Multiple sequence alignment - TraesCS4B01G329700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G329700 chr4B 100.000 3650 0 0 1 3650 620947985 620944336 0.000000e+00 6741.0
1 TraesCS4B01G329700 chr4B 76.891 1454 290 38 1198 2622 621279747 621281183 0.000000e+00 782.0
2 TraesCS4B01G329700 chr4B 95.455 176 8 0 2726 2901 111217887 111218062 7.720000e-72 281.0
3 TraesCS4B01G329700 chr4B 94.915 59 1 2 2894 2952 620411772 620411716 1.400000e-14 91.6
4 TraesCS4B01G329700 chr4B 94.915 59 1 2 2894 2952 620564953 620564897 1.400000e-14 91.6
5 TraesCS4B01G329700 chr4B 93.220 59 2 2 2894 2952 620495210 620495154 6.490000e-13 86.1
6 TraesCS4B01G329700 chr4B 93.220 59 2 2 2894 2952 620527777 620527721 6.490000e-13 86.1
7 TraesCS4B01G329700 chr4B 91.525 59 3 2 2894 2952 620574922 620574866 3.020000e-11 80.5
8 TraesCS4B01G329700 chr4D 95.922 2011 69 4 721 2725 486431959 486433962 0.000000e+00 3247.0
9 TraesCS4B01G329700 chr4D 77.124 1495 282 46 1198 2653 486623210 486621737 0.000000e+00 811.0
10 TraesCS4B01G329700 chr4D 95.455 176 8 0 2726 2901 329878605 329878780 7.720000e-72 281.0
11 TraesCS4B01G329700 chr4D 90.000 200 14 2 372 566 486431786 486431984 1.680000e-63 254.0
12 TraesCS4B01G329700 chr4D 94.915 59 1 2 2895 2952 486433949 486434006 1.400000e-14 91.6
13 TraesCS4B01G329700 chr5A 94.826 2010 77 7 721 2725 666752405 666750418 0.000000e+00 3110.0
14 TraesCS4B01G329700 chr5A 77.497 1462 281 38 1198 2629 666874101 666872658 0.000000e+00 833.0
15 TraesCS4B01G329700 chr5A 77.182 1455 284 38 1198 2622 667067580 667069016 0.000000e+00 804.0
16 TraesCS4B01G329700 chr5A 92.025 163 11 1 406 566 666752542 666752380 1.020000e-55 228.0
17 TraesCS4B01G329700 chr5A 91.935 62 0 3 2895 2952 666750431 666750371 8.400000e-12 82.4
18 TraesCS4B01G329700 chr6B 78.043 1175 219 25 1472 2622 56050186 56049027 0.000000e+00 704.0
19 TraesCS4B01G329700 chr6B 95.480 177 8 0 2726 2902 12536769 12536593 2.150000e-72 283.0
20 TraesCS4B01G329700 chr6B 94.366 71 4 0 598 668 703423098 703423168 3.850000e-20 110.0
21 TraesCS4B01G329700 chr6B 94.203 69 4 0 598 666 703495726 703495794 4.980000e-19 106.0
22 TraesCS4B01G329700 chr6B 95.082 61 3 0 660 720 703495833 703495893 3.000000e-16 97.1
23 TraesCS4B01G329700 chr6B 97.826 46 1 0 675 720 703423427 703423472 3.020000e-11 80.5
24 TraesCS4B01G329700 chr6A 77.447 1175 226 24 1472 2622 31369090 31367931 0.000000e+00 665.0
25 TraesCS4B01G329700 chr5B 85.229 677 64 13 2952 3604 636442843 636442179 0.000000e+00 664.0
26 TraesCS4B01G329700 chr5B 96.000 175 7 0 2726 2900 363665473 363665299 5.970000e-73 285.0
27 TraesCS4B01G329700 chr5B 94.972 179 9 0 2722 2900 589201029 589201207 7.720000e-72 281.0
28 TraesCS4B01G329700 chr5B 88.835 206 15 5 164 368 372162220 372162022 2.810000e-61 246.0
29 TraesCS4B01G329700 chrUn 77.381 1176 225 27 1472 2622 103934320 103933161 0.000000e+00 660.0
30 TraesCS4B01G329700 chr7B 90.036 281 22 5 3326 3604 130070719 130070443 3.470000e-95 359.0
31 TraesCS4B01G329700 chr7B 94.972 179 9 0 2726 2904 662001627 662001449 7.720000e-72 281.0
32 TraesCS4B01G329700 chr3B 94.180 189 11 0 2717 2905 15974173 15973985 4.610000e-74 289.0
33 TraesCS4B01G329700 chr3B 90.164 61 6 0 660 720 716243708 716243648 3.020000e-11 80.5
34 TraesCS4B01G329700 chr3B 81.818 88 10 5 736 821 676970806 676970889 6.540000e-08 69.4
35 TraesCS4B01G329700 chr4A 95.506 178 8 0 2721 2898 662620992 662621169 5.970000e-73 285.0
36 TraesCS4B01G329700 chr4A 85.778 225 22 6 148 371 662202898 662202683 2.830000e-56 230.0
37 TraesCS4B01G329700 chr4A 92.188 64 5 0 660 723 738030538 738030475 1.400000e-14 91.6
38 TraesCS4B01G329700 chr2B 96.000 175 7 0 2725 2899 89545340 89545514 5.970000e-73 285.0
39 TraesCS4B01G329700 chr2B 95.000 40 1 1 660 699 40508093 40508055 1.090000e-05 62.1
40 TraesCS4B01G329700 chr2B 100.000 28 0 0 598 625 40508043 40508070 7.000000e-03 52.8
41 TraesCS4B01G329700 chr5D 90.995 211 10 6 164 372 501436591 501436388 3.590000e-70 276.0
42 TraesCS4B01G329700 chr3D 89.474 209 16 2 164 372 519879931 519880133 3.620000e-65 259.0
43 TraesCS4B01G329700 chr3D 87.192 203 19 5 164 365 83941059 83940863 1.320000e-54 224.0
44 TraesCS4B01G329700 chr2D 89.552 201 14 5 164 364 484475117 484475310 7.830000e-62 248.0
45 TraesCS4B01G329700 chr6D 88.038 209 18 4 164 371 457095770 457095568 1.310000e-59 241.0
46 TraesCS4B01G329700 chr6D 87.143 210 20 5 164 372 428884970 428885173 7.880000e-57 231.0
47 TraesCS4B01G329700 chr7A 86.667 210 21 4 164 372 10021029 10020826 3.670000e-55 226.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G329700 chr4B 620944336 620947985 3649 True 6741.000000 6741 100.000000 1 3650 1 chr4B.!!$R6 3649
1 TraesCS4B01G329700 chr4B 621279747 621281183 1436 False 782.000000 782 76.891000 1198 2622 1 chr4B.!!$F2 1424
2 TraesCS4B01G329700 chr4D 486431786 486434006 2220 False 1197.533333 3247 93.612333 372 2952 3 chr4D.!!$F2 2580
3 TraesCS4B01G329700 chr4D 486621737 486623210 1473 True 811.000000 811 77.124000 1198 2653 1 chr4D.!!$R1 1455
4 TraesCS4B01G329700 chr5A 666750371 666752542 2171 True 1140.133333 3110 92.928667 406 2952 3 chr5A.!!$R2 2546
5 TraesCS4B01G329700 chr5A 666872658 666874101 1443 True 833.000000 833 77.497000 1198 2629 1 chr5A.!!$R1 1431
6 TraesCS4B01G329700 chr5A 667067580 667069016 1436 False 804.000000 804 77.182000 1198 2622 1 chr5A.!!$F1 1424
7 TraesCS4B01G329700 chr6B 56049027 56050186 1159 True 704.000000 704 78.043000 1472 2622 1 chr6B.!!$R2 1150
8 TraesCS4B01G329700 chr6A 31367931 31369090 1159 True 665.000000 665 77.447000 1472 2622 1 chr6A.!!$R1 1150
9 TraesCS4B01G329700 chr5B 636442179 636442843 664 True 664.000000 664 85.229000 2952 3604 1 chr5B.!!$R3 652
10 TraesCS4B01G329700 chrUn 103933161 103934320 1159 True 660.000000 660 77.381000 1472 2622 1 chrUn.!!$R1 1150

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
152 153 0.033504 GGAGGCGAGTCAACAACAGA 59.966 55.0 0.0 0.0 0.00 3.41 F
363 364 0.033894 ACACCCAGGAACCAAACGTT 60.034 50.0 0.0 0.0 37.41 3.99 F
1367 1378 0.095417 GTGGAATCGCAGTTCTTCGC 59.905 55.0 0.0 0.0 0.00 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1101 1112 0.243095 AGTACTCCTTGTCGCCGAAC 59.757 55.000 0.0 0.0 0.0 3.95 R
2310 2357 1.205655 CCGCCCGATATGATGATGTCT 59.794 52.381 0.0 0.0 0.0 3.41 R
2800 2859 0.104855 AGATGTGTGTGTGCTGACGT 59.895 50.000 0.0 0.0 0.0 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.124351 CGCGTCGGGTGCCTCTTA 62.124 66.667 0.00 0.00 0.00 2.10
22 23 2.499685 GCGTCGGGTGCCTCTTAT 59.500 61.111 0.00 0.00 0.00 1.73
23 24 1.153429 GCGTCGGGTGCCTCTTATT 60.153 57.895 0.00 0.00 0.00 1.40
24 25 0.103572 GCGTCGGGTGCCTCTTATTA 59.896 55.000 0.00 0.00 0.00 0.98
25 26 1.270147 GCGTCGGGTGCCTCTTATTAT 60.270 52.381 0.00 0.00 0.00 1.28
26 27 2.805657 GCGTCGGGTGCCTCTTATTATT 60.806 50.000 0.00 0.00 0.00 1.40
27 28 2.800544 CGTCGGGTGCCTCTTATTATTG 59.199 50.000 0.00 0.00 0.00 1.90
28 29 2.548480 GTCGGGTGCCTCTTATTATTGC 59.452 50.000 0.00 0.00 0.00 3.56
29 30 2.438021 TCGGGTGCCTCTTATTATTGCT 59.562 45.455 0.00 0.00 0.00 3.91
30 31 3.118038 TCGGGTGCCTCTTATTATTGCTT 60.118 43.478 0.00 0.00 0.00 3.91
31 32 3.251004 CGGGTGCCTCTTATTATTGCTTC 59.749 47.826 0.00 0.00 0.00 3.86
32 33 3.570125 GGGTGCCTCTTATTATTGCTTCC 59.430 47.826 0.00 0.00 0.00 3.46
33 34 3.251004 GGTGCCTCTTATTATTGCTTCCG 59.749 47.826 0.00 0.00 0.00 4.30
34 35 3.251004 GTGCCTCTTATTATTGCTTCCGG 59.749 47.826 0.00 0.00 0.00 5.14
35 36 2.226674 GCCTCTTATTATTGCTTCCGGC 59.773 50.000 0.00 0.00 42.22 6.13
36 37 2.814336 CCTCTTATTATTGCTTCCGGCC 59.186 50.000 0.00 0.00 40.92 6.13
37 38 3.496870 CCTCTTATTATTGCTTCCGGCCT 60.497 47.826 0.00 0.00 40.92 5.19
38 39 4.262894 CCTCTTATTATTGCTTCCGGCCTA 60.263 45.833 0.00 0.00 40.92 3.93
39 40 4.894784 TCTTATTATTGCTTCCGGCCTAG 58.105 43.478 0.00 0.00 40.92 3.02
40 41 2.568623 ATTATTGCTTCCGGCCTAGG 57.431 50.000 3.67 3.67 40.92 3.02
41 42 1.209621 TTATTGCTTCCGGCCTAGGT 58.790 50.000 11.31 0.00 40.92 3.08
42 43 2.091098 TATTGCTTCCGGCCTAGGTA 57.909 50.000 11.31 0.00 40.92 3.08
43 44 1.435256 ATTGCTTCCGGCCTAGGTAT 58.565 50.000 11.31 0.00 40.92 2.73
44 45 2.091098 TTGCTTCCGGCCTAGGTATA 57.909 50.000 11.31 0.00 40.92 1.47
45 46 2.320681 TGCTTCCGGCCTAGGTATAT 57.679 50.000 11.31 0.00 40.92 0.86
46 47 2.616524 TGCTTCCGGCCTAGGTATATT 58.383 47.619 11.31 0.00 40.92 1.28
47 48 2.976882 TGCTTCCGGCCTAGGTATATTT 59.023 45.455 11.31 0.00 40.92 1.40
48 49 4.161876 TGCTTCCGGCCTAGGTATATTTA 58.838 43.478 11.31 0.00 40.92 1.40
49 50 4.594062 TGCTTCCGGCCTAGGTATATTTAA 59.406 41.667 11.31 0.00 40.92 1.52
50 51 5.249852 TGCTTCCGGCCTAGGTATATTTAAT 59.750 40.000 11.31 0.00 40.92 1.40
51 52 6.178324 GCTTCCGGCCTAGGTATATTTAATT 58.822 40.000 11.31 0.00 34.27 1.40
52 53 7.038160 TGCTTCCGGCCTAGGTATATTTAATTA 60.038 37.037 11.31 0.00 40.92 1.40
53 54 7.991460 GCTTCCGGCCTAGGTATATTTAATTAT 59.009 37.037 11.31 0.00 34.27 1.28
54 55 9.901172 CTTCCGGCCTAGGTATATTTAATTATT 57.099 33.333 11.31 0.00 0.00 1.40
56 57 9.675464 TCCGGCCTAGGTATATTTAATTATTTG 57.325 33.333 11.31 0.00 0.00 2.32
57 58 8.403236 CCGGCCTAGGTATATTTAATTATTTGC 58.597 37.037 11.31 0.00 0.00 3.68
58 59 8.403236 CGGCCTAGGTATATTTAATTATTTGCC 58.597 37.037 11.31 0.00 0.00 4.52
59 60 8.692710 GGCCTAGGTATATTTAATTATTTGCCC 58.307 37.037 11.31 0.00 0.00 5.36
60 61 9.250246 GCCTAGGTATATTTAATTATTTGCCCA 57.750 33.333 11.31 0.00 0.00 5.36
71 72 9.535878 TTTAATTATTTGCCCATTTCGTTATCC 57.464 29.630 0.00 0.00 0.00 2.59
72 73 6.723298 ATTATTTGCCCATTTCGTTATCCA 57.277 33.333 0.00 0.00 0.00 3.41
73 74 3.859411 TTTGCCCATTTCGTTATCCAC 57.141 42.857 0.00 0.00 0.00 4.02
74 75 1.757682 TGCCCATTTCGTTATCCACC 58.242 50.000 0.00 0.00 0.00 4.61
75 76 1.029681 GCCCATTTCGTTATCCACCC 58.970 55.000 0.00 0.00 0.00 4.61
76 77 1.409661 GCCCATTTCGTTATCCACCCT 60.410 52.381 0.00 0.00 0.00 4.34
77 78 2.572290 CCCATTTCGTTATCCACCCTC 58.428 52.381 0.00 0.00 0.00 4.30
78 79 2.172717 CCCATTTCGTTATCCACCCTCT 59.827 50.000 0.00 0.00 0.00 3.69
79 80 3.467803 CCATTTCGTTATCCACCCTCTC 58.532 50.000 0.00 0.00 0.00 3.20
80 81 3.118408 CCATTTCGTTATCCACCCTCTCA 60.118 47.826 0.00 0.00 0.00 3.27
81 82 3.604875 TTTCGTTATCCACCCTCTCAC 57.395 47.619 0.00 0.00 0.00 3.51
82 83 1.481871 TCGTTATCCACCCTCTCACC 58.518 55.000 0.00 0.00 0.00 4.02
83 84 0.464452 CGTTATCCACCCTCTCACCC 59.536 60.000 0.00 0.00 0.00 4.61
84 85 1.580059 GTTATCCACCCTCTCACCCA 58.420 55.000 0.00 0.00 0.00 4.51
85 86 1.913419 GTTATCCACCCTCTCACCCAA 59.087 52.381 0.00 0.00 0.00 4.12
86 87 2.307686 GTTATCCACCCTCTCACCCAAA 59.692 50.000 0.00 0.00 0.00 3.28
87 88 1.686236 ATCCACCCTCTCACCCAAAT 58.314 50.000 0.00 0.00 0.00 2.32
88 89 0.991920 TCCACCCTCTCACCCAAATC 59.008 55.000 0.00 0.00 0.00 2.17
89 90 0.995024 CCACCCTCTCACCCAAATCT 59.005 55.000 0.00 0.00 0.00 2.40
90 91 2.196595 CCACCCTCTCACCCAAATCTA 58.803 52.381 0.00 0.00 0.00 1.98
91 92 2.171448 CCACCCTCTCACCCAAATCTAG 59.829 54.545 0.00 0.00 0.00 2.43
92 93 3.107601 CACCCTCTCACCCAAATCTAGA 58.892 50.000 0.00 0.00 0.00 2.43
93 94 3.133721 CACCCTCTCACCCAAATCTAGAG 59.866 52.174 0.00 0.00 34.71 2.43
94 95 3.012959 ACCCTCTCACCCAAATCTAGAGA 59.987 47.826 0.00 0.00 36.60 3.10
98 99 5.458451 TCTCACCCAAATCTAGAGAGAGA 57.542 43.478 0.00 0.55 34.35 3.10
99 100 5.445069 TCTCACCCAAATCTAGAGAGAGAG 58.555 45.833 0.00 0.00 34.35 3.20
100 101 5.192722 TCTCACCCAAATCTAGAGAGAGAGA 59.807 44.000 0.00 2.25 34.35 3.10
101 102 5.445069 TCACCCAAATCTAGAGAGAGAGAG 58.555 45.833 0.00 0.00 34.35 3.20
102 103 5.192722 TCACCCAAATCTAGAGAGAGAGAGA 59.807 44.000 0.00 0.00 34.35 3.10
103 104 5.532406 CACCCAAATCTAGAGAGAGAGAGAG 59.468 48.000 0.00 0.00 34.35 3.20
104 105 5.072741 CCCAAATCTAGAGAGAGAGAGAGG 58.927 50.000 0.00 0.00 34.35 3.69
105 106 5.072741 CCAAATCTAGAGAGAGAGAGAGGG 58.927 50.000 0.00 0.00 34.35 4.30
106 107 5.399038 CCAAATCTAGAGAGAGAGAGAGGGT 60.399 48.000 0.00 0.00 34.35 4.34
107 108 5.568620 AATCTAGAGAGAGAGAGAGGGTC 57.431 47.826 0.00 0.00 34.35 4.46
108 109 4.002256 TCTAGAGAGAGAGAGAGGGTCA 57.998 50.000 0.00 0.00 0.00 4.02
109 110 3.709653 TCTAGAGAGAGAGAGAGGGTCAC 59.290 52.174 0.00 0.00 0.00 3.67
110 111 1.564348 AGAGAGAGAGAGAGGGTCACC 59.436 57.143 0.00 0.00 0.00 4.02
111 112 0.254747 AGAGAGAGAGAGGGTCACCG 59.745 60.000 0.00 0.00 43.47 4.94
112 113 0.750182 GAGAGAGAGAGGGTCACCGG 60.750 65.000 0.00 0.00 43.47 5.28
113 114 2.363147 AGAGAGAGGGTCACCGGC 60.363 66.667 0.00 0.00 43.47 6.13
114 115 3.827898 GAGAGAGGGTCACCGGCG 61.828 72.222 0.00 0.00 43.47 6.46
115 116 4.361971 AGAGAGGGTCACCGGCGA 62.362 66.667 9.30 0.00 43.47 5.54
116 117 4.131088 GAGAGGGTCACCGGCGAC 62.131 72.222 14.39 14.39 43.47 5.19
128 129 3.173240 GGCGACGAGTTGACGAGC 61.173 66.667 6.42 0.00 37.99 5.03
129 130 2.126812 GCGACGAGTTGACGAGCT 60.127 61.111 6.42 0.00 37.99 4.09
130 131 2.147133 GCGACGAGTTGACGAGCTC 61.147 63.158 2.73 2.73 37.99 4.09
146 147 2.649034 TCGTGGAGGCGAGTCAAC 59.351 61.111 0.00 0.00 35.83 3.18
147 148 2.197605 TCGTGGAGGCGAGTCAACA 61.198 57.895 0.00 0.00 35.83 3.33
148 149 1.300620 CGTGGAGGCGAGTCAACAA 60.301 57.895 0.00 0.00 0.00 2.83
149 150 1.557443 CGTGGAGGCGAGTCAACAAC 61.557 60.000 0.00 0.00 0.00 3.32
150 151 0.531974 GTGGAGGCGAGTCAACAACA 60.532 55.000 0.00 0.00 0.00 3.33
151 152 0.249868 TGGAGGCGAGTCAACAACAG 60.250 55.000 0.00 0.00 0.00 3.16
152 153 0.033504 GGAGGCGAGTCAACAACAGA 59.966 55.000 0.00 0.00 0.00 3.41
153 154 1.423395 GAGGCGAGTCAACAACAGAG 58.577 55.000 0.00 0.00 0.00 3.35
154 155 1.000163 GAGGCGAGTCAACAACAGAGA 60.000 52.381 0.00 0.00 0.00 3.10
155 156 1.412710 AGGCGAGTCAACAACAGAGAA 59.587 47.619 0.00 0.00 0.00 2.87
156 157 2.037772 AGGCGAGTCAACAACAGAGAAT 59.962 45.455 0.00 0.00 0.00 2.40
157 158 2.808543 GGCGAGTCAACAACAGAGAATT 59.191 45.455 0.00 0.00 0.00 2.17
158 159 3.251004 GGCGAGTCAACAACAGAGAATTT 59.749 43.478 0.00 0.00 0.00 1.82
159 160 4.451096 GGCGAGTCAACAACAGAGAATTTA 59.549 41.667 0.00 0.00 0.00 1.40
160 161 5.389935 GGCGAGTCAACAACAGAGAATTTAG 60.390 44.000 0.00 0.00 0.00 1.85
161 162 5.389935 GCGAGTCAACAACAGAGAATTTAGG 60.390 44.000 0.00 0.00 0.00 2.69
162 163 5.120830 CGAGTCAACAACAGAGAATTTAGGG 59.879 44.000 0.00 0.00 0.00 3.53
163 164 5.941788 AGTCAACAACAGAGAATTTAGGGT 58.058 37.500 0.00 0.00 0.00 4.34
164 165 6.365520 AGTCAACAACAGAGAATTTAGGGTT 58.634 36.000 0.00 0.00 0.00 4.11
165 166 6.486993 AGTCAACAACAGAGAATTTAGGGTTC 59.513 38.462 0.00 0.00 0.00 3.62
166 167 6.262273 GTCAACAACAGAGAATTTAGGGTTCA 59.738 38.462 0.00 0.00 0.00 3.18
167 168 6.262273 TCAACAACAGAGAATTTAGGGTTCAC 59.738 38.462 0.00 0.00 0.00 3.18
168 169 5.690865 ACAACAGAGAATTTAGGGTTCACA 58.309 37.500 0.00 0.00 0.00 3.58
169 170 6.306987 ACAACAGAGAATTTAGGGTTCACAT 58.693 36.000 0.00 0.00 0.00 3.21
170 171 6.777580 ACAACAGAGAATTTAGGGTTCACATT 59.222 34.615 0.00 0.00 0.00 2.71
171 172 7.942341 ACAACAGAGAATTTAGGGTTCACATTA 59.058 33.333 0.00 0.00 0.00 1.90
172 173 8.960591 CAACAGAGAATTTAGGGTTCACATTAT 58.039 33.333 0.00 0.00 0.00 1.28
173 174 9.533831 AACAGAGAATTTAGGGTTCACATTATT 57.466 29.630 0.00 0.00 0.00 1.40
174 175 9.533831 ACAGAGAATTTAGGGTTCACATTATTT 57.466 29.630 0.00 0.00 0.00 1.40
179 180 9.366216 GAATTTAGGGTTCACATTATTTTGACC 57.634 33.333 0.00 0.00 0.00 4.02
180 181 6.503589 TTAGGGTTCACATTATTTTGACCG 57.496 37.500 0.00 0.00 0.00 4.79
181 182 4.658063 AGGGTTCACATTATTTTGACCGA 58.342 39.130 0.00 0.00 0.00 4.69
182 183 5.074115 AGGGTTCACATTATTTTGACCGAA 58.926 37.500 0.00 0.00 0.00 4.30
183 184 5.536916 AGGGTTCACATTATTTTGACCGAAA 59.463 36.000 0.00 0.00 0.00 3.46
184 185 6.041069 AGGGTTCACATTATTTTGACCGAAAA 59.959 34.615 0.00 0.00 37.93 2.29
185 186 6.702282 GGGTTCACATTATTTTGACCGAAAAA 59.298 34.615 0.00 0.00 37.10 1.94
186 187 7.386573 GGGTTCACATTATTTTGACCGAAAAAT 59.613 33.333 8.02 8.02 41.45 1.82
187 188 8.769891 GGTTCACATTATTTTGACCGAAAAATT 58.230 29.630 8.17 0.00 39.73 1.82
188 189 9.579610 GTTCACATTATTTTGACCGAAAAATTG 57.420 29.630 8.17 5.47 39.73 2.32
189 190 8.879342 TCACATTATTTTGACCGAAAAATTGT 57.121 26.923 8.17 5.93 39.73 2.71
190 191 8.973378 TCACATTATTTTGACCGAAAAATTGTC 58.027 29.630 8.17 0.00 39.73 3.18
191 192 8.977505 CACATTATTTTGACCGAAAAATTGTCT 58.022 29.630 8.17 0.00 39.73 3.41
192 193 9.541143 ACATTATTTTGACCGAAAAATTGTCTT 57.459 25.926 8.17 0.00 39.73 3.01
216 217 6.597832 TTTTGAAAAGAAGTCAAAGGGTGA 57.402 33.333 0.47 0.00 43.76 4.02
217 218 6.790232 TTTGAAAAGAAGTCAAAGGGTGAT 57.210 33.333 0.00 0.00 39.46 3.06
218 219 6.790232 TTGAAAAGAAGTCAAAGGGTGATT 57.210 33.333 0.00 0.00 38.90 2.57
219 220 6.790232 TGAAAAGAAGTCAAAGGGTGATTT 57.210 33.333 0.00 0.00 38.78 2.17
220 221 7.181569 TGAAAAGAAGTCAAAGGGTGATTTT 57.818 32.000 0.00 0.00 36.39 1.82
221 222 8.299990 TGAAAAGAAGTCAAAGGGTGATTTTA 57.700 30.769 0.00 0.00 36.39 1.52
222 223 8.923270 TGAAAAGAAGTCAAAGGGTGATTTTAT 58.077 29.630 0.00 0.00 36.39 1.40
223 224 9.764363 GAAAAGAAGTCAAAGGGTGATTTTATT 57.236 29.630 0.00 0.00 36.39 1.40
226 227 9.764363 AAGAAGTCAAAGGGTGATTTTATTTTC 57.236 29.630 0.00 0.00 36.39 2.29
227 228 8.082242 AGAAGTCAAAGGGTGATTTTATTTTCG 58.918 33.333 0.00 0.00 36.39 3.46
228 229 7.284919 AGTCAAAGGGTGATTTTATTTTCGT 57.715 32.000 0.00 0.00 38.90 3.85
229 230 7.145323 AGTCAAAGGGTGATTTTATTTTCGTG 58.855 34.615 0.00 0.00 38.90 4.35
230 231 7.013846 AGTCAAAGGGTGATTTTATTTTCGTGA 59.986 33.333 0.00 0.00 38.90 4.35
231 232 7.812669 GTCAAAGGGTGATTTTATTTTCGTGAT 59.187 33.333 0.00 0.00 38.90 3.06
232 233 8.364142 TCAAAGGGTGATTTTATTTTCGTGATT 58.636 29.630 0.00 0.00 0.00 2.57
233 234 8.987890 CAAAGGGTGATTTTATTTTCGTGATTT 58.012 29.630 0.00 0.00 0.00 2.17
234 235 9.554395 AAAGGGTGATTTTATTTTCGTGATTTT 57.446 25.926 0.00 0.00 0.00 1.82
235 236 9.554395 AAGGGTGATTTTATTTTCGTGATTTTT 57.446 25.926 0.00 0.00 0.00 1.94
259 260 9.959749 TTTTTCTCACATGTACAATAAAAGGTC 57.040 29.630 0.00 0.00 0.00 3.85
260 261 8.684386 TTTCTCACATGTACAATAAAAGGTCA 57.316 30.769 0.00 0.00 0.00 4.02
261 262 8.684386 TTCTCACATGTACAATAAAAGGTCAA 57.316 30.769 0.00 0.00 0.00 3.18
262 263 8.322906 TCTCACATGTACAATAAAAGGTCAAG 57.677 34.615 0.00 0.00 0.00 3.02
263 264 7.936847 TCTCACATGTACAATAAAAGGTCAAGT 59.063 33.333 0.00 0.00 0.00 3.16
264 265 8.458573 TCACATGTACAATAAAAGGTCAAGTT 57.541 30.769 0.00 0.00 0.00 2.66
265 266 8.908903 TCACATGTACAATAAAAGGTCAAGTTT 58.091 29.630 0.00 0.00 0.00 2.66
324 325 9.435688 ACTTTTTGTTGAATTGCTAACTTCTTT 57.564 25.926 0.00 0.00 0.00 2.52
328 329 8.419076 TTGTTGAATTGCTAACTTCTTTTTCC 57.581 30.769 0.00 0.00 0.00 3.13
329 330 7.551585 TGTTGAATTGCTAACTTCTTTTTCCA 58.448 30.769 0.00 0.00 0.00 3.53
330 331 8.203485 TGTTGAATTGCTAACTTCTTTTTCCAT 58.797 29.630 0.00 0.00 0.00 3.41
331 332 9.045223 GTTGAATTGCTAACTTCTTTTTCCATT 57.955 29.630 0.00 0.00 0.00 3.16
332 333 9.612066 TTGAATTGCTAACTTCTTTTTCCATTT 57.388 25.926 0.00 0.00 0.00 2.32
335 336 9.710900 AATTGCTAACTTCTTTTTCCATTTAGG 57.289 29.630 0.00 0.00 39.47 2.69
336 337 7.227049 TGCTAACTTCTTTTTCCATTTAGGG 57.773 36.000 0.00 0.00 38.24 3.53
337 338 6.780522 TGCTAACTTCTTTTTCCATTTAGGGT 59.219 34.615 0.00 0.00 38.24 4.34
338 339 7.090808 GCTAACTTCTTTTTCCATTTAGGGTG 58.909 38.462 0.00 0.00 38.24 4.61
339 340 7.255836 GCTAACTTCTTTTTCCATTTAGGGTGT 60.256 37.037 0.00 0.00 38.24 4.16
340 341 9.292195 CTAACTTCTTTTTCCATTTAGGGTGTA 57.708 33.333 0.00 0.00 38.24 2.90
341 342 8.721133 AACTTCTTTTTCCATTTAGGGTGTAT 57.279 30.769 0.00 0.00 38.24 2.29
342 343 9.816787 AACTTCTTTTTCCATTTAGGGTGTATA 57.183 29.630 0.00 0.00 38.24 1.47
343 344 9.990868 ACTTCTTTTTCCATTTAGGGTGTATAT 57.009 29.630 0.00 0.00 38.24 0.86
360 361 5.747342 TGTATATACACCCAGGAACCAAAC 58.253 41.667 11.62 0.00 0.00 2.93
361 362 2.194201 ATACACCCAGGAACCAAACG 57.806 50.000 0.00 0.00 0.00 3.60
362 363 0.838608 TACACCCAGGAACCAAACGT 59.161 50.000 0.00 0.00 0.00 3.99
363 364 0.033894 ACACCCAGGAACCAAACGTT 60.034 50.000 0.00 0.00 37.41 3.99
369 370 2.640989 GAACCAAACGTTCCCGCC 59.359 61.111 0.00 0.00 44.46 6.13
370 371 2.908428 AACCAAACGTTCCCGCCC 60.908 61.111 0.00 0.00 37.70 6.13
395 396 1.280457 CACCCCAGCTCTTCCTACTT 58.720 55.000 0.00 0.00 0.00 2.24
461 462 1.992557 TCTAACAATCAAGGGGCTGGT 59.007 47.619 0.00 0.00 0.00 4.00
512 513 9.503427 GTCATTTTCCAATAAACTTTCGATAGG 57.497 33.333 7.80 0.00 0.00 2.57
562 568 9.988815 GTATATGATTCAGTCTTAATCAGTGGT 57.011 33.333 13.47 2.05 44.27 4.16
564 570 9.911788 ATATGATTCAGTCTTAATCAGTGGTTT 57.088 29.630 13.47 1.18 44.27 3.27
565 571 8.641498 ATGATTCAGTCTTAATCAGTGGTTTT 57.359 30.769 13.47 0.00 44.27 2.43
566 572 8.099364 TGATTCAGTCTTAATCAGTGGTTTTC 57.901 34.615 5.50 0.00 38.19 2.29
567 573 7.939039 TGATTCAGTCTTAATCAGTGGTTTTCT 59.061 33.333 5.50 0.00 38.19 2.52
568 574 8.697507 ATTCAGTCTTAATCAGTGGTTTTCTT 57.302 30.769 0.00 0.00 0.00 2.52
569 575 9.793259 ATTCAGTCTTAATCAGTGGTTTTCTTA 57.207 29.630 0.00 0.00 0.00 2.10
570 576 9.621629 TTCAGTCTTAATCAGTGGTTTTCTTAA 57.378 29.630 0.00 0.00 0.00 1.85
571 577 9.273016 TCAGTCTTAATCAGTGGTTTTCTTAAG 57.727 33.333 0.00 0.00 0.00 1.85
572 578 8.017946 CAGTCTTAATCAGTGGTTTTCTTAAGC 58.982 37.037 0.00 0.00 0.00 3.09
573 579 7.719633 AGTCTTAATCAGTGGTTTTCTTAAGCA 59.280 33.333 0.00 0.00 0.00 3.91
574 580 8.349983 GTCTTAATCAGTGGTTTTCTTAAGCAA 58.650 33.333 0.00 0.00 0.00 3.91
575 581 8.908903 TCTTAATCAGTGGTTTTCTTAAGCAAA 58.091 29.630 0.00 0.00 0.00 3.68
576 582 9.696917 CTTAATCAGTGGTTTTCTTAAGCAAAT 57.303 29.630 3.60 0.00 0.00 2.32
581 587 9.474920 TCAGTGGTTTTCTTAAGCAAATAATTG 57.525 29.630 3.60 3.52 39.65 2.32
582 588 9.260002 CAGTGGTTTTCTTAAGCAAATAATTGT 57.740 29.630 3.60 0.00 38.85 2.71
600 606 9.686683 AATAATTGTAGTATATGATTCAGGGGC 57.313 33.333 0.00 0.00 0.00 5.80
601 607 6.959606 ATTGTAGTATATGATTCAGGGGCT 57.040 37.500 0.00 0.00 0.00 5.19
602 608 6.763715 TTGTAGTATATGATTCAGGGGCTT 57.236 37.500 0.00 0.00 0.00 4.35
603 609 6.763715 TGTAGTATATGATTCAGGGGCTTT 57.236 37.500 0.00 0.00 0.00 3.51
604 610 6.533730 TGTAGTATATGATTCAGGGGCTTTG 58.466 40.000 0.00 0.00 0.00 2.77
605 611 4.401925 AGTATATGATTCAGGGGCTTTGC 58.598 43.478 0.00 0.00 0.00 3.68
606 612 3.607490 ATATGATTCAGGGGCTTTGCT 57.393 42.857 0.00 0.00 0.00 3.91
607 613 4.729552 ATATGATTCAGGGGCTTTGCTA 57.270 40.909 0.00 0.00 0.00 3.49
608 614 2.128771 TGATTCAGGGGCTTTGCTAC 57.871 50.000 0.00 0.00 0.00 3.58
609 615 1.354031 TGATTCAGGGGCTTTGCTACA 59.646 47.619 0.00 0.00 0.00 2.74
610 616 2.025037 TGATTCAGGGGCTTTGCTACAT 60.025 45.455 0.00 0.00 0.00 2.29
611 617 2.128771 TTCAGGGGCTTTGCTACATC 57.871 50.000 0.00 0.00 0.00 3.06
612 618 1.289160 TCAGGGGCTTTGCTACATCT 58.711 50.000 0.00 0.00 0.00 2.90
613 619 2.477245 TCAGGGGCTTTGCTACATCTA 58.523 47.619 0.00 0.00 0.00 1.98
614 620 2.170607 TCAGGGGCTTTGCTACATCTAC 59.829 50.000 0.00 0.00 0.00 2.59
615 621 2.092968 CAGGGGCTTTGCTACATCTACA 60.093 50.000 0.00 0.00 0.00 2.74
616 622 2.171448 AGGGGCTTTGCTACATCTACAG 59.829 50.000 0.00 0.00 0.00 2.74
617 623 2.565841 GGGCTTTGCTACATCTACAGG 58.434 52.381 0.00 0.00 0.00 4.00
618 624 1.943340 GGCTTTGCTACATCTACAGGC 59.057 52.381 0.00 0.00 0.00 4.85
619 625 2.632377 GCTTTGCTACATCTACAGGCA 58.368 47.619 0.00 0.00 0.00 4.75
620 626 3.009723 GCTTTGCTACATCTACAGGCAA 58.990 45.455 0.00 0.00 40.43 4.52
621 627 3.629398 GCTTTGCTACATCTACAGGCAAT 59.371 43.478 0.00 0.00 41.47 3.56
622 628 4.096984 GCTTTGCTACATCTACAGGCAATT 59.903 41.667 0.00 0.00 41.47 2.32
623 629 5.296780 GCTTTGCTACATCTACAGGCAATTA 59.703 40.000 0.00 0.00 41.47 1.40
624 630 6.677781 TTTGCTACATCTACAGGCAATTAC 57.322 37.500 0.00 0.00 41.47 1.89
625 631 4.368315 TGCTACATCTACAGGCAATTACG 58.632 43.478 0.00 0.00 0.00 3.18
626 632 3.741344 GCTACATCTACAGGCAATTACGG 59.259 47.826 0.00 0.00 0.00 4.02
627 633 3.194005 ACATCTACAGGCAATTACGGG 57.806 47.619 0.00 0.00 0.00 5.28
628 634 2.158813 ACATCTACAGGCAATTACGGGG 60.159 50.000 0.00 0.00 0.00 5.73
629 635 1.575419 TCTACAGGCAATTACGGGGT 58.425 50.000 0.00 0.00 0.00 4.95
630 636 1.208535 TCTACAGGCAATTACGGGGTG 59.791 52.381 0.00 0.00 0.00 4.61
631 637 0.253610 TACAGGCAATTACGGGGTGG 59.746 55.000 0.00 0.00 0.00 4.61
632 638 1.752694 CAGGCAATTACGGGGTGGG 60.753 63.158 0.00 0.00 0.00 4.61
633 639 1.926489 AGGCAATTACGGGGTGGGA 60.926 57.895 0.00 0.00 0.00 4.37
634 640 1.000646 GGCAATTACGGGGTGGGAA 60.001 57.895 0.00 0.00 0.00 3.97
635 641 1.035385 GGCAATTACGGGGTGGGAAG 61.035 60.000 0.00 0.00 0.00 3.46
636 642 0.323087 GCAATTACGGGGTGGGAAGT 60.323 55.000 0.00 0.00 0.00 3.01
637 643 1.889262 GCAATTACGGGGTGGGAAGTT 60.889 52.381 0.00 0.00 0.00 2.66
638 644 2.521126 CAATTACGGGGTGGGAAGTTT 58.479 47.619 0.00 0.00 0.00 2.66
639 645 2.894765 CAATTACGGGGTGGGAAGTTTT 59.105 45.455 0.00 0.00 0.00 2.43
640 646 4.080687 CAATTACGGGGTGGGAAGTTTTA 58.919 43.478 0.00 0.00 0.00 1.52
641 647 2.857186 TACGGGGTGGGAAGTTTTAC 57.143 50.000 0.00 0.00 0.00 2.01
642 648 0.845337 ACGGGGTGGGAAGTTTTACA 59.155 50.000 0.00 0.00 0.00 2.41
643 649 1.202842 ACGGGGTGGGAAGTTTTACAG 60.203 52.381 0.00 0.00 0.00 2.74
644 650 1.884928 CGGGGTGGGAAGTTTTACAGG 60.885 57.143 0.00 0.00 0.00 4.00
645 651 1.549265 GGGGTGGGAAGTTTTACAGGG 60.549 57.143 0.00 0.00 0.00 4.45
646 652 1.146359 GGGTGGGAAGTTTTACAGGGT 59.854 52.381 0.00 0.00 0.00 4.34
647 653 2.235891 GGTGGGAAGTTTTACAGGGTG 58.764 52.381 0.00 0.00 0.00 4.61
648 654 2.158579 GGTGGGAAGTTTTACAGGGTGA 60.159 50.000 0.00 0.00 0.00 4.02
649 655 2.882761 GTGGGAAGTTTTACAGGGTGAC 59.117 50.000 0.00 0.00 0.00 3.67
650 656 2.781174 TGGGAAGTTTTACAGGGTGACT 59.219 45.455 0.00 0.00 0.00 3.41
651 657 3.975312 TGGGAAGTTTTACAGGGTGACTA 59.025 43.478 0.00 0.00 0.00 2.59
652 658 4.041198 TGGGAAGTTTTACAGGGTGACTAG 59.959 45.833 0.00 0.00 0.00 2.57
653 659 4.565028 GGGAAGTTTTACAGGGTGACTAGG 60.565 50.000 0.00 0.00 0.00 3.02
654 660 4.041321 GGAAGTTTTACAGGGTGACTAGGT 59.959 45.833 0.00 0.00 0.00 3.08
655 661 5.246883 GGAAGTTTTACAGGGTGACTAGGTA 59.753 44.000 0.00 0.00 0.00 3.08
656 662 5.997384 AGTTTTACAGGGTGACTAGGTAG 57.003 43.478 0.00 0.00 0.00 3.18
657 663 5.400870 AGTTTTACAGGGTGACTAGGTAGT 58.599 41.667 0.00 0.00 39.71 2.73
658 664 5.842874 AGTTTTACAGGGTGACTAGGTAGTT 59.157 40.000 0.00 0.00 36.50 2.24
659 665 6.328410 AGTTTTACAGGGTGACTAGGTAGTTT 59.672 38.462 0.00 0.00 36.50 2.66
660 666 6.752285 TTTACAGGGTGACTAGGTAGTTTT 57.248 37.500 0.00 0.00 36.50 2.43
661 667 6.752285 TTACAGGGTGACTAGGTAGTTTTT 57.248 37.500 0.00 0.00 36.50 1.94
662 668 7.854166 TTACAGGGTGACTAGGTAGTTTTTA 57.146 36.000 0.00 0.00 36.50 1.52
663 669 6.752285 ACAGGGTGACTAGGTAGTTTTTAA 57.248 37.500 0.00 0.00 36.50 1.52
664 670 7.325725 ACAGGGTGACTAGGTAGTTTTTAAT 57.674 36.000 0.00 0.00 36.50 1.40
665 671 7.752638 ACAGGGTGACTAGGTAGTTTTTAATT 58.247 34.615 0.00 0.00 36.50 1.40
666 672 8.883302 ACAGGGTGACTAGGTAGTTTTTAATTA 58.117 33.333 0.00 0.00 36.50 1.40
667 673 9.379791 CAGGGTGACTAGGTAGTTTTTAATTAG 57.620 37.037 0.00 0.00 36.50 1.73
668 674 9.109246 AGGGTGACTAGGTAGTTTTTAATTAGT 57.891 33.333 0.00 0.00 36.50 2.24
669 675 9.730705 GGGTGACTAGGTAGTTTTTAATTAGTT 57.269 33.333 0.00 0.00 36.50 2.24
681 687 9.809395 AGTTTTTAATTAGTTTAGAAGGAGCCT 57.191 29.630 0.00 0.00 0.00 4.58
682 688 9.841880 GTTTTTAATTAGTTTAGAAGGAGCCTG 57.158 33.333 0.00 0.00 0.00 4.85
683 689 9.582648 TTTTTAATTAGTTTAGAAGGAGCCTGT 57.417 29.630 0.00 0.00 0.00 4.00
688 694 8.738645 ATTAGTTTAGAAGGAGCCTGTAATTG 57.261 34.615 0.00 0.00 0.00 2.32
689 695 4.944317 AGTTTAGAAGGAGCCTGTAATTGC 59.056 41.667 0.00 0.00 0.00 3.56
690 696 2.426842 AGAAGGAGCCTGTAATTGCC 57.573 50.000 0.00 0.00 0.00 4.52
691 697 1.918957 AGAAGGAGCCTGTAATTGCCT 59.081 47.619 0.00 0.00 0.00 4.75
692 698 2.019984 GAAGGAGCCTGTAATTGCCTG 58.980 52.381 0.00 0.00 0.00 4.85
693 699 0.995024 AGGAGCCTGTAATTGCCTGT 59.005 50.000 0.00 0.00 0.00 4.00
694 700 2.196595 AGGAGCCTGTAATTGCCTGTA 58.803 47.619 0.00 0.00 0.00 2.74
695 701 2.576191 AGGAGCCTGTAATTGCCTGTAA 59.424 45.455 0.00 0.00 0.00 2.41
696 702 2.945668 GGAGCCTGTAATTGCCTGTAAG 59.054 50.000 0.00 0.00 0.00 2.34
697 703 3.370527 GGAGCCTGTAATTGCCTGTAAGA 60.371 47.826 0.00 0.00 34.07 2.10
698 704 4.455606 GAGCCTGTAATTGCCTGTAAGAT 58.544 43.478 0.00 0.00 34.07 2.40
699 705 4.455606 AGCCTGTAATTGCCTGTAAGATC 58.544 43.478 0.00 0.00 34.07 2.75
700 706 3.565902 GCCTGTAATTGCCTGTAAGATCC 59.434 47.826 0.00 0.00 34.07 3.36
701 707 4.687219 GCCTGTAATTGCCTGTAAGATCCT 60.687 45.833 0.00 0.00 34.07 3.24
702 708 5.454755 GCCTGTAATTGCCTGTAAGATCCTA 60.455 44.000 0.00 0.00 34.07 2.94
703 709 6.745474 GCCTGTAATTGCCTGTAAGATCCTAT 60.745 42.308 0.00 0.00 34.07 2.57
704 710 7.527196 GCCTGTAATTGCCTGTAAGATCCTATA 60.527 40.741 0.00 0.00 34.07 1.31
705 711 8.543774 CCTGTAATTGCCTGTAAGATCCTATAT 58.456 37.037 0.00 0.00 34.07 0.86
706 712 9.376075 CTGTAATTGCCTGTAAGATCCTATATG 57.624 37.037 0.00 0.00 34.07 1.78
707 713 8.880244 TGTAATTGCCTGTAAGATCCTATATGT 58.120 33.333 0.00 0.00 34.07 2.29
708 714 9.372369 GTAATTGCCTGTAAGATCCTATATGTC 57.628 37.037 0.00 0.00 34.07 3.06
709 715 7.805083 ATTGCCTGTAAGATCCTATATGTCT 57.195 36.000 0.00 0.00 34.07 3.41
710 716 8.901472 ATTGCCTGTAAGATCCTATATGTCTA 57.099 34.615 0.00 0.00 34.07 2.59
711 717 7.946381 TGCCTGTAAGATCCTATATGTCTAG 57.054 40.000 0.00 0.00 34.07 2.43
712 718 6.378564 TGCCTGTAAGATCCTATATGTCTAGC 59.621 42.308 0.00 0.00 34.07 3.42
713 719 6.378564 GCCTGTAAGATCCTATATGTCTAGCA 59.621 42.308 0.00 0.00 34.07 3.49
714 720 7.069331 GCCTGTAAGATCCTATATGTCTAGCAT 59.931 40.741 5.25 5.25 37.66 3.79
715 721 8.976353 CCTGTAAGATCCTATATGTCTAGCATT 58.024 37.037 5.22 0.00 35.86 3.56
729 735 7.692460 TGTCTAGCATTTTTGATGATTCAGT 57.308 32.000 0.00 0.00 32.27 3.41
730 736 7.755591 TGTCTAGCATTTTTGATGATTCAGTC 58.244 34.615 0.00 0.00 32.27 3.51
731 737 7.609146 TGTCTAGCATTTTTGATGATTCAGTCT 59.391 33.333 0.00 0.00 32.27 3.24
732 738 8.457261 GTCTAGCATTTTTGATGATTCAGTCTT 58.543 33.333 0.00 0.00 32.27 3.01
733 739 9.671279 TCTAGCATTTTTGATGATTCAGTCTTA 57.329 29.630 0.00 0.00 32.27 2.10
736 742 9.798994 AGCATTTTTGATGATTCAGTCTTAATC 57.201 29.630 0.49 0.49 34.55 1.75
737 743 8.740369 GCATTTTTGATGATTCAGTCTTAATCG 58.260 33.333 3.00 0.00 36.35 3.34
738 744 9.229784 CATTTTTGATGATTCAGTCTTAATCGG 57.770 33.333 3.00 0.00 36.35 4.18
754 760 1.660264 CGGTGGTTTTTGCCGCTTC 60.660 57.895 0.00 0.00 38.99 3.86
859 865 9.528018 TTGTTGAAGTTCCTTGTTTTAATCATC 57.472 29.630 0.00 0.00 0.00 2.92
901 912 3.206150 AGTGAACACACATGGACTTGAC 58.794 45.455 7.68 0.00 37.04 3.18
904 915 4.814234 GTGAACACACATGGACTTGACTAA 59.186 41.667 0.00 0.00 34.98 2.24
921 932 9.120538 ACTTGACTAAATTAATCCGCATGTTAT 57.879 29.630 0.00 0.00 0.00 1.89
948 959 0.586256 CGCATTGCATCAACCGTACG 60.586 55.000 8.69 8.69 0.00 3.67
1236 1247 4.071875 ACGCCGGCCATGTACGAA 62.072 61.111 23.46 0.00 0.00 3.85
1350 1361 1.216710 GGCCAGAGTCTTCCTCGTG 59.783 63.158 0.00 0.00 45.44 4.35
1363 1374 0.108615 CCTCGTGGAATCGCAGTTCT 60.109 55.000 0.00 0.00 34.57 3.01
1367 1378 0.095417 GTGGAATCGCAGTTCTTCGC 59.905 55.000 0.00 0.00 0.00 4.70
2033 2074 2.584391 GGAAGCCAGAGTGGGACGT 61.584 63.158 0.00 0.00 38.19 4.34
2118 2162 0.332972 GCCTGGAAATCAAGGACCCT 59.667 55.000 8.09 0.00 0.00 4.34
2487 2534 2.030551 CGCTACGGAGGCTGACATA 58.969 57.895 0.00 0.00 0.00 2.29
2723 2782 9.968743 GTAACTTCTGTGTTACTGTTATATTGC 57.031 33.333 14.31 0.00 45.08 3.56
2724 2783 8.848474 AACTTCTGTGTTACTGTTATATTGCT 57.152 30.769 0.00 0.00 0.00 3.91
2725 2784 8.256611 ACTTCTGTGTTACTGTTATATTGCTG 57.743 34.615 0.00 0.00 0.00 4.41
2726 2785 7.334421 ACTTCTGTGTTACTGTTATATTGCTGG 59.666 37.037 0.00 0.00 0.00 4.85
2727 2786 6.112734 TCTGTGTTACTGTTATATTGCTGGG 58.887 40.000 0.00 0.00 0.00 4.45
2728 2787 6.056090 TGTGTTACTGTTATATTGCTGGGA 57.944 37.500 0.00 0.00 0.00 4.37
2729 2788 6.112734 TGTGTTACTGTTATATTGCTGGGAG 58.887 40.000 0.00 0.00 0.00 4.30
2730 2789 6.113411 GTGTTACTGTTATATTGCTGGGAGT 58.887 40.000 0.00 0.00 0.00 3.85
2731 2790 7.093245 TGTGTTACTGTTATATTGCTGGGAGTA 60.093 37.037 0.00 0.00 0.00 2.59
2732 2791 7.931948 GTGTTACTGTTATATTGCTGGGAGTAT 59.068 37.037 0.00 0.00 0.00 2.12
2733 2792 8.148351 TGTTACTGTTATATTGCTGGGAGTATC 58.852 37.037 0.00 0.00 0.00 2.24
2734 2793 8.368668 GTTACTGTTATATTGCTGGGAGTATCT 58.631 37.037 0.00 0.00 33.73 1.98
2735 2794 9.596308 TTACTGTTATATTGCTGGGAGTATCTA 57.404 33.333 0.00 0.00 33.73 1.98
2736 2795 8.128322 ACTGTTATATTGCTGGGAGTATCTAG 57.872 38.462 0.00 0.00 33.73 2.43
2737 2796 7.950684 ACTGTTATATTGCTGGGAGTATCTAGA 59.049 37.037 0.00 0.00 33.73 2.43
2738 2797 8.721133 TGTTATATTGCTGGGAGTATCTAGAA 57.279 34.615 0.00 0.00 33.73 2.10
2739 2798 8.585881 TGTTATATTGCTGGGAGTATCTAGAAC 58.414 37.037 0.00 0.00 33.73 3.01
2740 2799 8.808092 GTTATATTGCTGGGAGTATCTAGAACT 58.192 37.037 0.00 1.78 33.73 3.01
2741 2800 5.799827 ATTGCTGGGAGTATCTAGAACTC 57.200 43.478 18.94 18.94 42.19 3.01
2742 2801 4.251103 TGCTGGGAGTATCTAGAACTCA 57.749 45.455 24.15 11.94 44.25 3.41
2743 2802 4.809193 TGCTGGGAGTATCTAGAACTCAT 58.191 43.478 24.15 3.49 44.25 2.90
2744 2803 4.830046 TGCTGGGAGTATCTAGAACTCATC 59.170 45.833 24.15 18.70 44.25 2.92
2745 2804 5.076873 GCTGGGAGTATCTAGAACTCATCT 58.923 45.833 24.15 8.50 44.25 2.90
2746 2805 6.183361 TGCTGGGAGTATCTAGAACTCATCTA 60.183 42.308 24.15 12.72 44.25 1.98
2774 2833 9.911788 ATGAGTTATAATTTGGTCTCATTCACT 57.088 29.630 7.75 0.00 38.83 3.41
2775 2834 9.739276 TGAGTTATAATTTGGTCTCATTCACTT 57.261 29.630 0.00 0.00 0.00 3.16
2783 2842 9.883142 AATTTGGTCTCATTCACTTTAAAAACA 57.117 25.926 0.00 0.00 0.00 2.83
2784 2843 9.883142 ATTTGGTCTCATTCACTTTAAAAACAA 57.117 25.926 0.00 0.00 0.00 2.83
2785 2844 8.925161 TTGGTCTCATTCACTTTAAAAACAAG 57.075 30.769 0.00 0.00 0.00 3.16
2786 2845 8.287439 TGGTCTCATTCACTTTAAAAACAAGA 57.713 30.769 0.00 0.00 0.00 3.02
2787 2846 8.744652 TGGTCTCATTCACTTTAAAAACAAGAA 58.255 29.630 0.00 0.00 0.00 2.52
2788 2847 9.020813 GGTCTCATTCACTTTAAAAACAAGAAC 57.979 33.333 0.00 0.00 0.00 3.01
2789 2848 9.567848 GTCTCATTCACTTTAAAAACAAGAACA 57.432 29.630 0.00 0.00 0.00 3.18
2800 2859 9.720769 TTTAAAAACAAGAACAAATACAACCCA 57.279 25.926 0.00 0.00 0.00 4.51
2801 2860 7.603963 AAAAACAAGAACAAATACAACCCAC 57.396 32.000 0.00 0.00 0.00 4.61
2802 2861 4.561735 ACAAGAACAAATACAACCCACG 57.438 40.909 0.00 0.00 0.00 4.94
2803 2862 3.949113 ACAAGAACAAATACAACCCACGT 59.051 39.130 0.00 0.00 0.00 4.49
2804 2863 4.035909 ACAAGAACAAATACAACCCACGTC 59.964 41.667 0.00 0.00 0.00 4.34
2805 2864 3.811083 AGAACAAATACAACCCACGTCA 58.189 40.909 0.00 0.00 0.00 4.35
2806 2865 3.813166 AGAACAAATACAACCCACGTCAG 59.187 43.478 0.00 0.00 0.00 3.51
2807 2866 1.877443 ACAAATACAACCCACGTCAGC 59.123 47.619 0.00 0.00 0.00 4.26
2808 2867 1.876799 CAAATACAACCCACGTCAGCA 59.123 47.619 0.00 0.00 0.00 4.41
2809 2868 1.519408 AATACAACCCACGTCAGCAC 58.481 50.000 0.00 0.00 0.00 4.40
2810 2869 0.394938 ATACAACCCACGTCAGCACA 59.605 50.000 0.00 0.00 0.00 4.57
2811 2870 0.531090 TACAACCCACGTCAGCACAC 60.531 55.000 0.00 0.00 0.00 3.82
2812 2871 1.817520 CAACCCACGTCAGCACACA 60.818 57.895 0.00 0.00 0.00 3.72
2813 2872 1.817941 AACCCACGTCAGCACACAC 60.818 57.895 0.00 0.00 0.00 3.82
2814 2873 2.203001 CCCACGTCAGCACACACA 60.203 61.111 0.00 0.00 0.00 3.72
2815 2874 2.534019 CCCACGTCAGCACACACAC 61.534 63.158 0.00 0.00 0.00 3.82
2816 2875 1.813337 CCACGTCAGCACACACACA 60.813 57.895 0.00 0.00 0.00 3.72
2817 2876 1.159713 CCACGTCAGCACACACACAT 61.160 55.000 0.00 0.00 0.00 3.21
2818 2877 0.233074 CACGTCAGCACACACACATC 59.767 55.000 0.00 0.00 0.00 3.06
2819 2878 0.104855 ACGTCAGCACACACACATCT 59.895 50.000 0.00 0.00 0.00 2.90
2820 2879 1.220529 CGTCAGCACACACACATCTT 58.779 50.000 0.00 0.00 0.00 2.40
2821 2880 2.223947 ACGTCAGCACACACACATCTTA 60.224 45.455 0.00 0.00 0.00 2.10
2822 2881 2.995939 CGTCAGCACACACACATCTTAT 59.004 45.455 0.00 0.00 0.00 1.73
2823 2882 4.173256 CGTCAGCACACACACATCTTATA 58.827 43.478 0.00 0.00 0.00 0.98
2824 2883 4.266265 CGTCAGCACACACACATCTTATAG 59.734 45.833 0.00 0.00 0.00 1.31
2825 2884 4.033358 GTCAGCACACACACATCTTATAGC 59.967 45.833 0.00 0.00 0.00 2.97
2826 2885 3.934579 CAGCACACACACATCTTATAGCA 59.065 43.478 0.00 0.00 0.00 3.49
2827 2886 4.573607 CAGCACACACACATCTTATAGCAT 59.426 41.667 0.00 0.00 0.00 3.79
2828 2887 4.813161 AGCACACACACATCTTATAGCATC 59.187 41.667 0.00 0.00 0.00 3.91
2829 2888 4.571984 GCACACACACATCTTATAGCATCA 59.428 41.667 0.00 0.00 0.00 3.07
2830 2889 5.503031 GCACACACACATCTTATAGCATCAC 60.503 44.000 0.00 0.00 0.00 3.06
2831 2890 5.581874 CACACACACATCTTATAGCATCACA 59.418 40.000 0.00 0.00 0.00 3.58
2832 2891 6.259387 CACACACACATCTTATAGCATCACAT 59.741 38.462 0.00 0.00 0.00 3.21
2833 2892 6.481313 ACACACACATCTTATAGCATCACATC 59.519 38.462 0.00 0.00 0.00 3.06
2834 2893 5.994054 ACACACATCTTATAGCATCACATCC 59.006 40.000 0.00 0.00 0.00 3.51
2835 2894 5.993441 CACACATCTTATAGCATCACATCCA 59.007 40.000 0.00 0.00 0.00 3.41
2836 2895 6.484308 CACACATCTTATAGCATCACATCCAA 59.516 38.462 0.00 0.00 0.00 3.53
2837 2896 7.174426 CACACATCTTATAGCATCACATCCAAT 59.826 37.037 0.00 0.00 0.00 3.16
2838 2897 8.377799 ACACATCTTATAGCATCACATCCAATA 58.622 33.333 0.00 0.00 0.00 1.90
2839 2898 8.880750 CACATCTTATAGCATCACATCCAATAG 58.119 37.037 0.00 0.00 0.00 1.73
2840 2899 8.600668 ACATCTTATAGCATCACATCCAATAGT 58.399 33.333 0.00 0.00 0.00 2.12
2841 2900 9.445878 CATCTTATAGCATCACATCCAATAGTT 57.554 33.333 0.00 0.00 0.00 2.24
2849 2908 9.071276 AGCATCACATCCAATAGTTATAAAAGG 57.929 33.333 0.00 0.00 0.00 3.11
2850 2909 8.850156 GCATCACATCCAATAGTTATAAAAGGT 58.150 33.333 0.00 0.00 0.00 3.50
2853 2912 9.967451 TCACATCCAATAGTTATAAAAGGTGAA 57.033 29.630 0.00 0.00 0.00 3.18
2863 2922 8.934023 AGTTATAAAAGGTGAATGAGACCAAA 57.066 30.769 0.00 0.00 35.76 3.28
2864 2923 9.533831 AGTTATAAAAGGTGAATGAGACCAAAT 57.466 29.630 0.00 0.00 35.76 2.32
2871 2930 9.927081 AAAGGTGAATGAGACCAAATTATATCT 57.073 29.630 0.00 0.00 35.76 1.98
2872 2931 9.566432 AAGGTGAATGAGACCAAATTATATCTC 57.434 33.333 0.00 6.03 38.46 2.75
2895 2954 7.834068 TCATCTAGATGAGTTGTAGCAAAAC 57.166 36.000 27.93 0.00 42.42 2.43
2896 2955 7.615403 TCATCTAGATGAGTTGTAGCAAAACT 58.385 34.615 27.93 0.00 42.42 2.66
2897 2956 7.547019 TCATCTAGATGAGTTGTAGCAAAACTG 59.453 37.037 27.93 1.46 42.42 3.16
2946 3008 2.160022 TGCCGCAAGTAATCGGTAAAAC 59.840 45.455 0.00 0.00 46.79 2.43
2947 3009 2.160022 GCCGCAAGTAATCGGTAAAACA 59.840 45.455 2.58 0.00 46.79 2.83
2948 3010 3.739494 CCGCAAGTAATCGGTAAAACAC 58.261 45.455 0.00 0.00 40.72 3.32
2949 3011 3.186817 CCGCAAGTAATCGGTAAAACACA 59.813 43.478 0.00 0.00 40.72 3.72
2950 3012 4.142773 CCGCAAGTAATCGGTAAAACACAT 60.143 41.667 0.00 0.00 40.72 3.21
2963 3025 2.793278 AACACATGGAAAACGCTTCC 57.207 45.000 9.45 9.45 39.03 3.46
2996 3058 2.657237 CGAGTCTTTGGCCGGTCT 59.343 61.111 7.97 0.00 0.00 3.85
2997 3059 1.004918 CGAGTCTTTGGCCGGTCTT 60.005 57.895 7.97 0.00 0.00 3.01
3011 3073 1.957186 GTCTTGCACGGGCGTTACA 60.957 57.895 4.58 0.00 45.35 2.41
3060 3122 1.493446 CCGCCCTCCCTTTACCTTATT 59.507 52.381 0.00 0.00 0.00 1.40
3069 3131 7.366913 CCCTCCCTTTACCTTATTCTCTCAAAT 60.367 40.741 0.00 0.00 0.00 2.32
3092 3154 1.114627 CAGATCCACTCATCCCGTCA 58.885 55.000 0.00 0.00 0.00 4.35
3094 3156 2.103771 CAGATCCACTCATCCCGTCATT 59.896 50.000 0.00 0.00 0.00 2.57
3096 3158 1.567357 TCCACTCATCCCGTCATTCA 58.433 50.000 0.00 0.00 0.00 2.57
3101 3163 2.093973 ACTCATCCCGTCATTCACTCAC 60.094 50.000 0.00 0.00 0.00 3.51
3106 3168 1.078759 CCGTCATTCACTCACCTCGC 61.079 60.000 0.00 0.00 0.00 5.03
3121 3183 2.436646 CGCGACCCTGCCATTTCT 60.437 61.111 0.00 0.00 0.00 2.52
3130 3192 1.615116 CCTGCCATTTCTTCAGCTCCA 60.615 52.381 0.00 0.00 0.00 3.86
3131 3193 1.471684 CTGCCATTTCTTCAGCTCCAC 59.528 52.381 0.00 0.00 0.00 4.02
3132 3194 1.202915 TGCCATTTCTTCAGCTCCACA 60.203 47.619 0.00 0.00 0.00 4.17
3133 3195 1.471684 GCCATTTCTTCAGCTCCACAG 59.528 52.381 0.00 0.00 0.00 3.66
3153 3215 4.452733 CCGCTTCCACCTCGTCCC 62.453 72.222 0.00 0.00 0.00 4.46
3183 3245 2.343163 GACGAGATCCTCTGCCACCG 62.343 65.000 0.00 0.00 0.00 4.94
3185 3247 3.781770 GAGATCCTCTGCCACCGCG 62.782 68.421 0.00 0.00 38.08 6.46
3251 3317 2.811317 GCTGTTGCGTCCTCGGAG 60.811 66.667 0.00 0.00 38.80 4.63
3253 3319 4.717629 TGTTGCGTCCTCGGAGCG 62.718 66.667 0.00 0.00 40.82 5.03
3286 3352 1.347062 GGGGGATTTGCTTTCAACCA 58.653 50.000 0.00 0.00 30.75 3.67
3288 3354 1.970640 GGGGATTTGCTTTCAACCAGT 59.029 47.619 0.00 0.00 30.75 4.00
3301 3367 1.815003 CAACCAGTGGAGGATTTGCTC 59.185 52.381 18.40 0.00 0.00 4.26
3346 3432 1.801512 GATTTGCTTCAACCGGCGC 60.802 57.895 0.00 0.00 0.00 6.53
3414 3500 1.087771 GGCGCGGTAAGTTGCTGTAT 61.088 55.000 8.83 0.00 0.00 2.29
3437 3523 4.335400 TTCTTGATTTTTGCTGGAACCC 57.665 40.909 0.00 0.00 0.00 4.11
3441 3527 3.044894 TGATTTTTGCTGGAACCCCTTT 58.955 40.909 0.00 0.00 0.00 3.11
3442 3528 3.457749 TGATTTTTGCTGGAACCCCTTTT 59.542 39.130 0.00 0.00 0.00 2.27
3459 3545 4.309933 CCTTTTCTGATTTTGCTGGAACC 58.690 43.478 0.00 0.00 0.00 3.62
3460 3546 3.641437 TTTCTGATTTTGCTGGAACCG 57.359 42.857 0.00 0.00 0.00 4.44
3463 3549 0.958091 TGATTTTGCTGGAACCGGTG 59.042 50.000 8.52 0.00 0.00 4.94
3476 3562 3.453424 GAACCGGTGTTTTGATTTGCTT 58.547 40.909 8.52 0.00 33.97 3.91
3492 3578 3.681129 TTCAACAGGAAGGGGGCA 58.319 55.556 0.00 0.00 0.00 5.36
3495 3581 2.860971 AACAGGAAGGGGGCAGCT 60.861 61.111 0.00 0.00 0.00 4.24
3573 3659 1.352156 GAGTTGCTACAACCGGCGAG 61.352 60.000 9.30 0.06 0.00 5.03
3575 3661 2.575893 TTGCTACAACCGGCGAGGA 61.576 57.895 9.30 0.00 45.00 3.71
3576 3662 1.895020 TTGCTACAACCGGCGAGGAT 61.895 55.000 9.30 0.00 45.00 3.24
3577 3663 1.883084 GCTACAACCGGCGAGGATG 60.883 63.158 9.30 3.93 46.99 3.51
3578 3664 1.883084 CTACAACCGGCGAGGATGC 60.883 63.158 9.30 0.00 45.69 3.91
3579 3665 2.298158 CTACAACCGGCGAGGATGCT 62.298 60.000 9.30 0.00 45.69 3.79
3580 3666 2.572095 TACAACCGGCGAGGATGCTG 62.572 60.000 9.30 0.00 45.69 4.41
3595 3681 4.845580 CTGCTGGGGCGGCTACAG 62.846 72.222 22.92 22.92 42.25 2.74
3609 3695 1.032794 CTACAGCGAGGATGGTGCTA 58.967 55.000 0.00 0.00 40.94 3.49
3611 3697 1.068753 CAGCGAGGATGGTGCTAGG 59.931 63.158 0.00 0.00 37.15 3.02
3612 3698 2.136878 AGCGAGGATGGTGCTAGGG 61.137 63.158 0.00 0.00 37.15 3.53
3614 3700 2.423446 GAGGATGGTGCTAGGGCG 59.577 66.667 0.00 0.00 42.25 6.13
3639 3725 3.924238 GCGACGATGCCATGATTTT 57.076 47.368 0.00 0.00 0.00 1.82
3640 3726 2.193306 GCGACGATGCCATGATTTTT 57.807 45.000 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.901051 AATAAGAGGCACCCGACGCG 62.901 60.000 3.53 3.53 0.00 6.01
5 6 0.103572 TAATAAGAGGCACCCGACGC 59.896 55.000 0.00 0.00 0.00 5.19
6 7 2.800544 CAATAATAAGAGGCACCCGACG 59.199 50.000 0.00 0.00 0.00 5.12
7 8 2.548480 GCAATAATAAGAGGCACCCGAC 59.452 50.000 0.00 0.00 0.00 4.79
8 9 2.438021 AGCAATAATAAGAGGCACCCGA 59.562 45.455 0.00 0.00 0.00 5.14
9 10 2.851195 AGCAATAATAAGAGGCACCCG 58.149 47.619 0.00 0.00 0.00 5.28
10 11 3.570125 GGAAGCAATAATAAGAGGCACCC 59.430 47.826 0.00 0.00 0.00 4.61
11 12 3.251004 CGGAAGCAATAATAAGAGGCACC 59.749 47.826 0.00 0.00 0.00 5.01
12 13 3.251004 CCGGAAGCAATAATAAGAGGCAC 59.749 47.826 0.00 0.00 0.00 5.01
13 14 3.476552 CCGGAAGCAATAATAAGAGGCA 58.523 45.455 0.00 0.00 0.00 4.75
14 15 2.226674 GCCGGAAGCAATAATAAGAGGC 59.773 50.000 5.05 0.00 42.97 4.70
15 16 2.814336 GGCCGGAAGCAATAATAAGAGG 59.186 50.000 5.05 0.00 46.50 3.69
16 17 3.744660 AGGCCGGAAGCAATAATAAGAG 58.255 45.455 5.05 0.00 46.50 2.85
17 18 3.857157 AGGCCGGAAGCAATAATAAGA 57.143 42.857 5.05 0.00 46.50 2.10
18 19 4.003648 CCTAGGCCGGAAGCAATAATAAG 58.996 47.826 5.05 0.00 46.50 1.73
19 20 3.393278 ACCTAGGCCGGAAGCAATAATAA 59.607 43.478 9.30 0.00 46.50 1.40
20 21 2.976882 ACCTAGGCCGGAAGCAATAATA 59.023 45.455 9.30 0.00 46.50 0.98
21 22 1.774856 ACCTAGGCCGGAAGCAATAAT 59.225 47.619 9.30 0.00 46.50 1.28
22 23 1.209621 ACCTAGGCCGGAAGCAATAA 58.790 50.000 9.30 0.00 46.50 1.40
23 24 2.091098 TACCTAGGCCGGAAGCAATA 57.909 50.000 9.30 0.00 46.50 1.90
24 25 1.435256 ATACCTAGGCCGGAAGCAAT 58.565 50.000 9.30 0.00 46.50 3.56
25 26 2.091098 TATACCTAGGCCGGAAGCAA 57.909 50.000 9.30 0.00 46.50 3.91
26 27 2.320681 ATATACCTAGGCCGGAAGCA 57.679 50.000 9.30 0.00 46.50 3.91
27 28 3.697619 AAATATACCTAGGCCGGAAGC 57.302 47.619 9.30 0.00 42.60 3.86
28 29 9.901172 AATAATTAAATATACCTAGGCCGGAAG 57.099 33.333 9.30 0.00 0.00 3.46
30 31 9.675464 CAAATAATTAAATATACCTAGGCCGGA 57.325 33.333 9.30 0.00 0.00 5.14
31 32 8.403236 GCAAATAATTAAATATACCTAGGCCGG 58.597 37.037 9.30 0.00 0.00 6.13
32 33 8.403236 GGCAAATAATTAAATATACCTAGGCCG 58.597 37.037 9.30 0.00 0.00 6.13
33 34 8.692710 GGGCAAATAATTAAATATACCTAGGCC 58.307 37.037 9.30 0.00 0.00 5.19
34 35 9.250246 TGGGCAAATAATTAAATATACCTAGGC 57.750 33.333 9.30 0.00 0.00 3.93
45 46 9.535878 GGATAACGAAATGGGCAAATAATTAAA 57.464 29.630 0.00 0.00 0.00 1.52
46 47 8.696374 TGGATAACGAAATGGGCAAATAATTAA 58.304 29.630 0.00 0.00 0.00 1.40
47 48 8.138712 GTGGATAACGAAATGGGCAAATAATTA 58.861 33.333 0.00 0.00 0.00 1.40
48 49 6.983890 GTGGATAACGAAATGGGCAAATAATT 59.016 34.615 0.00 0.00 0.00 1.40
49 50 6.462347 GGTGGATAACGAAATGGGCAAATAAT 60.462 38.462 0.00 0.00 0.00 1.28
50 51 5.163499 GGTGGATAACGAAATGGGCAAATAA 60.163 40.000 0.00 0.00 0.00 1.40
51 52 4.339814 GGTGGATAACGAAATGGGCAAATA 59.660 41.667 0.00 0.00 0.00 1.40
52 53 3.132111 GGTGGATAACGAAATGGGCAAAT 59.868 43.478 0.00 0.00 0.00 2.32
53 54 2.494073 GGTGGATAACGAAATGGGCAAA 59.506 45.455 0.00 0.00 0.00 3.68
54 55 2.096248 GGTGGATAACGAAATGGGCAA 58.904 47.619 0.00 0.00 0.00 4.52
55 56 1.683629 GGGTGGATAACGAAATGGGCA 60.684 52.381 0.00 0.00 0.00 5.36
56 57 1.029681 GGGTGGATAACGAAATGGGC 58.970 55.000 0.00 0.00 0.00 5.36
57 58 2.172717 AGAGGGTGGATAACGAAATGGG 59.827 50.000 0.00 0.00 0.00 4.00
58 59 3.118408 TGAGAGGGTGGATAACGAAATGG 60.118 47.826 0.00 0.00 0.00 3.16
59 60 3.871594 GTGAGAGGGTGGATAACGAAATG 59.128 47.826 0.00 0.00 0.00 2.32
60 61 3.118371 GGTGAGAGGGTGGATAACGAAAT 60.118 47.826 0.00 0.00 0.00 2.17
61 62 2.235402 GGTGAGAGGGTGGATAACGAAA 59.765 50.000 0.00 0.00 0.00 3.46
62 63 1.829222 GGTGAGAGGGTGGATAACGAA 59.171 52.381 0.00 0.00 0.00 3.85
63 64 1.481871 GGTGAGAGGGTGGATAACGA 58.518 55.000 0.00 0.00 0.00 3.85
64 65 0.464452 GGGTGAGAGGGTGGATAACG 59.536 60.000 0.00 0.00 0.00 3.18
65 66 1.580059 TGGGTGAGAGGGTGGATAAC 58.420 55.000 0.00 0.00 0.00 1.89
66 67 2.352561 TTGGGTGAGAGGGTGGATAA 57.647 50.000 0.00 0.00 0.00 1.75
67 68 2.352561 TTTGGGTGAGAGGGTGGATA 57.647 50.000 0.00 0.00 0.00 2.59
68 69 1.566231 GATTTGGGTGAGAGGGTGGAT 59.434 52.381 0.00 0.00 0.00 3.41
69 70 0.991920 GATTTGGGTGAGAGGGTGGA 59.008 55.000 0.00 0.00 0.00 4.02
70 71 0.995024 AGATTTGGGTGAGAGGGTGG 59.005 55.000 0.00 0.00 0.00 4.61
71 72 3.107601 TCTAGATTTGGGTGAGAGGGTG 58.892 50.000 0.00 0.00 0.00 4.61
72 73 3.012959 TCTCTAGATTTGGGTGAGAGGGT 59.987 47.826 0.00 0.00 35.41 4.34
73 74 3.640967 CTCTCTAGATTTGGGTGAGAGGG 59.359 52.174 9.64 0.00 43.94 4.30
74 75 4.541705 TCTCTCTAGATTTGGGTGAGAGG 58.458 47.826 15.41 1.69 46.20 3.69
76 77 5.192722 TCTCTCTCTCTAGATTTGGGTGAGA 59.807 44.000 7.63 7.63 33.45 3.27
77 78 5.445069 TCTCTCTCTCTAGATTTGGGTGAG 58.555 45.833 0.00 0.00 0.00 3.51
78 79 5.192722 TCTCTCTCTCTCTAGATTTGGGTGA 59.807 44.000 0.00 0.00 0.00 4.02
79 80 5.445069 TCTCTCTCTCTCTAGATTTGGGTG 58.555 45.833 0.00 0.00 0.00 4.61
80 81 5.399038 CCTCTCTCTCTCTCTAGATTTGGGT 60.399 48.000 0.00 0.00 0.00 4.51
81 82 5.072741 CCTCTCTCTCTCTCTAGATTTGGG 58.927 50.000 0.00 0.00 0.00 4.12
82 83 5.072741 CCCTCTCTCTCTCTCTAGATTTGG 58.927 50.000 0.00 0.00 0.00 3.28
83 84 5.694995 ACCCTCTCTCTCTCTCTAGATTTG 58.305 45.833 0.00 0.00 0.00 2.32
84 85 5.431731 TGACCCTCTCTCTCTCTCTAGATTT 59.568 44.000 0.00 0.00 0.00 2.17
85 86 4.975147 TGACCCTCTCTCTCTCTCTAGATT 59.025 45.833 0.00 0.00 0.00 2.40
86 87 4.348168 GTGACCCTCTCTCTCTCTCTAGAT 59.652 50.000 0.00 0.00 0.00 1.98
87 88 3.709653 GTGACCCTCTCTCTCTCTCTAGA 59.290 52.174 0.00 0.00 0.00 2.43
88 89 3.181454 GGTGACCCTCTCTCTCTCTCTAG 60.181 56.522 0.00 0.00 0.00 2.43
89 90 2.775384 GGTGACCCTCTCTCTCTCTCTA 59.225 54.545 0.00 0.00 0.00 2.43
90 91 1.564348 GGTGACCCTCTCTCTCTCTCT 59.436 57.143 0.00 0.00 0.00 3.10
91 92 1.745827 CGGTGACCCTCTCTCTCTCTC 60.746 61.905 0.00 0.00 0.00 3.20
92 93 0.254747 CGGTGACCCTCTCTCTCTCT 59.745 60.000 0.00 0.00 0.00 3.10
93 94 0.750182 CCGGTGACCCTCTCTCTCTC 60.750 65.000 0.00 0.00 0.00 3.20
94 95 1.304952 CCGGTGACCCTCTCTCTCT 59.695 63.158 0.00 0.00 0.00 3.10
95 96 2.419739 GCCGGTGACCCTCTCTCTC 61.420 68.421 1.90 0.00 0.00 3.20
96 97 2.363147 GCCGGTGACCCTCTCTCT 60.363 66.667 1.90 0.00 0.00 3.10
97 98 3.827898 CGCCGGTGACCCTCTCTC 61.828 72.222 10.20 0.00 0.00 3.20
98 99 4.361971 TCGCCGGTGACCCTCTCT 62.362 66.667 15.21 0.00 0.00 3.10
99 100 4.131088 GTCGCCGGTGACCCTCTC 62.131 72.222 33.39 10.99 32.61 3.20
104 105 4.353437 AACTCGTCGCCGGTGACC 62.353 66.667 35.81 21.30 35.40 4.02
105 106 3.103911 CAACTCGTCGCCGGTGAC 61.104 66.667 33.54 33.54 35.49 3.67
106 107 3.289062 TCAACTCGTCGCCGGTGA 61.289 61.111 15.21 15.21 33.95 4.02
107 108 3.103911 GTCAACTCGTCGCCGGTG 61.104 66.667 9.28 9.28 33.95 4.94
108 109 4.695231 CGTCAACTCGTCGCCGGT 62.695 66.667 1.90 0.00 33.95 5.28
109 110 4.394078 TCGTCAACTCGTCGCCGG 62.394 66.667 0.00 0.00 33.95 6.13
110 111 2.870161 CTCGTCAACTCGTCGCCG 60.870 66.667 0.00 0.00 0.00 6.46
111 112 3.173240 GCTCGTCAACTCGTCGCC 61.173 66.667 0.00 0.00 0.00 5.54
112 113 2.126812 AGCTCGTCAACTCGTCGC 60.127 61.111 0.00 0.00 0.00 5.19
113 114 4.044024 GAGCTCGTCAACTCGTCG 57.956 61.111 0.00 0.00 0.00 5.12
129 130 1.740332 TTGTTGACTCGCCTCCACGA 61.740 55.000 0.00 0.00 40.36 4.35
130 131 1.300620 TTGTTGACTCGCCTCCACG 60.301 57.895 0.00 0.00 0.00 4.94
131 132 0.531974 TGTTGTTGACTCGCCTCCAC 60.532 55.000 0.00 0.00 0.00 4.02
132 133 0.249868 CTGTTGTTGACTCGCCTCCA 60.250 55.000 0.00 0.00 0.00 3.86
133 134 0.033504 TCTGTTGTTGACTCGCCTCC 59.966 55.000 0.00 0.00 0.00 4.30
134 135 1.000163 TCTCTGTTGTTGACTCGCCTC 60.000 52.381 0.00 0.00 0.00 4.70
135 136 1.040646 TCTCTGTTGTTGACTCGCCT 58.959 50.000 0.00 0.00 0.00 5.52
136 137 1.865865 TTCTCTGTTGTTGACTCGCC 58.134 50.000 0.00 0.00 0.00 5.54
137 138 4.474226 AAATTCTCTGTTGTTGACTCGC 57.526 40.909 0.00 0.00 0.00 5.03
138 139 5.120830 CCCTAAATTCTCTGTTGTTGACTCG 59.879 44.000 0.00 0.00 0.00 4.18
139 140 5.998363 ACCCTAAATTCTCTGTTGTTGACTC 59.002 40.000 0.00 0.00 0.00 3.36
140 141 5.941788 ACCCTAAATTCTCTGTTGTTGACT 58.058 37.500 0.00 0.00 0.00 3.41
141 142 6.262273 TGAACCCTAAATTCTCTGTTGTTGAC 59.738 38.462 0.00 0.00 0.00 3.18
142 143 6.262273 GTGAACCCTAAATTCTCTGTTGTTGA 59.738 38.462 0.00 0.00 0.00 3.18
143 144 6.039270 TGTGAACCCTAAATTCTCTGTTGTTG 59.961 38.462 0.00 0.00 0.00 3.33
144 145 6.126409 TGTGAACCCTAAATTCTCTGTTGTT 58.874 36.000 0.00 0.00 0.00 2.83
145 146 5.690865 TGTGAACCCTAAATTCTCTGTTGT 58.309 37.500 0.00 0.00 0.00 3.32
146 147 6.824305 ATGTGAACCCTAAATTCTCTGTTG 57.176 37.500 0.00 0.00 0.00 3.33
147 148 9.533831 AATAATGTGAACCCTAAATTCTCTGTT 57.466 29.630 0.00 0.00 0.00 3.16
148 149 9.533831 AAATAATGTGAACCCTAAATTCTCTGT 57.466 29.630 0.00 0.00 0.00 3.41
153 154 9.366216 GGTCAAAATAATGTGAACCCTAAATTC 57.634 33.333 0.00 0.00 0.00 2.17
154 155 8.032451 CGGTCAAAATAATGTGAACCCTAAATT 58.968 33.333 0.00 0.00 0.00 1.82
155 156 7.394923 TCGGTCAAAATAATGTGAACCCTAAAT 59.605 33.333 0.00 0.00 0.00 1.40
156 157 6.715718 TCGGTCAAAATAATGTGAACCCTAAA 59.284 34.615 0.00 0.00 0.00 1.85
157 158 6.239396 TCGGTCAAAATAATGTGAACCCTAA 58.761 36.000 0.00 0.00 0.00 2.69
158 159 5.806818 TCGGTCAAAATAATGTGAACCCTA 58.193 37.500 0.00 0.00 0.00 3.53
159 160 4.658063 TCGGTCAAAATAATGTGAACCCT 58.342 39.130 0.00 0.00 0.00 4.34
160 161 5.379732 TTCGGTCAAAATAATGTGAACCC 57.620 39.130 0.00 0.00 0.00 4.11
161 162 7.701809 TTTTTCGGTCAAAATAATGTGAACC 57.298 32.000 0.00 0.00 33.82 3.62
162 163 9.579610 CAATTTTTCGGTCAAAATAATGTGAAC 57.420 29.630 2.58 0.00 35.67 3.18
163 164 9.319143 ACAATTTTTCGGTCAAAATAATGTGAA 57.681 25.926 2.58 0.00 35.67 3.18
164 165 8.879342 ACAATTTTTCGGTCAAAATAATGTGA 57.121 26.923 2.58 0.00 35.67 3.58
165 166 8.977505 AGACAATTTTTCGGTCAAAATAATGTG 58.022 29.630 8.90 4.63 35.67 3.21
166 167 9.541143 AAGACAATTTTTCGGTCAAAATAATGT 57.459 25.926 0.00 4.40 35.67 2.71
192 193 6.998802 TCACCCTTTGACTTCTTTTCAAAAA 58.001 32.000 0.00 0.00 41.32 1.94
193 194 6.597832 TCACCCTTTGACTTCTTTTCAAAA 57.402 33.333 0.00 0.00 41.32 2.44
194 195 6.790232 ATCACCCTTTGACTTCTTTTCAAA 57.210 33.333 0.00 0.00 39.99 2.69
195 196 6.790232 AATCACCCTTTGACTTCTTTTCAA 57.210 33.333 0.00 0.00 36.92 2.69
196 197 6.790232 AAATCACCCTTTGACTTCTTTTCA 57.210 33.333 0.00 0.00 36.92 2.69
197 198 9.764363 AATAAAATCACCCTTTGACTTCTTTTC 57.236 29.630 0.00 0.00 36.92 2.29
200 201 9.764363 GAAAATAAAATCACCCTTTGACTTCTT 57.236 29.630 0.00 0.00 36.92 2.52
201 202 8.082242 CGAAAATAAAATCACCCTTTGACTTCT 58.918 33.333 0.00 0.00 36.92 2.85
202 203 7.865889 ACGAAAATAAAATCACCCTTTGACTTC 59.134 33.333 0.00 0.00 36.92 3.01
203 204 7.651704 CACGAAAATAAAATCACCCTTTGACTT 59.348 33.333 0.00 0.00 36.92 3.01
204 205 7.013846 TCACGAAAATAAAATCACCCTTTGACT 59.986 33.333 0.00 0.00 36.92 3.41
205 206 7.142680 TCACGAAAATAAAATCACCCTTTGAC 58.857 34.615 0.00 0.00 36.92 3.18
206 207 7.278461 TCACGAAAATAAAATCACCCTTTGA 57.722 32.000 0.00 0.00 39.11 2.69
207 208 8.532977 AATCACGAAAATAAAATCACCCTTTG 57.467 30.769 0.00 0.00 0.00 2.77
208 209 9.554395 AAAATCACGAAAATAAAATCACCCTTT 57.446 25.926 0.00 0.00 0.00 3.11
209 210 9.554395 AAAAATCACGAAAATAAAATCACCCTT 57.446 25.926 0.00 0.00 0.00 3.95
233 234 9.959749 GACCTTTTATTGTACATGTGAGAAAAA 57.040 29.630 9.11 7.93 0.00 1.94
234 235 9.126151 TGACCTTTTATTGTACATGTGAGAAAA 57.874 29.630 9.11 9.29 0.00 2.29
235 236 8.684386 TGACCTTTTATTGTACATGTGAGAAA 57.316 30.769 9.11 1.75 0.00 2.52
236 237 8.684386 TTGACCTTTTATTGTACATGTGAGAA 57.316 30.769 9.11 0.00 0.00 2.87
237 238 7.936847 ACTTGACCTTTTATTGTACATGTGAGA 59.063 33.333 9.11 0.00 0.00 3.27
238 239 8.099364 ACTTGACCTTTTATTGTACATGTGAG 57.901 34.615 9.11 0.00 0.00 3.51
239 240 8.458573 AACTTGACCTTTTATTGTACATGTGA 57.541 30.769 9.11 0.00 0.00 3.58
298 299 9.435688 AAAGAAGTTAGCAATTCAACAAAAAGT 57.564 25.926 0.00 0.00 0.00 2.66
302 303 8.878769 GGAAAAAGAAGTTAGCAATTCAACAAA 58.121 29.630 0.00 0.00 0.00 2.83
303 304 8.037758 TGGAAAAAGAAGTTAGCAATTCAACAA 58.962 29.630 0.00 0.00 0.00 2.83
304 305 7.551585 TGGAAAAAGAAGTTAGCAATTCAACA 58.448 30.769 0.00 0.00 0.00 3.33
305 306 8.593492 ATGGAAAAAGAAGTTAGCAATTCAAC 57.407 30.769 0.00 0.00 0.00 3.18
306 307 9.612066 AAATGGAAAAAGAAGTTAGCAATTCAA 57.388 25.926 0.00 0.00 0.00 2.69
309 310 9.710900 CCTAAATGGAAAAAGAAGTTAGCAATT 57.289 29.630 0.00 0.00 38.35 2.32
310 311 8.314021 CCCTAAATGGAAAAAGAAGTTAGCAAT 58.686 33.333 0.00 0.00 38.35 3.56
311 312 7.289084 ACCCTAAATGGAAAAAGAAGTTAGCAA 59.711 33.333 0.00 0.00 38.35 3.91
312 313 6.780522 ACCCTAAATGGAAAAAGAAGTTAGCA 59.219 34.615 0.00 0.00 38.35 3.49
313 314 7.090808 CACCCTAAATGGAAAAAGAAGTTAGC 58.909 38.462 0.00 0.00 38.35 3.09
314 315 8.178313 ACACCCTAAATGGAAAAAGAAGTTAG 57.822 34.615 0.00 0.00 38.35 2.34
315 316 9.816787 ATACACCCTAAATGGAAAAAGAAGTTA 57.183 29.630 0.00 0.00 38.35 2.24
316 317 8.721133 ATACACCCTAAATGGAAAAAGAAGTT 57.279 30.769 0.00 0.00 38.35 2.66
317 318 9.990868 ATATACACCCTAAATGGAAAAAGAAGT 57.009 29.630 0.00 0.00 38.35 3.01
337 338 5.627272 CGTTTGGTTCCTGGGTGTATATACA 60.627 44.000 11.62 11.62 0.00 2.29
338 339 4.812626 CGTTTGGTTCCTGGGTGTATATAC 59.187 45.833 5.89 5.89 0.00 1.47
339 340 4.470664 ACGTTTGGTTCCTGGGTGTATATA 59.529 41.667 0.00 0.00 0.00 0.86
340 341 3.264964 ACGTTTGGTTCCTGGGTGTATAT 59.735 43.478 0.00 0.00 0.00 0.86
341 342 2.638855 ACGTTTGGTTCCTGGGTGTATA 59.361 45.455 0.00 0.00 0.00 1.47
342 343 1.422402 ACGTTTGGTTCCTGGGTGTAT 59.578 47.619 0.00 0.00 0.00 2.29
343 344 0.838608 ACGTTTGGTTCCTGGGTGTA 59.161 50.000 0.00 0.00 0.00 2.90
344 345 0.033894 AACGTTTGGTTCCTGGGTGT 60.034 50.000 0.00 0.00 31.79 4.16
345 346 2.801859 AACGTTTGGTTCCTGGGTG 58.198 52.632 0.00 0.00 31.79 4.61
369 370 4.729918 GAGCTGGGGTGGTGCAGG 62.730 72.222 0.00 0.00 0.00 4.85
370 371 3.201707 AAGAGCTGGGGTGGTGCAG 62.202 63.158 0.00 0.00 0.00 4.41
395 396 1.556911 GAGACTTTGAGATGGCCTGGA 59.443 52.381 3.32 0.00 0.00 3.86
486 487 9.503427 CCTATCGAAAGTTTATTGGAAAATGAC 57.497 33.333 0.00 0.00 0.00 3.06
495 496 6.753107 AACCACCCTATCGAAAGTTTATTG 57.247 37.500 0.00 0.00 0.00 1.90
574 580 9.686683 GCCCCTGAATCATATACTACAATTATT 57.313 33.333 0.00 0.00 0.00 1.40
575 581 9.062367 AGCCCCTGAATCATATACTACAATTAT 57.938 33.333 0.00 0.00 0.00 1.28
576 582 8.449423 AGCCCCTGAATCATATACTACAATTA 57.551 34.615 0.00 0.00 0.00 1.40
577 583 7.335127 AGCCCCTGAATCATATACTACAATT 57.665 36.000 0.00 0.00 0.00 2.32
578 584 6.959606 AGCCCCTGAATCATATACTACAAT 57.040 37.500 0.00 0.00 0.00 2.71
579 585 6.763715 AAGCCCCTGAATCATATACTACAA 57.236 37.500 0.00 0.00 0.00 2.41
580 586 6.533730 CAAAGCCCCTGAATCATATACTACA 58.466 40.000 0.00 0.00 0.00 2.74
581 587 5.412904 GCAAAGCCCCTGAATCATATACTAC 59.587 44.000 0.00 0.00 0.00 2.73
582 588 5.310594 AGCAAAGCCCCTGAATCATATACTA 59.689 40.000 0.00 0.00 0.00 1.82
583 589 4.105377 AGCAAAGCCCCTGAATCATATACT 59.895 41.667 0.00 0.00 0.00 2.12
584 590 4.401925 AGCAAAGCCCCTGAATCATATAC 58.598 43.478 0.00 0.00 0.00 1.47
585 591 4.729552 AGCAAAGCCCCTGAATCATATA 57.270 40.909 0.00 0.00 0.00 0.86
586 592 3.607490 AGCAAAGCCCCTGAATCATAT 57.393 42.857 0.00 0.00 0.00 1.78
587 593 3.201930 TGTAGCAAAGCCCCTGAATCATA 59.798 43.478 0.00 0.00 0.00 2.15
588 594 2.025037 TGTAGCAAAGCCCCTGAATCAT 60.025 45.455 0.00 0.00 0.00 2.45
589 595 1.354031 TGTAGCAAAGCCCCTGAATCA 59.646 47.619 0.00 0.00 0.00 2.57
590 596 2.128771 TGTAGCAAAGCCCCTGAATC 57.871 50.000 0.00 0.00 0.00 2.52
591 597 2.243221 AGATGTAGCAAAGCCCCTGAAT 59.757 45.455 0.00 0.00 0.00 2.57
592 598 1.635487 AGATGTAGCAAAGCCCCTGAA 59.365 47.619 0.00 0.00 0.00 3.02
593 599 1.289160 AGATGTAGCAAAGCCCCTGA 58.711 50.000 0.00 0.00 0.00 3.86
594 600 2.092968 TGTAGATGTAGCAAAGCCCCTG 60.093 50.000 0.00 0.00 0.00 4.45
595 601 2.171448 CTGTAGATGTAGCAAAGCCCCT 59.829 50.000 0.00 0.00 0.00 4.79
596 602 2.565841 CTGTAGATGTAGCAAAGCCCC 58.434 52.381 0.00 0.00 0.00 5.80
597 603 2.565841 CCTGTAGATGTAGCAAAGCCC 58.434 52.381 0.00 0.00 0.00 5.19
598 604 1.943340 GCCTGTAGATGTAGCAAAGCC 59.057 52.381 0.00 0.00 0.00 4.35
599 605 2.632377 TGCCTGTAGATGTAGCAAAGC 58.368 47.619 0.00 0.00 0.00 3.51
600 606 5.824904 AATTGCCTGTAGATGTAGCAAAG 57.175 39.130 0.00 0.00 45.61 2.77
601 607 5.293324 CGTAATTGCCTGTAGATGTAGCAAA 59.707 40.000 0.00 0.00 45.61 3.68
602 608 4.808895 CGTAATTGCCTGTAGATGTAGCAA 59.191 41.667 0.00 0.00 46.43 3.91
603 609 4.368315 CGTAATTGCCTGTAGATGTAGCA 58.632 43.478 0.00 0.00 0.00 3.49
604 610 3.741344 CCGTAATTGCCTGTAGATGTAGC 59.259 47.826 0.00 0.00 0.00 3.58
605 611 4.307432 CCCGTAATTGCCTGTAGATGTAG 58.693 47.826 0.00 0.00 0.00 2.74
606 612 3.070446 CCCCGTAATTGCCTGTAGATGTA 59.930 47.826 0.00 0.00 0.00 2.29
607 613 2.158813 CCCCGTAATTGCCTGTAGATGT 60.159 50.000 0.00 0.00 0.00 3.06
608 614 2.158813 ACCCCGTAATTGCCTGTAGATG 60.159 50.000 0.00 0.00 0.00 2.90
609 615 2.124411 ACCCCGTAATTGCCTGTAGAT 58.876 47.619 0.00 0.00 0.00 1.98
610 616 1.208535 CACCCCGTAATTGCCTGTAGA 59.791 52.381 0.00 0.00 0.00 2.59
611 617 1.663695 CACCCCGTAATTGCCTGTAG 58.336 55.000 0.00 0.00 0.00 2.74
612 618 0.253610 CCACCCCGTAATTGCCTGTA 59.746 55.000 0.00 0.00 0.00 2.74
613 619 1.001393 CCACCCCGTAATTGCCTGT 60.001 57.895 0.00 0.00 0.00 4.00
614 620 1.752694 CCCACCCCGTAATTGCCTG 60.753 63.158 0.00 0.00 0.00 4.85
615 621 1.502527 TTCCCACCCCGTAATTGCCT 61.503 55.000 0.00 0.00 0.00 4.75
616 622 1.000646 TTCCCACCCCGTAATTGCC 60.001 57.895 0.00 0.00 0.00 4.52
617 623 0.323087 ACTTCCCACCCCGTAATTGC 60.323 55.000 0.00 0.00 0.00 3.56
618 624 2.209690 AACTTCCCACCCCGTAATTG 57.790 50.000 0.00 0.00 0.00 2.32
619 625 2.984435 AAACTTCCCACCCCGTAATT 57.016 45.000 0.00 0.00 0.00 1.40
620 626 2.984435 AAAACTTCCCACCCCGTAAT 57.016 45.000 0.00 0.00 0.00 1.89
621 627 2.441001 TGTAAAACTTCCCACCCCGTAA 59.559 45.455 0.00 0.00 0.00 3.18
622 628 2.038820 CTGTAAAACTTCCCACCCCGTA 59.961 50.000 0.00 0.00 0.00 4.02
623 629 0.845337 TGTAAAACTTCCCACCCCGT 59.155 50.000 0.00 0.00 0.00 5.28
624 630 1.530323 CTGTAAAACTTCCCACCCCG 58.470 55.000 0.00 0.00 0.00 5.73
625 631 1.549265 CCCTGTAAAACTTCCCACCCC 60.549 57.143 0.00 0.00 0.00 4.95
626 632 1.146359 ACCCTGTAAAACTTCCCACCC 59.854 52.381 0.00 0.00 0.00 4.61
627 633 2.158579 TCACCCTGTAAAACTTCCCACC 60.159 50.000 0.00 0.00 0.00 4.61
628 634 2.882761 GTCACCCTGTAAAACTTCCCAC 59.117 50.000 0.00 0.00 0.00 4.61
629 635 2.781174 AGTCACCCTGTAAAACTTCCCA 59.219 45.455 0.00 0.00 0.00 4.37
630 636 3.503800 AGTCACCCTGTAAAACTTCCC 57.496 47.619 0.00 0.00 0.00 3.97
631 637 4.041321 ACCTAGTCACCCTGTAAAACTTCC 59.959 45.833 0.00 0.00 0.00 3.46
632 638 5.224821 ACCTAGTCACCCTGTAAAACTTC 57.775 43.478 0.00 0.00 0.00 3.01
633 639 5.842874 ACTACCTAGTCACCCTGTAAAACTT 59.157 40.000 0.00 0.00 0.00 2.66
634 640 5.400870 ACTACCTAGTCACCCTGTAAAACT 58.599 41.667 0.00 0.00 0.00 2.66
635 641 5.735285 ACTACCTAGTCACCCTGTAAAAC 57.265 43.478 0.00 0.00 0.00 2.43
636 642 6.752285 AAACTACCTAGTCACCCTGTAAAA 57.248 37.500 0.00 0.00 34.99 1.52
637 643 6.752285 AAAACTACCTAGTCACCCTGTAAA 57.248 37.500 0.00 0.00 34.99 2.01
638 644 6.752285 AAAAACTACCTAGTCACCCTGTAA 57.248 37.500 0.00 0.00 34.99 2.41
639 645 7.854166 TTAAAAACTACCTAGTCACCCTGTA 57.146 36.000 0.00 0.00 34.99 2.74
640 646 6.752285 TTAAAAACTACCTAGTCACCCTGT 57.248 37.500 0.00 0.00 34.99 4.00
641 647 9.379791 CTAATTAAAAACTACCTAGTCACCCTG 57.620 37.037 0.00 0.00 34.99 4.45
642 648 9.109246 ACTAATTAAAAACTACCTAGTCACCCT 57.891 33.333 0.00 0.00 34.99 4.34
643 649 9.730705 AACTAATTAAAAACTACCTAGTCACCC 57.269 33.333 0.00 0.00 34.99 4.61
655 661 9.809395 AGGCTCCTTCTAAACTAATTAAAAACT 57.191 29.630 0.00 0.00 0.00 2.66
656 662 9.841880 CAGGCTCCTTCTAAACTAATTAAAAAC 57.158 33.333 0.00 0.00 0.00 2.43
657 663 9.582648 ACAGGCTCCTTCTAAACTAATTAAAAA 57.417 29.630 0.00 0.00 0.00 1.94
662 668 9.178758 CAATTACAGGCTCCTTCTAAACTAATT 57.821 33.333 0.00 0.00 0.00 1.40
663 669 7.283354 GCAATTACAGGCTCCTTCTAAACTAAT 59.717 37.037 0.00 0.00 0.00 1.73
664 670 6.598064 GCAATTACAGGCTCCTTCTAAACTAA 59.402 38.462 0.00 0.00 0.00 2.24
665 671 6.113411 GCAATTACAGGCTCCTTCTAAACTA 58.887 40.000 0.00 0.00 0.00 2.24
666 672 4.944317 GCAATTACAGGCTCCTTCTAAACT 59.056 41.667 0.00 0.00 0.00 2.66
667 673 4.096532 GGCAATTACAGGCTCCTTCTAAAC 59.903 45.833 0.00 0.00 0.00 2.01
668 674 4.018415 AGGCAATTACAGGCTCCTTCTAAA 60.018 41.667 0.00 0.00 37.29 1.85
669 675 3.523564 AGGCAATTACAGGCTCCTTCTAA 59.476 43.478 0.00 0.00 37.29 2.10
670 676 3.115390 AGGCAATTACAGGCTCCTTCTA 58.885 45.455 0.00 0.00 37.29 2.10
671 677 1.918957 AGGCAATTACAGGCTCCTTCT 59.081 47.619 0.00 0.00 37.29 2.85
672 678 2.019984 CAGGCAATTACAGGCTCCTTC 58.980 52.381 0.00 0.00 40.22 3.46
673 679 1.355720 ACAGGCAATTACAGGCTCCTT 59.644 47.619 0.00 0.00 40.22 3.36
674 680 0.995024 ACAGGCAATTACAGGCTCCT 59.005 50.000 0.00 0.00 40.22 3.69
675 681 2.710096 TACAGGCAATTACAGGCTCC 57.290 50.000 0.00 0.00 40.22 4.70
676 682 3.873910 TCTTACAGGCAATTACAGGCTC 58.126 45.455 0.00 0.00 40.22 4.70
677 683 4.455606 GATCTTACAGGCAATTACAGGCT 58.544 43.478 0.00 0.00 43.32 4.58
678 684 3.565902 GGATCTTACAGGCAATTACAGGC 59.434 47.826 0.00 0.00 0.00 4.85
679 685 5.041191 AGGATCTTACAGGCAATTACAGG 57.959 43.478 0.00 0.00 0.00 4.00
680 686 9.376075 CATATAGGATCTTACAGGCAATTACAG 57.624 37.037 0.00 0.00 0.00 2.74
681 687 8.880244 ACATATAGGATCTTACAGGCAATTACA 58.120 33.333 0.00 0.00 0.00 2.41
682 688 9.372369 GACATATAGGATCTTACAGGCAATTAC 57.628 37.037 0.00 0.00 0.00 1.89
683 689 9.326489 AGACATATAGGATCTTACAGGCAATTA 57.674 33.333 0.00 0.00 0.00 1.40
684 690 8.212259 AGACATATAGGATCTTACAGGCAATT 57.788 34.615 0.00 0.00 0.00 2.32
685 691 7.805083 AGACATATAGGATCTTACAGGCAAT 57.195 36.000 0.00 0.00 0.00 3.56
686 692 7.093727 GCTAGACATATAGGATCTTACAGGCAA 60.094 40.741 0.00 0.00 0.00 4.52
687 693 6.378564 GCTAGACATATAGGATCTTACAGGCA 59.621 42.308 0.00 0.00 0.00 4.75
688 694 6.378564 TGCTAGACATATAGGATCTTACAGGC 59.621 42.308 0.00 0.00 0.00 4.85
689 695 7.946381 TGCTAGACATATAGGATCTTACAGG 57.054 40.000 0.00 0.00 0.00 4.00
703 709 9.399797 ACTGAATCATCAAAAATGCTAGACATA 57.600 29.630 0.00 0.00 34.48 2.29
704 710 8.289939 ACTGAATCATCAAAAATGCTAGACAT 57.710 30.769 0.00 0.00 36.26 3.06
705 711 7.609146 AGACTGAATCATCAAAAATGCTAGACA 59.391 33.333 0.00 0.00 34.49 3.41
706 712 7.983307 AGACTGAATCATCAAAAATGCTAGAC 58.017 34.615 0.00 0.00 34.49 2.59
707 713 8.571461 AAGACTGAATCATCAAAAATGCTAGA 57.429 30.769 0.00 0.00 34.49 2.43
710 716 9.798994 GATTAAGACTGAATCATCAAAAATGCT 57.201 29.630 7.58 0.00 34.49 3.79
711 717 8.740369 CGATTAAGACTGAATCATCAAAAATGC 58.260 33.333 12.28 0.00 34.49 3.56
712 718 9.229784 CCGATTAAGACTGAATCATCAAAAATG 57.770 33.333 12.28 0.00 34.49 2.32
713 719 8.960591 ACCGATTAAGACTGAATCATCAAAAAT 58.039 29.630 12.28 0.00 34.49 1.82
714 720 8.236586 CACCGATTAAGACTGAATCATCAAAAA 58.763 33.333 12.28 0.00 34.49 1.94
715 721 7.148255 CCACCGATTAAGACTGAATCATCAAAA 60.148 37.037 12.28 0.00 34.49 2.44
716 722 6.316140 CCACCGATTAAGACTGAATCATCAAA 59.684 38.462 12.28 0.00 34.49 2.69
717 723 5.817296 CCACCGATTAAGACTGAATCATCAA 59.183 40.000 12.28 0.00 34.49 2.57
718 724 5.104941 ACCACCGATTAAGACTGAATCATCA 60.105 40.000 12.28 0.00 33.66 3.07
719 725 5.360591 ACCACCGATTAAGACTGAATCATC 58.639 41.667 12.28 0.00 33.66 2.92
720 726 5.359194 ACCACCGATTAAGACTGAATCAT 57.641 39.130 12.28 0.00 33.66 2.45
721 727 4.819105 ACCACCGATTAAGACTGAATCA 57.181 40.909 12.28 0.00 33.66 2.57
722 728 6.496338 AAAACCACCGATTAAGACTGAATC 57.504 37.500 2.67 2.67 0.00 2.52
723 729 6.677913 CAAAAACCACCGATTAAGACTGAAT 58.322 36.000 0.00 0.00 0.00 2.57
724 730 5.506649 GCAAAAACCACCGATTAAGACTGAA 60.507 40.000 0.00 0.00 0.00 3.02
725 731 4.023536 GCAAAAACCACCGATTAAGACTGA 60.024 41.667 0.00 0.00 0.00 3.41
726 732 4.226761 GCAAAAACCACCGATTAAGACTG 58.773 43.478 0.00 0.00 0.00 3.51
727 733 3.254903 GGCAAAAACCACCGATTAAGACT 59.745 43.478 0.00 0.00 0.00 3.24
728 734 3.571571 GGCAAAAACCACCGATTAAGAC 58.428 45.455 0.00 0.00 0.00 3.01
729 735 3.926821 GGCAAAAACCACCGATTAAGA 57.073 42.857 0.00 0.00 0.00 2.10
737 743 1.660264 CGAAGCGGCAAAAACCACC 60.660 57.895 1.45 0.00 0.00 4.61
738 744 3.916439 CGAAGCGGCAAAAACCAC 58.084 55.556 1.45 0.00 0.00 4.16
754 760 2.020131 CTGGCTCTGGCTTTATGCG 58.980 57.895 0.00 0.00 44.05 4.73
859 865 5.234329 CACTTGGTATTAGTGATAGCGTTGG 59.766 44.000 0.00 0.00 44.52 3.77
904 915 7.492669 CGGATAGAGATAACATGCGGATTAATT 59.507 37.037 0.00 0.00 30.93 1.40
921 932 3.133691 GTTGATGCAATGCGGATAGAGA 58.866 45.455 0.00 0.00 0.00 3.10
965 976 3.888930 GAGAAATGAGATCTCCGGACTCT 59.111 47.826 20.03 14.86 37.86 3.24
966 977 3.304391 CGAGAAATGAGATCTCCGGACTC 60.304 52.174 20.03 19.10 40.16 3.36
967 978 2.621055 CGAGAAATGAGATCTCCGGACT 59.379 50.000 20.03 13.45 40.16 3.85
968 979 2.619177 TCGAGAAATGAGATCTCCGGAC 59.381 50.000 20.03 9.19 40.16 4.79
969 980 2.932261 TCGAGAAATGAGATCTCCGGA 58.068 47.619 20.03 2.93 40.16 5.14
970 981 3.551863 CCTTCGAGAAATGAGATCTCCGG 60.552 52.174 20.03 0.00 40.16 5.14
971 982 3.637432 CCTTCGAGAAATGAGATCTCCG 58.363 50.000 20.03 14.28 40.16 4.63
1101 1112 0.243095 AGTACTCCTTGTCGCCGAAC 59.757 55.000 0.00 0.00 0.00 3.95
1110 1121 1.805945 GCGCCACGAGTACTCCTTG 60.806 63.158 17.23 13.63 0.00 3.61
1350 1361 1.716172 GGCGAAGAACTGCGATTCC 59.284 57.895 6.37 0.00 0.00 3.01
1353 1364 1.805945 GACGGCGAAGAACTGCGAT 60.806 57.895 16.62 0.00 0.00 4.58
1632 1667 4.087892 ATCTCGTTGCCCAGCGCT 62.088 61.111 2.64 2.64 38.78 5.92
1640 1675 1.878522 ATCGTCGGCATCTCGTTGC 60.879 57.895 0.00 0.19 42.01 4.17
1665 1700 2.288025 GGGCACGGTCCAGAGGTAA 61.288 63.158 0.00 0.00 0.00 2.85
1734 1769 4.025858 ATGCAGACGCTGGTGCCT 62.026 61.111 8.57 0.00 39.04 4.75
2118 2162 1.293179 CACACTCTCCATGGTCGCA 59.707 57.895 12.58 0.00 0.00 5.10
2310 2357 1.205655 CCGCCCGATATGATGATGTCT 59.794 52.381 0.00 0.00 0.00 3.41
2472 2519 2.578786 TCGATTATGTCAGCCTCCGTA 58.421 47.619 0.00 0.00 0.00 4.02
2487 2534 1.369625 GTGTCCGGCAGAATTCGATT 58.630 50.000 0.00 0.00 0.00 3.34
2716 2775 8.170730 TGAGTTCTAGATACTCCCAGCAATATA 58.829 37.037 21.88 6.52 41.02 0.86
2717 2776 7.013220 TGAGTTCTAGATACTCCCAGCAATAT 58.987 38.462 21.88 0.00 41.02 1.28
2718 2777 6.373759 TGAGTTCTAGATACTCCCAGCAATA 58.626 40.000 21.88 7.47 41.02 1.90
2719 2778 5.211973 TGAGTTCTAGATACTCCCAGCAAT 58.788 41.667 21.88 0.00 41.02 3.56
2720 2779 4.610333 TGAGTTCTAGATACTCCCAGCAA 58.390 43.478 21.88 8.42 41.02 3.91
2721 2780 4.251103 TGAGTTCTAGATACTCCCAGCA 57.749 45.455 21.88 9.32 41.02 4.41
2722 2781 5.076873 AGATGAGTTCTAGATACTCCCAGC 58.923 45.833 21.88 13.51 41.02 4.85
2748 2807 9.911788 AGTGAATGAGACCAAATTATAACTCAT 57.088 29.630 0.00 0.00 43.71 2.90
2749 2808 9.739276 AAGTGAATGAGACCAAATTATAACTCA 57.261 29.630 0.00 0.00 38.44 3.41
2757 2816 9.883142 TGTTTTTAAAGTGAATGAGACCAAATT 57.117 25.926 0.00 0.00 0.00 1.82
2758 2817 9.883142 TTGTTTTTAAAGTGAATGAGACCAAAT 57.117 25.926 0.00 0.00 0.00 2.32
2759 2818 9.364989 CTTGTTTTTAAAGTGAATGAGACCAAA 57.635 29.630 0.00 0.00 0.00 3.28
2760 2819 8.744652 TCTTGTTTTTAAAGTGAATGAGACCAA 58.255 29.630 0.00 0.00 0.00 3.67
2761 2820 8.287439 TCTTGTTTTTAAAGTGAATGAGACCA 57.713 30.769 0.00 0.00 0.00 4.02
2762 2821 9.020813 GTTCTTGTTTTTAAAGTGAATGAGACC 57.979 33.333 0.00 0.00 0.00 3.85
2763 2822 9.567848 TGTTCTTGTTTTTAAAGTGAATGAGAC 57.432 29.630 0.00 0.00 0.00 3.36
2774 2833 9.720769 TGGGTTGTATTTGTTCTTGTTTTTAAA 57.279 25.926 0.00 0.00 0.00 1.52
2775 2834 9.152595 GTGGGTTGTATTTGTTCTTGTTTTTAA 57.847 29.630 0.00 0.00 0.00 1.52
2776 2835 7.488471 CGTGGGTTGTATTTGTTCTTGTTTTTA 59.512 33.333 0.00 0.00 0.00 1.52
2777 2836 6.311690 CGTGGGTTGTATTTGTTCTTGTTTTT 59.688 34.615 0.00 0.00 0.00 1.94
2778 2837 5.808030 CGTGGGTTGTATTTGTTCTTGTTTT 59.192 36.000 0.00 0.00 0.00 2.43
2779 2838 5.105675 ACGTGGGTTGTATTTGTTCTTGTTT 60.106 36.000 0.00 0.00 0.00 2.83
2780 2839 4.399934 ACGTGGGTTGTATTTGTTCTTGTT 59.600 37.500 0.00 0.00 0.00 2.83
2781 2840 3.949113 ACGTGGGTTGTATTTGTTCTTGT 59.051 39.130 0.00 0.00 0.00 3.16
2782 2841 4.035792 TGACGTGGGTTGTATTTGTTCTTG 59.964 41.667 0.00 0.00 0.00 3.02
2783 2842 4.200874 TGACGTGGGTTGTATTTGTTCTT 58.799 39.130 0.00 0.00 0.00 2.52
2784 2843 3.811083 TGACGTGGGTTGTATTTGTTCT 58.189 40.909 0.00 0.00 0.00 3.01
2785 2844 3.608474 GCTGACGTGGGTTGTATTTGTTC 60.608 47.826 0.00 0.00 0.00 3.18
2786 2845 2.292292 GCTGACGTGGGTTGTATTTGTT 59.708 45.455 0.00 0.00 0.00 2.83
2787 2846 1.877443 GCTGACGTGGGTTGTATTTGT 59.123 47.619 0.00 0.00 0.00 2.83
2788 2847 1.876799 TGCTGACGTGGGTTGTATTTG 59.123 47.619 0.00 0.00 0.00 2.32
2789 2848 1.877443 GTGCTGACGTGGGTTGTATTT 59.123 47.619 0.00 0.00 0.00 1.40
2790 2849 1.202710 TGTGCTGACGTGGGTTGTATT 60.203 47.619 0.00 0.00 0.00 1.89
2791 2850 0.394938 TGTGCTGACGTGGGTTGTAT 59.605 50.000 0.00 0.00 0.00 2.29
2792 2851 0.531090 GTGTGCTGACGTGGGTTGTA 60.531 55.000 0.00 0.00 0.00 2.41
2793 2852 1.817941 GTGTGCTGACGTGGGTTGT 60.818 57.895 0.00 0.00 0.00 3.32
2794 2853 1.817520 TGTGTGCTGACGTGGGTTG 60.818 57.895 0.00 0.00 0.00 3.77
2795 2854 1.817941 GTGTGTGCTGACGTGGGTT 60.818 57.895 0.00 0.00 0.00 4.11
2796 2855 2.203015 GTGTGTGCTGACGTGGGT 60.203 61.111 0.00 0.00 0.00 4.51
2797 2856 2.203001 TGTGTGTGCTGACGTGGG 60.203 61.111 0.00 0.00 0.00 4.61
2798 2857 1.159713 ATGTGTGTGTGCTGACGTGG 61.160 55.000 0.00 0.00 0.00 4.94
2799 2858 0.233074 GATGTGTGTGTGCTGACGTG 59.767 55.000 0.00 0.00 0.00 4.49
2800 2859 0.104855 AGATGTGTGTGTGCTGACGT 59.895 50.000 0.00 0.00 0.00 4.34
2801 2860 1.220529 AAGATGTGTGTGTGCTGACG 58.779 50.000 0.00 0.00 0.00 4.35
2802 2861 4.033358 GCTATAAGATGTGTGTGTGCTGAC 59.967 45.833 0.00 0.00 0.00 3.51
2803 2862 4.183865 GCTATAAGATGTGTGTGTGCTGA 58.816 43.478 0.00 0.00 0.00 4.26
2804 2863 3.934579 TGCTATAAGATGTGTGTGTGCTG 59.065 43.478 0.00 0.00 0.00 4.41
2805 2864 4.206477 TGCTATAAGATGTGTGTGTGCT 57.794 40.909 0.00 0.00 0.00 4.40
2806 2865 4.571984 TGATGCTATAAGATGTGTGTGTGC 59.428 41.667 0.00 0.00 0.00 4.57
2807 2866 5.581874 TGTGATGCTATAAGATGTGTGTGTG 59.418 40.000 0.00 0.00 0.00 3.82
2808 2867 5.733676 TGTGATGCTATAAGATGTGTGTGT 58.266 37.500 0.00 0.00 0.00 3.72
2809 2868 6.073385 GGATGTGATGCTATAAGATGTGTGTG 60.073 42.308 0.00 0.00 0.00 3.82
2810 2869 5.994054 GGATGTGATGCTATAAGATGTGTGT 59.006 40.000 0.00 0.00 0.00 3.72
2811 2870 5.993441 TGGATGTGATGCTATAAGATGTGTG 59.007 40.000 0.00 0.00 0.00 3.82
2812 2871 6.178607 TGGATGTGATGCTATAAGATGTGT 57.821 37.500 0.00 0.00 0.00 3.72
2813 2872 7.683437 ATTGGATGTGATGCTATAAGATGTG 57.317 36.000 0.00 0.00 0.00 3.21
2814 2873 8.600668 ACTATTGGATGTGATGCTATAAGATGT 58.399 33.333 0.00 0.00 0.00 3.06
2815 2874 9.445878 AACTATTGGATGTGATGCTATAAGATG 57.554 33.333 0.00 0.00 0.00 2.90
2823 2882 9.071276 CCTTTTATAACTATTGGATGTGATGCT 57.929 33.333 0.00 0.00 0.00 3.79
2824 2883 8.850156 ACCTTTTATAACTATTGGATGTGATGC 58.150 33.333 0.00 0.00 0.00 3.91
2827 2886 9.967451 TTCACCTTTTATAACTATTGGATGTGA 57.033 29.630 0.00 0.00 0.00 3.58
2838 2897 8.934023 TTTGGTCTCATTCACCTTTTATAACT 57.066 30.769 0.00 0.00 34.66 2.24
2845 2904 9.927081 AGATATAATTTGGTCTCATTCACCTTT 57.073 29.630 0.00 0.00 34.66 3.11
2846 2905 9.566432 GAGATATAATTTGGTCTCATTCACCTT 57.434 33.333 8.11 0.00 37.60 3.50
2847 2906 8.717717 TGAGATATAATTTGGTCTCATTCACCT 58.282 33.333 10.50 0.00 41.40 4.00
2848 2907 8.908786 TGAGATATAATTTGGTCTCATTCACC 57.091 34.615 10.50 0.00 41.40 4.02
2871 2930 7.547019 CAGTTTTGCTACAACTCATCTAGATGA 59.453 37.037 29.17 29.17 44.83 2.92
2872 2931 7.332926 ACAGTTTTGCTACAACTCATCTAGATG 59.667 37.037 24.32 24.32 40.09 2.90
2873 2932 7.390027 ACAGTTTTGCTACAACTCATCTAGAT 58.610 34.615 0.00 0.00 31.83 1.98
2874 2933 6.759272 ACAGTTTTGCTACAACTCATCTAGA 58.241 36.000 0.00 0.00 31.83 2.43
2875 2934 8.709386 ATACAGTTTTGCTACAACTCATCTAG 57.291 34.615 0.00 0.00 31.83 2.43
2877 2936 9.672673 AATATACAGTTTTGCTACAACTCATCT 57.327 29.630 0.00 0.00 31.83 2.90
2878 2937 9.708222 CAATATACAGTTTTGCTACAACTCATC 57.292 33.333 0.00 0.00 31.83 2.92
2879 2938 8.184192 GCAATATACAGTTTTGCTACAACTCAT 58.816 33.333 7.83 0.00 41.86 2.90
2880 2939 7.526608 GCAATATACAGTTTTGCTACAACTCA 58.473 34.615 7.83 0.00 41.86 3.41
2881 2940 7.954906 GCAATATACAGTTTTGCTACAACTC 57.045 36.000 7.83 0.00 41.86 3.01
2889 2948 6.438763 GGATGGTAGCAATATACAGTTTTGC 58.561 40.000 0.00 7.23 44.67 3.68
2890 2949 6.293407 CGGGATGGTAGCAATATACAGTTTTG 60.293 42.308 0.00 0.00 0.00 2.44
2891 2950 5.763204 CGGGATGGTAGCAATATACAGTTTT 59.237 40.000 0.00 0.00 0.00 2.43
2892 2951 5.071250 TCGGGATGGTAGCAATATACAGTTT 59.929 40.000 0.00 0.00 0.00 2.66
2893 2952 4.591498 TCGGGATGGTAGCAATATACAGTT 59.409 41.667 0.00 0.00 0.00 3.16
2894 2953 4.157246 TCGGGATGGTAGCAATATACAGT 58.843 43.478 0.00 0.00 0.00 3.55
2895 2954 4.801330 TCGGGATGGTAGCAATATACAG 57.199 45.455 0.00 0.00 0.00 2.74
2896 2955 5.755409 ATTCGGGATGGTAGCAATATACA 57.245 39.130 0.00 0.00 0.00 2.29
2897 2956 6.622896 GCAAATTCGGGATGGTAGCAATATAC 60.623 42.308 0.00 0.00 0.00 1.47
2946 3008 1.608590 ACTGGAAGCGTTTTCCATGTG 59.391 47.619 19.38 12.74 46.47 3.21
2947 3009 1.880027 GACTGGAAGCGTTTTCCATGT 59.120 47.619 19.38 18.09 46.47 3.21
2948 3010 1.135972 CGACTGGAAGCGTTTTCCATG 60.136 52.381 19.38 15.93 46.47 3.66
2949 3011 1.156736 CGACTGGAAGCGTTTTCCAT 58.843 50.000 19.38 12.08 46.47 3.41
2950 3012 0.882927 CCGACTGGAAGCGTTTTCCA 60.883 55.000 18.42 18.42 45.61 3.53
2984 3046 2.644992 GTGCAAGACCGGCCAAAG 59.355 61.111 0.00 0.00 0.00 2.77
3008 3070 3.322369 CCACTTAAGATGTGTGCGTGTA 58.678 45.455 10.09 0.00 33.92 2.90
3011 3073 1.071699 ACCCACTTAAGATGTGTGCGT 59.928 47.619 10.09 0.00 33.92 5.24
3016 3078 2.359900 GCTGGACCCACTTAAGATGTG 58.640 52.381 10.09 0.00 35.39 3.21
3017 3079 1.282157 GGCTGGACCCACTTAAGATGT 59.718 52.381 10.09 2.75 0.00 3.06
3052 3114 7.733773 TCTGGTCATTTGAGAGAATAAGGTA 57.266 36.000 0.00 0.00 0.00 3.08
3060 3122 4.099633 AGTGGATCTGGTCATTTGAGAGA 58.900 43.478 0.00 0.00 0.00 3.10
3069 3131 1.500474 GGGATGAGTGGATCTGGTCA 58.500 55.000 0.00 0.00 0.00 4.02
3092 3154 1.215647 GGTCGCGAGGTGAGTGAAT 59.784 57.895 10.24 0.00 0.00 2.57
3094 3156 3.371063 GGGTCGCGAGGTGAGTGA 61.371 66.667 10.24 0.00 0.00 3.41
3096 3158 3.374402 CAGGGTCGCGAGGTGAGT 61.374 66.667 10.24 0.00 0.00 3.41
3101 3163 3.976701 AAATGGCAGGGTCGCGAGG 62.977 63.158 10.24 0.00 0.00 4.63
3106 3168 1.089920 CTGAAGAAATGGCAGGGTCG 58.910 55.000 0.00 0.00 0.00 4.79
3134 3196 2.182030 GACGAGGTGGAAGCGGAG 59.818 66.667 0.00 0.00 40.95 4.63
3135 3197 3.379445 GGACGAGGTGGAAGCGGA 61.379 66.667 0.00 0.00 40.95 5.54
3136 3198 4.452733 GGGACGAGGTGGAAGCGG 62.453 72.222 0.00 0.00 40.95 5.52
3137 3199 3.019003 ATGGGACGAGGTGGAAGCG 62.019 63.158 0.00 0.00 40.95 4.68
3197 3259 2.513204 CTCCACTGCCTCGCATGG 60.513 66.667 0.00 8.09 38.13 3.66
3202 3264 2.888863 GACCTCTCCACTGCCTCG 59.111 66.667 0.00 0.00 0.00 4.63
3203 3265 2.716017 CCGACCTCTCCACTGCCTC 61.716 68.421 0.00 0.00 0.00 4.70
3204 3266 2.681778 CCGACCTCTCCACTGCCT 60.682 66.667 0.00 0.00 0.00 4.75
3206 3268 4.459089 GGCCGACCTCTCCACTGC 62.459 72.222 0.00 0.00 0.00 4.40
3207 3269 3.775654 GGGCCGACCTCTCCACTG 61.776 72.222 0.00 0.00 35.85 3.66
3225 3291 2.664851 CGCAACAGCCTTCACCGA 60.665 61.111 0.00 0.00 0.00 4.69
3229 3295 1.301716 GAGGACGCAACAGCCTTCA 60.302 57.895 0.00 0.00 30.70 3.02
3301 3367 0.465642 GGCCGTCCCTTTCCTATTGG 60.466 60.000 0.00 0.00 0.00 3.16
3305 3371 2.652095 CGTGGCCGTCCCTTTCCTA 61.652 63.158 0.00 0.00 0.00 2.94
3315 3381 3.327404 AAATCCTCCCGTGGCCGT 61.327 61.111 0.00 0.00 0.00 5.68
3326 3392 1.586154 CGCCGGTTGAAGCAAATCCT 61.586 55.000 1.90 0.00 0.00 3.24
3346 3432 0.527565 CTGGTTGAAGCAAATCCCCG 59.472 55.000 0.00 0.00 0.00 5.73
3400 3486 9.476202 AAAATCAAGAAAATACAGCAACTTACC 57.524 29.630 0.00 0.00 0.00 2.85
3407 3493 6.424509 CCAGCAAAAATCAAGAAAATACAGCA 59.575 34.615 0.00 0.00 0.00 4.41
3409 3495 8.490355 GTTCCAGCAAAAATCAAGAAAATACAG 58.510 33.333 0.00 0.00 0.00 2.74
3414 3500 5.122519 GGGTTCCAGCAAAAATCAAGAAAA 58.877 37.500 0.00 0.00 0.00 2.29
3427 3513 0.850100 TCAGAAAAGGGGTTCCAGCA 59.150 50.000 0.00 0.00 34.83 4.41
3437 3523 4.309933 GGTTCCAGCAAAATCAGAAAAGG 58.690 43.478 0.00 0.00 0.00 3.11
3441 3527 1.885887 CCGGTTCCAGCAAAATCAGAA 59.114 47.619 0.00 0.00 0.00 3.02
3442 3528 1.202879 ACCGGTTCCAGCAAAATCAGA 60.203 47.619 0.00 0.00 0.00 3.27
3459 3545 3.862267 TGTTGAAGCAAATCAAAACACCG 59.138 39.130 1.78 0.00 40.76 4.94
3460 3546 4.270808 CCTGTTGAAGCAAATCAAAACACC 59.729 41.667 1.78 0.00 40.76 4.16
3463 3549 6.277918 CTTCCTGTTGAAGCAAATCAAAAC 57.722 37.500 1.78 0.00 43.79 2.43
3476 3562 3.170362 CTGCCCCCTTCCTGTTGA 58.830 61.111 0.00 0.00 0.00 3.18
3501 3587 2.201927 AAAAATCATGGAGCCCGCC 58.798 52.632 0.00 0.00 0.00 6.13
3556 3642 2.388232 CCTCGCCGGTTGTAGCAAC 61.388 63.158 1.90 3.62 0.00 4.17
3578 3664 4.845580 CTGTAGCCGCCCCAGCAG 62.846 72.222 0.00 0.00 39.83 4.24
3585 3671 3.917760 ATCCTCGCTGTAGCCGCC 61.918 66.667 0.00 0.00 37.91 6.13
3586 3672 2.659897 CATCCTCGCTGTAGCCGC 60.660 66.667 0.00 0.00 37.91 6.53
3587 3673 2.028190 CCATCCTCGCTGTAGCCG 59.972 66.667 0.00 0.00 37.91 5.52
3588 3674 1.227380 CACCATCCTCGCTGTAGCC 60.227 63.158 0.00 0.00 37.91 3.93
3589 3675 1.884926 GCACCATCCTCGCTGTAGC 60.885 63.158 0.00 0.00 37.78 3.58
3590 3676 1.000827 CTAGCACCATCCTCGCTGTAG 60.001 57.143 0.00 0.00 37.20 2.74
3591 3677 1.032794 CTAGCACCATCCTCGCTGTA 58.967 55.000 0.00 0.00 37.20 2.74
3592 3678 1.680522 CCTAGCACCATCCTCGCTGT 61.681 60.000 0.00 0.00 37.20 4.40
3593 3679 1.068753 CCTAGCACCATCCTCGCTG 59.931 63.158 0.00 0.00 37.20 5.18
3594 3680 2.136878 CCCTAGCACCATCCTCGCT 61.137 63.158 0.00 0.00 39.80 4.93
3595 3681 2.423446 CCCTAGCACCATCCTCGC 59.577 66.667 0.00 0.00 0.00 5.03
3596 3682 2.423446 GCCCTAGCACCATCCTCG 59.577 66.667 0.00 0.00 39.53 4.63
3597 3683 2.423446 CGCCCTAGCACCATCCTC 59.577 66.667 0.00 0.00 39.83 3.71
3598 3684 3.164269 CCGCCCTAGCACCATCCT 61.164 66.667 0.00 0.00 39.83 3.24
3599 3685 4.937431 GCCGCCCTAGCACCATCC 62.937 72.222 0.00 0.00 39.83 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.