAATGGATGC 58.908 45.455 0.00 0.00 0.00 3.91
49 50 7.408756 TTTATCAACTCCTGGAAAATGGATG 57.591 36.000 0.00 0.00 0.00 3.51
50 51 8.314021 GTTTTTATCAACTCCTGGAAAATGGAT 58.686 33.333 0.00 0.00 0.00 3.41
51 52 7.523052 CGTTTTTATCAACTCCTGGAAAATGGA 60.523 37.037 0.00 0.00 0.00 3.41
52 53 6.586082 CGTTTTTATCAACTCCTGGAAAATGG 59.414 38.462 0.00 0.00 0.00 3.16
53 54 7.145323 ACGTTTTTATCAACTCCTGGAAAATG 58.855 34.615 0.00 1.22 31.86 2.32
54 55 7.284919 ACGTTTTTATCAACTCCTGGAAAAT 57.715 32.000 0.00 0.00 0.00 1.82
55 56 6.702716 ACGTTTTTATCAACTCCTGGAAAA 57.297 33.333 0.00 0.00 0.00 2.29
57 58 5.823570 TGAACGTTTTTATCAACTCCTGGAA 59.176 36.000 0.46 0.00 0.00 3.53
58 59 5.369833 TGAACGTTTTTATCAACTCCTGGA 58.630 37.500 0.46 0.00 0.00 3.86
59 60 5.682943 TGAACGTTTTTATCAACTCCTGG 57.317 39.130 0.46 0.00 0.00 4.45
61 62 8.617290 ACTTATGAACGTTTTTATCAACTCCT 57.383 30.769 0.46 0.00 0.00 3.69
62 63 9.673454 AAACTTATGAACGTTTTTATCAACTCC 57.327 29.630 0.46 0.00 29.65 3.85
72 73 9.673454 GTCTGGAAATAAACTTATGAACGTTTT 57.327 29.630 0.46 0.00 35.25 2.43
73 74 8.294577 GGTCTGGAAATAAACTTATGAACGTTT 58.705 33.333 0.46 0.00 37.19 3.60
74 75 7.446013 TGGTCTGGAAATAAACTTATGAACGTT 59.554 33.333 0.00 0.00 0.00 3.99
82 83 9.137459 TGTCATTTTGGTCTGGAAATAAACTTA 57.863 29.630 0.00 0.00 0.00 2.24
83 84 8.017418 TGTCATTTTGGTCTGGAAATAAACTT 57.983 30.769 0.00 0.00 0.00 2.66
84 85 7.595819 TGTCATTTTGGTCTGGAAATAAACT 57.404 32.000 0.00 0.00 0.00 2.66
85 86 8.711457 CATTGTCATTTTGGTCTGGAAATAAAC 58.289 33.333 0.00 0.00 0.00 2.01
86 87 7.387397 GCATTGTCATTTTGGTCTGGAAATAAA 59.613 33.333 0.00 0.00 0.00 1.40
87 88 6.873076 GCATTGTCATTTTGGTCTGGAAATAA 59.127 34.615 0.00 0.00 0.00 1.40
90 91 4.100653 TGCATTGTCATTTTGGTCTGGAAA 59.899 37.500 0.00 0.00 0.00 3.13
91 92 3.640498 TGCATTGTCATTTTGGTCTGGAA 59.360 39.130 0.00 0.00 0.00 3.53
93 94 3.663995 TGCATTGTCATTTTGGTCTGG 57.336 42.857 0.00 0.00 0.00 3.86
95 96 4.561938 CCACATGCATTGTCATTTTGGTCT 60.562 41.667 0.00 0.00 36.00 3.85
104 105 3.155501 TGAATGACCACATGCATTGTCA 58.844 40.909 19.92 19.92 37.16 3.58
147 148 8.783833 ACATCTGGATTTAGACATACATATGC 57.216 34.615 1.58 0.00 37.19 3.14
236 245 6.919662 GTGAATATGTTGCCAATTCCTACATG 59.080 38.462 10.77 0.00 32.47 3.21
336 345 7.853299 TGGTTTAGTAATAAGTAGGCACATGA 58.147 34.615 0.00 0.00 0.00 3.07
530 547 4.811969 AAAAAGTTGTTTTCCCGGAACT 57.188 36.364 0.73 0.00 34.64 3.01
601 618 6.716934 AGTGGTTGTAGTGGATAGTAGATG 57.283 41.667 0.00 0.00 0.00 2.90
1017 1084 8.097078 TGGCATTTCCAAACAAGAATTTTATG 57.903 30.769 0.00 0.00 43.21 1.90
1034 1103 3.026694 AGCATCCCTAAAGTGGCATTTC 58.973 45.455 0.00 0.00 0.00 2.17
1077 1146 1.068333 ACTTTGTTGATGCGACCATGC 60.068 47.619 0.00 0.00 0.00 4.06
1310 1382 9.515226 ACAAACCAAGTATCTACATTTACACAT 57.485 29.630 0.00 0.00 0.00 3.21
1608 1713 3.663136 TCTATGAGGCCAGTATAGACCCT 59.337 47.826 5.01 0.00 30.65 4.34
1754 1859 8.816640 TTTGATGGTTTAGCTTTGAATCTTTC 57.183 30.769 0.00 0.00 0.00 2.62
1758 1864 8.084684 AGAACTTTGATGGTTTAGCTTTGAATC 58.915 33.333 0.00 0.00 0.00 2.52
1809 1916 5.872617 GCCCACTACCAAAATATTGTTTTCC 59.127 40.000 0.00 0.00 34.60 3.13
1831 1946 1.462616 TGTGCAGTATGTCATTGGCC 58.537 50.000 0.00 0.00 39.31 5.36
1846 1962 1.886542 ACCCGGAAGAGAAAATTGTGC 59.113 47.619 0.73 0.00 0.00 4.57
1849 1965 3.821033 AGTTCACCCGGAAGAGAAAATTG 59.179 43.478 0.73 0.00 35.82 2.32
1984 2113 7.906327 ACATTTGCTCCACTTATTACCAATTT 58.094 30.769 0.00 0.00 0.00 1.82
2087 2216 7.889469 ACATTATGAATGCCTATAAGCTTTGG 58.111 34.615 3.20 6.37 42.69 3.28
2099 2228 8.986477 AAGTGTTTTCTTACATTATGAATGCC 57.014 30.769 0.00 0.00 42.69 4.40
2115 2244 8.926715 AGTTTTGTTGAATCCTAAGTGTTTTC 57.073 30.769 0.00 0.00 0.00 2.29
2190 2423 5.300286 GCTTATTGCAATGTGGATACCTTCT 59.700 40.000 22.27 0.00 42.31 2.85
2198 2431 2.945447 GCAGCTTATTGCAATGTGGA 57.055 45.000 22.27 0.00 45.94 4.02
2211 2444 3.631686 TGTGTGTGTCTTAAATGCAGCTT 59.368 39.130 0.00 0.00 0.00 3.74
2212 2445 3.003689 GTGTGTGTGTCTTAAATGCAGCT 59.996 43.478 0.00 0.00 0.00 4.24
2223 2456 1.270571 TGTGTGTGTGTGTGTGTGTCT 60.271 47.619 0.00 0.00 0.00 3.41
2225 2458 1.819928 ATGTGTGTGTGTGTGTGTGT 58.180 45.000 0.00 0.00 0.00 3.72
2226 2459 5.861222 ATATATGTGTGTGTGTGTGTGTG 57.139 39.130 0.00 0.00 0.00 3.82
2270 2503 8.959548 TGCCATATCTATAAGCATAATTGGTTG 58.040 33.333 0.97 0.00 43.17 3.77
2272 2505 9.705103 ATTGCCATATCTATAAGCATAATTGGT 57.295 29.630 0.00 0.00 32.67 3.67
2570 2805 2.674380 GGGAGGTGGTTGCAGCAG 60.674 66.667 2.05 0.00 0.00 4.24
2626 2861 7.502226 GGACCATGATATACAATTTGACCTTCA 59.498 37.037 2.79 2.01 0.00 3.02
2629 2864 7.154191 AGGACCATGATATACAATTTGACCT 57.846 36.000 2.79 0.00 0.00 3.85
2675 2911 5.464168 GCATTTGAATCCCATTATTCCGAG 58.536 41.667 0.00 0.00 35.40 4.63
2743 2979 3.444034 TCCCTTGTCACGAGAGTTGATAG 59.556 47.826 0.00 0.00 46.40 2.08
2837 3073 7.174080 TGTTACTTGCTTGTATTAATGCACTCA 59.826 33.333 5.66 4.54 35.01 3.41
2838 3074 7.526608 TGTTACTTGCTTGTATTAATGCACTC 58.473 34.615 5.66 2.04 35.01 3.51
3033 3301 6.944234 ACGAAAGGATTCTGAAAACTTCTT 57.056 33.333 9.43 0.00 33.17 2.52
3042 3310 4.826274 AGGATGAACGAAAGGATTCTGA 57.174 40.909 0.00 0.00 33.17 3.27
3101 3369 6.208599 TCTCCTTGTGTTTTCCCATATTGTTC 59.791 38.462 0.00 0.00 0.00 3.18
3296 3567 5.950758 TGGCGTCAAGTACATTTTTATGT 57.049 34.783 0.00 0.00 38.49 2.29
3365 3636 6.604396 TCATTGCAATCTCAGTCATACCATTT 59.396 34.615 9.53 0.00 0.00 2.32
3876 4167 5.163364 CCAGTGAGGATATTAGCTCAACACT 60.163 44.000 0.00 0.00 41.22 3.55
3929 4220 1.683365 ATCCCACTGCAACCATGGC 60.683 57.895 13.04 0.00 31.66 4.40
3954 4246 3.052329 TGTGCATAGGTGAATGGGGATA 58.948 45.455 0.00 0.00 0.00 2.59
4433 4743 8.721478 CACAAGTTTACTAGTTGATGTATTGCT 58.279 33.333 0.00 0.00 39.15 3.91
4451 4761 2.099756 GCTGAAACAGGAGCACAAGTTT 59.900 45.455 0.00 3.56 36.94 2.66
4454 4764 0.595095 GGCTGAAACAGGAGCACAAG 59.405 55.000 0.00 0.00 36.90 3.16
4464 4774 4.895297 AGAAAATGGAAAGAGGCTGAAACA 59.105 37.500 0.00 0.00 0.00 2.83
4550 4860 9.512435 GTGAGTAGAATGTACGCTTCTATTTAA 57.488 33.333 16.36 6.78 37.50 1.52
4942 5353 5.451908 TCTTTCATGAGATTTGACGTTTGC 58.548 37.500 0.00 0.00 0.00 3.68
5395 5840 7.307573 GCCCATTCTTTTTCTTTCTTCATGTTG 60.308 37.037 0.00 0.00 0.00 3.33
5420 5889 6.073058 TGTCTTTCAGTCTTAACATCACATGC 60.073 38.462 0.00 0.00 0.00 4.06
5707 6304 6.110543 TCGAAATAGTTGATCATGTTGCTG 57.889 37.500 0.00 0.00 0.00 4.41
5872 6471 7.040892 CCACTCCAATATCATATTCTGTTGTGG 60.041 40.741 0.00 0.00 33.11 4.17
5993 6595 5.007823 ACATTTGTCGTGTTATTCGTTTCCA 59.992 36.000 0.00 0.00 0.00 3.53
6124 6728 1.818060 GGCAAGCCACATATTGTGTCA 59.182 47.619 6.14 0.00 46.45 3.58
6126 6730 2.220653 AGGCAAGCCACATATTGTGT 57.779 45.000 14.40 0.00 46.45 3.72
6134 6738 1.202989 TGTTTCCATAGGCAAGCCACA 60.203 47.619 14.40 3.99 38.92 4.17
6197 6801 9.790389 ATTGATACAACAAACGTGTTTAGAAAA 57.210 25.926 0.00 0.00 46.01 2.29
6326 6934 7.643569 TGCACATGAATACCAAGTTATGATT 57.356 32.000 0.00 0.00 0.00 2.57
6681 7295 6.617784 TCTGGAAACCTATCATTGGGTATACA 59.382 38.462 5.01 0.00 35.27 2.29
6699 7313 5.304686 ACTTTACAGTGGTCATCTGGAAA 57.695 39.130 0.00 3.79 41.58 3.13
6771 7385 2.712627 TGCCACTGTCATCATCCCATAT 59.287 45.455 0.00 0.00 0.00 1.78
6897 7511 8.812972 GTGACATGGTTAGGGATATATCAAGTA 58.187 37.037 14.60 0.19 0.00 2.24
6899 7513 7.038017 AGGTGACATGGTTAGGGATATATCAAG 60.038 40.741 14.60 0.00 0.00 3.02
7033 7713 5.250200 TCTACGTTAGGCATGGACAAAATT 58.750 37.500 0.00 0.00 0.00 1.82
7165 7846 0.982852 AGCTCCATCCGATCACCCAA 60.983 55.000 0.00 0.00 0.00 4.12
7253 7934 3.491104 GGTGATAAGGTGGAAGTAGCGAG 60.491 52.174 0.00 0.00 0.00 5.03
7264 7945 2.501723 AGTGCAGGTAGGTGATAAGGTG 59.498 50.000 0.00 0.00 0.00 4.00
7349 8030 2.028112 TCAATCAGTCTGCGCTACCTTT 60.028 45.455 9.73 0.00 0.00 3.11
7454 8135 2.949177 ATCCTTGTGGTTGTGTGCTA 57.051 45.000 0.00 0.00 34.23 3.49
7462 8143 2.041701 AGCAGCAAAATCCTTGTGGTT 58.958 42.857 0.00 0.00 34.23 3.67
7579 8266 9.787532 ACCACATTGTATTTTCTAATTTGATCG 57.212 29.630 0.00 0.00 0.00 3.69
7678 8367 4.039609 GGATTAATTGGATCTGCCCCTTTG 59.960 45.833 0.00 0.00 34.97 2.77
7701 8390 1.391577 TGACATGATTTGATGGCCGG 58.608 50.000 0.00 0.00 29.16 6.13
7727 8416 4.081697 TCGACATTGAAGCAATCTAGGTCA 60.082 41.667 14.91 4.43 42.23 4.02
7736 8425 0.950555 AGCGCTCGACATTGAAGCAA 60.951 50.000 2.64 0.00 0.00 3.91
7749 8438 2.165282 GCTAAACATGTTGAGCGCTC 57.835 50.000 28.15 30.42 37.32 5.03
7753 8442 1.069296 TGCACGCTAAACATGTTGAGC 60.069 47.619 30.88 30.88 42.40 4.26
7754 8443 2.224079 ACTGCACGCTAAACATGTTGAG 59.776 45.455 17.57 17.57 0.00 3.02
7755 8444 2.217750 ACTGCACGCTAAACATGTTGA 58.782 42.857 12.82 3.11 0.00 3.18
7756 8445 2.686558 ACTGCACGCTAAACATGTTG 57.313 45.000 12.82 1.29 0.00 3.33
7757 8446 4.822036 TTAACTGCACGCTAAACATGTT 57.178 36.364 4.92 4.92 0.00 2.71
7758 8447 5.371115 AATTAACTGCACGCTAAACATGT 57.629 34.783 0.00 0.00 0.00 3.21
7759 8448 5.855925 TGAAATTAACTGCACGCTAAACATG 59.144 36.000 0.00 0.00 0.00 3.21
7762 8451 5.220024 GCATGAAATTAACTGCACGCTAAAC 60.220 40.000 0.00 0.00 34.77 2.01
7768 8457 3.214697 TGGCATGAAATTAACTGCACG 57.785 42.857 0.00 0.00 36.34 5.34
7839 8528 7.822161 TTGGAAGTATATTAAGTGCATGCAT 57.178 32.000 25.64 11.73 0.00 3.96
7840 8529 7.637631 TTTGGAAGTATATTAAGTGCATGCA 57.362 32.000 18.46 18.46 0.00 3.96
7908 8597 2.869192 GCTACAAGCCTTGATGCTAGAC 59.131 50.000 12.25 0.00 41.80 2.59
7919 8608 1.134280 CAGCATGGTAGCTACAAGCCT 60.134 52.381 24.75 11.31 44.54 4.58
7921 8610 2.315925 TCAGCATGGTAGCTACAAGC 57.684 50.000 24.75 22.20 44.54 4.01
7928 8617 0.035056 ACTGGGTTCAGCATGGTAGC 60.035 55.000 0.00 0.00 44.59 3.58
7945 8634 1.535462 GCTGTGCGTACCAATCAAACT 59.465 47.619 0.00 0.00 0.00 2.66
7959 8648 3.423154 GCAGGTACGTGGCTGTGC 61.423 66.667 16.75 1.55 0.00 4.57
7994 8683 1.982395 CCGACACCACTCTGGCCTA 60.982 63.158 3.32 0.00 42.67 3.93
8041 8730 1.332997 CGGTGTATAGGGTGACGTCTC 59.667 57.143 17.92 13.38 0.00 3.36
8044 8733 2.062971 ATCGGTGTATAGGGTGACGT 57.937 50.000 0.00 0.00 0.00 4.34
8045 8734 2.621998 AGAATCGGTGTATAGGGTGACG 59.378 50.000 0.00 0.00 0.00 4.35
8054 8743 4.000988 GTGTTTGGACAGAATCGGTGTAT 58.999 43.478 0.00 0.00 36.20 2.29
8074 8763 7.362802 ACCTATAAGCTTTTCCCTAGTAGTG 57.637 40.000 3.20 0.00 0.00 2.74
8075 8764 8.509441 TCTACCTATAAGCTTTTCCCTAGTAGT 58.491 37.037 3.20 0.00 0.00 2.73
8076 8765 8.795513 GTCTACCTATAAGCTTTTCCCTAGTAG 58.204 40.741 3.20 7.65 0.00 2.57
8077 8766 7.446625 CGTCTACCTATAAGCTTTTCCCTAGTA 59.553 40.741 3.20 0.00 0.00 1.82
8078 8767 6.264970 CGTCTACCTATAAGCTTTTCCCTAGT 59.735 42.308 3.20 0.00 0.00 2.57
8079 8768 6.679843 CGTCTACCTATAAGCTTTTCCCTAG 58.320 44.000 3.20 0.00 0.00 3.02
8080 8769 5.010415 GCGTCTACCTATAAGCTTTTCCCTA 59.990 44.000 3.20 0.00 0.00 3.53
8081 8770 4.202233 GCGTCTACCTATAAGCTTTTCCCT 60.202 45.833 3.20 0.00 0.00 4.20
8082 8771 4.056740 GCGTCTACCTATAAGCTTTTCCC 58.943 47.826 3.20 0.00 0.00 3.97
8083 8772 4.946445 AGCGTCTACCTATAAGCTTTTCC 58.054 43.478 3.20 0.00 0.00 3.13
8084 8773 7.201835 AGTAAGCGTCTACCTATAAGCTTTTC 58.798 38.462 3.20 1.41 43.51 2.29
8085 8774 7.110043 AGTAAGCGTCTACCTATAAGCTTTT 57.890 36.000 3.20 0.00 43.51 2.27
8086 8775 6.712179 AGTAAGCGTCTACCTATAAGCTTT 57.288 37.500 3.20 0.00 43.51 3.51
8087 8776 6.997476 ACTAGTAAGCGTCTACCTATAAGCTT 59.003 38.462 3.48 3.48 45.37 3.74
8088 8777 6.532826 ACTAGTAAGCGTCTACCTATAAGCT 58.467 40.000 0.00 0.00 36.40 3.74
8089 8778 6.799926 ACTAGTAAGCGTCTACCTATAAGC 57.200 41.667 0.00 0.00 0.00 3.09
8090 8779 7.201427 CGCTACTAGTAAGCGTCTACCTATAAG 60.201 44.444 25.55 5.99 45.59 1.73
8091 8780 6.587990 CGCTACTAGTAAGCGTCTACCTATAA 59.412 42.308 25.55 0.00 45.59 0.98
8092 8781 6.096036 CGCTACTAGTAAGCGTCTACCTATA 58.904 44.000 25.55 0.00 45.59 1.31
8093 8782 4.928615 CGCTACTAGTAAGCGTCTACCTAT 59.071 45.833 25.55 0.00 45.59 2.57
8094 8783 4.302455 CGCTACTAGTAAGCGTCTACCTA 58.698 47.826 25.55 0.00 45.59 3.08
8095 8784 3.129871 CGCTACTAGTAAGCGTCTACCT 58.870 50.000 25.55 0.00 45.59 3.08
8096 8785 3.518294 CGCTACTAGTAAGCGTCTACC 57.482 52.381 25.55 2.03 45.59 3.18
8103 8792 0.101939 AACCCGCGCTACTAGTAAGC 59.898 55.000 16.04 16.04 0.00 3.09
8104 8793 2.573941 AAACCCGCGCTACTAGTAAG 57.426 50.000 5.56 2.60 0.00 2.34
8105 8794 4.023193 GGTATAAACCCGCGCTACTAGTAA 60.023 45.833 5.56 0.00 40.21 2.24
8106 8795 3.502211 GGTATAAACCCGCGCTACTAGTA 59.498 47.826 5.56 1.89 40.21 1.82
8107 8796 2.294512 GGTATAAACCCGCGCTACTAGT 59.705 50.000 5.56 0.00 40.21 2.57
8108 8797 2.938869 GGTATAAACCCGCGCTACTAG 58.061 52.381 5.56 0.00 40.21 2.57
8110 8799 3.974222 GGTATAAACCCGCGCTACT 57.026 52.632 5.56 0.00 40.21 2.57
8119 8808 2.099756 AGCAGTACGACGGGTATAAACC 59.900 50.000 0.00 0.00 45.97 3.27
8120 8809 3.427161 AGCAGTACGACGGGTATAAAC 57.573 47.619 0.00 0.00 32.74 2.01
8121 8810 5.772825 ATTAGCAGTACGACGGGTATAAA 57.227 39.130 0.00 0.00 32.74 1.40
8122 8811 5.772825 AATTAGCAGTACGACGGGTATAA 57.227 39.130 0.00 0.00 32.74 0.98
8123 8812 5.997746 AGTAATTAGCAGTACGACGGGTATA 59.002 40.000 0.00 0.00 32.74 1.47
8124 8813 4.823989 AGTAATTAGCAGTACGACGGGTAT 59.176 41.667 0.00 0.00 32.74 2.73
8125 8814 4.199310 AGTAATTAGCAGTACGACGGGTA 58.801 43.478 0.00 0.00 0.00 3.69
8126 8815 3.019564 AGTAATTAGCAGTACGACGGGT 58.980 45.455 0.00 0.00 0.00 5.28
8127 8816 3.705043 AGTAATTAGCAGTACGACGGG 57.295 47.619 0.00 0.00 0.00 5.28
8128 8817 5.415415 ACTAGTAATTAGCAGTACGACGG 57.585 43.478 0.00 0.00 32.25 4.79
8129 8818 6.070196 GCTACTAGTAATTAGCAGTACGACG 58.930 44.000 9.95 0.00 40.48 5.12
8130 8819 6.070196 CGCTACTAGTAATTAGCAGTACGAC 58.930 44.000 14.19 0.00 40.75 4.34
8131 8820 5.333645 GCGCTACTAGTAATTAGCAGTACGA 60.334 44.000 14.19 2.52 40.75 3.43
8132 8821 4.845060 GCGCTACTAGTAATTAGCAGTACG 59.155 45.833 14.19 15.14 40.75 3.67
8133 8822 4.845060 CGCGCTACTAGTAATTAGCAGTAC 59.155 45.833 14.19 1.89 40.75 2.73
8134 8823 4.083643 CCGCGCTACTAGTAATTAGCAGTA 60.084 45.833 14.19 6.14 40.75 2.74
8135 8824 3.304525 CCGCGCTACTAGTAATTAGCAGT 60.305 47.826 14.19 4.71 40.75 4.40
8136 8825 3.235195 CCGCGCTACTAGTAATTAGCAG 58.765 50.000 14.19 8.04 40.75 4.24
8137 8826 2.030540 CCCGCGCTACTAGTAATTAGCA 60.031 50.000 14.19 0.00 40.75 3.49
8138 8827 2.030451 ACCCGCGCTACTAGTAATTAGC 60.030 50.000 5.56 4.69 37.87 3.09
8139 8828 3.911661 ACCCGCGCTACTAGTAATTAG 57.088 47.619 5.56 0.00 35.39 1.73
8140 8829 4.654091 AAACCCGCGCTACTAGTAATTA 57.346 40.909 5.56 0.00 0.00 1.40
8141 8830 3.531934 AAACCCGCGCTACTAGTAATT 57.468 42.857 5.56 0.00 0.00 1.40
8142 8831 4.861102 ATAAACCCGCGCTACTAGTAAT 57.139 40.909 5.56 0.00 0.00 1.89
8143 8832 4.023193 GGTATAAACCCGCGCTACTAGTAA 60.023 45.833 5.56 0.00 40.21 2.24
8144 8833 3.502211 GGTATAAACCCGCGCTACTAGTA 59.498 47.826 5.56 1.89 40.21 1.82
8145 8834 2.294512 GGTATAAACCCGCGCTACTAGT 59.705 50.000 5.56 0.00 40.21 2.57
8146 8835 2.938869 GGTATAAACCCGCGCTACTAG 58.061 52.381 5.56 0.00 40.21 2.57
8148 8837 3.974222 GGTATAAACCCGCGCTACT 57.026 52.632 5.56 0.00 40.21 2.57
8157 8846 8.427276 ACTTAGTAGTAGCAATGGGTATAAACC 58.573 37.037 0.00 0.00 37.72 3.27
8158 8847 9.828039 AACTTAGTAGTAGCAATGGGTATAAAC 57.172 33.333 0.00 0.00 33.17 2.01
8159 8848 9.826574 CAACTTAGTAGTAGCAATGGGTATAAA 57.173 33.333 0.00 0.00 33.17 1.40
8160 8849 9.204337 TCAACTTAGTAGTAGCAATGGGTATAA 57.796 33.333 0.00 0.00 33.17 0.98
8161 8850 8.771521 TCAACTTAGTAGTAGCAATGGGTATA 57.228 34.615 0.00 0.00 33.17 1.47
8162 8851 7.670605 TCAACTTAGTAGTAGCAATGGGTAT 57.329 36.000 0.00 0.00 33.17 2.73
8163 8852 7.670605 ATCAACTTAGTAGTAGCAATGGGTA 57.329 36.000 0.00 0.00 33.17 3.69
8164 8853 6.561519 ATCAACTTAGTAGTAGCAATGGGT 57.438 37.500 0.00 0.00 33.17 4.51
8165 8854 7.727181 ACTATCAACTTAGTAGTAGCAATGGG 58.273 38.462 0.00 0.00 33.17 4.00
8166 8855 9.900710 CTACTATCAACTTAGTAGTAGCAATGG 57.099 37.037 7.00 0.00 43.34 3.16
8176 8865 5.178252 CCGCGCTACTACTATCAACTTAGTA 59.822 44.000 5.56 0.00 34.35 1.82
8177 8866 4.024218 CCGCGCTACTACTATCAACTTAGT 60.024 45.833 5.56 0.00 36.43 2.24
8178 8867 4.465016 CCGCGCTACTACTATCAACTTAG 58.535 47.826 5.56 0.00 0.00 2.18
8179 8868 3.251729 CCCGCGCTACTACTATCAACTTA 59.748 47.826 5.56 0.00 0.00 2.24
8180 8869 2.034305 CCCGCGCTACTACTATCAACTT 59.966 50.000 5.56 0.00 0.00 2.66
8181 8870 1.607628 CCCGCGCTACTACTATCAACT 59.392 52.381 5.56 0.00 0.00 3.16
8182 8871 1.336125 ACCCGCGCTACTACTATCAAC 59.664 52.381 5.56 0.00 0.00 3.18
8183 8872 1.683943 ACCCGCGCTACTACTATCAA 58.316 50.000 5.56 0.00 0.00 2.57
8184 8873 1.683943 AACCCGCGCTACTACTATCA 58.316 50.000 5.56 0.00 0.00 2.15
8185 8874 2.789491 AAACCCGCGCTACTACTATC 57.211 50.000 5.56 0.00 0.00 2.08
8186 8875 4.156739 GGTATAAACCCGCGCTACTACTAT 59.843 45.833 5.56 0.00 40.21 2.12
8187 8876 3.502211 GGTATAAACCCGCGCTACTACTA 59.498 47.826 5.56 0.00 40.21 1.82
8188 8877 2.294512 GGTATAAACCCGCGCTACTACT 59.705 50.000 5.56 0.00 40.21 2.57
8189 8878 2.666026 GGTATAAACCCGCGCTACTAC 58.334 52.381 5.56 0.00 40.21 2.73
8191 8880 3.974222 GGTATAAACCCGCGCTACT 57.026 52.632 5.56 0.00 40.21 2.57
8200 8889 5.883685 AGTAGTAGCAAGGGGTATAAACC 57.116 43.478 0.00 0.00 45.97 3.27
8201 8890 7.924947 CACTTAGTAGTAGCAAGGGGTATAAAC 59.075 40.741 0.00 0.00 31.96 2.01
8202 8891 7.070322 CCACTTAGTAGTAGCAAGGGGTATAAA 59.930 40.741 4.41 0.00 37.94 1.40
8203 8892 6.552350 CCACTTAGTAGTAGCAAGGGGTATAA 59.448 42.308 4.41 0.00 37.94 0.98
8204 8893 6.073314 CCACTTAGTAGTAGCAAGGGGTATA 58.927 44.000 4.41 0.00 37.94 1.47
8205 8894 4.900054 CCACTTAGTAGTAGCAAGGGGTAT 59.100 45.833 4.41 0.00 37.94 2.73
8206 8895 4.284178 CCACTTAGTAGTAGCAAGGGGTA 58.716 47.826 4.41 0.00 37.94 3.69
8207 8896 3.105283 CCACTTAGTAGTAGCAAGGGGT 58.895 50.000 4.41 0.00 37.94 4.95
8208 8897 3.105283 ACCACTTAGTAGTAGCAAGGGG 58.895 50.000 9.51 9.51 46.43 4.79
8209 8898 3.514309 ACACCACTTAGTAGTAGCAAGGG 59.486 47.826 0.00 0.00 31.96 3.95
8210 8899 4.463186 AGACACCACTTAGTAGTAGCAAGG 59.537 45.833 0.00 0.00 31.96 3.61
8211 8900 5.646577 AGACACCACTTAGTAGTAGCAAG 57.353 43.478 0.00 0.00 31.96 4.01
8212 8901 5.416952 GGTAGACACCACTTAGTAGTAGCAA 59.583 44.000 0.00 0.00 45.04 3.91
8213 8902 4.946157 GGTAGACACCACTTAGTAGTAGCA 59.054 45.833 0.00 0.00 45.04 3.49
8214 8903 4.034975 CGGTAGACACCACTTAGTAGTAGC 59.965 50.000 0.00 0.00 46.14 3.58
8215 8904 5.064452 CACGGTAGACACCACTTAGTAGTAG 59.936 48.000 0.00 0.00 46.14 2.57
8216 8905 4.937620 CACGGTAGACACCACTTAGTAGTA 59.062 45.833 0.00 0.00 46.14 1.82
8217 8906 3.755378 CACGGTAGACACCACTTAGTAGT 59.245 47.826 0.00 0.00 46.14 2.73
8218 8907 3.427233 GCACGGTAGACACCACTTAGTAG 60.427 52.174 0.00 0.00 46.14 2.57
8219 8908 2.489329 GCACGGTAGACACCACTTAGTA 59.511 50.000 0.00 0.00 46.14 1.82
8220 8909 1.271656 GCACGGTAGACACCACTTAGT 59.728 52.381 0.00 0.00 46.14 2.24
8221 8910 1.403780 GGCACGGTAGACACCACTTAG 60.404 57.143 0.00 0.00 46.14 2.18
8222 8911 0.604578 GGCACGGTAGACACCACTTA 59.395 55.000 0.00 0.00 46.14 2.24
8223 8912 1.370064 GGCACGGTAGACACCACTT 59.630 57.895 0.00 0.00 46.14 3.16
8224 8913 2.580601 GGGCACGGTAGACACCACT 61.581 63.158 0.00 0.00 46.14 4.00
8225 8914 2.047560 GGGCACGGTAGACACCAC 60.048 66.667 0.00 0.00 46.14 4.16
8226 8915 3.315949 GGGGCACGGTAGACACCA 61.316 66.667 0.00 0.00 46.14 4.17
8227 8916 4.091939 GGGGGCACGGTAGACACC 62.092 72.222 0.00 0.00 41.93 4.16
8228 8917 3.310860 CTGGGGGCACGGTAGACAC 62.311 68.421 0.00 0.00 0.00 3.67
8229 8918 3.000819 CTGGGGGCACGGTAGACA 61.001 66.667 0.00 0.00 0.00 3.41
8230 8919 3.782443 CCTGGGGGCACGGTAGAC 61.782 72.222 0.00 0.00 0.00 2.59
8241 8930 2.072874 CTATGGCATGTCCCCTGGGG 62.073 65.000 26.87 26.87 46.11 4.96
8242 8931 1.355718 ACTATGGCATGTCCCCTGGG 61.356 60.000 10.98 5.50 0.00 4.45
8243 8932 1.349026 CTACTATGGCATGTCCCCTGG 59.651 57.143 10.98 0.00 0.00 4.45
8244 8933 2.050144 ACTACTATGGCATGTCCCCTG 58.950 52.381 10.98 0.00 0.00 4.45
8245 8934 2.496679 ACTACTATGGCATGTCCCCT 57.503 50.000 10.98 0.00 0.00 4.79
8246 8935 2.028020 GCTACTACTATGGCATGTCCCC 60.028 54.545 10.98 0.00 0.00 4.81
8247 8936 2.352814 CGCTACTACTATGGCATGTCCC 60.353 54.545 10.98 0.00 0.00 4.46
8248 8937 2.557056 TCGCTACTACTATGGCATGTCC 59.443 50.000 10.98 0.00 0.00 4.02
8249 8938 3.366476 CCTCGCTACTACTATGGCATGTC 60.366 52.174 10.98 0.00 0.00 3.06
8250 8939 2.558795 CCTCGCTACTACTATGGCATGT 59.441 50.000 10.98 8.87 0.00 3.21
8251 8940 2.094494 CCCTCGCTACTACTATGGCATG 60.094 54.545 10.98 2.76 0.00 4.06
8252 8941 2.171840 CCCTCGCTACTACTATGGCAT 58.828 52.381 4.88 4.88 0.00 4.40
8253 8942 1.617322 CCCTCGCTACTACTATGGCA 58.383 55.000 0.00 0.00 0.00 4.92
8254 8943 0.889306 CCCCTCGCTACTACTATGGC 59.111 60.000 0.00 0.00 0.00 4.40
8255 8944 2.289592 ACCCCTCGCTACTACTATGG 57.710 55.000 0.00 0.00 0.00 2.74
8256 8945 6.709846 GGTATATACCCCTCGCTACTACTATG 59.290 46.154 19.76 0.00 40.53 2.23
8257 8946 6.836242 GGTATATACCCCTCGCTACTACTAT 58.164 44.000 19.76 0.00 40.53 2.12
8258 8947 6.240549 GGTATATACCCCTCGCTACTACTA 57.759 45.833 19.76 0.00 40.53 1.82
8259 8948 5.109500 GGTATATACCCCTCGCTACTACT 57.891 47.826 19.76 0.00 40.53 2.57
8272 8961 6.881602 ACTTAGTAGTAGCGTGGGTATATACC 59.118 42.308 21.88 21.88 38.04 2.73
8273 8962 7.913674 ACTTAGTAGTAGCGTGGGTATATAC 57.086 40.000 4.14 4.14 31.21 1.47
8274 8963 8.156820 TCAACTTAGTAGTAGCGTGGGTATATA 58.843 37.037 0.00 0.00 33.17 0.86
8275 8964 7.000472 TCAACTTAGTAGTAGCGTGGGTATAT 59.000 38.462 0.00 0.00 33.17 0.86
8276 8965 6.356556 TCAACTTAGTAGTAGCGTGGGTATA 58.643 40.000 0.00 0.00 33.17 1.47
8277 8966 5.195940 TCAACTTAGTAGTAGCGTGGGTAT 58.804 41.667 0.00 0.00 33.17 2.73
8278 8967 4.588899 TCAACTTAGTAGTAGCGTGGGTA 58.411 43.478 0.00 0.00 33.17 3.69
8279 8968 3.424703 TCAACTTAGTAGTAGCGTGGGT 58.575 45.455 0.00 0.00 33.17 4.51
8280 8969 4.650754 ATCAACTTAGTAGTAGCGTGGG 57.349 45.455 0.00 0.00 33.17 4.61
8281 8970 6.374565 ACTATCAACTTAGTAGTAGCGTGG 57.625 41.667 0.00 0.00 33.17 4.94
8290 8979 5.178252 CCGCGCTACTACTATCAACTTAGTA 59.822 44.000 5.56 0.00 34.35 1.82
8291 8980 4.024218 CCGCGCTACTACTATCAACTTAGT 60.024 45.833 5.56 0.00 36.43 2.24
8292 8981 4.465016 CCGCGCTACTACTATCAACTTAG 58.535 47.826 5.56 0.00 0.00 2.18
8293 8982 3.251729 CCCGCGCTACTACTATCAACTTA 59.748 47.826 5.56 0.00 0.00 2.24
8294 8983 2.034305 CCCGCGCTACTACTATCAACTT 59.966 50.000 5.56 0.00 0.00 2.66
8295 8984 1.607628 CCCGCGCTACTACTATCAACT 59.392 52.381 5.56 0.00 0.00 3.16
8296 8985 1.336125 ACCCGCGCTACTACTATCAAC 59.664 52.381 5.56 0.00 0.00 3.18
8297 8986 1.683943 ACCCGCGCTACTACTATCAA 58.316 50.000 5.56 0.00 0.00 2.57
8298 8987 1.683943 AACCCGCGCTACTACTATCA 58.316 50.000 5.56 0.00 0.00 2.15
8299 8988 2.789491 AAACCCGCGCTACTACTATC 57.211 50.000 5.56 0.00 0.00 2.08
8300 8989 5.006386 AGTATAAACCCGCGCTACTACTAT 58.994 41.667 5.56 0.00 0.00 2.12
8301 8990 4.389374 AGTATAAACCCGCGCTACTACTA 58.611 43.478 5.56 0.00 0.00 1.82
8302 8991 3.217626 AGTATAAACCCGCGCTACTACT 58.782 45.455 5.56 0.00 0.00 2.57
8303 8992 3.559504 GAGTATAAACCCGCGCTACTAC 58.440 50.000 5.56 0.00 0.00 2.73
8304 8993 2.554032 GGAGTATAAACCCGCGCTACTA 59.446 50.000 5.56 0.00 0.00 1.82
8305 8994 1.339291 GGAGTATAAACCCGCGCTACT 59.661 52.381 5.56 4.16 0.00 2.57
8306 8995 1.339291 AGGAGTATAAACCCGCGCTAC 59.661 52.381 5.56 0.00 0.00 3.58
8307 8996 1.696063 AGGAGTATAAACCCGCGCTA 58.304 50.000 5.56 0.00 0.00 4.26
8308 8997 1.696063 TAGGAGTATAAACCCGCGCT 58.304 50.000 5.56 0.00 0.00 5.92
8309 8998 2.230750 AGATAGGAGTATAAACCCGCGC 59.769 50.000 0.00 0.00 0.00 6.86
8310 8999 4.699257 AGTAGATAGGAGTATAAACCCGCG 59.301 45.833 0.00 0.00 0.00 6.46
8311 9000 6.883756 AGTAGTAGATAGGAGTATAAACCCGC 59.116 42.308 0.00 0.00 0.00 6.13
8312 9001 9.950496 TTAGTAGTAGATAGGAGTATAAACCCG 57.050 37.037 0.00 0.00 0.00 5.28
8321 9010 8.947305 ACCATGTACTTAGTAGTAGATAGGAGT 58.053 37.037 12.97 0.00 38.43 3.85
8322 9011 9.796180 AACCATGTACTTAGTAGTAGATAGGAG 57.204 37.037 12.97 0.00 38.43 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.