Multiple sequence alignment - TraesCS4B01G330400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G330400 chr4B 100.000 8149 0 0 905 9053 621429665 621437813 0.000000e+00 15049.0
1 TraesCS4B01G330400 chr4B 100.000 600 0 0 1 600 621428761 621429360 0.000000e+00 1109.0
2 TraesCS4B01G330400 chr4B 80.423 189 35 2 4624 4811 250736945 250736758 9.480000e-30 143.0
3 TraesCS4B01G330400 chr4D 92.342 3108 155 25 5959 9050 486769355 486772395 0.000000e+00 4344.0
4 TraesCS4B01G330400 chr4D 95.652 1288 53 2 2052 3338 242938974 242937689 0.000000e+00 2065.0
5 TraesCS4B01G330400 chr4D 88.674 1342 101 30 3738 5042 486766610 486767937 0.000000e+00 1589.0
6 TraesCS4B01G330400 chr4D 90.291 1133 64 26 950 2042 486765131 486766257 0.000000e+00 1441.0
7 TraesCS4B01G330400 chr4D 87.845 724 66 12 5233 5943 486768465 486769179 0.000000e+00 830.0
8 TraesCS4B01G330400 chr4D 94.783 345 17 1 3346 3689 486766266 486766610 3.720000e-148 536.0
9 TraesCS4B01G330400 chr4D 85.521 518 36 16 85 563 486764093 486764610 1.050000e-138 505.0
10 TraesCS4B01G330400 chr4D 96.491 57 2 0 3688 3744 277378548 277378604 2.690000e-15 95.3
11 TraesCS4B01G330400 chr4D 94.828 58 3 0 3684 3741 322663869 322663812 3.480000e-14 91.6
12 TraesCS4B01G330400 chr4D 100.000 45 0 0 905 949 486764748 486764792 5.820000e-12 84.2
13 TraesCS4B01G330400 chr2D 95.609 1298 53 3 2041 3338 136426825 136425532 0.000000e+00 2078.0
14 TraesCS4B01G330400 chr2D 95.440 1294 56 2 2045 3338 364091321 364092611 0.000000e+00 2060.0
15 TraesCS4B01G330400 chr2D 91.462 773 53 8 6960 7723 380417297 380416529 0.000000e+00 1050.0
16 TraesCS4B01G330400 chr7B 95.938 1280 50 1 2059 3338 244420229 244421506 0.000000e+00 2074.0
17 TraesCS4B01G330400 chr3D 95.879 1286 42 6 2054 3338 329442577 329443852 0.000000e+00 2071.0
18 TraesCS4B01G330400 chr5B 95.518 1294 55 2 2045 3338 136051569 136052859 0.000000e+00 2065.0
19 TraesCS4B01G330400 chr5B 92.063 63 3 2 3685 3745 250605872 250605934 4.500000e-13 87.9
20 TraesCS4B01G330400 chr1D 95.578 1289 54 2 2050 3338 223524583 223523298 0.000000e+00 2061.0
21 TraesCS4B01G330400 chr1D 95.440 1294 55 3 2045 3338 247478809 247480098 0.000000e+00 2060.0
22 TraesCS4B01G330400 chr1D 96.296 54 2 0 3688 3741 345380280 345380333 1.250000e-13 89.8
23 TraesCS4B01G330400 chr3A 95.433 1292 51 5 2048 3338 80426281 80424997 0.000000e+00 2052.0
24 TraesCS4B01G330400 chr3A 86.207 232 18 9 1768 1993 546135552 546135329 1.170000e-58 239.0
25 TraesCS4B01G330400 chr3A 86.207 232 18 6 1768 1993 664710713 664710490 1.170000e-58 239.0
26 TraesCS4B01G330400 chr3A 85.776 232 19 6 1768 1993 51520261 51520484 5.470000e-57 233.0
27 TraesCS4B01G330400 chr3A 85.776 232 19 6 1768 1993 76444496 76444719 5.470000e-57 233.0
28 TraesCS4B01G330400 chr3A 85.345 232 20 6 1768 1993 202410167 202410390 2.540000e-55 228.0
29 TraesCS4B01G330400 chr3A 85.281 231 20 6 1769 1993 49802373 49802595 9.150000e-55 226.0
30 TraesCS4B01G330400 chr5A 88.719 1179 84 26 905 2047 667096613 667097778 0.000000e+00 1395.0
31 TraesCS4B01G330400 chr5A 91.568 925 53 15 3739 4641 667098105 667099026 0.000000e+00 1253.0
32 TraesCS4B01G330400 chr5A 87.882 1081 83 30 7782 8840 667102363 667103417 0.000000e+00 1227.0
33 TraesCS4B01G330400 chr5A 89.740 770 71 5 6960 7723 68818524 68817757 0.000000e+00 977.0
34 TraesCS4B01G330400 chr5A 87.841 806 66 15 5217 6009 667099666 667100452 0.000000e+00 917.0
35 TraesCS4B01G330400 chr5A 85.036 842 86 22 5930 6765 667100459 667101266 0.000000e+00 821.0
36 TraesCS4B01G330400 chr5A 94.783 345 16 2 3346 3690 667097766 667098108 3.720000e-148 536.0
37 TraesCS4B01G330400 chr5A 86.957 253 22 5 177 429 667096088 667096329 3.220000e-69 274.0
38 TraesCS4B01G330400 chr2A 91.310 771 54 8 6960 7721 515952411 515951645 0.000000e+00 1040.0
39 TraesCS4B01G330400 chr2A 89.923 784 68 8 6955 7729 179282253 179283034 0.000000e+00 1000.0
40 TraesCS4B01G330400 chr2A 89.870 770 70 6 6960 7723 578391254 578390487 0.000000e+00 983.0
41 TraesCS4B01G330400 chr7A 90.116 779 66 8 6960 7729 193632474 193631698 0.000000e+00 1002.0
42 TraesCS4B01G330400 chr7A 86.207 232 18 6 1768 1993 729616701 729616478 1.170000e-58 239.0
43 TraesCS4B01G330400 chr7A 86.207 232 18 6 1768 1993 729641790 729641567 1.170000e-58 239.0
44 TraesCS4B01G330400 chr7A 96.296 54 2 0 3688 3741 544893828 544893881 1.250000e-13 89.8
45 TraesCS4B01G330400 chr7A 86.486 74 7 2 3685 3757 538579064 538578993 2.710000e-10 78.7
46 TraesCS4B01G330400 chr6A 89.740 770 71 5 6960 7723 58016031 58015264 0.000000e+00 977.0
47 TraesCS4B01G330400 chr4A 89.575 777 70 8 6955 7723 357685323 357686096 0.000000e+00 976.0
48 TraesCS4B01G330400 chr4A 86.207 232 18 6 1768 1993 228781140 228781363 1.170000e-58 239.0
49 TraesCS4B01G330400 chr3B 96.296 54 2 0 3688 3741 760711288 760711235 1.250000e-13 89.8
50 TraesCS4B01G330400 chr1A 96.296 54 2 0 3688 3741 391760713 391760660 1.250000e-13 89.8
51 TraesCS4B01G330400 chr1A 96.296 54 2 0 3688 3741 391841770 391841717 1.250000e-13 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G330400 chr4B 621428761 621437813 9052 False 8079.000000 15049 100.000000 1 9053 2 chr4B.!!$F1 9052
1 TraesCS4B01G330400 chr4D 242937689 242938974 1285 True 2065.000000 2065 95.652000 2052 3338 1 chr4D.!!$R1 1286
2 TraesCS4B01G330400 chr4D 486764093 486772395 8302 False 1332.742857 4344 91.350857 85 9050 7 chr4D.!!$F2 8965
3 TraesCS4B01G330400 chr2D 136425532 136426825 1293 True 2078.000000 2078 95.609000 2041 3338 1 chr2D.!!$R1 1297
4 TraesCS4B01G330400 chr2D 364091321 364092611 1290 False 2060.000000 2060 95.440000 2045 3338 1 chr2D.!!$F1 1293
5 TraesCS4B01G330400 chr2D 380416529 380417297 768 True 1050.000000 1050 91.462000 6960 7723 1 chr2D.!!$R2 763
6 TraesCS4B01G330400 chr7B 244420229 244421506 1277 False 2074.000000 2074 95.938000 2059 3338 1 chr7B.!!$F1 1279
7 TraesCS4B01G330400 chr3D 329442577 329443852 1275 False 2071.000000 2071 95.879000 2054 3338 1 chr3D.!!$F1 1284
8 TraesCS4B01G330400 chr5B 136051569 136052859 1290 False 2065.000000 2065 95.518000 2045 3338 1 chr5B.!!$F1 1293
9 TraesCS4B01G330400 chr1D 223523298 223524583 1285 True 2061.000000 2061 95.578000 2050 3338 1 chr1D.!!$R1 1288
10 TraesCS4B01G330400 chr1D 247478809 247480098 1289 False 2060.000000 2060 95.440000 2045 3338 1 chr1D.!!$F1 1293
11 TraesCS4B01G330400 chr3A 80424997 80426281 1284 True 2052.000000 2052 95.433000 2048 3338 1 chr3A.!!$R1 1290
12 TraesCS4B01G330400 chr5A 68817757 68818524 767 True 977.000000 977 89.740000 6960 7723 1 chr5A.!!$R1 763
13 TraesCS4B01G330400 chr5A 667096088 667103417 7329 False 917.571429 1395 88.969429 177 8840 7 chr5A.!!$F1 8663
14 TraesCS4B01G330400 chr2A 515951645 515952411 766 True 1040.000000 1040 91.310000 6960 7721 1 chr2A.!!$R1 761
15 TraesCS4B01G330400 chr2A 179282253 179283034 781 False 1000.000000 1000 89.923000 6955 7729 1 chr2A.!!$F1 774
16 TraesCS4B01G330400 chr2A 578390487 578391254 767 True 983.000000 983 89.870000 6960 7723 1 chr2A.!!$R2 763
17 TraesCS4B01G330400 chr7A 193631698 193632474 776 True 1002.000000 1002 90.116000 6960 7729 1 chr7A.!!$R1 769
18 TraesCS4B01G330400 chr6A 58015264 58016031 767 True 977.000000 977 89.740000 6960 7723 1 chr6A.!!$R1 763
19 TraesCS4B01G330400 chr4A 357685323 357686096 773 False 976.000000 976 89.575000 6955 7723 1 chr4A.!!$F2 768

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
101 102 0.248458 ACTTGTGGCGTTTTTGCTCG 60.248 50.0 0.00 0.00 34.52 5.03 F
557 622 0.388520 CGCTCGCGAATATCCATCCA 60.389 55.0 11.33 0.00 42.83 3.41 F
1633 2080 0.802222 TTGCTCGTATGCAGCGTCTC 60.802 55.0 12.19 4.99 44.27 3.36 F
2351 2823 0.249031 GCGCTGAATATGCCCAAACC 60.249 55.0 0.00 0.00 0.00 3.27 F
3703 4185 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.0 0.00 0.00 0.00 4.12 F
3704 4186 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.0 0.00 0.00 0.00 3.28 F
4675 5188 0.394899 GCTCCCCTCATGGAAACTGG 60.395 60.0 0.00 0.00 35.39 4.00 F
5207 5812 0.532862 AGTCGTCTTTGCCACTGTGG 60.533 55.0 22.46 22.46 41.55 4.17 F
5339 6216 0.679505 TGGGTATGGCTGACGCTATC 59.320 55.0 7.65 0.00 38.40 2.08 F
6060 7112 0.885196 GCCTGTGCCCACGAAATAAA 59.115 50.0 0.00 0.00 0.00 1.40 F
7244 8337 0.878961 GTTCTATCGGGCGGCGATTT 60.879 55.0 12.98 2.83 0.00 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1612 2059 0.042708 GACGCTGCATACGAGCAATG 60.043 55.000 15.32 0.00 45.13 2.82 R
1650 2097 1.897423 CAGGACATGCCGAGGTACA 59.103 57.895 0.00 0.00 43.43 2.90 R
3264 3746 0.776810 TTGGTTTCATGCCTGGGAGA 59.223 50.000 0.00 0.00 0.00 3.71 R
3881 4372 1.078143 GCAGGGAATCGCTGGAAGT 60.078 57.895 25.27 0.00 43.28 3.01 R
4648 5161 0.105039 CATGAGGGGAGCGGACTAAC 59.895 60.000 0.00 0.00 0.00 2.34 R
4920 5433 0.253610 TGGACAACCCACAACGTTCT 59.746 50.000 0.00 0.00 40.82 3.01 R
6034 7086 1.070134 TCGTGGGCACAGGCTATAATC 59.930 52.381 3.11 0.00 40.87 1.75 R
7147 8240 0.181350 ACTTCATCCATCCGGCCTTC 59.819 55.000 0.00 0.00 0.00 3.46 R
7244 8337 1.419762 ACCATACAACACTGCAGGTCA 59.580 47.619 19.93 3.17 0.00 4.02 R
7971 9916 1.521423 GTCAGTTTCGACACCAAGACG 59.479 52.381 0.00 0.00 35.88 4.18 R
9016 10982 0.033504 GCAACCGAACTCCAGAGACA 59.966 55.000 0.70 0.00 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 8.899427 TTTTTAGCATGATTTGAACCATTTCA 57.101 26.923 0.00 0.00 40.14 2.69
43 44 8.537049 TTTTAGCATGATTTGAACCATTTCAG 57.463 30.769 0.00 0.00 42.79 3.02
44 45 5.988310 AGCATGATTTGAACCATTTCAGA 57.012 34.783 0.00 0.00 42.79 3.27
45 46 6.540438 AGCATGATTTGAACCATTTCAGAT 57.460 33.333 0.00 0.00 42.79 2.90
46 47 6.942976 AGCATGATTTGAACCATTTCAGATT 58.057 32.000 0.00 0.00 42.79 2.40
47 48 7.391620 AGCATGATTTGAACCATTTCAGATTT 58.608 30.769 0.00 0.00 42.79 2.17
48 49 7.881232 AGCATGATTTGAACCATTTCAGATTTT 59.119 29.630 0.00 0.00 42.79 1.82
49 50 7.960738 GCATGATTTGAACCATTTCAGATTTTG 59.039 33.333 0.00 0.00 42.79 2.44
50 51 8.995220 CATGATTTGAACCATTTCAGATTTTGT 58.005 29.630 0.00 0.00 42.79 2.83
52 53 9.695526 TGATTTGAACCATTTCAGATTTTGTAG 57.304 29.630 0.00 0.00 42.79 2.74
53 54 7.945033 TTTGAACCATTTCAGATTTTGTAGC 57.055 32.000 0.00 0.00 42.79 3.58
54 55 6.647334 TGAACCATTTCAGATTTTGTAGCA 57.353 33.333 0.00 0.00 36.79 3.49
55 56 6.446318 TGAACCATTTCAGATTTTGTAGCAC 58.554 36.000 0.00 0.00 36.79 4.40
56 57 5.046910 ACCATTTCAGATTTTGTAGCACG 57.953 39.130 0.00 0.00 0.00 5.34
57 58 4.759693 ACCATTTCAGATTTTGTAGCACGA 59.240 37.500 0.00 0.00 0.00 4.35
58 59 5.415701 ACCATTTCAGATTTTGTAGCACGAT 59.584 36.000 0.00 0.00 0.00 3.73
59 60 6.597672 ACCATTTCAGATTTTGTAGCACGATA 59.402 34.615 0.00 0.00 0.00 2.92
60 61 7.283127 ACCATTTCAGATTTTGTAGCACGATAT 59.717 33.333 0.00 0.00 0.00 1.63
61 62 7.588854 CCATTTCAGATTTTGTAGCACGATATG 59.411 37.037 0.00 0.00 0.00 1.78
62 63 7.841915 TTTCAGATTTTGTAGCACGATATGA 57.158 32.000 0.00 0.00 0.00 2.15
63 64 8.437360 TTTCAGATTTTGTAGCACGATATGAT 57.563 30.769 0.00 0.00 0.00 2.45
64 65 7.643528 TCAGATTTTGTAGCACGATATGATC 57.356 36.000 0.00 0.00 0.00 2.92
65 66 6.646653 TCAGATTTTGTAGCACGATATGATCC 59.353 38.462 0.00 0.00 0.00 3.36
66 67 6.648310 CAGATTTTGTAGCACGATATGATCCT 59.352 38.462 0.00 0.00 0.00 3.24
67 68 6.870965 AGATTTTGTAGCACGATATGATCCTC 59.129 38.462 0.00 0.00 0.00 3.71
68 69 5.791336 TTTGTAGCACGATATGATCCTCT 57.209 39.130 0.00 0.00 0.00 3.69
69 70 5.791336 TTGTAGCACGATATGATCCTCTT 57.209 39.130 0.00 0.00 0.00 2.85
70 71 5.126396 TGTAGCACGATATGATCCTCTTG 57.874 43.478 0.00 0.00 0.00 3.02
71 72 4.584743 TGTAGCACGATATGATCCTCTTGT 59.415 41.667 0.00 0.00 0.00 3.16
72 73 4.679373 AGCACGATATGATCCTCTTGTT 57.321 40.909 0.00 0.00 0.00 2.83
73 74 5.791336 AGCACGATATGATCCTCTTGTTA 57.209 39.130 0.00 0.00 0.00 2.41
74 75 6.161855 AGCACGATATGATCCTCTTGTTAA 57.838 37.500 0.00 0.00 0.00 2.01
75 76 5.986135 AGCACGATATGATCCTCTTGTTAAC 59.014 40.000 0.00 0.00 0.00 2.01
76 77 5.107837 GCACGATATGATCCTCTTGTTAACG 60.108 44.000 0.26 0.00 0.00 3.18
77 78 4.982916 ACGATATGATCCTCTTGTTAACGC 59.017 41.667 0.26 0.00 0.00 4.84
78 79 4.386049 CGATATGATCCTCTTGTTAACGCC 59.614 45.833 0.26 0.00 0.00 5.68
79 80 3.627395 ATGATCCTCTTGTTAACGCCA 57.373 42.857 0.26 0.00 0.00 5.69
80 81 3.627395 TGATCCTCTTGTTAACGCCAT 57.373 42.857 0.26 0.00 0.00 4.40
81 82 3.270027 TGATCCTCTTGTTAACGCCATG 58.730 45.455 0.26 0.00 0.00 3.66
82 83 3.055458 TGATCCTCTTGTTAACGCCATGA 60.055 43.478 0.26 0.00 0.00 3.07
83 84 2.695359 TCCTCTTGTTAACGCCATGAC 58.305 47.619 0.26 0.00 0.00 3.06
101 102 0.248458 ACTTGTGGCGTTTTTGCTCG 60.248 50.000 0.00 0.00 34.52 5.03
105 106 2.254350 GGCGTTTTTGCTCGACCC 59.746 61.111 0.00 0.00 34.52 4.46
113 114 3.858868 TTGCTCGACCCAGACACGC 62.859 63.158 0.00 0.00 0.00 5.34
120 121 2.983592 CCCAGACACGCCAAACCC 60.984 66.667 0.00 0.00 0.00 4.11
125 126 0.681564 AGACACGCCAAACCCAACAA 60.682 50.000 0.00 0.00 0.00 2.83
128 129 1.142965 ACGCCAAACCCAACAAAGC 59.857 52.632 0.00 0.00 0.00 3.51
181 208 2.335011 GTTGCTGGAAACGCCACC 59.665 61.111 0.00 0.00 43.33 4.61
223 250 2.286772 CGCCATATGGTTTAGCGTTTCC 60.287 50.000 22.79 0.85 41.78 3.13
246 273 1.064463 CCTGCCATGTAGGTGGTCAAT 60.064 52.381 5.33 0.00 41.47 2.57
264 291 3.447229 TCAATTGCTACTCGACCAGATCA 59.553 43.478 0.00 0.00 0.00 2.92
309 336 2.831526 GGTTTGGCATTTCTATGTGGGT 59.168 45.455 0.00 0.00 34.12 4.51
313 340 4.853468 TGGCATTTCTATGTGGGTTAGA 57.147 40.909 0.00 0.00 34.12 2.10
319 346 1.828595 TCTATGTGGGTTAGAAGCGCA 59.171 47.619 11.47 0.00 0.00 6.09
353 380 3.149196 GTTGCTGAAAAGGGTCAGATCA 58.851 45.455 6.39 0.00 46.76 2.92
366 393 6.928520 AGGGTCAGATCATGTTCAAAATTTC 58.071 36.000 6.55 0.00 0.00 2.17
371 398 8.017373 GTCAGATCATGTTCAAAATTTCGAAGA 58.983 33.333 6.55 0.00 0.00 2.87
557 622 0.388520 CGCTCGCGAATATCCATCCA 60.389 55.000 11.33 0.00 42.83 3.41
558 623 1.737029 CGCTCGCGAATATCCATCCAT 60.737 52.381 11.33 0.00 42.83 3.41
560 625 2.675032 GCTCGCGAATATCCATCCATCA 60.675 50.000 11.33 0.00 0.00 3.07
562 627 3.785486 TCGCGAATATCCATCCATCATC 58.215 45.455 6.20 0.00 0.00 2.92
563 628 2.868583 CGCGAATATCCATCCATCATCC 59.131 50.000 0.00 0.00 0.00 3.51
564 629 3.431346 CGCGAATATCCATCCATCATCCT 60.431 47.826 0.00 0.00 0.00 3.24
565 630 4.521146 GCGAATATCCATCCATCATCCTT 58.479 43.478 0.00 0.00 0.00 3.36
567 632 5.065731 GCGAATATCCATCCATCATCCTTTC 59.934 44.000 0.00 0.00 0.00 2.62
568 633 6.413052 CGAATATCCATCCATCATCCTTTCT 58.587 40.000 0.00 0.00 0.00 2.52
569 634 6.538021 CGAATATCCATCCATCATCCTTTCTC 59.462 42.308 0.00 0.00 0.00 2.87
570 635 6.964876 ATATCCATCCATCATCCTTTCTCA 57.035 37.500 0.00 0.00 0.00 3.27
571 636 5.658198 ATCCATCCATCATCCTTTCTCAA 57.342 39.130 0.00 0.00 0.00 3.02
573 638 5.829986 TCCATCCATCATCCTTTCTCAAAA 58.170 37.500 0.00 0.00 0.00 2.44
574 639 6.255287 TCCATCCATCATCCTTTCTCAAAAA 58.745 36.000 0.00 0.00 0.00 1.94
1326 1758 5.726980 TCCATTTCTGGGACTGAATTTTG 57.273 39.130 0.00 0.00 45.27 2.44
1327 1759 5.147032 TCCATTTCTGGGACTGAATTTTGT 58.853 37.500 0.00 0.00 45.27 2.83
1328 1760 5.010922 TCCATTTCTGGGACTGAATTTTGTG 59.989 40.000 0.00 0.00 45.27 3.33
1329 1761 5.010922 CCATTTCTGGGACTGAATTTTGTGA 59.989 40.000 0.00 0.00 45.27 3.58
1428 1870 1.618876 AATACACCGCCGACATCCCA 61.619 55.000 0.00 0.00 0.00 4.37
1445 1887 1.905215 CCCACAGGTGAGTTCTCATCT 59.095 52.381 9.49 9.49 0.00 2.90
1464 1911 2.418910 CCGTCTCCTCGGCATCACT 61.419 63.158 0.00 0.00 43.96 3.41
1466 1913 1.893786 GTCTCCTCGGCATCACTGT 59.106 57.895 0.00 0.00 0.00 3.55
1468 1915 0.900182 TCTCCTCGGCATCACTGTGT 60.900 55.000 7.79 0.00 0.00 3.72
1483 1930 3.318275 CACTGTGTACCGTATCTAGGCAT 59.682 47.826 0.00 0.00 0.00 4.40
1492 1939 3.319405 CCGTATCTAGGCATGAGAAGTGT 59.681 47.826 0.00 0.00 0.00 3.55
1493 1940 4.202161 CCGTATCTAGGCATGAGAAGTGTT 60.202 45.833 0.00 0.00 0.00 3.32
1495 1942 5.812642 CGTATCTAGGCATGAGAAGTGTTTT 59.187 40.000 0.00 0.00 0.00 2.43
1496 1943 6.237942 CGTATCTAGGCATGAGAAGTGTTTTG 60.238 42.308 0.00 0.00 0.00 2.44
1571 2018 3.130516 TGATAGGACGGCACAGTTTAGAG 59.869 47.826 0.00 0.00 0.00 2.43
1583 2030 3.118519 ACAGTTTAGAGACACCGTGGTTT 60.119 43.478 3.03 0.00 0.00 3.27
1592 2039 2.937799 GACACCGTGGTTTGACAGTTTA 59.062 45.455 3.03 0.00 0.00 2.01
1633 2080 0.802222 TTGCTCGTATGCAGCGTCTC 60.802 55.000 12.19 4.99 44.27 3.36
1650 2097 4.083802 GCGTCTCTTTCATGCTTAAACACT 60.084 41.667 0.00 0.00 0.00 3.55
1659 2106 3.034721 TGCTTAAACACTGTACCTCGG 57.965 47.619 0.00 0.00 0.00 4.63
1694 2141 8.928733 GCATTTGTTTCATCTACAATTGACATT 58.071 29.630 13.59 0.00 38.31 2.71
1704 2151 2.431782 ACAATTGACATTAGCATGGGGC 59.568 45.455 13.59 0.00 45.30 5.80
1845 2293 7.933577 GTGATACATCAGGAGATTTGTTCCATA 59.066 37.037 0.00 0.00 37.51 2.74
1849 2297 6.996879 ACATCAGGAGATTTGTTCCATATCTG 59.003 38.462 2.55 0.00 33.59 2.90
1883 2335 4.394300 CCAACAGTTCTGTCAAGATGATCC 59.606 45.833 5.91 0.00 30.72 3.36
1887 2339 4.507021 CAGTTCTGTCAAGATGATCCATCG 59.493 45.833 0.00 0.00 44.67 3.84
1934 2388 3.973206 ATATGTGTCCCGTCTTTGACA 57.027 42.857 0.00 0.00 39.08 3.58
1935 2389 2.859165 ATGTGTCCCGTCTTTGACAT 57.141 45.000 0.00 0.00 42.90 3.06
1936 2390 3.973206 ATGTGTCCCGTCTTTGACATA 57.027 42.857 0.00 0.00 42.90 2.29
1984 2438 5.306937 TCAGAGATTTAGACCAACTGGAACA 59.693 40.000 1.86 0.00 38.94 3.18
2034 2505 0.887247 TGTGCTGTGTTGCTTTGTGT 59.113 45.000 0.00 0.00 0.00 3.72
2037 2508 1.271934 TGCTGTGTTGCTTTGTGTTGT 59.728 42.857 0.00 0.00 0.00 3.32
2077 2548 3.394719 ACAACAACCAACAACAACAACC 58.605 40.909 0.00 0.00 0.00 3.77
2182 2654 2.111999 TAGCAAGCTTCCACGCACCT 62.112 55.000 8.96 0.00 0.00 4.00
2290 2762 1.472376 CCTCTCTTGACATTCTCCGCC 60.472 57.143 0.00 0.00 0.00 6.13
2351 2823 0.249031 GCGCTGAATATGCCCAAACC 60.249 55.000 0.00 0.00 0.00 3.27
2352 2824 0.385390 CGCTGAATATGCCCAAACCC 59.615 55.000 0.00 0.00 0.00 4.11
2389 2861 5.360714 TGTTGGACAAGCTTCTCTTCAATTT 59.639 36.000 0.00 0.00 31.27 1.82
2436 2908 7.012421 CGTATATCATCATTCCGGACTCTATCA 59.988 40.741 1.83 0.00 0.00 2.15
2554 3026 0.309302 CAACATTGCGGGTCGAACAA 59.691 50.000 1.31 0.00 0.00 2.83
2562 3034 1.865788 CGGGTCGAACAACCGTCCTA 61.866 60.000 1.31 0.00 42.53 2.94
2588 3060 4.736126 ACTTGCCTTTTAGCTTTTGTGT 57.264 36.364 0.00 0.00 0.00 3.72
2646 3118 2.094675 CACTTCATCCATCCGGCTTTT 58.905 47.619 0.00 0.00 0.00 2.27
2686 3158 1.355720 CATCAATACCCCCATCCTCCC 59.644 57.143 0.00 0.00 0.00 4.30
2770 3248 1.007238 CCTCCTCCTCCTCACACCTAA 59.993 57.143 0.00 0.00 0.00 2.69
2799 3277 2.760634 AACCGCACATCATGTACTCA 57.239 45.000 0.00 0.00 0.00 3.41
2800 3278 2.760634 ACCGCACATCATGTACTCAA 57.239 45.000 0.00 0.00 0.00 3.02
2933 3411 6.475504 CAAAGAGCATACACCATGGGATATA 58.524 40.000 18.09 2.80 34.97 0.86
3105 3584 5.817816 GTCCTTGATGAGGGTAATGTACTTG 59.182 44.000 0.00 0.00 46.31 3.16
3132 3611 2.952310 GACTTTGTGTTTCTCCAAGGCT 59.048 45.455 0.00 0.00 0.00 4.58
3147 3626 2.559668 CAAGGCTCACCACATGACATTT 59.440 45.455 0.00 0.00 39.06 2.32
3264 3746 2.442236 AAATGGCTTCCATGGTCGAT 57.558 45.000 12.58 2.61 44.40 3.59
3338 3820 1.674221 GCGGTGCTCAATGACTCTCTT 60.674 52.381 0.00 0.00 0.00 2.85
3339 3821 2.266554 CGGTGCTCAATGACTCTCTTC 58.733 52.381 0.00 0.00 0.00 2.87
3340 3822 2.094286 CGGTGCTCAATGACTCTCTTCT 60.094 50.000 0.00 0.00 0.00 2.85
3341 3823 3.616076 CGGTGCTCAATGACTCTCTTCTT 60.616 47.826 0.00 0.00 0.00 2.52
3342 3824 4.380973 CGGTGCTCAATGACTCTCTTCTTA 60.381 45.833 0.00 0.00 0.00 2.10
3343 3825 5.482908 GGTGCTCAATGACTCTCTTCTTAA 58.517 41.667 0.00 0.00 0.00 1.85
3344 3826 5.934625 GGTGCTCAATGACTCTCTTCTTAAA 59.065 40.000 0.00 0.00 0.00 1.52
3345 3827 6.128418 GGTGCTCAATGACTCTCTTCTTAAAC 60.128 42.308 0.00 0.00 0.00 2.01
3346 3828 6.648725 GTGCTCAATGACTCTCTTCTTAAACT 59.351 38.462 0.00 0.00 0.00 2.66
3347 3829 6.648310 TGCTCAATGACTCTCTTCTTAAACTG 59.352 38.462 0.00 0.00 0.00 3.16
3348 3830 6.648725 GCTCAATGACTCTCTTCTTAAACTGT 59.351 38.462 0.00 0.00 0.00 3.55
3349 3831 7.815068 GCTCAATGACTCTCTTCTTAAACTGTA 59.185 37.037 0.00 0.00 0.00 2.74
3350 3832 9.352784 CTCAATGACTCTCTTCTTAAACTGTAG 57.647 37.037 0.00 0.00 0.00 2.74
3351 3833 8.861086 TCAATGACTCTCTTCTTAAACTGTAGT 58.139 33.333 0.00 0.00 0.00 2.73
3352 3834 9.482627 CAATGACTCTCTTCTTAAACTGTAGTT 57.517 33.333 0.00 0.00 40.50 2.24
3354 3836 9.699703 ATGACTCTCTTCTTAAACTGTAGTTTC 57.300 33.333 12.84 0.00 44.15 2.78
3355 3837 8.692710 TGACTCTCTTCTTAAACTGTAGTTTCA 58.307 33.333 12.84 2.64 44.15 2.69
3356 3838 8.874744 ACTCTCTTCTTAAACTGTAGTTTCAC 57.125 34.615 12.84 0.00 44.15 3.18
3357 3839 8.697292 ACTCTCTTCTTAAACTGTAGTTTCACT 58.303 33.333 12.84 0.00 44.15 3.41
3358 3840 8.873215 TCTCTTCTTAAACTGTAGTTTCACTG 57.127 34.615 12.84 3.78 44.15 3.66
3359 3841 8.475639 TCTCTTCTTAAACTGTAGTTTCACTGT 58.524 33.333 12.84 0.00 44.15 3.55
3360 3842 9.745880 CTCTTCTTAAACTGTAGTTTCACTGTA 57.254 33.333 12.84 0.00 44.15 2.74
3440 3922 0.956633 TCAGCAAAGCTCTGCAAAGG 59.043 50.000 15.73 0.66 45.18 3.11
3692 4174 0.740737 GCACCATTGCCATGTACTCC 59.259 55.000 0.00 0.00 43.66 3.85
3693 4175 1.392589 CACCATTGCCATGTACTCCC 58.607 55.000 0.00 0.00 0.00 4.30
3695 4177 1.212935 ACCATTGCCATGTACTCCCTC 59.787 52.381 0.00 0.00 0.00 4.30
3696 4178 1.477558 CCATTGCCATGTACTCCCTCC 60.478 57.143 0.00 0.00 0.00 4.30
3697 4179 0.469917 ATTGCCATGTACTCCCTCCG 59.530 55.000 0.00 0.00 0.00 4.63
3698 4180 0.907704 TTGCCATGTACTCCCTCCGT 60.908 55.000 0.00 0.00 0.00 4.69
3699 4181 1.327690 TGCCATGTACTCCCTCCGTC 61.328 60.000 0.00 0.00 0.00 4.79
3700 4182 2.029307 GCCATGTACTCCCTCCGTCC 62.029 65.000 0.00 0.00 0.00 4.79
3701 4183 1.400530 CCATGTACTCCCTCCGTCCC 61.401 65.000 0.00 0.00 0.00 4.46
3702 4184 0.686441 CATGTACTCCCTCCGTCCCA 60.686 60.000 0.00 0.00 0.00 4.37
3703 4185 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
3704 4186 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
3705 4187 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
3706 4188 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
3707 4189 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3708 4190 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3709 4191 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3710 4192 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3711 4193 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3712 4194 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
3713 4195 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
3714 4196 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
3715 4197 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
3716 4198 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
3717 4199 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
3718 4200 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
3719 4201 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
3720 4202 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
3721 4203 6.425721 CGTCCCAAAATAAGTGTCTCAACTTA 59.574 38.462 0.00 0.00 44.52 2.24
3731 4213 6.824305 AGTGTCTCAACTTATTTTGGGATG 57.176 37.500 0.00 0.00 38.27 3.51
3732 4214 5.711976 AGTGTCTCAACTTATTTTGGGATGG 59.288 40.000 0.00 0.00 38.27 3.51
3733 4215 5.710099 GTGTCTCAACTTATTTTGGGATGGA 59.290 40.000 0.00 0.00 38.27 3.41
3734 4216 5.945784 TGTCTCAACTTATTTTGGGATGGAG 59.054 40.000 0.00 0.00 38.27 3.86
3735 4217 5.358160 GTCTCAACTTATTTTGGGATGGAGG 59.642 44.000 0.00 0.00 38.27 4.30
3736 4218 4.609301 TCAACTTATTTTGGGATGGAGGG 58.391 43.478 0.00 0.00 0.00 4.30
3737 4219 4.293634 TCAACTTATTTTGGGATGGAGGGA 59.706 41.667 0.00 0.00 0.00 4.20
3738 4220 4.526438 ACTTATTTTGGGATGGAGGGAG 57.474 45.455 0.00 0.00 0.00 4.30
3739 4221 3.858638 ACTTATTTTGGGATGGAGGGAGT 59.141 43.478 0.00 0.00 0.00 3.85
3740 4222 5.043762 ACTTATTTTGGGATGGAGGGAGTA 58.956 41.667 0.00 0.00 0.00 2.59
3741 4223 5.132816 ACTTATTTTGGGATGGAGGGAGTAG 59.867 44.000 0.00 0.00 0.00 2.57
3742 4224 2.961536 TTTGGGATGGAGGGAGTAGA 57.038 50.000 0.00 0.00 0.00 2.59
3743 4225 3.438131 TTTGGGATGGAGGGAGTAGAT 57.562 47.619 0.00 0.00 0.00 1.98
3744 4226 4.569676 TTTGGGATGGAGGGAGTAGATA 57.430 45.455 0.00 0.00 0.00 1.98
3745 4227 4.569676 TTGGGATGGAGGGAGTAGATAA 57.430 45.455 0.00 0.00 0.00 1.75
3746 4228 4.785173 TGGGATGGAGGGAGTAGATAAT 57.215 45.455 0.00 0.00 0.00 1.28
3838 4328 3.281727 TTCAGTGTGGGATATTGAGCC 57.718 47.619 0.00 0.00 0.00 4.70
3842 4333 4.019174 CAGTGTGGGATATTGAGCCTTTT 58.981 43.478 0.00 0.00 0.00 2.27
3892 4385 9.120538 ACAAATTACAATATAACTTCCAGCGAT 57.879 29.630 0.00 0.00 0.00 4.58
3943 4436 5.239525 GGTGGGCAGCTAAAATCTATAAGTG 59.760 44.000 0.00 0.00 0.00 3.16
3944 4437 5.823045 GTGGGCAGCTAAAATCTATAAGTGT 59.177 40.000 0.00 0.00 0.00 3.55
3945 4438 6.318900 GTGGGCAGCTAAAATCTATAAGTGTT 59.681 38.462 0.00 0.00 0.00 3.32
3986 4479 5.522460 TGCCTAGAAATAGTGTTACATTCGC 59.478 40.000 0.00 0.00 0.00 4.70
3989 4482 6.757010 CCTAGAAATAGTGTTACATTCGCTGT 59.243 38.462 0.00 0.00 42.13 4.40
4002 4495 4.997395 ACATTCGCTGTGTCTGTAAAATCT 59.003 37.500 0.00 0.00 36.48 2.40
4146 4639 0.555769 TTTGGTTTCAGAGGCCCACT 59.444 50.000 0.00 0.00 0.00 4.00
4218 4711 8.774586 GTGGGTTATGACATAATCAGTGAATAC 58.225 37.037 18.05 1.64 41.91 1.89
4301 4794 7.492352 TTAGTTTTAGAAGTTTCTGCTGGAC 57.508 36.000 4.67 0.00 38.19 4.02
4305 4798 7.442666 AGTTTTAGAAGTTTCTGCTGGACTAAG 59.557 37.037 4.67 0.00 38.19 2.18
4306 4799 6.665992 TTAGAAGTTTCTGCTGGACTAAGA 57.334 37.500 4.67 0.00 38.19 2.10
4477 4970 9.826574 CCAAGTACATTTATTACTAACAGCCTA 57.173 33.333 0.00 0.00 0.00 3.93
4492 4985 9.863650 ACTAACAGCCTAACTATACTCATAGAA 57.136 33.333 0.00 0.00 38.03 2.10
4519 5032 3.202818 ACCATTTCTATGATCAGGTGCCA 59.797 43.478 0.09 0.00 33.37 4.92
4594 5107 4.006319 CTCAATGGACTGAAGAAAGACCC 58.994 47.826 0.00 0.00 31.83 4.46
4600 5113 1.072331 ACTGAAGAAAGACCCATGCGT 59.928 47.619 0.00 0.00 0.00 5.24
4658 5171 9.836076 GAATAAACTTTAATTTGTTAGTCCGCT 57.164 29.630 0.00 0.00 0.00 5.52
4662 5175 2.124277 AATTTGTTAGTCCGCTCCCC 57.876 50.000 0.00 0.00 0.00 4.81
4664 5177 0.611714 TTTGTTAGTCCGCTCCCCTC 59.388 55.000 0.00 0.00 0.00 4.30
4670 5183 2.040442 TCCGCTCCCCTCATGGAA 59.960 61.111 0.00 0.00 35.39 3.53
4675 5188 0.394899 GCTCCCCTCATGGAAACTGG 60.395 60.000 0.00 0.00 35.39 4.00
4682 5195 3.243839 CCCTCATGGAAACTGGTTTGTTG 60.244 47.826 3.30 0.00 35.39 3.33
4687 5200 5.539574 TCATGGAAACTGGTTTGTTGATCAT 59.460 36.000 0.00 0.00 32.11 2.45
4694 5207 8.735692 AAACTGGTTTGTTGATCATTGATTTT 57.264 26.923 0.00 0.00 0.00 1.82
4801 5314 4.261952 CGAGTCATATCCTGCTGTGAGATT 60.262 45.833 0.00 0.00 0.00 2.40
4805 5318 4.590222 TCATATCCTGCTGTGAGATTGCTA 59.410 41.667 0.00 0.00 0.00 3.49
4869 5382 3.272574 TCAATGTGATTGCCTCTCCTC 57.727 47.619 0.00 0.00 40.05 3.71
4926 5439 5.659440 AAATAAATTGGATGGCAGAACGT 57.341 34.783 0.00 0.00 0.00 3.99
4959 5473 3.261897 CCATTTCAGTCCACCACTACTCT 59.738 47.826 0.00 0.00 32.21 3.24
4960 5474 4.466370 CCATTTCAGTCCACCACTACTCTA 59.534 45.833 0.00 0.00 32.21 2.43
4968 5482 6.653320 CAGTCCACCACTACTCTATAGATCTC 59.347 46.154 2.11 0.00 32.21 2.75
4971 5485 7.174253 GTCCACCACTACTCTATAGATCTCAAG 59.826 44.444 2.11 0.00 0.00 3.02
4981 5495 9.342308 ACTCTATAGATCTCAAGAGAACTCAAG 57.658 37.037 28.35 11.11 40.43 3.02
4983 5497 8.498575 TCTATAGATCTCAAGAGAACTCAAGGA 58.501 37.037 12.37 5.91 40.43 3.36
4985 5499 4.466015 AGATCTCAAGAGAACTCAAGGACC 59.534 45.833 3.59 0.00 41.36 4.46
4988 5502 4.061596 CTCAAGAGAACTCAAGGACCAAC 58.938 47.826 4.64 0.00 0.00 3.77
4989 5503 3.711704 TCAAGAGAACTCAAGGACCAACT 59.288 43.478 4.64 0.00 0.00 3.16
4991 5505 5.365605 TCAAGAGAACTCAAGGACCAACTTA 59.634 40.000 4.64 0.00 0.00 2.24
4992 5506 5.476091 AGAGAACTCAAGGACCAACTTAG 57.524 43.478 4.64 0.00 0.00 2.18
4995 5509 5.612351 AGAACTCAAGGACCAACTTAGAAC 58.388 41.667 0.00 0.00 0.00 3.01
4997 5511 5.568620 ACTCAAGGACCAACTTAGAACAT 57.431 39.130 0.00 0.00 0.00 2.71
4998 5512 5.308825 ACTCAAGGACCAACTTAGAACATG 58.691 41.667 0.00 0.00 0.00 3.21
4999 5513 4.072131 TCAAGGACCAACTTAGAACATGC 58.928 43.478 0.00 0.00 0.00 4.06
5000 5514 3.073274 AGGACCAACTTAGAACATGCC 57.927 47.619 0.00 0.00 0.00 4.40
5002 5516 1.737793 GACCAACTTAGAACATGCCGG 59.262 52.381 0.00 0.00 0.00 6.13
5009 5526 2.851263 TAGAACATGCCGGTCACTTT 57.149 45.000 1.90 0.00 0.00 2.66
5057 5658 6.035758 GCACAGTACTATTTGTAAGGCTGTAC 59.964 42.308 0.00 0.00 35.29 2.90
5111 5713 5.902681 TGATAGCAGTATTACACGAAGCTT 58.097 37.500 0.00 0.00 36.50 3.74
5125 5727 5.749109 ACACGAAGCTTTATGAGTATACTGC 59.251 40.000 10.90 6.32 0.00 4.40
5131 5733 9.645059 GAAGCTTTATGAGTATACTGCATATGA 57.355 33.333 10.90 8.62 0.00 2.15
5132 5734 8.994429 AGCTTTATGAGTATACTGCATATGAC 57.006 34.615 10.90 9.35 0.00 3.06
5145 5747 3.565063 TGCATATGACCGGATGTGAATTG 59.435 43.478 9.46 0.00 0.00 2.32
5169 5772 4.413189 TGGAGATCCAAGCCTTGATTCATA 59.587 41.667 5.89 0.00 44.35 2.15
5170 5773 4.759183 GGAGATCCAAGCCTTGATTCATAC 59.241 45.833 5.89 0.00 35.64 2.39
5171 5774 4.384056 AGATCCAAGCCTTGATTCATACG 58.616 43.478 5.89 0.00 0.00 3.06
5172 5775 3.627395 TCCAAGCCTTGATTCATACGT 57.373 42.857 5.89 0.00 0.00 3.57
5192 5797 3.845775 CGTGGCAATGAAAAATGTAGTCG 59.154 43.478 0.00 0.00 0.00 4.18
5207 5812 0.532862 AGTCGTCTTTGCCACTGTGG 60.533 55.000 22.46 22.46 41.55 4.17
5228 5835 5.405571 GTGGTATATTGGCATAGTTGTCTCG 59.594 44.000 0.00 0.00 0.00 4.04
5229 5836 5.303333 TGGTATATTGGCATAGTTGTCTCGA 59.697 40.000 0.00 0.00 0.00 4.04
5231 5838 7.177744 TGGTATATTGGCATAGTTGTCTCGATA 59.822 37.037 0.00 0.00 0.00 2.92
5232 5839 8.198109 GGTATATTGGCATAGTTGTCTCGATAT 58.802 37.037 0.00 0.00 0.00 1.63
5233 5840 9.587772 GTATATTGGCATAGTTGTCTCGATATT 57.412 33.333 0.00 0.00 0.00 1.28
5235 5842 5.529581 TGGCATAGTTGTCTCGATATTGA 57.470 39.130 0.00 0.00 0.00 2.57
5236 5843 6.101650 TGGCATAGTTGTCTCGATATTGAT 57.898 37.500 0.00 0.00 0.00 2.57
5237 5844 6.524734 TGGCATAGTTGTCTCGATATTGATT 58.475 36.000 0.00 0.00 0.00 2.57
5239 5846 7.041848 TGGCATAGTTGTCTCGATATTGATTTG 60.042 37.037 0.00 0.00 0.00 2.32
5240 5847 6.794158 GCATAGTTGTCTCGATATTGATTTGC 59.206 38.462 0.00 0.00 0.00 3.68
5249 6121 9.591404 GTCTCGATATTGATTTGCTAATTTCTG 57.409 33.333 0.00 0.00 0.00 3.02
5257 6129 6.642430 TGATTTGCTAATTTCTGAATTGGGG 58.358 36.000 0.00 0.00 36.22 4.96
5339 6216 0.679505 TGGGTATGGCTGACGCTATC 59.320 55.000 7.65 0.00 38.40 2.08
5396 6273 9.793252 CGTGAGAATAATTTGAAGGAAATTGAT 57.207 29.630 0.00 0.00 42.98 2.57
5403 6280 6.684897 ATTTGAAGGAAATTGATGGTGGAA 57.315 33.333 0.00 0.00 29.22 3.53
5405 6282 5.920193 TGAAGGAAATTGATGGTGGAATC 57.080 39.130 0.00 0.00 0.00 2.52
5424 6301 5.405935 AATCATTTTGGAAAGCCAGGTAC 57.594 39.130 0.00 0.00 46.91 3.34
5425 6302 4.112634 TCATTTTGGAAAGCCAGGTACT 57.887 40.909 0.00 0.00 46.91 2.73
5428 6305 3.876309 TTTGGAAAGCCAGGTACTCTT 57.124 42.857 0.00 0.00 46.91 2.85
5429 6306 2.859165 TGGAAAGCCAGGTACTCTTG 57.141 50.000 0.00 0.00 39.92 3.02
5439 6320 1.291877 GGTACTCTTGCACACAGGCG 61.292 60.000 0.00 0.00 36.28 5.52
5457 6338 3.121030 CGGGCTCGCAAAGGACAG 61.121 66.667 0.00 0.00 0.00 3.51
5505 6387 3.128589 TCAAAGTGAAAACCTGTGCTCAC 59.871 43.478 4.61 4.61 38.77 3.51
5522 6404 4.826733 TGCTCACTTTGTTATGTGTCCAAT 59.173 37.500 0.00 0.00 35.82 3.16
5528 6410 8.151596 TCACTTTGTTATGTGTCCAATACTACA 58.848 33.333 0.00 0.00 35.82 2.74
5567 6449 5.936956 AGCAAGTAAGAAATCTCTGAACAGG 59.063 40.000 1.93 0.00 30.03 4.00
5597 6479 6.533730 AGGTGTGTTAGAGATTTCACATGAA 58.466 36.000 0.00 0.00 41.64 2.57
5652 6534 5.468746 GCGTCTGGCAAGATAATGGTAAATA 59.531 40.000 0.00 0.00 42.87 1.40
5683 6566 7.624360 TCTTTGATGTCACATTATTACACCC 57.376 36.000 0.00 0.00 0.00 4.61
5684 6567 7.171653 TCTTTGATGTCACATTATTACACCCA 58.828 34.615 0.00 0.00 0.00 4.51
5702 6585 7.687941 ACACCCAGTTGATTGATTAACTTAG 57.312 36.000 0.00 0.00 34.82 2.18
5813 6698 9.896645 ATCATTATGTGGATTACAGGTATCATC 57.103 33.333 0.00 0.00 43.80 2.92
5848 6733 8.451908 AAGTACTTCAGTAGCAAAGAACATTT 57.548 30.769 1.12 0.00 0.00 2.32
5849 6734 8.089115 AGTACTTCAGTAGCAAAGAACATTTC 57.911 34.615 0.00 0.00 0.00 2.17
5851 6736 9.204570 GTACTTCAGTAGCAAAGAACATTTCTA 57.795 33.333 0.00 0.00 39.61 2.10
6009 7058 2.860735 CGCTCTACAAATGTAGCACCTC 59.139 50.000 14.37 2.85 45.69 3.85
6017 7069 3.377346 AATGTAGCACCTCTATCTGCG 57.623 47.619 0.00 0.00 38.51 5.18
6026 7078 5.048364 AGCACCTCTATCTGCGTCTTATTAG 60.048 44.000 0.00 0.00 38.51 1.73
6034 7086 5.469373 TCTGCGTCTTATTAGTTTGCATG 57.531 39.130 0.00 0.00 0.00 4.06
6053 7105 1.202639 TGATTATAGCCTGTGCCCACG 60.203 52.381 0.00 0.00 38.69 4.94
6060 7112 0.885196 GCCTGTGCCCACGAAATAAA 59.115 50.000 0.00 0.00 0.00 1.40
6077 7130 6.688385 CGAAATAAACGATGCAGATGTTTGAT 59.312 34.615 18.55 8.48 36.56 2.57
6080 7133 4.346734 AACGATGCAGATGTTTGATCAC 57.653 40.909 0.00 0.00 0.00 3.06
6082 7135 3.752747 ACGATGCAGATGTTTGATCACAA 59.247 39.130 0.00 0.00 0.00 3.33
6091 7144 8.642020 GCAGATGTTTGATCACAAAATTTCTAC 58.358 33.333 0.00 0.00 45.65 2.59
6109 7162 1.318576 ACCCCTTTGAAGCGAAAGTG 58.681 50.000 0.00 0.00 31.96 3.16
6144 7197 6.590656 TCTATTATTTCTGTTGGGGTCCAT 57.409 37.500 0.00 0.00 31.53 3.41
6156 7209 5.851693 TGTTGGGGTCCATAATATCTCTCAT 59.148 40.000 0.00 0.00 31.53 2.90
6193 7247 4.492494 TGTGACATCTGTAGCATCCATT 57.508 40.909 0.00 0.00 0.00 3.16
6224 7278 6.071616 GGCCAAATTCCAATTGTAGTCTTGTA 60.072 38.462 4.43 0.00 0.00 2.41
6230 7286 5.245531 TCCAATTGTAGTCTTGTAGCCTTG 58.754 41.667 4.43 0.00 0.00 3.61
6234 7290 4.451629 TGTAGTCTTGTAGCCTTGTAGC 57.548 45.455 0.00 0.00 0.00 3.58
6235 7291 3.194968 TGTAGTCTTGTAGCCTTGTAGCC 59.805 47.826 0.00 0.00 0.00 3.93
6237 7293 2.907042 AGTCTTGTAGCCTTGTAGCCTT 59.093 45.455 0.00 0.00 0.00 4.35
6238 7294 3.328050 AGTCTTGTAGCCTTGTAGCCTTT 59.672 43.478 0.00 0.00 0.00 3.11
6240 7296 5.012768 AGTCTTGTAGCCTTGTAGCCTTTTA 59.987 40.000 0.00 0.00 0.00 1.52
6241 7297 5.351740 GTCTTGTAGCCTTGTAGCCTTTTAG 59.648 44.000 0.00 0.00 0.00 1.85
6242 7298 4.216411 TGTAGCCTTGTAGCCTTTTAGG 57.784 45.455 0.00 0.00 38.80 2.69
6243 7299 3.585732 TGTAGCCTTGTAGCCTTTTAGGT 59.414 43.478 0.00 0.00 37.80 3.08
6244 7300 3.351794 AGCCTTGTAGCCTTTTAGGTC 57.648 47.619 0.00 0.00 37.80 3.85
6245 7301 2.026169 AGCCTTGTAGCCTTTTAGGTCC 60.026 50.000 0.00 0.00 37.80 4.46
6246 7302 2.944542 GCCTTGTAGCCTTTTAGGTCCC 60.945 54.545 0.00 0.00 37.80 4.46
6247 7303 2.576648 CCTTGTAGCCTTTTAGGTCCCT 59.423 50.000 0.00 0.00 37.80 4.20
6248 7304 3.010250 CCTTGTAGCCTTTTAGGTCCCTT 59.990 47.826 0.00 0.00 37.80 3.95
6249 7305 3.994931 TGTAGCCTTTTAGGTCCCTTC 57.005 47.619 0.00 0.00 37.80 3.46
6314 7370 3.691118 TCTTGATTGCTAATCCACACTGC 59.309 43.478 6.47 0.00 37.09 4.40
6332 7388 8.196771 CCACACTGCAATATTGTTAAATATGGT 58.803 33.333 16.61 1.64 38.67 3.55
6377 7433 8.306038 TGAACTCAAACTTATGATTCCATTTGG 58.694 33.333 0.00 0.00 34.31 3.28
6386 7442 7.620888 ACTTATGATTCCATTTGGTCCATCTTT 59.379 33.333 0.00 0.00 36.34 2.52
6533 7589 2.724977 TCTGTAAGTTGTCTGCCTCG 57.275 50.000 0.00 0.00 33.76 4.63
6597 7653 6.210385 TCCTGTTGGCAGCAATTTATTCTTAA 59.790 34.615 5.33 0.00 41.26 1.85
6599 7655 6.397272 TGTTGGCAGCAATTTATTCTTAAGG 58.603 36.000 0.00 0.00 0.00 2.69
6650 7706 7.413109 GCAGGCAGTTATTCTCAACTAAGTAAC 60.413 40.741 0.00 0.00 36.61 2.50
6808 7897 2.081462 CCCGTTCATTACAACCAGGAC 58.919 52.381 0.00 0.00 0.00 3.85
6809 7898 2.081462 CCGTTCATTACAACCAGGACC 58.919 52.381 0.00 0.00 0.00 4.46
6810 7899 2.551287 CCGTTCATTACAACCAGGACCA 60.551 50.000 0.00 0.00 0.00 4.02
6811 7900 2.742053 CGTTCATTACAACCAGGACCAG 59.258 50.000 0.00 0.00 0.00 4.00
6812 7901 3.081804 GTTCATTACAACCAGGACCAGG 58.918 50.000 0.33 0.33 0.00 4.45
6813 7902 2.626785 TCATTACAACCAGGACCAGGA 58.373 47.619 10.44 0.00 0.00 3.86
6983 8072 5.131067 GGAATCGGAAGGTTTTAGGCTTAT 58.869 41.667 0.00 0.00 32.13 1.73
6984 8073 6.126710 TGGAATCGGAAGGTTTTAGGCTTATA 60.127 38.462 0.00 0.00 32.13 0.98
6985 8074 6.427242 GGAATCGGAAGGTTTTAGGCTTATAG 59.573 42.308 0.00 0.00 32.13 1.31
6986 8075 5.945144 TCGGAAGGTTTTAGGCTTATAGT 57.055 39.130 0.00 0.00 0.00 2.12
6988 8077 7.047460 TCGGAAGGTTTTAGGCTTATAGTAG 57.953 40.000 0.00 0.00 0.00 2.57
6989 8078 6.835488 TCGGAAGGTTTTAGGCTTATAGTAGA 59.165 38.462 0.00 0.00 0.00 2.59
6990 8079 7.342799 TCGGAAGGTTTTAGGCTTATAGTAGAA 59.657 37.037 0.00 0.00 0.00 2.10
6991 8080 7.437565 CGGAAGGTTTTAGGCTTATAGTAGAAC 59.562 40.741 0.00 0.00 0.00 3.01
6992 8081 8.484575 GGAAGGTTTTAGGCTTATAGTAGAACT 58.515 37.037 0.00 0.00 0.00 3.01
7147 8240 5.685954 CGATGAAGATTTGAGCCATTGAATG 59.314 40.000 0.00 0.00 0.00 2.67
7244 8337 0.878961 GTTCTATCGGGCGGCGATTT 60.879 55.000 12.98 2.83 0.00 2.17
7348 8442 1.078214 AGATGGATGTGTGGCCACG 60.078 57.895 30.07 0.00 44.92 4.94
7356 8450 2.124109 TGTGGCCACGCAAGGAAA 60.124 55.556 30.07 7.85 46.39 3.13
7378 8475 9.838339 GGAAAGATGTCCGGAATGATAATATAT 57.162 33.333 5.23 0.00 0.00 0.86
7603 8701 2.158900 ACCAAAGATCTAGCCATGGACG 60.159 50.000 18.40 2.09 0.00 4.79
7711 8809 4.714802 ACTTGTTTGGGACTAAAGGCTTTT 59.285 37.500 18.93 0.00 0.00 2.27
7712 8810 5.188948 ACTTGTTTGGGACTAAAGGCTTTTT 59.811 36.000 18.93 5.62 0.00 1.94
7827 9768 5.497464 TCCACAATAGGACAACTTGATGA 57.503 39.130 0.00 0.00 31.23 2.92
7881 9825 8.958119 AACACACATATGGTATTGGTACTTAG 57.042 34.615 7.80 0.00 0.00 2.18
7902 9846 9.547753 ACTTAGCATACAGTATGGTTCTTTATG 57.452 33.333 26.31 14.27 43.77 1.90
7938 9882 7.366847 ACATCTAATACTTGTATGTGCTCCT 57.633 36.000 0.00 0.00 29.93 3.69
7971 9916 3.818787 CAGATTGGTGGCAGCGGC 61.819 66.667 12.58 0.00 40.13 6.53
8028 9973 1.153549 GACTCCTAGGTGGCGCAAG 60.154 63.158 10.83 2.97 35.26 4.01
8054 9999 1.153289 CGGAGCTGGGAATGTGAGG 60.153 63.158 0.00 0.00 0.00 3.86
8058 10003 0.034670 AGCTGGGAATGTGAGGCTTC 60.035 55.000 0.00 0.00 0.00 3.86
8079 10024 2.270205 CAAGGTCGGCCATGCTCT 59.730 61.111 9.71 0.00 37.19 4.09
8103 10048 2.621055 CCTCTAGAATGGACCGTCTCAG 59.379 54.545 0.86 0.39 0.00 3.35
8104 10049 3.283751 CTCTAGAATGGACCGTCTCAGT 58.716 50.000 0.86 0.00 0.00 3.41
8202 10151 0.112412 AAGTGAACCCCCATGTGGAC 59.888 55.000 0.00 0.00 37.39 4.02
8294 10243 7.394923 CAGTGGTTGGTTTATCCCTTTTATGTA 59.605 37.037 0.00 0.00 34.77 2.29
8295 10244 7.395206 AGTGGTTGGTTTATCCCTTTTATGTAC 59.605 37.037 0.00 0.00 34.77 2.90
8375 10324 2.407090 GATCTTGCACCTTTTGTTGGC 58.593 47.619 0.00 0.00 0.00 4.52
8412 10361 3.806975 TGGGGCTACCTGATATGATGAT 58.193 45.455 0.00 0.00 41.11 2.45
8442 10391 0.881118 CCCATTGTGGTTTGGTCTCG 59.119 55.000 0.00 0.00 35.17 4.04
8445 10394 1.953686 CATTGTGGTTTGGTCTCGGTT 59.046 47.619 0.00 0.00 0.00 4.44
8463 10412 0.245266 TTGCGTGGCGAGTCTATTCA 59.755 50.000 0.00 0.00 0.00 2.57
8490 10440 2.606725 CCATCTGAAATGCTCGTGTCTC 59.393 50.000 0.00 0.00 0.00 3.36
8501 10451 0.040336 TCGTGTCTCGCTGTTCTCAC 60.040 55.000 0.00 0.00 39.67 3.51
8509 10459 0.321564 CGCTGTTCTCACCCCATTCA 60.322 55.000 0.00 0.00 0.00 2.57
8518 10468 2.686915 CTCACCCCATTCAGAATTGCTC 59.313 50.000 0.00 0.00 0.00 4.26
8534 10484 1.284657 GCTCGTCACATCCATGTCTG 58.715 55.000 0.00 0.00 39.39 3.51
8545 10495 4.081752 ACATCCATGTCTGTCTGTCTCTTC 60.082 45.833 0.00 0.00 35.87 2.87
8562 10512 6.708502 TGTCTCTTCTCTGTATATCTCTTCCG 59.291 42.308 0.00 0.00 0.00 4.30
8565 10515 5.239744 TCTTCTCTGTATATCTCTTCCGTGC 59.760 44.000 0.00 0.00 0.00 5.34
8568 10518 3.570125 TCTGTATATCTCTTCCGTGCCAG 59.430 47.826 0.00 0.00 0.00 4.85
8571 10521 0.747255 TATCTCTTCCGTGCCAGCTC 59.253 55.000 0.00 0.00 0.00 4.09
8587 10537 2.670414 CAGCTCTGAGAAATGGTTCGTC 59.330 50.000 9.28 0.00 38.90 4.20
8588 10538 1.656095 GCTCTGAGAAATGGTTCGTCG 59.344 52.381 9.28 0.00 38.90 5.12
8687 10641 4.080863 ACGCATCTGGGATTTCTAAAGTCT 60.081 41.667 0.83 0.00 0.00 3.24
8691 10645 4.579869 TCTGGGATTTCTAAAGTCTGTGC 58.420 43.478 0.00 0.00 0.00 4.57
8692 10646 4.041567 TCTGGGATTTCTAAAGTCTGTGCA 59.958 41.667 0.00 0.00 0.00 4.57
8698 10652 2.977914 TCTAAAGTCTGTGCATGCTCC 58.022 47.619 20.33 10.07 0.00 4.70
8844 10810 8.876275 TGCCACGTTTATTAATAAGTAGTAGG 57.124 34.615 7.91 12.40 0.00 3.18
8865 10831 5.742063 AGGAGTTTAACAATGGGTACTAGC 58.258 41.667 0.00 0.00 0.00 3.42
8866 10832 4.880120 GGAGTTTAACAATGGGTACTAGCC 59.120 45.833 0.00 0.00 36.00 3.93
8867 10833 5.338953 GGAGTTTAACAATGGGTACTAGCCT 60.339 44.000 5.88 0.00 36.53 4.58
8881 10847 4.164843 ACTAGCCTGAAGGTCAAAACAA 57.835 40.909 0.00 0.00 37.57 2.83
8886 10852 4.405358 AGCCTGAAGGTCAAAACAAAATGA 59.595 37.500 0.00 0.00 37.57 2.57
8887 10853 4.746611 GCCTGAAGGTCAAAACAAAATGAG 59.253 41.667 0.00 0.00 37.57 2.90
8896 10862 6.362283 GGTCAAAACAAAATGAGTAATGTCCG 59.638 38.462 0.00 0.00 0.00 4.79
8897 10863 6.362283 GTCAAAACAAAATGAGTAATGTCCGG 59.638 38.462 0.00 0.00 0.00 5.14
8898 10864 6.263392 TCAAAACAAAATGAGTAATGTCCGGA 59.737 34.615 0.00 0.00 0.00 5.14
8899 10865 5.622770 AACAAAATGAGTAATGTCCGGAC 57.377 39.130 28.17 28.17 0.00 4.79
8919 10885 6.038936 CCGGACATAAATTTATTTCCTCCGTT 59.961 38.462 28.44 0.00 37.68 4.44
8920 10886 7.415877 CCGGACATAAATTTATTTCCTCCGTTT 60.416 37.037 28.44 0.00 37.68 3.60
8923 10889 9.285770 GACATAAATTTATTTCCTCCGTTTCAC 57.714 33.333 8.01 0.00 0.00 3.18
8935 10901 2.477375 TCCGTTTCACAATGTAAGACGC 59.523 45.455 0.00 0.00 0.00 5.19
9000 10966 5.208294 AGGACAGAGGTATTAGACTGGAA 57.792 43.478 0.00 0.00 35.08 3.53
9022 10988 3.302375 CAAGTGTGCTGCTGTCTCT 57.698 52.632 0.00 0.00 0.00 3.10
9030 10996 0.735632 GCTGCTGTCTCTGGAGTTCG 60.736 60.000 0.00 0.00 0.00 3.95
9038 11004 0.249868 CTCTGGAGTTCGGTTGCACA 60.250 55.000 0.00 0.00 0.00 4.57
9052 11018 1.769026 TGCACAAAGGGCAAACTACA 58.231 45.000 0.00 0.00 38.54 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 8.899427 TGAAATGGTTCAAATCATGCTAAAAA 57.101 26.923 0.00 0.00 40.87 1.94
18 19 8.366401 TCTGAAATGGTTCAAATCATGCTAAAA 58.634 29.630 0.00 0.00 43.18 1.52
19 20 7.894708 TCTGAAATGGTTCAAATCATGCTAAA 58.105 30.769 0.00 0.00 43.18 1.85
20 21 7.465353 TCTGAAATGGTTCAAATCATGCTAA 57.535 32.000 0.00 0.00 43.18 3.09
21 22 7.649533 ATCTGAAATGGTTCAAATCATGCTA 57.350 32.000 0.00 0.00 43.18 3.49
22 23 5.988310 TCTGAAATGGTTCAAATCATGCT 57.012 34.783 0.00 0.00 43.18 3.79
23 24 7.605410 AAATCTGAAATGGTTCAAATCATGC 57.395 32.000 0.00 0.00 43.18 4.06
24 25 8.995220 ACAAAATCTGAAATGGTTCAAATCATG 58.005 29.630 0.00 0.00 43.18 3.07
26 27 9.695526 CTACAAAATCTGAAATGGTTCAAATCA 57.304 29.630 0.00 0.00 43.18 2.57
27 28 8.650714 GCTACAAAATCTGAAATGGTTCAAATC 58.349 33.333 0.00 0.00 43.18 2.17
28 29 8.149647 TGCTACAAAATCTGAAATGGTTCAAAT 58.850 29.630 0.00 0.00 43.18 2.32
29 30 7.437862 GTGCTACAAAATCTGAAATGGTTCAAA 59.562 33.333 0.00 0.00 43.18 2.69
30 31 6.922957 GTGCTACAAAATCTGAAATGGTTCAA 59.077 34.615 0.00 0.00 43.18 2.69
31 32 6.446318 GTGCTACAAAATCTGAAATGGTTCA 58.554 36.000 0.00 0.00 41.57 3.18
32 33 5.569059 CGTGCTACAAAATCTGAAATGGTTC 59.431 40.000 0.00 0.00 0.00 3.62
33 34 5.240623 TCGTGCTACAAAATCTGAAATGGTT 59.759 36.000 0.00 0.00 0.00 3.67
34 35 4.759693 TCGTGCTACAAAATCTGAAATGGT 59.240 37.500 0.00 0.00 0.00 3.55
35 36 5.295431 TCGTGCTACAAAATCTGAAATGG 57.705 39.130 0.00 0.00 0.00 3.16
36 37 8.337532 TCATATCGTGCTACAAAATCTGAAATG 58.662 33.333 0.00 0.00 0.00 2.32
37 38 8.437360 TCATATCGTGCTACAAAATCTGAAAT 57.563 30.769 0.00 0.00 0.00 2.17
38 39 7.841915 TCATATCGTGCTACAAAATCTGAAA 57.158 32.000 0.00 0.00 0.00 2.69
39 40 7.171508 GGATCATATCGTGCTACAAAATCTGAA 59.828 37.037 0.00 0.00 0.00 3.02
40 41 6.646653 GGATCATATCGTGCTACAAAATCTGA 59.353 38.462 0.00 0.00 0.00 3.27
41 42 6.648310 AGGATCATATCGTGCTACAAAATCTG 59.352 38.462 0.00 0.00 0.00 2.90
42 43 6.763355 AGGATCATATCGTGCTACAAAATCT 58.237 36.000 0.00 0.00 0.00 2.40
43 44 6.870965 AGAGGATCATATCGTGCTACAAAATC 59.129 38.462 0.00 0.00 37.82 2.17
44 45 6.763355 AGAGGATCATATCGTGCTACAAAAT 58.237 36.000 0.00 0.00 37.82 1.82
45 46 6.161855 AGAGGATCATATCGTGCTACAAAA 57.838 37.500 0.00 0.00 37.82 2.44
46 47 5.791336 AGAGGATCATATCGTGCTACAAA 57.209 39.130 0.00 0.00 37.82 2.83
47 48 5.069119 ACAAGAGGATCATATCGTGCTACAA 59.931 40.000 0.00 0.00 37.82 2.41
48 49 4.584743 ACAAGAGGATCATATCGTGCTACA 59.415 41.667 0.00 0.00 37.82 2.74
49 50 5.127693 ACAAGAGGATCATATCGTGCTAC 57.872 43.478 0.00 0.00 37.82 3.58
50 51 5.791336 AACAAGAGGATCATATCGTGCTA 57.209 39.130 0.00 0.00 37.82 3.49
51 52 4.679373 AACAAGAGGATCATATCGTGCT 57.321 40.909 0.00 0.00 37.82 4.40
52 53 5.107837 CGTTAACAAGAGGATCATATCGTGC 60.108 44.000 6.39 0.00 37.82 5.34
53 54 5.107837 GCGTTAACAAGAGGATCATATCGTG 60.108 44.000 6.39 0.85 37.82 4.35
54 55 4.982916 GCGTTAACAAGAGGATCATATCGT 59.017 41.667 6.39 0.00 37.82 3.73
55 56 4.386049 GGCGTTAACAAGAGGATCATATCG 59.614 45.833 6.39 0.00 37.82 2.92
56 57 5.297547 TGGCGTTAACAAGAGGATCATATC 58.702 41.667 6.39 0.00 37.82 1.63
57 58 5.290493 TGGCGTTAACAAGAGGATCATAT 57.710 39.130 6.39 0.00 37.82 1.78
58 59 4.746535 TGGCGTTAACAAGAGGATCATA 57.253 40.909 6.39 0.00 37.82 2.15
59 60 3.627395 TGGCGTTAACAAGAGGATCAT 57.373 42.857 6.39 0.00 37.82 2.45
60 61 3.055458 TCATGGCGTTAACAAGAGGATCA 60.055 43.478 6.39 0.00 37.82 2.92
61 62 3.309954 GTCATGGCGTTAACAAGAGGATC 59.690 47.826 6.39 0.00 0.00 3.36
62 63 3.055094 AGTCATGGCGTTAACAAGAGGAT 60.055 43.478 6.39 0.00 0.00 3.24
63 64 2.301870 AGTCATGGCGTTAACAAGAGGA 59.698 45.455 6.39 0.00 0.00 3.71
64 65 2.699954 AGTCATGGCGTTAACAAGAGG 58.300 47.619 6.39 0.00 0.00 3.69
65 66 3.498397 ACAAGTCATGGCGTTAACAAGAG 59.502 43.478 6.39 0.00 0.00 2.85
66 67 3.249799 CACAAGTCATGGCGTTAACAAGA 59.750 43.478 6.39 0.00 0.00 3.02
67 68 3.554524 CACAAGTCATGGCGTTAACAAG 58.445 45.455 6.39 0.00 0.00 3.16
68 69 2.292016 CCACAAGTCATGGCGTTAACAA 59.708 45.455 6.39 0.00 0.00 2.83
69 70 1.876799 CCACAAGTCATGGCGTTAACA 59.123 47.619 6.39 0.00 0.00 2.41
70 71 2.611974 CCACAAGTCATGGCGTTAAC 57.388 50.000 0.00 0.00 0.00 2.01
77 78 2.126467 CAAAAACGCCACAAGTCATGG 58.874 47.619 0.00 0.00 40.50 3.66
78 79 1.522258 GCAAAAACGCCACAAGTCATG 59.478 47.619 0.00 0.00 0.00 3.07
79 80 1.408702 AGCAAAAACGCCACAAGTCAT 59.591 42.857 0.00 0.00 0.00 3.06
80 81 0.814457 AGCAAAAACGCCACAAGTCA 59.186 45.000 0.00 0.00 0.00 3.41
81 82 1.477105 GAGCAAAAACGCCACAAGTC 58.523 50.000 0.00 0.00 0.00 3.01
82 83 0.248458 CGAGCAAAAACGCCACAAGT 60.248 50.000 0.00 0.00 0.00 3.16
83 84 0.028770 TCGAGCAAAAACGCCACAAG 59.971 50.000 0.00 0.00 0.00 3.16
101 102 2.258726 GGTTTGGCGTGTCTGGGTC 61.259 63.158 0.00 0.00 0.00 4.46
105 106 1.358759 GTTGGGTTTGGCGTGTCTG 59.641 57.895 0.00 0.00 0.00 3.51
113 114 3.132824 AGAAGAAGCTTTGTTGGGTTTGG 59.867 43.478 0.00 0.00 0.00 3.28
120 121 7.664082 TCTATTCTCAGAAGAAGCTTTGTTG 57.336 36.000 0.00 0.00 44.53 3.33
125 126 9.598517 CAACTTATCTATTCTCAGAAGAAGCTT 57.401 33.333 0.00 0.00 44.53 3.74
128 129 7.984050 TGGCAACTTATCTATTCTCAGAAGAAG 59.016 37.037 0.00 0.00 40.64 2.85
190 217 3.882888 ACCATATGGCGTTACTGGAAATG 59.117 43.478 22.18 0.00 39.32 2.32
191 218 4.164843 ACCATATGGCGTTACTGGAAAT 57.835 40.909 22.18 0.00 39.32 2.17
223 250 2.514592 CACCTACATGGCAGGGCG 60.515 66.667 17.27 6.71 40.22 6.13
246 273 2.101415 CCATGATCTGGTCGAGTAGCAA 59.899 50.000 0.00 0.00 40.49 3.91
282 309 0.827507 AGAAATGCCAAACCGCCTGT 60.828 50.000 0.00 0.00 0.00 4.00
309 336 0.677731 ATGGCTTGCTGCGCTTCTAA 60.678 50.000 9.73 0.00 44.05 2.10
313 340 3.755628 CCATGGCTTGCTGCGCTT 61.756 61.111 9.73 0.00 44.05 4.68
319 346 1.532316 AGCAACACCATGGCTTGCT 60.532 52.632 31.27 31.27 44.59 3.91
353 380 9.981114 AATAACCTTCTTCGAAATTTTGAACAT 57.019 25.926 15.57 3.39 0.00 2.71
366 393 9.626045 AATTTTAGAGCAAAATAACCTTCTTCG 57.374 29.630 0.00 0.00 44.37 3.79
1326 1758 5.989551 ACAAAATCAGCAAAAACCATCAC 57.010 34.783 0.00 0.00 0.00 3.06
1327 1759 5.220815 GCAACAAAATCAGCAAAAACCATCA 60.221 36.000 0.00 0.00 0.00 3.07
1328 1760 5.007921 AGCAACAAAATCAGCAAAAACCATC 59.992 36.000 0.00 0.00 0.00 3.51
1329 1761 4.883006 AGCAACAAAATCAGCAAAAACCAT 59.117 33.333 0.00 0.00 0.00 3.55
1410 1852 2.061578 TGGGATGTCGGCGGTGTAT 61.062 57.895 7.21 0.00 0.00 2.29
1428 1870 1.821753 CGGAGATGAGAACTCACCTGT 59.178 52.381 4.96 0.00 43.11 4.00
1461 1908 2.686405 TGCCTAGATACGGTACACAGTG 59.314 50.000 0.00 0.00 0.00 3.66
1464 1911 3.558033 TCATGCCTAGATACGGTACACA 58.442 45.455 0.00 0.00 0.00 3.72
1466 1913 4.094830 TCTCATGCCTAGATACGGTACA 57.905 45.455 0.00 0.00 0.00 2.90
1468 1915 4.519350 CACTTCTCATGCCTAGATACGGTA 59.481 45.833 0.00 0.00 0.00 4.02
1483 1930 3.755905 TCACAGCAACAAAACACTTCTCA 59.244 39.130 0.00 0.00 0.00 3.27
1524 1971 0.622665 CCAATCAGGGCCTGAAGACT 59.377 55.000 37.86 20.52 44.04 3.24
1571 2018 1.375551 AACTGTCAAACCACGGTGTC 58.624 50.000 7.45 0.00 35.95 3.67
1583 2030 8.407064 ACGTTAAACAAATCCAATAAACTGTCA 58.593 29.630 0.00 0.00 0.00 3.58
1592 2039 8.250332 AGCAATGATACGTTAAACAAATCCAAT 58.750 29.630 0.00 0.00 0.00 3.16
1607 2054 2.159920 GCTGCATACGAGCAATGATACG 60.160 50.000 0.00 0.00 45.13 3.06
1612 2059 0.042708 GACGCTGCATACGAGCAATG 60.043 55.000 15.32 0.00 45.13 2.82
1633 2080 6.560253 AGGTACAGTGTTTAAGCATGAAAG 57.440 37.500 0.00 0.00 0.00 2.62
1650 2097 1.897423 CAGGACATGCCGAGGTACA 59.103 57.895 0.00 0.00 43.43 2.90
1678 2125 6.294342 CCCCATGCTAATGTCAATTGTAGATG 60.294 42.308 5.13 6.01 31.27 2.90
1681 2128 4.261741 GCCCCATGCTAATGTCAATTGTAG 60.262 45.833 5.13 1.01 36.87 2.74
1778 2226 5.615925 AACCGATGCTCCTCTAACTATTT 57.384 39.130 0.00 0.00 0.00 1.40
1883 2335 7.368480 TCTGCAATATTATGGACAATCGATG 57.632 36.000 0.00 0.00 0.00 3.84
2019 2490 4.355543 ACTACAACACAAAGCAACACAG 57.644 40.909 0.00 0.00 0.00 3.66
2077 2548 3.636764 ACTTGTTTGGGACTAAAGGCTTG 59.363 43.478 0.00 0.00 0.00 4.01
2389 2861 3.031736 GAGATAGAGTTGGGGTAGCACA 58.968 50.000 0.00 0.00 0.00 4.57
2457 2929 3.722147 GGAGATGCGTATGTTGAGATGT 58.278 45.455 0.00 0.00 0.00 3.06
2554 3026 2.748388 AGGCAAGTTCTATAGGACGGT 58.252 47.619 5.49 0.00 0.00 4.83
2562 3034 7.147976 CACAAAAGCTAAAAGGCAAGTTCTAT 58.852 34.615 0.00 0.00 34.17 1.98
2686 3158 3.186409 CGATATTTGGGGTCAATGCTACG 59.814 47.826 0.00 0.00 32.28 3.51
2749 3221 1.149782 AGGTGTGAGGAGGAGGAGGA 61.150 60.000 0.00 0.00 0.00 3.71
2770 3248 4.465632 TGATGTGCGGTTTCAGTACTAT 57.534 40.909 0.00 0.00 0.00 2.12
2799 3277 9.458727 GGGTTTAGGCTTAGTAGAACTAAAATT 57.541 33.333 0.00 0.00 39.89 1.82
2800 3278 8.833734 AGGGTTTAGGCTTAGTAGAACTAAAAT 58.166 33.333 0.00 0.00 39.89 1.82
2933 3411 5.227593 AGGTCACAAGGGATATACAAGGAT 58.772 41.667 0.00 0.00 0.00 3.24
3105 3584 1.609072 GAGAAACACAAAGTCCCAGCC 59.391 52.381 0.00 0.00 0.00 4.85
3132 3611 2.038426 ACCGAGAAATGTCATGTGGTGA 59.962 45.455 0.00 0.00 0.00 4.02
3147 3626 5.194473 AGGCCTATGATAAGATACCGAGA 57.806 43.478 1.29 0.00 0.00 4.04
3264 3746 0.776810 TTGGTTTCATGCCTGGGAGA 59.223 50.000 0.00 0.00 0.00 3.71
3299 3781 5.637810 CACCGCTTAAGAAGAATGACAAGTA 59.362 40.000 6.67 0.00 0.00 2.24
3300 3782 4.452455 CACCGCTTAAGAAGAATGACAAGT 59.548 41.667 6.67 0.00 0.00 3.16
3440 3922 6.509418 TGAATAACTGGTTGCATAAGTTCC 57.491 37.500 11.23 5.23 35.77 3.62
3480 3962 8.257602 ACCCAACAAATTAGATTTACAGGTTT 57.742 30.769 0.00 0.00 0.00 3.27
3615 4097 5.828299 TGAACAAACTCCAAACCTAACTG 57.172 39.130 0.00 0.00 0.00 3.16
3647 4129 4.623595 CCAAATACGCATTACCCAACAAAC 59.376 41.667 0.00 0.00 0.00 2.93
3691 4173 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
3692 4174 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3693 4175 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
3695 4177 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
3696 4178 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
3697 4179 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
3706 4188 7.393234 CCATCCCAAAATAAGTTGAGACACTTA 59.607 37.037 0.00 0.00 42.22 2.24
3707 4189 6.209391 CCATCCCAAAATAAGTTGAGACACTT 59.791 38.462 0.00 0.00 40.28 3.16
3708 4190 5.711976 CCATCCCAAAATAAGTTGAGACACT 59.288 40.000 0.00 0.00 0.00 3.55
3709 4191 5.710099 TCCATCCCAAAATAAGTTGAGACAC 59.290 40.000 0.00 0.00 0.00 3.67
3710 4192 5.886609 TCCATCCCAAAATAAGTTGAGACA 58.113 37.500 0.00 0.00 0.00 3.41
3711 4193 5.358160 CCTCCATCCCAAAATAAGTTGAGAC 59.642 44.000 0.00 0.00 0.00 3.36
3712 4194 5.509498 CCTCCATCCCAAAATAAGTTGAGA 58.491 41.667 0.00 0.00 0.00 3.27
3713 4195 4.646492 CCCTCCATCCCAAAATAAGTTGAG 59.354 45.833 0.00 0.00 0.00 3.02
3714 4196 4.293634 TCCCTCCATCCCAAAATAAGTTGA 59.706 41.667 0.00 0.00 0.00 3.18
3715 4197 4.609301 TCCCTCCATCCCAAAATAAGTTG 58.391 43.478 0.00 0.00 0.00 3.16
3716 4198 4.294970 ACTCCCTCCATCCCAAAATAAGTT 59.705 41.667 0.00 0.00 0.00 2.66
3717 4199 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
3718 4200 4.526438 ACTCCCTCCATCCCAAAATAAG 57.474 45.455 0.00 0.00 0.00 1.73
3719 4201 5.293643 TCTACTCCCTCCATCCCAAAATAA 58.706 41.667 0.00 0.00 0.00 1.40
3720 4202 4.903149 TCTACTCCCTCCATCCCAAAATA 58.097 43.478 0.00 0.00 0.00 1.40
3721 4203 3.747852 TCTACTCCCTCCATCCCAAAAT 58.252 45.455 0.00 0.00 0.00 1.82
3722 4204 3.214694 TCTACTCCCTCCATCCCAAAA 57.785 47.619 0.00 0.00 0.00 2.44
3723 4205 2.961536 TCTACTCCCTCCATCCCAAA 57.038 50.000 0.00 0.00 0.00 3.28
3724 4206 4.569676 TTATCTACTCCCTCCATCCCAA 57.430 45.455 0.00 0.00 0.00 4.12
3725 4207 4.361367 AGATTATCTACTCCCTCCATCCCA 59.639 45.833 0.00 0.00 0.00 4.37
3726 4208 4.714308 CAGATTATCTACTCCCTCCATCCC 59.286 50.000 0.00 0.00 0.00 3.85
3727 4209 5.584913 TCAGATTATCTACTCCCTCCATCC 58.415 45.833 0.00 0.00 0.00 3.51
3728 4210 8.830915 TTATCAGATTATCTACTCCCTCCATC 57.169 38.462 0.00 0.00 0.00 3.51
3729 4211 9.621239 TTTTATCAGATTATCTACTCCCTCCAT 57.379 33.333 0.00 0.00 0.00 3.41
3730 4212 9.621239 ATTTTATCAGATTATCTACTCCCTCCA 57.379 33.333 0.00 0.00 0.00 3.86
3759 4241 5.949735 TCGACATTCTTATTTTTGCTTCCC 58.050 37.500 0.00 0.00 0.00 3.97
3766 4248 6.325919 TGCAGGTTCGACATTCTTATTTTT 57.674 33.333 0.00 0.00 0.00 1.94
3881 4372 1.078143 GCAGGGAATCGCTGGAAGT 60.078 57.895 25.27 0.00 43.28 3.01
3892 4385 2.912956 ACAGAACAGGATTAGCAGGGAA 59.087 45.455 0.00 0.00 0.00 3.97
3986 4479 8.147058 AGATATAGGCAGATTTTACAGACACAG 58.853 37.037 0.00 0.00 0.00 3.66
4026 4519 6.831868 AGTACTTCAAACCACCACAAGTATTT 59.168 34.615 0.00 0.00 33.33 1.40
4031 4524 3.945285 ACAGTACTTCAAACCACCACAAG 59.055 43.478 0.00 0.00 0.00 3.16
4098 4591 6.890558 CAAATTTGGAACCTGCATACAAAAG 58.109 36.000 10.49 0.00 35.06 2.27
4146 4639 9.093970 CCTGAACATAGTTTACGAACAATATCA 57.906 33.333 0.00 0.00 38.26 2.15
4218 4711 2.095466 TCCTCAAAATTTTACCTGCGCG 60.095 45.455 0.00 0.00 0.00 6.86
4270 4763 8.016229 GCAGAAACTTCTAAAACTAAAGGTAGC 58.984 37.037 0.00 0.00 35.34 3.58
4365 4858 5.314718 AGATCATCATTGCCCTGTCATAA 57.685 39.130 0.00 0.00 0.00 1.90
4367 4860 3.878237 AGATCATCATTGCCCTGTCAT 57.122 42.857 0.00 0.00 0.00 3.06
4495 4988 4.646492 GGCACCTGATCATAGAAATGGTTT 59.354 41.667 0.00 0.00 33.61 3.27
4496 4989 4.210331 GGCACCTGATCATAGAAATGGTT 58.790 43.478 0.00 0.00 33.61 3.67
4497 4990 3.202818 TGGCACCTGATCATAGAAATGGT 59.797 43.478 0.00 0.00 33.61 3.55
4499 4992 5.221185 CCTTTGGCACCTGATCATAGAAATG 60.221 44.000 0.00 0.00 0.00 2.32
4500 4993 4.891756 CCTTTGGCACCTGATCATAGAAAT 59.108 41.667 0.00 0.00 0.00 2.17
4501 4994 4.018506 TCCTTTGGCACCTGATCATAGAAA 60.019 41.667 0.00 0.00 0.00 2.52
4519 5032 8.593945 TGATGCTATCAAAAATACCTTCCTTT 57.406 30.769 0.00 0.00 36.11 3.11
4552 5065 6.959639 TGAGGCATATTTAACAAATCCTCC 57.040 37.500 12.04 3.32 38.05 4.30
4594 5107 1.640428 ATCCTGTAACGACACGCATG 58.360 50.000 0.00 0.00 0.00 4.06
4600 5113 5.553123 ACATAACCAAATCCTGTAACGACA 58.447 37.500 0.00 0.00 0.00 4.35
4648 5161 0.105039 CATGAGGGGAGCGGACTAAC 59.895 60.000 0.00 0.00 0.00 2.34
4656 5169 0.394899 CCAGTTTCCATGAGGGGAGC 60.395 60.000 0.00 0.00 38.42 4.70
4658 5171 1.455822 AACCAGTTTCCATGAGGGGA 58.544 50.000 0.00 0.00 37.22 4.81
4662 5175 4.916983 TCAACAAACCAGTTTCCATGAG 57.083 40.909 0.00 0.00 0.00 2.90
4664 5177 5.199024 TGATCAACAAACCAGTTTCCATG 57.801 39.130 0.00 0.00 0.00 3.66
4670 5183 8.735692 AAAAATCAATGATCAACAAACCAGTT 57.264 26.923 0.00 0.00 0.00 3.16
4694 5207 5.244851 TGCACCTACCTGCAATAAAATCAAA 59.755 36.000 0.00 0.00 44.28 2.69
4696 5209 4.339748 TGCACCTACCTGCAATAAAATCA 58.660 39.130 0.00 0.00 44.28 2.57
4745 5258 6.403866 TCACCAGCTAAAAATGAAACATGT 57.596 33.333 0.00 0.00 0.00 3.21
4840 5353 3.499048 GCAATCACATTGAAGCAGACTG 58.501 45.455 0.00 0.00 42.83 3.51
4841 5354 2.490903 GGCAATCACATTGAAGCAGACT 59.509 45.455 0.25 0.00 42.83 3.24
4842 5355 2.490903 AGGCAATCACATTGAAGCAGAC 59.509 45.455 0.25 0.00 42.83 3.51
4847 5360 3.618351 AGGAGAGGCAATCACATTGAAG 58.382 45.455 0.25 0.00 42.83 3.02
4851 5364 1.213926 GGGAGGAGAGGCAATCACATT 59.786 52.381 0.00 0.00 0.00 2.71
4852 5365 0.842635 GGGAGGAGAGGCAATCACAT 59.157 55.000 0.00 0.00 0.00 3.21
4869 5382 7.852971 ACATGAAATAATCAAATGCAAAGGG 57.147 32.000 0.00 0.00 42.54 3.95
4898 5411 8.949177 GTTCTGCCATCCAATTTATTTTGAAAT 58.051 29.630 0.00 0.00 0.00 2.17
4905 5418 5.047377 ACAACGTTCTGCCATCCAATTTATT 60.047 36.000 0.00 0.00 0.00 1.40
4906 5419 4.462483 ACAACGTTCTGCCATCCAATTTAT 59.538 37.500 0.00 0.00 0.00 1.40
4907 5420 3.823873 ACAACGTTCTGCCATCCAATTTA 59.176 39.130 0.00 0.00 0.00 1.40
4908 5421 2.627699 ACAACGTTCTGCCATCCAATTT 59.372 40.909 0.00 0.00 0.00 1.82
4909 5422 2.030007 CACAACGTTCTGCCATCCAATT 60.030 45.455 0.00 0.00 0.00 2.32
4910 5423 1.541147 CACAACGTTCTGCCATCCAAT 59.459 47.619 0.00 0.00 0.00 3.16
4920 5433 0.253610 TGGACAACCCACAACGTTCT 59.746 50.000 0.00 0.00 40.82 3.01
4921 5434 2.783228 TGGACAACCCACAACGTTC 58.217 52.632 0.00 0.00 40.82 3.95
4942 5455 5.970501 TCTATAGAGTAGTGGTGGACTGA 57.029 43.478 0.00 0.00 35.96 3.41
4959 5473 7.504238 GGTCCTTGAGTTCTCTTGAGATCTATA 59.496 40.741 10.21 2.61 0.00 1.31
4960 5474 6.323739 GGTCCTTGAGTTCTCTTGAGATCTAT 59.676 42.308 10.21 0.00 0.00 1.98
4968 5482 4.078639 AGTTGGTCCTTGAGTTCTCTTG 57.921 45.455 1.53 0.00 0.00 3.02
4971 5485 5.470047 TCTAAGTTGGTCCTTGAGTTCTC 57.530 43.478 0.00 0.00 0.00 2.87
4981 5495 1.737793 CGGCATGTTCTAAGTTGGTCC 59.262 52.381 0.00 0.00 0.00 4.46
4983 5497 1.073284 ACCGGCATGTTCTAAGTTGGT 59.927 47.619 0.00 0.00 0.00 3.67
4985 5499 2.159627 GTGACCGGCATGTTCTAAGTTG 59.840 50.000 0.00 0.00 0.00 3.16
4988 5502 2.386661 AGTGACCGGCATGTTCTAAG 57.613 50.000 0.00 0.00 0.00 2.18
4989 5503 2.851263 AAGTGACCGGCATGTTCTAA 57.149 45.000 0.00 0.00 0.00 2.10
4991 5505 1.981256 AAAAGTGACCGGCATGTTCT 58.019 45.000 0.00 0.00 0.00 3.01
4992 5506 2.793278 AAAAAGTGACCGGCATGTTC 57.207 45.000 0.00 0.00 0.00 3.18
5024 5541 8.731275 TTACAAATAGTACTGTGCAATAGCAT 57.269 30.769 5.39 0.00 42.25 3.79
5029 5546 6.094048 CAGCCTTACAAATAGTACTGTGCAAT 59.906 38.462 5.39 0.00 30.91 3.56
5035 5552 8.773404 AAAGTACAGCCTTACAAATAGTACTG 57.227 34.615 5.39 0.00 40.15 2.74
5085 5687 7.085116 AGCTTCGTGTAATACTGCTATCATAC 58.915 38.462 0.00 0.00 0.00 2.39
5090 5692 8.141909 TCATAAAGCTTCGTGTAATACTGCTAT 58.858 33.333 0.00 0.00 31.31 2.97
5101 5703 5.749109 GCAGTATACTCATAAAGCTTCGTGT 59.251 40.000 1.26 1.60 0.00 4.49
5104 5706 8.590470 CATATGCAGTATACTCATAAAGCTTCG 58.410 37.037 19.75 0.00 0.00 3.79
5111 5713 6.661805 TCCGGTCATATGCAGTATACTCATAA 59.338 38.462 19.75 9.18 0.00 1.90
5125 5727 4.023792 CCACAATTCACATCCGGTCATATG 60.024 45.833 0.00 0.00 0.00 1.78
5131 5733 1.628340 TCTCCACAATTCACATCCGGT 59.372 47.619 0.00 0.00 0.00 5.28
5132 5734 2.401583 TCTCCACAATTCACATCCGG 57.598 50.000 0.00 0.00 0.00 5.14
5162 5765 6.531240 ACATTTTTCATTGCCACGTATGAATC 59.469 34.615 11.25 0.00 39.68 2.52
5169 5772 4.612712 CGACTACATTTTTCATTGCCACGT 60.613 41.667 0.00 0.00 0.00 4.49
5170 5773 3.845775 CGACTACATTTTTCATTGCCACG 59.154 43.478 0.00 0.00 0.00 4.94
5171 5774 4.794169 ACGACTACATTTTTCATTGCCAC 58.206 39.130 0.00 0.00 0.00 5.01
5172 5775 4.759693 AGACGACTACATTTTTCATTGCCA 59.240 37.500 0.00 0.00 0.00 4.92
5192 5797 4.096382 CCAATATACCACAGTGGCAAAGAC 59.904 45.833 20.48 0.00 42.67 3.01
5207 5812 9.587772 AATATCGAGACAACTATGCCAATATAC 57.412 33.333 0.00 0.00 0.00 1.47
5231 5838 7.771826 CCCCAATTCAGAAATTAGCAAATCAAT 59.228 33.333 0.00 0.00 33.27 2.57
5232 5839 7.104939 CCCCAATTCAGAAATTAGCAAATCAA 58.895 34.615 0.00 0.00 33.27 2.57
5233 5840 6.642430 CCCCAATTCAGAAATTAGCAAATCA 58.358 36.000 0.00 0.00 33.27 2.57
5235 5842 5.045724 TGCCCCAATTCAGAAATTAGCAAAT 60.046 36.000 0.00 0.00 34.38 2.32
5236 5843 4.285517 TGCCCCAATTCAGAAATTAGCAAA 59.714 37.500 0.00 0.00 34.38 3.68
5237 5844 3.837146 TGCCCCAATTCAGAAATTAGCAA 59.163 39.130 0.00 0.00 34.38 3.91
5239 5846 3.195396 TGTGCCCCAATTCAGAAATTAGC 59.805 43.478 0.00 0.00 33.27 3.09
5240 5847 5.404466 TTGTGCCCCAATTCAGAAATTAG 57.596 39.130 0.00 0.00 33.27 1.73
5249 6121 4.646492 ACTCAATAGATTGTGCCCCAATTC 59.354 41.667 2.32 0.00 43.87 2.17
5257 6129 7.934120 ACCCTTAATAGACTCAATAGATTGTGC 59.066 37.037 2.32 0.00 38.84 4.57
5312 6189 3.006859 CGTCAGCCATACCCATCTTCATA 59.993 47.826 0.00 0.00 0.00 2.15
5339 6216 2.492088 TCCACTACTCACAAGATCCACG 59.508 50.000 0.00 0.00 0.00 4.94
5396 6273 3.007831 GGCTTTCCAAAATGATTCCACCA 59.992 43.478 0.00 0.00 0.00 4.17
5403 6280 4.677182 AGTACCTGGCTTTCCAAAATGAT 58.323 39.130 0.00 0.00 42.91 2.45
5405 6282 4.082125 AGAGTACCTGGCTTTCCAAAATG 58.918 43.478 0.00 0.00 42.91 2.32
5522 6404 3.830744 ACAAGTGTTGCCTGTGTAGTA 57.169 42.857 0.00 0.00 0.00 1.82
5528 6410 1.949525 CTTGCTACAAGTGTTGCCTGT 59.050 47.619 13.92 0.00 44.16 4.00
5567 6449 2.433868 TCTCTAACACACCTTCACGC 57.566 50.000 0.00 0.00 0.00 5.34
5597 6479 5.356470 GTGAGCCTCTAATCTTTCAAGCATT 59.644 40.000 0.00 0.00 0.00 3.56
5664 6547 6.597672 TCAACTGGGTGTAATAATGTGACATC 59.402 38.462 0.00 0.00 0.00 3.06
5821 6706 9.726438 AATGTTCTTTGCTACTGAAGTACTTAT 57.274 29.630 8.42 0.00 0.00 1.73
5822 6707 9.555727 AAATGTTCTTTGCTACTGAAGTACTTA 57.444 29.630 8.42 0.00 0.00 2.24
5823 6708 8.451908 AAATGTTCTTTGCTACTGAAGTACTT 57.548 30.769 8.13 8.13 0.00 2.24
5824 6709 7.934120 AGAAATGTTCTTTGCTACTGAAGTACT 59.066 33.333 0.00 0.00 36.36 2.73
5825 6710 8.089115 AGAAATGTTCTTTGCTACTGAAGTAC 57.911 34.615 0.00 0.00 36.36 2.73
5826 6711 9.944376 ATAGAAATGTTCTTTGCTACTGAAGTA 57.056 29.630 0.00 0.00 41.14 2.24
5831 6716 9.132521 CCAAAATAGAAATGTTCTTTGCTACTG 57.867 33.333 0.00 0.00 41.14 2.74
5841 6726 9.140286 GGCTAGTTTTCCAAAATAGAAATGTTC 57.860 33.333 7.67 0.00 33.45 3.18
5845 6730 9.034800 TCATGGCTAGTTTTCCAAAATAGAAAT 57.965 29.630 7.67 0.00 35.75 2.17
5848 6733 7.093945 GGTTCATGGCTAGTTTTCCAAAATAGA 60.094 37.037 7.67 0.00 35.75 1.98
5849 6734 7.035612 GGTTCATGGCTAGTTTTCCAAAATAG 58.964 38.462 0.00 0.40 35.75 1.73
5851 6736 5.279960 GGGTTCATGGCTAGTTTTCCAAAAT 60.280 40.000 0.00 0.00 35.75 1.82
5946 6921 6.763135 CAGTTATGGATACTGCACTGTATGTT 59.237 38.462 3.51 0.00 36.88 2.71
5947 6922 6.098266 TCAGTTATGGATACTGCACTGTATGT 59.902 38.462 3.51 0.00 42.12 2.29
5998 7047 2.294791 GACGCAGATAGAGGTGCTACAT 59.705 50.000 0.00 0.00 37.55 2.29
6009 7058 6.828502 TGCAAACTAATAAGACGCAGATAG 57.171 37.500 0.00 0.00 0.00 2.08
6026 7078 4.293415 GCACAGGCTATAATCATGCAAAC 58.707 43.478 0.00 0.00 36.96 2.93
6034 7086 1.070134 TCGTGGGCACAGGCTATAATC 59.930 52.381 3.11 0.00 40.87 1.75
6053 7105 7.697710 TGATCAAACATCTGCATCGTTTATTTC 59.302 33.333 0.00 6.47 31.85 2.17
6060 7112 3.337358 TGTGATCAAACATCTGCATCGT 58.663 40.909 0.00 0.00 0.00 3.73
6077 7130 6.462347 GCTTCAAAGGGGTAGAAATTTTGTGA 60.462 38.462 0.00 0.00 32.22 3.58
6080 7133 4.923281 CGCTTCAAAGGGGTAGAAATTTTG 59.077 41.667 0.00 0.00 35.54 2.44
6082 7135 4.403734 TCGCTTCAAAGGGGTAGAAATTT 58.596 39.130 6.93 0.00 39.25 1.82
6133 7186 5.825593 TGAGAGATATTATGGACCCCAAC 57.174 43.478 0.00 0.00 36.95 3.77
6193 7247 2.302445 CAATTGGAATTTGGCCCAGTCA 59.698 45.455 0.00 0.00 33.43 3.41
6230 7286 3.263681 ACTGAAGGGACCTAAAAGGCTAC 59.736 47.826 0.00 0.00 39.63 3.58
6234 7290 6.304624 AGTTTAACTGAAGGGACCTAAAAGG 58.695 40.000 0.00 0.00 42.49 3.11
6235 7291 8.913487 TTAGTTTAACTGAAGGGACCTAAAAG 57.087 34.615 8.00 0.00 0.00 2.27
6240 7296 7.556635 GCATTATTAGTTTAACTGAAGGGACCT 59.443 37.037 8.00 0.00 0.00 3.85
6241 7297 7.338449 TGCATTATTAGTTTAACTGAAGGGACC 59.662 37.037 8.00 0.00 0.00 4.46
6242 7298 8.276252 TGCATTATTAGTTTAACTGAAGGGAC 57.724 34.615 8.00 0.00 0.00 4.46
6243 7299 9.474313 AATGCATTATTAGTTTAACTGAAGGGA 57.526 29.630 11.02 3.18 0.00 4.20
6270 7326 7.483580 AGAGCAAACCTATTAGTGAGTTAGT 57.516 36.000 0.00 0.00 0.00 2.24
6277 7333 6.094603 AGCAATCAAGAGCAAACCTATTAGTG 59.905 38.462 0.00 0.00 0.00 2.74
6357 7413 6.934056 TGGACCAAATGGAATCATAAGTTTG 58.066 36.000 6.42 0.00 38.94 2.93
6359 7415 7.128077 AGATGGACCAAATGGAATCATAAGTT 58.872 34.615 6.42 0.00 38.94 2.66
6370 7426 6.071447 TGTTCACATAAAGATGGACCAAATGG 60.071 38.462 0.00 0.00 37.39 3.16
6377 7433 3.378427 GCCCTGTTCACATAAAGATGGAC 59.622 47.826 0.00 0.00 37.39 4.02
6386 7442 1.072266 AGTTGGGCCCTGTTCACATA 58.928 50.000 25.70 0.00 0.00 2.29
6438 7494 1.935933 CATAGTAGTCCACGGCAACC 58.064 55.000 0.00 0.00 0.00 3.77
6444 7500 7.652105 ACAACATTAATAGCATAGTAGTCCACG 59.348 37.037 0.00 0.00 0.00 4.94
6533 7589 5.120674 GGCAAATGTTTCCATAGAAAAGCAC 59.879 40.000 0.00 0.00 43.48 4.40
6599 7655 6.237808 CCTCAAACACGGCATTAAATTATTGC 60.238 38.462 10.43 10.43 35.06 3.56
6800 7889 0.401395 TCTGGTTCCTGGTCCTGGTT 60.401 55.000 14.11 0.00 0.00 3.67
6828 7917 2.222027 GATTTATTCTCCCAGCACCGG 58.778 52.381 0.00 0.00 0.00 5.28
6935 8024 9.480053 CCAGTTTGATTTGTCAAATTAGAACAT 57.520 29.630 21.49 11.92 41.01 2.71
6983 8072 7.281774 CCTCATGTACTCGGTTTAGTTCTACTA 59.718 40.741 0.00 0.00 0.00 1.82
6984 8073 6.095160 CCTCATGTACTCGGTTTAGTTCTACT 59.905 42.308 0.00 0.00 0.00 2.57
6985 8074 6.127786 ACCTCATGTACTCGGTTTAGTTCTAC 60.128 42.308 0.00 0.00 0.00 2.59
6986 8075 5.948162 ACCTCATGTACTCGGTTTAGTTCTA 59.052 40.000 0.00 0.00 0.00 2.10
6988 8077 4.863131 CACCTCATGTACTCGGTTTAGTTC 59.137 45.833 0.00 0.00 0.00 3.01
6989 8078 4.817517 CACCTCATGTACTCGGTTTAGTT 58.182 43.478 0.00 0.00 0.00 2.24
6990 8079 3.368116 GCACCTCATGTACTCGGTTTAGT 60.368 47.826 0.00 0.00 0.00 2.24
6991 8080 3.187700 GCACCTCATGTACTCGGTTTAG 58.812 50.000 0.00 0.00 0.00 1.85
6992 8081 2.563620 TGCACCTCATGTACTCGGTTTA 59.436 45.455 0.00 0.00 0.00 2.01
7147 8240 0.181350 ACTTCATCCATCCGGCCTTC 59.819 55.000 0.00 0.00 0.00 3.46
7204 8297 2.627699 CCTGCCTTTTAGCTTTTGTGGA 59.372 45.455 0.00 0.00 0.00 4.02
7244 8337 1.419762 ACCATACAACACTGCAGGTCA 59.580 47.619 19.93 3.17 0.00 4.02
7348 8442 1.821216 TTCCGGACATCTTTCCTTGC 58.179 50.000 1.83 0.00 32.88 4.01
7356 8450 8.981659 TCACATATATTATCATTCCGGACATCT 58.018 33.333 1.83 0.00 0.00 2.90
7378 8475 2.500098 GTGCTACCCCAACTCTATCACA 59.500 50.000 0.00 0.00 0.00 3.58
7380 8477 2.116238 GGTGCTACCCCAACTCTATCA 58.884 52.381 0.00 0.00 30.04 2.15
7938 9882 4.262121 CCAATCTGCAATTCCAAGTTCACA 60.262 41.667 0.00 0.00 0.00 3.58
7971 9916 1.521423 GTCAGTTTCGACACCAAGACG 59.479 52.381 0.00 0.00 35.88 4.18
8028 9973 2.125350 CCCAGCTCCGACAGAAGC 60.125 66.667 0.00 0.00 0.00 3.86
8054 9999 3.435186 GCCGACCTTGCAGGAAGC 61.435 66.667 8.91 5.13 37.67 3.86
8058 10003 3.136123 CATGGCCGACCTTGCAGG 61.136 66.667 0.00 1.16 42.49 4.85
8077 10022 2.510382 ACGGTCCATTCTAGAGGAGAGA 59.490 50.000 0.98 0.00 34.93 3.10
8078 10023 2.882137 GACGGTCCATTCTAGAGGAGAG 59.118 54.545 0.98 2.05 34.93 3.20
8079 10024 2.510382 AGACGGTCCATTCTAGAGGAGA 59.490 50.000 4.14 0.00 33.85 3.71
8103 10048 4.270178 GCATAAGTTCAGATGCTCACAC 57.730 45.455 2.44 0.00 44.15 3.82
8191 10140 2.044650 CAGGCAGTCCACATGGGG 60.045 66.667 8.05 8.05 37.22 4.96
8202 10151 2.906691 ATCGAAATCTCCTCAGGCAG 57.093 50.000 0.00 0.00 0.00 4.85
8294 10243 2.305927 CCAACTCTATCAACTGGTGGGT 59.694 50.000 0.00 0.00 0.00 4.51
8295 10244 2.356125 CCCAACTCTATCAACTGGTGGG 60.356 54.545 0.22 0.22 0.00 4.61
8375 10324 1.654220 CCAATTATTCAGGGCCGCG 59.346 57.895 0.00 0.00 0.00 6.46
8412 10361 7.401493 ACCAAACCACAATGGGATTCATTATTA 59.599 33.333 0.00 0.00 43.70 0.98
8442 10391 0.739813 AATAGACTCGCCACGCAACC 60.740 55.000 0.00 0.00 0.00 3.77
8445 10394 0.179137 CTGAATAGACTCGCCACGCA 60.179 55.000 0.00 0.00 0.00 5.24
8463 10412 3.118112 ACGAGCATTTCAGATGGGAATCT 60.118 43.478 0.00 0.00 0.00 2.40
8490 10440 0.321564 TGAATGGGGTGAGAACAGCG 60.322 55.000 0.00 0.00 44.31 5.18
8501 10451 1.672881 GACGAGCAATTCTGAATGGGG 59.327 52.381 3.22 0.00 0.00 4.96
8509 10459 2.768253 TGGATGTGACGAGCAATTCT 57.232 45.000 0.00 0.00 0.00 2.40
8518 10468 2.265683 CAGACAGACATGGATGTGACG 58.734 52.381 9.52 0.00 41.95 4.35
8534 10484 8.677148 AAGAGATATACAGAGAAGAGACAGAC 57.323 38.462 0.00 0.00 0.00 3.51
8545 10495 3.570125 TGGCACGGAAGAGATATACAGAG 59.430 47.826 0.00 0.00 0.00 3.35
8562 10512 1.093159 CCATTTCTCAGAGCTGGCAC 58.907 55.000 0.00 0.00 0.00 5.01
8565 10515 2.005451 CGAACCATTTCTCAGAGCTGG 58.995 52.381 0.00 10.44 0.00 4.85
8568 10518 1.656095 CGACGAACCATTTCTCAGAGC 59.344 52.381 0.00 0.00 0.00 4.09
8571 10521 2.672714 TCACGACGAACCATTTCTCAG 58.327 47.619 0.00 0.00 0.00 3.35
8587 10537 4.392921 ACTATTCTCCAACAGGATCACG 57.607 45.455 0.00 0.00 0.00 4.35
8588 10538 5.814705 CAGAACTATTCTCCAACAGGATCAC 59.185 44.000 0.00 0.00 38.11 3.06
8687 10641 3.825585 TGACAAAAATAGGAGCATGCACA 59.174 39.130 21.98 0.00 0.00 4.57
8691 10645 9.079833 CAGTAATTTGACAAAAATAGGAGCATG 57.920 33.333 4.41 0.00 0.00 4.06
8692 10646 7.761249 GCAGTAATTTGACAAAAATAGGAGCAT 59.239 33.333 4.41 0.00 0.00 3.79
8698 10652 7.378181 AGTGGGCAGTAATTTGACAAAAATAG 58.622 34.615 4.41 0.00 0.00 1.73
8746 10700 1.346395 AGCAAACCGTGATCTACACCA 59.654 47.619 0.00 0.00 45.73 4.17
8747 10701 2.094762 AGCAAACCGTGATCTACACC 57.905 50.000 0.00 0.00 45.73 4.16
8748 10702 3.064207 TCAAGCAAACCGTGATCTACAC 58.936 45.455 0.00 0.00 45.11 2.90
8765 10719 3.155998 CGAAATAGCAACGCTGTTCAAG 58.844 45.455 0.00 0.00 38.96 3.02
8844 10810 5.585047 CAGGCTAGTACCCATTGTTAAACTC 59.415 44.000 0.00 0.00 0.00 3.01
8865 10831 5.906073 ACTCATTTTGTTTTGACCTTCAGG 58.094 37.500 0.00 0.00 42.17 3.86
8866 10832 8.971321 CATTACTCATTTTGTTTTGACCTTCAG 58.029 33.333 0.00 0.00 0.00 3.02
8867 10833 8.474025 ACATTACTCATTTTGTTTTGACCTTCA 58.526 29.630 0.00 0.00 0.00 3.02
8896 10862 8.463607 TGAAACGGAGGAAATAAATTTATGTCC 58.536 33.333 29.41 29.41 44.56 4.02
8897 10863 9.285770 GTGAAACGGAGGAAATAAATTTATGTC 57.714 33.333 17.04 17.04 0.00 3.06
8898 10864 8.798402 TGTGAAACGGAGGAAATAAATTTATGT 58.202 29.630 11.42 6.01 42.39 2.29
8899 10865 9.632807 TTGTGAAACGGAGGAAATAAATTTATG 57.367 29.630 11.42 0.37 42.39 1.90
8911 10877 4.312443 GTCTTACATTGTGAAACGGAGGA 58.688 43.478 0.00 0.00 42.39 3.71
8919 10885 4.201960 TGCAAAAGCGTCTTACATTGTGAA 60.202 37.500 0.00 0.00 0.00 3.18
8920 10886 3.313803 TGCAAAAGCGTCTTACATTGTGA 59.686 39.130 0.00 0.00 0.00 3.58
8923 10889 3.120121 GCTTGCAAAAGCGTCTTACATTG 59.880 43.478 0.00 0.00 35.93 2.82
8965 10931 9.601810 AATACCTCTGTCCTACAATATATGACA 57.398 33.333 3.59 3.59 34.95 3.58
8982 10948 4.646945 TGCTCTTCCAGTCTAATACCTCTG 59.353 45.833 0.00 0.00 0.00 3.35
9016 10982 0.033504 GCAACCGAACTCCAGAGACA 59.966 55.000 0.70 0.00 0.00 3.41
9022 10988 1.021202 CTTTGTGCAACCGAACTCCA 58.979 50.000 0.00 0.00 34.36 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.