Multiple sequence alignment - TraesCS4B01G328700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G328700 chr4B 100.000 3151 0 0 1 3151 619660454 619657304 0.000000e+00 5819.0
1 TraesCS4B01G328700 chr4B 86.706 1685 147 36 514 2150 619590446 619588791 0.000000e+00 1799.0
2 TraesCS4B01G328700 chr4B 87.492 1575 128 29 651 2180 619936123 619934573 0.000000e+00 1753.0
3 TraesCS4B01G328700 chr4B 89.843 1270 109 11 1193 2450 619787721 619786460 0.000000e+00 1613.0
4 TraesCS4B01G328700 chr4B 88.940 1085 89 15 1193 2263 619774679 619773612 0.000000e+00 1310.0
5 TraesCS4B01G328700 chr4B 97.087 515 15 0 2637 3151 302836860 302837374 0.000000e+00 869.0
6 TraesCS4B01G328700 chr4B 97.087 515 15 0 2637 3151 344339531 344340045 0.000000e+00 869.0
7 TraesCS4B01G328700 chr4B 81.835 556 53 21 657 1193 619775241 619774715 1.040000e-114 424.0
8 TraesCS4B01G328700 chr4B 81.305 567 42 25 661 1193 619788288 619787752 4.900000e-108 401.0
9 TraesCS4B01G328700 chr4B 85.328 259 33 5 136 390 453261712 453261969 2.410000e-66 263.0
10 TraesCS4B01G328700 chr4B 79.300 343 33 5 2302 2636 619934467 619934155 4.120000e-49 206.0
11 TraesCS4B01G328700 chr4B 96.774 62 2 0 1 62 591607276 591607215 1.550000e-18 104.0
12 TraesCS4B01G328700 chr4B 95.161 62 3 0 1 62 168823367 168823428 7.190000e-17 99.0
13 TraesCS4B01G328700 chr4D 87.705 2009 158 30 654 2636 485764849 485762904 0.000000e+00 2259.0
14 TraesCS4B01G328700 chr4D 86.541 1538 136 36 654 2150 485684042 485682535 0.000000e+00 1628.0
15 TraesCS4B01G328700 chr4D 92.683 164 9 3 449 610 485685223 485685061 1.890000e-57 233.0
16 TraesCS4B01G328700 chr5A 88.181 1633 129 31 654 2241 666684046 666682433 0.000000e+00 1888.0
17 TraesCS4B01G328700 chr5A 86.160 1763 148 44 449 2150 666526156 666524429 0.000000e+00 1816.0
18 TraesCS4B01G328700 chr5A 85.336 1548 163 38 654 2161 666589180 666587657 0.000000e+00 1543.0
19 TraesCS4B01G328700 chr5A 84.578 1446 129 39 661 2044 666657383 666655970 0.000000e+00 1349.0
20 TraesCS4B01G328700 chr5A 81.792 346 30 5 2292 2636 666679686 666679373 3.120000e-65 259.0
21 TraesCS4B01G328700 chr5A 93.197 147 7 3 249 392 606952676 606952530 2.460000e-51 213.0
22 TraesCS4B01G328700 chr5A 94.891 137 6 1 449 584 666589448 666589312 2.460000e-51 213.0
23 TraesCS4B01G328700 chr5A 92.126 127 8 2 133 257 681485070 681485196 8.980000e-41 178.0
24 TraesCS4B01G328700 chr3B 97.282 515 14 0 2637 3151 787328060 787327546 0.000000e+00 874.0
25 TraesCS4B01G328700 chr3B 93.836 146 7 2 249 392 808100919 808101064 5.290000e-53 219.0
26 TraesCS4B01G328700 chr3B 88.690 168 12 6 251 415 606376194 606376031 6.890000e-47 198.0
27 TraesCS4B01G328700 chr3B 94.030 67 3 1 1 67 526906443 526906378 2.000000e-17 100.0
28 TraesCS4B01G328700 chr6B 97.093 516 15 0 2636 3151 137453299 137452784 0.000000e+00 870.0
29 TraesCS4B01G328700 chr6B 96.532 519 17 1 2634 3151 461307085 461306567 0.000000e+00 857.0
30 TraesCS4B01G328700 chr6B 96.825 63 2 0 1 63 301531678 301531740 4.300000e-19 106.0
31 TraesCS4B01G328700 chr6B 94.030 67 4 0 1 67 24897727 24897793 5.560000e-18 102.0
32 TraesCS4B01G328700 chr7B 96.724 519 16 1 2634 3151 313114150 313113632 0.000000e+00 863.0
33 TraesCS4B01G328700 chr7B 96.893 515 16 0 2637 3151 453704812 453704298 0.000000e+00 863.0
34 TraesCS4B01G328700 chr7B 96.774 62 2 0 1 62 577786920 577786981 1.550000e-18 104.0
35 TraesCS4B01G328700 chr5B 96.893 515 16 0 2637 3151 36354900 36354386 0.000000e+00 863.0
36 TraesCS4B01G328700 chr5B 94.483 145 6 2 251 393 696341320 696341464 4.090000e-54 222.0
37 TraesCS4B01G328700 chr1B 96.893 515 16 0 2637 3151 204497282 204496768 0.000000e+00 863.0
38 TraesCS4B01G328700 chr1B 91.935 124 8 2 139 260 589545618 589545495 4.180000e-39 172.0
39 TraesCS4B01G328700 chr6D 93.836 146 7 2 251 394 18495455 18495600 5.290000e-53 219.0
40 TraesCS4B01G328700 chr6D 91.549 71 4 1 1 69 309286634 309286564 2.590000e-16 97.1
41 TraesCS4B01G328700 chr2D 93.836 146 6 3 251 393 12302005 12301860 1.900000e-52 217.0
42 TraesCS4B01G328700 chr2D 93.750 144 7 2 251 392 106145629 106145486 6.840000e-52 215.0
43 TraesCS4B01G328700 chr2D 93.103 145 8 2 251 393 534061337 534061481 8.850000e-51 211.0
44 TraesCS4B01G328700 chr2D 96.825 63 2 0 1 63 620336834 620336772 4.300000e-19 106.0
45 TraesCS4B01G328700 chr5D 93.243 148 7 3 251 396 300162039 300161893 6.840000e-52 215.0
46 TraesCS4B01G328700 chr7A 92.000 150 9 3 251 397 734933737 734933588 1.150000e-49 207.0
47 TraesCS4B01G328700 chr4A 90.909 154 11 3 251 401 166994061 166994214 1.480000e-48 204.0
48 TraesCS4B01G328700 chr4A 91.935 124 8 2 139 260 559496821 559496698 4.180000e-39 172.0
49 TraesCS4B01G328700 chr4A 91.270 126 9 2 134 257 89677974 89678099 1.500000e-38 171.0
50 TraesCS4B01G328700 chr4A 91.129 124 9 2 139 260 110641413 110641290 1.940000e-37 167.0
51 TraesCS4B01G328700 chr3A 92.742 124 7 2 136 257 8568298 8568421 8.980000e-41 178.0
52 TraesCS4B01G328700 chr2A 92.742 124 7 2 139 260 256202369 256202246 8.980000e-41 178.0
53 TraesCS4B01G328700 chr1A 92.742 124 7 2 136 257 485220633 485220756 8.980000e-41 178.0
54 TraesCS4B01G328700 chr2B 96.774 62 2 0 1 62 507405333 507405272 1.550000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G328700 chr4B 619657304 619660454 3150 True 5819.0 5819 100.0000 1 3151 1 chr4B.!!$R3 3150
1 TraesCS4B01G328700 chr4B 619588791 619590446 1655 True 1799.0 1799 86.7060 514 2150 1 chr4B.!!$R2 1636
2 TraesCS4B01G328700 chr4B 619786460 619788288 1828 True 1007.0 1613 85.5740 661 2450 2 chr4B.!!$R5 1789
3 TraesCS4B01G328700 chr4B 619934155 619936123 1968 True 979.5 1753 83.3960 651 2636 2 chr4B.!!$R6 1985
4 TraesCS4B01G328700 chr4B 302836860 302837374 514 False 869.0 869 97.0870 2637 3151 1 chr4B.!!$F2 514
5 TraesCS4B01G328700 chr4B 344339531 344340045 514 False 869.0 869 97.0870 2637 3151 1 chr4B.!!$F3 514
6 TraesCS4B01G328700 chr4B 619773612 619775241 1629 True 867.0 1310 85.3875 657 2263 2 chr4B.!!$R4 1606
7 TraesCS4B01G328700 chr4D 485762904 485764849 1945 True 2259.0 2259 87.7050 654 2636 1 chr4D.!!$R1 1982
8 TraesCS4B01G328700 chr4D 485682535 485685223 2688 True 930.5 1628 89.6120 449 2150 2 chr4D.!!$R2 1701
9 TraesCS4B01G328700 chr5A 666524429 666526156 1727 True 1816.0 1816 86.1600 449 2150 1 chr5A.!!$R2 1701
10 TraesCS4B01G328700 chr5A 666655970 666657383 1413 True 1349.0 1349 84.5780 661 2044 1 chr5A.!!$R3 1383
11 TraesCS4B01G328700 chr5A 666679373 666684046 4673 True 1073.5 1888 84.9865 654 2636 2 chr5A.!!$R5 1982
12 TraesCS4B01G328700 chr5A 666587657 666589448 1791 True 878.0 1543 90.1135 449 2161 2 chr5A.!!$R4 1712
13 TraesCS4B01G328700 chr3B 787327546 787328060 514 True 874.0 874 97.2820 2637 3151 1 chr3B.!!$R3 514
14 TraesCS4B01G328700 chr6B 137452784 137453299 515 True 870.0 870 97.0930 2636 3151 1 chr6B.!!$R1 515
15 TraesCS4B01G328700 chr6B 461306567 461307085 518 True 857.0 857 96.5320 2634 3151 1 chr6B.!!$R2 517
16 TraesCS4B01G328700 chr7B 313113632 313114150 518 True 863.0 863 96.7240 2634 3151 1 chr7B.!!$R1 517
17 TraesCS4B01G328700 chr7B 453704298 453704812 514 True 863.0 863 96.8930 2637 3151 1 chr7B.!!$R2 514
18 TraesCS4B01G328700 chr5B 36354386 36354900 514 True 863.0 863 96.8930 2637 3151 1 chr5B.!!$R1 514
19 TraesCS4B01G328700 chr1B 204496768 204497282 514 True 863.0 863 96.8930 2637 3151 1 chr1B.!!$R1 514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
147 148 0.033208 CGTGTGTACCCCCTACCCTA 60.033 60.0 0.0 0.0 0.00 3.53 F
413 414 0.034089 ATGTTTAGGGGGCTGCTGAC 60.034 55.0 0.0 0.0 0.00 3.51 F
832 1859 0.040958 CAGTGCCAAGAAACTGCGAC 60.041 55.0 0.0 0.0 37.58 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2041 3270 0.108756 GAACACTCCGTGGCTACTCC 60.109 60.000 0.0 0.0 37.94 3.85 R
2045 3274 0.892358 AGTCGAACACTCCGTGGCTA 60.892 55.000 0.0 0.0 37.94 3.93 R
2622 6572 1.140252 GTTATCATGTACCCCCGTGCT 59.860 52.381 0.0 0.0 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.793861 TTGCCGTTAGCTAGCAAACG 59.206 50.000 18.83 13.12 43.14 3.60
32 33 2.179949 GCAAACGGCAAAGATCTAGC 57.820 50.000 10.73 10.73 43.97 3.42
33 34 1.740025 GCAAACGGCAAAGATCTAGCT 59.260 47.619 16.77 0.00 43.97 3.32
34 35 2.476854 GCAAACGGCAAAGATCTAGCTG 60.477 50.000 21.23 21.23 43.97 4.24
35 36 3.002791 CAAACGGCAAAGATCTAGCTGA 58.997 45.455 26.79 0.00 38.03 4.26
36 37 2.301577 ACGGCAAAGATCTAGCTGAC 57.698 50.000 26.79 13.50 38.03 3.51
37 38 1.203928 CGGCAAAGATCTAGCTGACG 58.796 55.000 19.20 15.56 36.79 4.35
38 39 1.576356 GGCAAAGATCTAGCTGACGG 58.424 55.000 16.77 0.00 0.00 4.79
39 40 0.933796 GCAAAGATCTAGCTGACGGC 59.066 55.000 11.67 0.00 42.19 5.68
40 41 1.740380 GCAAAGATCTAGCTGACGGCA 60.740 52.381 9.39 0.00 44.79 5.69
41 42 2.621338 CAAAGATCTAGCTGACGGCAA 58.379 47.619 9.39 0.00 44.79 4.52
42 43 3.002791 CAAAGATCTAGCTGACGGCAAA 58.997 45.455 9.39 0.00 44.79 3.68
43 44 2.593346 AGATCTAGCTGACGGCAAAG 57.407 50.000 9.39 5.69 44.79 2.77
44 45 2.103373 AGATCTAGCTGACGGCAAAGA 58.897 47.619 9.39 11.08 44.79 2.52
45 46 2.697751 AGATCTAGCTGACGGCAAAGAT 59.302 45.455 18.88 18.88 43.68 2.40
46 47 2.586258 TCTAGCTGACGGCAAAGATC 57.414 50.000 9.39 0.00 44.79 2.75
47 48 1.137086 TCTAGCTGACGGCAAAGATCC 59.863 52.381 9.39 0.00 44.79 3.36
48 49 1.137872 CTAGCTGACGGCAAAGATCCT 59.862 52.381 9.39 0.00 44.79 3.24
49 50 0.392193 AGCTGACGGCAAAGATCCTG 60.392 55.000 9.39 0.00 44.79 3.86
50 51 0.391661 GCTGACGGCAAAGATCCTGA 60.392 55.000 0.00 0.00 41.35 3.86
51 52 1.745141 GCTGACGGCAAAGATCCTGAT 60.745 52.381 0.00 0.00 41.35 2.90
52 53 2.636830 CTGACGGCAAAGATCCTGATT 58.363 47.619 0.00 0.00 0.00 2.57
53 54 2.611292 CTGACGGCAAAGATCCTGATTC 59.389 50.000 0.00 0.00 0.00 2.52
54 55 1.943340 GACGGCAAAGATCCTGATTCC 59.057 52.381 0.00 0.00 0.00 3.01
55 56 1.281867 ACGGCAAAGATCCTGATTCCA 59.718 47.619 0.00 0.00 0.00 3.53
56 57 1.945394 CGGCAAAGATCCTGATTCCAG 59.055 52.381 0.00 0.00 40.09 3.86
57 58 2.681976 CGGCAAAGATCCTGATTCCAGT 60.682 50.000 0.00 0.00 38.74 4.00
58 59 3.432186 CGGCAAAGATCCTGATTCCAGTA 60.432 47.826 0.00 0.00 38.74 2.74
59 60 4.133078 GGCAAAGATCCTGATTCCAGTAG 58.867 47.826 0.00 0.00 38.74 2.57
60 61 4.384647 GGCAAAGATCCTGATTCCAGTAGT 60.385 45.833 0.00 0.00 38.74 2.73
61 62 4.574013 GCAAAGATCCTGATTCCAGTAGTG 59.426 45.833 0.00 0.00 38.74 2.74
62 63 5.738909 CAAAGATCCTGATTCCAGTAGTGT 58.261 41.667 0.00 0.00 38.74 3.55
63 64 5.350504 AAGATCCTGATTCCAGTAGTGTG 57.649 43.478 0.00 0.00 38.74 3.82
64 65 4.614475 AGATCCTGATTCCAGTAGTGTGA 58.386 43.478 0.00 0.00 38.74 3.58
65 66 4.648762 AGATCCTGATTCCAGTAGTGTGAG 59.351 45.833 0.00 0.00 38.74 3.51
66 67 4.047627 TCCTGATTCCAGTAGTGTGAGA 57.952 45.455 0.00 0.00 38.74 3.27
67 68 3.764434 TCCTGATTCCAGTAGTGTGAGAC 59.236 47.826 0.00 0.00 38.74 3.36
68 69 3.118956 CCTGATTCCAGTAGTGTGAGACC 60.119 52.174 0.00 0.00 38.74 3.85
69 70 2.492088 TGATTCCAGTAGTGTGAGACCG 59.508 50.000 0.00 0.00 0.00 4.79
70 71 2.281539 TTCCAGTAGTGTGAGACCGA 57.718 50.000 0.00 0.00 0.00 4.69
71 72 2.509166 TCCAGTAGTGTGAGACCGAT 57.491 50.000 0.00 0.00 0.00 4.18
72 73 2.803956 TCCAGTAGTGTGAGACCGATT 58.196 47.619 0.00 0.00 0.00 3.34
73 74 3.162666 TCCAGTAGTGTGAGACCGATTT 58.837 45.455 0.00 0.00 0.00 2.17
74 75 3.192844 TCCAGTAGTGTGAGACCGATTTC 59.807 47.826 0.00 0.00 0.00 2.17
75 76 3.056821 CCAGTAGTGTGAGACCGATTTCA 60.057 47.826 0.00 0.00 0.00 2.69
76 77 4.382040 CCAGTAGTGTGAGACCGATTTCAT 60.382 45.833 0.00 0.00 0.00 2.57
77 78 4.564372 CAGTAGTGTGAGACCGATTTCATG 59.436 45.833 0.00 0.00 0.00 3.07
78 79 2.350522 AGTGTGAGACCGATTTCATGC 58.649 47.619 0.00 0.00 0.00 4.06
79 80 1.398390 GTGTGAGACCGATTTCATGCC 59.602 52.381 0.00 0.00 0.00 4.40
80 81 1.003003 TGTGAGACCGATTTCATGCCA 59.997 47.619 0.00 0.00 0.00 4.92
81 82 2.292267 GTGAGACCGATTTCATGCCAT 58.708 47.619 0.00 0.00 0.00 4.40
82 83 2.289002 GTGAGACCGATTTCATGCCATC 59.711 50.000 0.00 0.00 0.00 3.51
83 84 1.876156 GAGACCGATTTCATGCCATCC 59.124 52.381 0.00 0.00 0.00 3.51
84 85 0.954452 GACCGATTTCATGCCATCCC 59.046 55.000 0.00 0.00 0.00 3.85
85 86 0.258484 ACCGATTTCATGCCATCCCA 59.742 50.000 0.00 0.00 0.00 4.37
86 87 1.133388 ACCGATTTCATGCCATCCCAT 60.133 47.619 0.00 0.00 0.00 4.00
87 88 1.271379 CCGATTTCATGCCATCCCATG 59.729 52.381 0.00 0.00 43.04 3.66
88 89 1.336517 CGATTTCATGCCATCCCATGC 60.337 52.381 0.00 0.00 41.77 4.06
89 90 1.689813 GATTTCATGCCATCCCATGCA 59.310 47.619 0.00 0.00 41.77 3.96
91 92 1.334160 TTCATGCCATCCCATGCATC 58.666 50.000 0.00 0.00 45.98 3.91
92 93 0.541063 TCATGCCATCCCATGCATCC 60.541 55.000 0.00 0.00 45.98 3.51
93 94 0.830023 CATGCCATCCCATGCATCCA 60.830 55.000 0.00 0.00 45.98 3.41
94 95 0.105401 ATGCCATCCCATGCATCCAA 60.105 50.000 0.00 0.00 44.58 3.53
95 96 0.325390 TGCCATCCCATGCATCCAAA 60.325 50.000 0.00 0.00 31.31 3.28
96 97 0.105408 GCCATCCCATGCATCCAAAC 59.895 55.000 0.00 0.00 0.00 2.93
97 98 1.784358 CCATCCCATGCATCCAAACT 58.216 50.000 0.00 0.00 0.00 2.66
98 99 2.112998 CCATCCCATGCATCCAAACTT 58.887 47.619 0.00 0.00 0.00 2.66
99 100 2.502538 CCATCCCATGCATCCAAACTTT 59.497 45.455 0.00 0.00 0.00 2.66
100 101 3.431207 CCATCCCATGCATCCAAACTTTC 60.431 47.826 0.00 0.00 0.00 2.62
101 102 1.818060 TCCCATGCATCCAAACTTTCG 59.182 47.619 0.00 0.00 0.00 3.46
102 103 1.545582 CCCATGCATCCAAACTTTCGT 59.454 47.619 0.00 0.00 0.00 3.85
103 104 2.598589 CCATGCATCCAAACTTTCGTG 58.401 47.619 0.00 0.00 0.00 4.35
104 105 2.030007 CCATGCATCCAAACTTTCGTGT 60.030 45.455 0.00 0.00 0.00 4.49
105 106 3.236816 CATGCATCCAAACTTTCGTGTC 58.763 45.455 0.00 0.00 0.00 3.67
106 107 1.262950 TGCATCCAAACTTTCGTGTCG 59.737 47.619 0.00 0.00 0.00 4.35
107 108 1.950472 CATCCAAACTTTCGTGTCGC 58.050 50.000 0.00 0.00 0.00 5.19
108 109 0.511221 ATCCAAACTTTCGTGTCGCG 59.489 50.000 0.00 0.00 43.01 5.87
109 110 1.721133 CCAAACTTTCGTGTCGCGC 60.721 57.895 0.00 0.00 41.07 6.86
110 111 1.721133 CAAACTTTCGTGTCGCGCC 60.721 57.895 0.00 0.00 41.07 6.53
111 112 2.174969 AAACTTTCGTGTCGCGCCA 61.175 52.632 0.00 0.00 41.07 5.69
112 113 2.369477 AAACTTTCGTGTCGCGCCAC 62.369 55.000 10.80 10.80 41.07 5.01
113 114 4.072088 CTTTCGTGTCGCGCCACC 62.072 66.667 15.38 0.00 41.07 4.61
114 115 4.595538 TTTCGTGTCGCGCCACCT 62.596 61.111 15.38 0.00 41.07 4.00
133 134 2.098871 CATGCGTGCATCCGTGTG 59.901 61.111 3.96 0.00 33.90 3.82
134 135 2.358615 ATGCGTGCATCCGTGTGT 60.359 55.556 0.51 0.00 29.42 3.72
135 136 1.079474 ATGCGTGCATCCGTGTGTA 60.079 52.632 0.51 0.00 29.42 2.90
136 137 1.358725 ATGCGTGCATCCGTGTGTAC 61.359 55.000 0.51 0.00 29.42 2.90
137 138 2.736682 GCGTGCATCCGTGTGTACC 61.737 63.158 0.00 0.00 31.98 3.34
138 139 2.098233 CGTGCATCCGTGTGTACCC 61.098 63.158 0.00 0.00 31.98 3.69
139 140 1.743995 GTGCATCCGTGTGTACCCC 60.744 63.158 0.00 0.00 0.00 4.95
140 141 2.124860 GCATCCGTGTGTACCCCC 60.125 66.667 0.00 0.00 0.00 5.40
141 142 2.666098 GCATCCGTGTGTACCCCCT 61.666 63.158 0.00 0.00 0.00 4.79
142 143 1.332144 GCATCCGTGTGTACCCCCTA 61.332 60.000 0.00 0.00 0.00 3.53
143 144 0.462789 CATCCGTGTGTACCCCCTAC 59.537 60.000 0.00 0.00 0.00 3.18
144 145 0.688749 ATCCGTGTGTACCCCCTACC 60.689 60.000 0.00 0.00 0.00 3.18
145 146 2.361567 CCGTGTGTACCCCCTACCC 61.362 68.421 0.00 0.00 0.00 3.69
146 147 1.305549 CGTGTGTACCCCCTACCCT 60.306 63.158 0.00 0.00 0.00 4.34
147 148 0.033208 CGTGTGTACCCCCTACCCTA 60.033 60.000 0.00 0.00 0.00 3.53
148 149 1.412074 CGTGTGTACCCCCTACCCTAT 60.412 57.143 0.00 0.00 0.00 2.57
149 150 2.158475 CGTGTGTACCCCCTACCCTATA 60.158 54.545 0.00 0.00 0.00 1.31
150 151 3.501019 CGTGTGTACCCCCTACCCTATAT 60.501 52.174 0.00 0.00 0.00 0.86
151 152 3.836562 GTGTGTACCCCCTACCCTATATG 59.163 52.174 0.00 0.00 0.00 1.78
152 153 2.836372 GTGTACCCCCTACCCTATATGC 59.164 54.545 0.00 0.00 0.00 3.14
153 154 2.455555 TGTACCCCCTACCCTATATGCA 59.544 50.000 0.00 0.00 0.00 3.96
154 155 2.040342 ACCCCCTACCCTATATGCAC 57.960 55.000 0.00 0.00 0.00 4.57
155 156 1.286248 CCCCCTACCCTATATGCACC 58.714 60.000 0.00 0.00 0.00 5.01
156 157 1.203440 CCCCCTACCCTATATGCACCT 60.203 57.143 0.00 0.00 0.00 4.00
157 158 2.188817 CCCCTACCCTATATGCACCTC 58.811 57.143 0.00 0.00 0.00 3.85
158 159 2.188817 CCCTACCCTATATGCACCTCC 58.811 57.143 0.00 0.00 0.00 4.30
159 160 1.825474 CCTACCCTATATGCACCTCCG 59.175 57.143 0.00 0.00 0.00 4.63
160 161 2.556782 CCTACCCTATATGCACCTCCGA 60.557 54.545 0.00 0.00 0.00 4.55
161 162 1.633774 ACCCTATATGCACCTCCGAG 58.366 55.000 0.00 0.00 0.00 4.63
162 163 1.147191 ACCCTATATGCACCTCCGAGA 59.853 52.381 0.00 0.00 0.00 4.04
163 164 1.821753 CCCTATATGCACCTCCGAGAG 59.178 57.143 0.00 0.00 0.00 3.20
164 165 2.555448 CCCTATATGCACCTCCGAGAGA 60.555 54.545 0.00 0.00 0.00 3.10
165 166 2.490115 CCTATATGCACCTCCGAGAGAC 59.510 54.545 0.00 0.00 0.00 3.36
166 167 2.373335 ATATGCACCTCCGAGAGACT 57.627 50.000 0.00 0.00 0.00 3.24
167 168 1.393603 TATGCACCTCCGAGAGACTG 58.606 55.000 0.00 0.22 0.00 3.51
168 169 0.323816 ATGCACCTCCGAGAGACTGA 60.324 55.000 0.00 0.00 0.00 3.41
169 170 0.539669 TGCACCTCCGAGAGACTGAA 60.540 55.000 0.00 0.00 0.00 3.02
170 171 0.109039 GCACCTCCGAGAGACTGAAC 60.109 60.000 0.00 0.00 0.00 3.18
171 172 0.528470 CACCTCCGAGAGACTGAACC 59.472 60.000 0.00 0.00 0.00 3.62
172 173 0.961358 ACCTCCGAGAGACTGAACCG 60.961 60.000 0.00 0.00 0.00 4.44
173 174 0.677098 CCTCCGAGAGACTGAACCGA 60.677 60.000 0.00 0.00 0.00 4.69
174 175 0.448593 CTCCGAGAGACTGAACCGAC 59.551 60.000 0.00 0.00 0.00 4.79
175 176 0.250597 TCCGAGAGACTGAACCGACA 60.251 55.000 0.00 0.00 0.00 4.35
176 177 0.811915 CCGAGAGACTGAACCGACAT 59.188 55.000 0.00 0.00 0.00 3.06
177 178 2.014857 CCGAGAGACTGAACCGACATA 58.985 52.381 0.00 0.00 0.00 2.29
178 179 2.619177 CCGAGAGACTGAACCGACATAT 59.381 50.000 0.00 0.00 0.00 1.78
179 180 3.304123 CCGAGAGACTGAACCGACATATC 60.304 52.174 0.00 0.00 0.00 1.63
180 181 3.312697 CGAGAGACTGAACCGACATATCA 59.687 47.826 0.00 0.00 0.00 2.15
181 182 4.023622 CGAGAGACTGAACCGACATATCAT 60.024 45.833 0.00 0.00 0.00 2.45
182 183 5.446143 AGAGACTGAACCGACATATCATC 57.554 43.478 0.00 0.00 0.00 2.92
183 184 5.136828 AGAGACTGAACCGACATATCATCT 58.863 41.667 0.00 0.00 0.00 2.90
184 185 5.596361 AGAGACTGAACCGACATATCATCTT 59.404 40.000 0.00 0.00 0.00 2.40
185 186 5.595885 AGACTGAACCGACATATCATCTTG 58.404 41.667 0.00 0.00 0.00 3.02
186 187 5.360999 AGACTGAACCGACATATCATCTTGA 59.639 40.000 0.00 0.00 0.00 3.02
187 188 5.595885 ACTGAACCGACATATCATCTTGAG 58.404 41.667 0.00 0.00 0.00 3.02
188 189 5.360999 ACTGAACCGACATATCATCTTGAGA 59.639 40.000 0.00 0.00 0.00 3.27
189 190 6.041409 ACTGAACCGACATATCATCTTGAGAT 59.959 38.462 0.00 0.00 34.56 2.75
190 191 6.820335 TGAACCGACATATCATCTTGAGATT 58.180 36.000 0.00 0.00 31.21 2.40
191 192 7.275183 TGAACCGACATATCATCTTGAGATTT 58.725 34.615 0.00 0.00 31.21 2.17
192 193 8.421002 TGAACCGACATATCATCTTGAGATTTA 58.579 33.333 0.00 0.00 31.21 1.40
193 194 8.594881 AACCGACATATCATCTTGAGATTTAC 57.405 34.615 0.00 0.00 31.21 2.01
194 195 7.726216 ACCGACATATCATCTTGAGATTTACA 58.274 34.615 0.00 0.00 31.21 2.41
195 196 8.204160 ACCGACATATCATCTTGAGATTTACAA 58.796 33.333 0.00 0.00 31.21 2.41
196 197 9.045223 CCGACATATCATCTTGAGATTTACAAA 57.955 33.333 0.00 0.00 31.21 2.83
202 203 7.672983 TCATCTTGAGATTTACAAAGTCACC 57.327 36.000 0.00 0.00 31.21 4.02
203 204 6.368791 TCATCTTGAGATTTACAAAGTCACCG 59.631 38.462 0.00 0.00 31.21 4.94
204 205 5.607477 TCTTGAGATTTACAAAGTCACCGT 58.393 37.500 0.00 0.00 0.00 4.83
205 206 6.751157 TCTTGAGATTTACAAAGTCACCGTA 58.249 36.000 0.00 0.00 0.00 4.02
206 207 6.866770 TCTTGAGATTTACAAAGTCACCGTAG 59.133 38.462 0.00 0.00 0.00 3.51
219 220 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
220 221 3.807538 GTAGGCGCCTCGTCGTCA 61.808 66.667 36.73 11.30 36.23 4.35
221 222 3.057548 TAGGCGCCTCGTCGTCAA 61.058 61.111 36.73 10.36 36.23 3.18
222 223 3.332493 TAGGCGCCTCGTCGTCAAC 62.332 63.158 36.73 0.00 36.23 3.18
240 241 2.260743 GGGAACGTCTCGTCCCAC 59.739 66.667 16.67 4.03 35.50 4.61
241 242 2.273912 GGGAACGTCTCGTCCCACT 61.274 63.158 16.67 0.00 35.50 4.00
242 243 1.080705 GGAACGTCTCGTCCCACTG 60.081 63.158 0.00 0.00 39.99 3.66
243 244 1.521450 GGAACGTCTCGTCCCACTGA 61.521 60.000 0.00 0.00 39.99 3.41
244 245 0.313043 GAACGTCTCGTCCCACTGAA 59.687 55.000 0.00 0.00 39.99 3.02
245 246 0.748450 AACGTCTCGTCCCACTGAAA 59.252 50.000 0.00 0.00 39.99 2.69
246 247 0.314302 ACGTCTCGTCCCACTGAAAG 59.686 55.000 0.00 0.00 33.69 2.62
247 248 0.388649 CGTCTCGTCCCACTGAAAGG 60.389 60.000 0.00 0.00 39.30 3.11
248 249 0.670854 GTCTCGTCCCACTGAAAGGC 60.671 60.000 0.00 0.00 39.30 4.35
249 250 1.118965 TCTCGTCCCACTGAAAGGCA 61.119 55.000 0.00 0.00 39.30 4.75
250 251 0.036010 CTCGTCCCACTGAAAGGCAT 60.036 55.000 0.00 0.00 39.30 4.40
251 252 0.036388 TCGTCCCACTGAAAGGCATC 60.036 55.000 0.00 0.00 39.30 3.91
252 253 1.361668 CGTCCCACTGAAAGGCATCG 61.362 60.000 0.00 0.00 39.30 3.84
253 254 1.377202 TCCCACTGAAAGGCATCGC 60.377 57.895 0.00 0.00 39.30 4.58
273 274 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
274 275 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
275 276 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
276 277 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
277 278 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
278 279 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
279 280 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
280 281 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
281 282 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
282 283 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
283 284 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
284 285 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
285 286 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
296 297 3.409856 CGCATCGCCGGAAATTCT 58.590 55.556 5.05 0.00 0.00 2.40
297 298 2.600388 CGCATCGCCGGAAATTCTA 58.400 52.632 5.05 0.00 0.00 2.10
298 299 0.934496 CGCATCGCCGGAAATTCTAA 59.066 50.000 5.05 0.00 0.00 2.10
299 300 1.329292 CGCATCGCCGGAAATTCTAAA 59.671 47.619 5.05 0.00 0.00 1.85
300 301 2.032030 CGCATCGCCGGAAATTCTAAAT 60.032 45.455 5.05 0.00 0.00 1.40
301 302 3.185594 CGCATCGCCGGAAATTCTAAATA 59.814 43.478 5.05 0.00 0.00 1.40
302 303 4.319190 CGCATCGCCGGAAATTCTAAATAA 60.319 41.667 5.05 0.00 0.00 1.40
303 304 5.516090 GCATCGCCGGAAATTCTAAATAAA 58.484 37.500 5.05 0.00 0.00 1.40
304 305 6.149633 GCATCGCCGGAAATTCTAAATAAAT 58.850 36.000 5.05 0.00 0.00 1.40
305 306 6.305638 GCATCGCCGGAAATTCTAAATAAATC 59.694 38.462 5.05 0.00 0.00 2.17
306 307 6.308371 TCGCCGGAAATTCTAAATAAATCC 57.692 37.500 5.05 0.00 0.00 3.01
307 308 5.823570 TCGCCGGAAATTCTAAATAAATCCA 59.176 36.000 5.05 0.00 0.00 3.41
308 309 6.017440 TCGCCGGAAATTCTAAATAAATCCAG 60.017 38.462 5.05 0.00 0.00 3.86
309 310 6.017440 CGCCGGAAATTCTAAATAAATCCAGA 60.017 38.462 5.05 0.00 0.00 3.86
310 311 7.468084 CGCCGGAAATTCTAAATAAATCCAGAA 60.468 37.037 5.05 0.00 0.00 3.02
311 312 8.194769 GCCGGAAATTCTAAATAAATCCAGAAA 58.805 33.333 5.05 0.00 31.25 2.52
321 322 9.334693 CTAAATAAATCCAGAAATAATGCGAGC 57.665 33.333 0.00 0.00 0.00 5.03
322 323 6.882610 ATAAATCCAGAAATAATGCGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
323 324 4.558538 AATCCAGAAATAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
324 325 2.984562 TCCAGAAATAATGCGAGCACA 58.015 42.857 0.00 0.00 0.00 4.57
325 326 2.938451 TCCAGAAATAATGCGAGCACAG 59.062 45.455 0.00 0.00 0.00 3.66
326 327 2.032550 CCAGAAATAATGCGAGCACAGG 59.967 50.000 0.00 0.00 0.00 4.00
327 328 2.938451 CAGAAATAATGCGAGCACAGGA 59.062 45.455 0.00 0.00 0.00 3.86
328 329 2.939103 AGAAATAATGCGAGCACAGGAC 59.061 45.455 0.00 0.00 0.00 3.85
329 330 2.698855 AATAATGCGAGCACAGGACT 57.301 45.000 0.00 0.00 0.00 3.85
330 331 2.698855 ATAATGCGAGCACAGGACTT 57.301 45.000 0.00 0.00 0.00 3.01
331 332 1.725641 TAATGCGAGCACAGGACTTG 58.274 50.000 0.00 0.00 0.00 3.16
332 333 0.035317 AATGCGAGCACAGGACTTGA 59.965 50.000 0.00 0.00 0.00 3.02
333 334 0.035317 ATGCGAGCACAGGACTTGAA 59.965 50.000 0.00 0.00 0.00 2.69
334 335 0.880278 TGCGAGCACAGGACTTGAAC 60.880 55.000 0.00 0.00 0.00 3.18
335 336 1.569479 GCGAGCACAGGACTTGAACC 61.569 60.000 0.00 0.00 0.00 3.62
336 337 0.951040 CGAGCACAGGACTTGAACCC 60.951 60.000 0.00 0.00 0.00 4.11
337 338 0.398318 GAGCACAGGACTTGAACCCT 59.602 55.000 0.00 0.00 0.00 4.34
338 339 1.623811 GAGCACAGGACTTGAACCCTA 59.376 52.381 0.00 0.00 0.00 3.53
339 340 1.625818 AGCACAGGACTTGAACCCTAG 59.374 52.381 0.00 0.00 0.00 3.02
340 341 1.348036 GCACAGGACTTGAACCCTAGT 59.652 52.381 0.00 0.00 0.00 2.57
341 342 2.872038 GCACAGGACTTGAACCCTAGTG 60.872 54.545 0.00 0.00 36.05 2.74
342 343 1.978580 ACAGGACTTGAACCCTAGTGG 59.021 52.381 0.00 0.00 41.37 4.00
370 371 4.748701 GGATACCACTATCCCTCTAACCA 58.251 47.826 0.00 0.00 42.06 3.67
371 372 5.342866 GGATACCACTATCCCTCTAACCAT 58.657 45.833 0.00 0.00 42.06 3.55
372 373 5.422650 GGATACCACTATCCCTCTAACCATC 59.577 48.000 0.00 0.00 42.06 3.51
373 374 3.588569 ACCACTATCCCTCTAACCATCC 58.411 50.000 0.00 0.00 0.00 3.51
374 375 3.051341 ACCACTATCCCTCTAACCATCCA 60.051 47.826 0.00 0.00 0.00 3.41
375 376 3.973973 CCACTATCCCTCTAACCATCCAA 59.026 47.826 0.00 0.00 0.00 3.53
376 377 4.202367 CCACTATCCCTCTAACCATCCAAC 60.202 50.000 0.00 0.00 0.00 3.77
377 378 3.974642 ACTATCCCTCTAACCATCCAACC 59.025 47.826 0.00 0.00 0.00 3.77
378 379 2.352561 TCCCTCTAACCATCCAACCA 57.647 50.000 0.00 0.00 0.00 3.67
379 380 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
380 381 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
381 382 2.356125 CCCTCTAACCATCCAACCACAG 60.356 54.545 0.00 0.00 0.00 3.66
382 383 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
383 384 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
393 394 4.025401 CCACAGGTTGGTTCGCGC 62.025 66.667 0.00 0.00 41.10 6.86
394 395 3.276091 CACAGGTTGGTTCGCGCA 61.276 61.111 8.75 0.00 0.00 6.09
395 396 2.281484 ACAGGTTGGTTCGCGCAT 60.281 55.556 8.75 0.00 0.00 4.73
396 397 2.176546 CAGGTTGGTTCGCGCATG 59.823 61.111 8.75 0.00 0.00 4.06
397 398 2.281484 AGGTTGGTTCGCGCATGT 60.281 55.556 8.75 0.00 0.00 3.21
398 399 1.896660 AGGTTGGTTCGCGCATGTT 60.897 52.632 8.75 0.00 0.00 2.71
399 400 1.007849 GGTTGGTTCGCGCATGTTT 60.008 52.632 8.75 0.00 0.00 2.83
400 401 0.238817 GGTTGGTTCGCGCATGTTTA 59.761 50.000 8.75 0.00 0.00 2.01
401 402 1.602191 GTTGGTTCGCGCATGTTTAG 58.398 50.000 8.75 0.00 0.00 1.85
402 403 0.519519 TTGGTTCGCGCATGTTTAGG 59.480 50.000 8.75 0.00 0.00 2.69
403 404 1.302383 TGGTTCGCGCATGTTTAGGG 61.302 55.000 8.75 0.00 0.00 3.53
404 405 1.427819 GTTCGCGCATGTTTAGGGG 59.572 57.895 8.75 0.00 0.00 4.79
405 406 1.747367 TTCGCGCATGTTTAGGGGG 60.747 57.895 8.75 0.00 0.00 5.40
406 407 3.887868 CGCGCATGTTTAGGGGGC 61.888 66.667 8.75 0.00 37.16 5.80
407 408 2.440247 GCGCATGTTTAGGGGGCT 60.440 61.111 0.30 0.00 37.49 5.19
408 409 2.774799 GCGCATGTTTAGGGGGCTG 61.775 63.158 0.30 0.00 37.49 4.85
409 410 2.774799 CGCATGTTTAGGGGGCTGC 61.775 63.158 0.00 0.00 0.00 5.25
410 411 1.380380 GCATGTTTAGGGGGCTGCT 60.380 57.895 0.00 0.00 0.00 4.24
411 412 1.669999 GCATGTTTAGGGGGCTGCTG 61.670 60.000 0.00 0.00 0.00 4.41
412 413 0.034186 CATGTTTAGGGGGCTGCTGA 60.034 55.000 0.00 0.00 0.00 4.26
413 414 0.034089 ATGTTTAGGGGGCTGCTGAC 60.034 55.000 0.00 0.00 0.00 3.51
414 415 1.133809 TGTTTAGGGGGCTGCTGACT 61.134 55.000 0.00 0.00 0.00 3.41
415 416 0.909623 GTTTAGGGGGCTGCTGACTA 59.090 55.000 0.00 0.00 0.00 2.59
416 417 0.909623 TTTAGGGGGCTGCTGACTAC 59.090 55.000 0.00 0.00 0.00 2.73
417 418 0.042731 TTAGGGGGCTGCTGACTACT 59.957 55.000 0.00 0.00 0.00 2.57
418 419 0.687757 TAGGGGGCTGCTGACTACTG 60.688 60.000 0.00 0.00 0.00 2.74
419 420 2.124942 GGGGCTGCTGACTACTGC 60.125 66.667 0.00 0.00 40.53 4.40
420 421 2.665000 GGGCTGCTGACTACTGCA 59.335 61.111 0.00 0.00 45.81 4.41
421 422 1.222936 GGGCTGCTGACTACTGCAT 59.777 57.895 0.00 0.00 46.49 3.96
422 423 0.813210 GGGCTGCTGACTACTGCATC 60.813 60.000 0.00 0.00 46.49 3.91
423 424 0.107993 GGCTGCTGACTACTGCATCA 60.108 55.000 0.00 0.00 46.49 3.07
424 425 1.676916 GGCTGCTGACTACTGCATCAA 60.677 52.381 0.00 0.00 46.49 2.57
425 426 1.664659 GCTGCTGACTACTGCATCAAG 59.335 52.381 0.00 0.00 46.49 3.02
426 427 2.934364 GCTGCTGACTACTGCATCAAGT 60.934 50.000 0.00 0.00 46.49 3.16
427 428 3.332919 CTGCTGACTACTGCATCAAGTT 58.667 45.455 0.00 0.00 46.49 2.66
428 429 3.069289 TGCTGACTACTGCATCAAGTTG 58.931 45.455 0.00 0.00 43.83 3.16
429 430 3.070018 GCTGACTACTGCATCAAGTTGT 58.930 45.455 2.11 0.00 38.57 3.32
430 431 3.499918 GCTGACTACTGCATCAAGTTGTT 59.500 43.478 2.11 0.00 36.47 2.83
431 432 4.612259 GCTGACTACTGCATCAAGTTGTTG 60.612 45.833 9.21 9.21 36.47 3.33
432 433 4.702831 TGACTACTGCATCAAGTTGTTGA 58.297 39.130 16.44 2.99 46.81 3.18
433 434 5.122519 TGACTACTGCATCAAGTTGTTGAA 58.877 37.500 16.44 6.30 45.88 2.69
434 435 5.007626 TGACTACTGCATCAAGTTGTTGAAC 59.992 40.000 16.44 2.22 45.88 3.18
435 436 3.338818 ACTGCATCAAGTTGTTGAACG 57.661 42.857 16.44 6.95 45.88 3.95
436 437 2.682856 ACTGCATCAAGTTGTTGAACGT 59.317 40.909 16.44 7.47 45.88 3.99
437 438 3.242739 ACTGCATCAAGTTGTTGAACGTC 60.243 43.478 16.44 0.96 45.88 4.34
438 439 2.032799 TGCATCAAGTTGTTGAACGTCC 59.967 45.455 16.44 0.35 45.88 4.79
439 440 2.604614 GCATCAAGTTGTTGAACGTCCC 60.605 50.000 16.44 0.00 45.88 4.46
440 441 2.702592 TCAAGTTGTTGAACGTCCCT 57.297 45.000 2.11 0.00 39.85 4.20
441 442 2.993937 TCAAGTTGTTGAACGTCCCTT 58.006 42.857 2.11 0.00 39.85 3.95
442 443 4.139859 TCAAGTTGTTGAACGTCCCTTA 57.860 40.909 2.11 0.00 39.85 2.69
443 444 4.515361 TCAAGTTGTTGAACGTCCCTTAA 58.485 39.130 2.11 0.00 39.85 1.85
444 445 4.942483 TCAAGTTGTTGAACGTCCCTTAAA 59.058 37.500 2.11 0.00 39.85 1.52
445 446 5.415077 TCAAGTTGTTGAACGTCCCTTAAAA 59.585 36.000 2.11 0.00 39.85 1.52
446 447 5.900865 AGTTGTTGAACGTCCCTTAAAAA 57.099 34.783 0.00 0.00 37.15 1.94
475 477 6.867662 ACTTGTTGAACAGTAGATTTCAGG 57.132 37.500 4.18 0.00 33.36 3.86
486 488 5.352569 CAGTAGATTTCAGGTGCAAGGTAAG 59.647 44.000 0.00 0.00 0.00 2.34
539 541 2.152830 TGCAATGCTTTCCAAAATGGC 58.847 42.857 6.82 0.00 37.47 4.40
618 1610 6.140968 AGTCCTAGCCTTTAGGTTTTCAAT 57.859 37.500 0.00 0.00 37.57 2.57
625 1617 5.360999 AGCCTTTAGGTTTTCAATATGGAGC 59.639 40.000 0.00 0.00 37.57 4.70
775 1802 0.323725 AGCCGGCACAAATCCATTCT 60.324 50.000 31.54 0.00 0.00 2.40
832 1859 0.040958 CAGTGCCAAGAAACTGCGAC 60.041 55.000 0.00 0.00 37.58 5.19
869 1909 4.524869 CCGCGTAGGTTGGCATAA 57.475 55.556 4.92 0.00 34.51 1.90
870 1910 3.000815 CCGCGTAGGTTGGCATAAT 57.999 52.632 4.92 0.00 34.51 1.28
871 1911 1.305201 CCGCGTAGGTTGGCATAATT 58.695 50.000 4.92 0.00 34.51 1.40
919 1962 4.446413 GTCCGGTAGGGTGCCACG 62.446 72.222 0.00 0.00 38.33 4.94
953 2025 1.677966 CACCTTCCAGCAGCAGCAT 60.678 57.895 3.17 0.00 45.49 3.79
962 2034 2.164827 CCAGCAGCAGCATCATAACAAA 59.835 45.455 3.17 0.00 45.49 2.83
995 2088 3.745803 GCACTTGGAGCAGCAGCC 61.746 66.667 0.00 0.00 43.56 4.85
1074 2170 3.943691 CGGTTCCACCCCACGGAA 61.944 66.667 0.00 0.00 40.26 4.30
1113 2209 4.421479 CTCTCCCGCGTCGCACTT 62.421 66.667 18.75 0.00 0.00 3.16
1158 2254 2.799126 TCGGCACCCTCAACATTTAT 57.201 45.000 0.00 0.00 0.00 1.40
1233 2407 2.443416 TCGATCGATCCGGGATATGTT 58.557 47.619 19.51 0.87 0.00 2.71
1242 2416 1.667236 CGGGATATGTTTGAGCAGCA 58.333 50.000 0.00 0.00 0.00 4.41
1269 2444 7.389884 AGCTGATGATATTTGTGTGTGGATATC 59.610 37.037 0.00 0.00 33.92 1.63
1280 2455 2.376063 TGGATATCCAGGGATGGCG 58.624 57.895 20.98 0.00 42.01 5.69
1382 2557 2.998097 CGGGGATTCTGGAAGGCA 59.002 61.111 0.00 0.00 0.00 4.75
1403 2578 2.766651 GGGTCGGACAGGGCCATA 60.767 66.667 6.18 0.00 0.00 2.74
1523 2698 2.050350 CGAGTACCGCCTCCCTGAA 61.050 63.158 0.00 0.00 0.00 3.02
1568 2749 1.596752 CACGGTGCTGTGCAAGGTA 60.597 57.895 0.00 0.00 41.47 3.08
1757 2968 2.192263 GACAACTTCCTGATCCCCTCT 58.808 52.381 0.00 0.00 0.00 3.69
1759 2970 2.573915 ACAACTTCCTGATCCCCTCTTC 59.426 50.000 0.00 0.00 0.00 2.87
1760 2971 1.886422 ACTTCCTGATCCCCTCTTCC 58.114 55.000 0.00 0.00 0.00 3.46
1761 2972 1.135960 CTTCCTGATCCCCTCTTCCC 58.864 60.000 0.00 0.00 0.00 3.97
1872 3101 3.705638 TCGCGTCGACGTCGTCTT 61.706 61.111 35.19 0.00 42.22 3.01
1908 3137 2.599597 CCCCCTTCCATCTGCAGG 59.400 66.667 15.13 0.00 0.00 4.85
1932 3161 4.263572 CCGTGAACCCACCCTGCA 62.264 66.667 0.00 0.00 40.12 4.41
1935 3164 3.497115 TGAACCCACCCTGCAGCA 61.497 61.111 8.66 0.00 0.00 4.41
1941 3170 2.353958 CACCCTGCAGCATCCAGT 59.646 61.111 8.66 0.00 0.00 4.00
1956 3185 3.688159 AGTTACCGGCGGCGAACT 61.688 61.111 30.50 30.50 30.43 3.01
1978 3207 1.376609 GGGATGCCGAACATGTCCAC 61.377 60.000 0.00 0.00 39.84 4.02
2130 3359 1.389609 CCAGCATTGCATGTCCCCTC 61.390 60.000 11.91 0.00 0.00 4.30
2141 3370 2.285368 TCCCCTCACGCCCATCTT 60.285 61.111 0.00 0.00 0.00 2.40
2204 3441 6.230472 TGCAAAACTTGAAGCAGAGTAGATA 58.770 36.000 0.00 0.00 32.48 1.98
2209 3446 8.989653 AAACTTGAAGCAGAGTAGATAGTTAC 57.010 34.615 0.00 0.00 0.00 2.50
2251 6154 1.093159 CACTACGAACCTAGACGCCT 58.907 55.000 0.00 0.00 0.00 5.52
2295 6201 4.218417 AGTTTGTAACTAAGCCTGCAATGG 59.782 41.667 0.00 0.00 40.69 3.16
2377 6318 1.843368 ATCAAGAATGCCTGTGGTGG 58.157 50.000 0.00 0.00 0.00 4.61
2391 6333 4.702131 CCTGTGGTGGGAATAAGAAAGAAG 59.298 45.833 0.00 0.00 0.00 2.85
2441 6391 7.675962 TGTTTTAGACATTAAAGCGGTATGT 57.324 32.000 1.29 1.29 35.33 2.29
2442 6392 7.523219 TGTTTTAGACATTAAAGCGGTATGTG 58.477 34.615 6.24 0.00 32.94 3.21
2443 6393 7.388224 TGTTTTAGACATTAAAGCGGTATGTGA 59.612 33.333 6.24 0.00 32.94 3.58
2444 6394 7.534085 TTTAGACATTAAAGCGGTATGTGAG 57.466 36.000 6.24 0.00 32.94 3.51
2445 6395 4.442706 AGACATTAAAGCGGTATGTGAGG 58.557 43.478 6.24 0.00 32.94 3.86
2446 6396 4.161565 AGACATTAAAGCGGTATGTGAGGA 59.838 41.667 6.24 0.00 32.94 3.71
2447 6397 4.839121 ACATTAAAGCGGTATGTGAGGAA 58.161 39.130 0.89 0.00 31.66 3.36
2448 6398 4.876107 ACATTAAAGCGGTATGTGAGGAAG 59.124 41.667 0.89 0.00 31.66 3.46
2449 6399 2.403252 AAAGCGGTATGTGAGGAAGG 57.597 50.000 0.00 0.00 0.00 3.46
2450 6400 0.541863 AAGCGGTATGTGAGGAAGGG 59.458 55.000 0.00 0.00 0.00 3.95
2451 6401 0.325296 AGCGGTATGTGAGGAAGGGA 60.325 55.000 0.00 0.00 0.00 4.20
2452 6402 0.105039 GCGGTATGTGAGGAAGGGAG 59.895 60.000 0.00 0.00 0.00 4.30
2453 6403 1.776662 CGGTATGTGAGGAAGGGAGA 58.223 55.000 0.00 0.00 0.00 3.71
2454 6404 2.320781 CGGTATGTGAGGAAGGGAGAT 58.679 52.381 0.00 0.00 0.00 2.75
2455 6405 3.497332 CGGTATGTGAGGAAGGGAGATA 58.503 50.000 0.00 0.00 0.00 1.98
2456 6406 3.895656 CGGTATGTGAGGAAGGGAGATAA 59.104 47.826 0.00 0.00 0.00 1.75
2457 6407 4.262079 CGGTATGTGAGGAAGGGAGATAAC 60.262 50.000 0.00 0.00 0.00 1.89
2458 6408 4.654262 GGTATGTGAGGAAGGGAGATAACA 59.346 45.833 0.00 0.00 0.00 2.41
2459 6409 5.130477 GGTATGTGAGGAAGGGAGATAACAA 59.870 44.000 0.00 0.00 0.00 2.83
2460 6410 4.553330 TGTGAGGAAGGGAGATAACAAC 57.447 45.455 0.00 0.00 0.00 3.32
2461 6411 3.907474 TGTGAGGAAGGGAGATAACAACA 59.093 43.478 0.00 0.00 0.00 3.33
2462 6412 4.349636 TGTGAGGAAGGGAGATAACAACAA 59.650 41.667 0.00 0.00 0.00 2.83
2463 6413 5.014123 TGTGAGGAAGGGAGATAACAACAAT 59.986 40.000 0.00 0.00 0.00 2.71
2464 6414 5.355350 GTGAGGAAGGGAGATAACAACAATG 59.645 44.000 0.00 0.00 0.00 2.82
2465 6415 5.014123 TGAGGAAGGGAGATAACAACAATGT 59.986 40.000 0.00 0.00 43.14 2.71
2514 6464 2.245159 TCCATCTGATCGTGAATGGC 57.755 50.000 9.45 0.00 0.00 4.40
2567 6517 2.159379 GGAACGATGAGGAAACCATTGC 60.159 50.000 0.00 0.00 0.00 3.56
2574 6524 2.573340 GAAACCATTGCGGGCCAG 59.427 61.111 4.39 0.00 40.22 4.85
2627 6577 0.381801 AAGCAGTTGTTTGGAGCACG 59.618 50.000 0.00 0.00 0.00 5.34
2630 6580 1.528309 AGTTGTTTGGAGCACGGGG 60.528 57.895 0.00 0.00 0.00 5.73
2672 6622 2.871096 AGGGGATCGCAACAGTTTTA 57.129 45.000 12.32 0.00 0.00 1.52
2682 6632 3.678548 CGCAACAGTTTTAGAGGGTAGAC 59.321 47.826 0.00 0.00 0.00 2.59
2828 6778 9.141400 GTAGCAAAGTAATATGATAGTAGTGGC 57.859 37.037 4.50 4.50 0.00 5.01
2833 6783 7.286215 AGTAATATGATAGTAGTGGCAACGT 57.714 36.000 0.00 0.00 42.51 3.99
2844 6794 4.023739 AGTGGCAACGTTAACAAAAGTC 57.976 40.909 0.00 0.00 42.51 3.01
2857 6807 8.480853 CGTTAACAAAAGTCAAGACAACAAAAA 58.519 29.630 6.39 0.00 0.00 1.94
2948 6898 1.274167 TGGAAAACTCGTAGGCATCGT 59.726 47.619 0.00 0.00 0.00 3.73
3019 6969 3.685139 ACATAGGGTGACACAGAACTG 57.315 47.619 8.08 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.793861 CGTTTGCTAGCTAACGGCAA 59.206 50.000 39.06 15.99 45.85 4.52
1 2 2.451693 CGTTTGCTAGCTAACGGCA 58.548 52.632 39.06 11.04 45.85 5.69
6 7 2.773487 TCTTTGCCGTTTGCTAGCTAA 58.227 42.857 17.23 12.28 42.00 3.09
7 8 2.465860 TCTTTGCCGTTTGCTAGCTA 57.534 45.000 17.23 5.31 42.00 3.32
8 9 1.740025 GATCTTTGCCGTTTGCTAGCT 59.260 47.619 17.23 0.00 42.00 3.32
9 10 1.740025 AGATCTTTGCCGTTTGCTAGC 59.260 47.619 8.10 8.10 42.00 3.42
10 11 3.001736 GCTAGATCTTTGCCGTTTGCTAG 59.998 47.826 0.00 0.00 42.00 3.42
11 12 2.936498 GCTAGATCTTTGCCGTTTGCTA 59.064 45.455 0.00 0.00 42.00 3.49
12 13 1.740025 GCTAGATCTTTGCCGTTTGCT 59.260 47.619 0.00 0.00 42.00 3.91
13 14 1.740025 AGCTAGATCTTTGCCGTTTGC 59.260 47.619 0.00 0.00 41.77 3.68
14 15 3.002791 TCAGCTAGATCTTTGCCGTTTG 58.997 45.455 0.00 1.24 0.00 2.93
15 16 3.003480 GTCAGCTAGATCTTTGCCGTTT 58.997 45.455 0.00 0.00 0.00 3.60
16 17 2.622436 GTCAGCTAGATCTTTGCCGTT 58.378 47.619 0.00 0.00 0.00 4.44
17 18 1.469940 CGTCAGCTAGATCTTTGCCGT 60.470 52.381 0.00 0.00 0.00 5.68
18 19 1.203928 CGTCAGCTAGATCTTTGCCG 58.796 55.000 0.00 0.00 0.00 5.69
19 20 1.576356 CCGTCAGCTAGATCTTTGCC 58.424 55.000 0.00 0.00 0.00 4.52
20 21 0.933796 GCCGTCAGCTAGATCTTTGC 59.066 55.000 0.00 6.41 38.99 3.68
21 22 2.299993 TGCCGTCAGCTAGATCTTTG 57.700 50.000 0.00 0.00 44.23 2.77
22 23 3.055819 TCTTTGCCGTCAGCTAGATCTTT 60.056 43.478 0.00 0.00 44.23 2.52
23 24 2.497675 TCTTTGCCGTCAGCTAGATCTT 59.502 45.455 0.00 0.00 44.23 2.40
24 25 2.103373 TCTTTGCCGTCAGCTAGATCT 58.897 47.619 0.00 0.00 44.23 2.75
25 26 2.586258 TCTTTGCCGTCAGCTAGATC 57.414 50.000 0.00 0.00 44.23 2.75
26 27 2.224161 GGATCTTTGCCGTCAGCTAGAT 60.224 50.000 0.00 0.00 42.50 1.98
27 28 1.137086 GGATCTTTGCCGTCAGCTAGA 59.863 52.381 0.00 0.00 44.23 2.43
28 29 1.137872 AGGATCTTTGCCGTCAGCTAG 59.862 52.381 0.00 0.00 44.23 3.42
29 30 1.134699 CAGGATCTTTGCCGTCAGCTA 60.135 52.381 0.00 0.00 44.23 3.32
30 31 0.392193 CAGGATCTTTGCCGTCAGCT 60.392 55.000 0.00 0.00 44.23 4.24
31 32 0.391661 TCAGGATCTTTGCCGTCAGC 60.392 55.000 0.00 0.00 44.14 4.26
32 33 2.322355 ATCAGGATCTTTGCCGTCAG 57.678 50.000 0.00 0.00 0.00 3.51
33 34 2.632377 GAATCAGGATCTTTGCCGTCA 58.368 47.619 0.00 0.00 0.00 4.35
34 35 1.943340 GGAATCAGGATCTTTGCCGTC 59.057 52.381 0.00 0.00 0.00 4.79
35 36 1.281867 TGGAATCAGGATCTTTGCCGT 59.718 47.619 0.00 0.00 0.00 5.68
36 37 1.945394 CTGGAATCAGGATCTTTGCCG 59.055 52.381 0.00 0.00 37.36 5.69
37 38 3.010200 ACTGGAATCAGGATCTTTGCC 57.990 47.619 0.00 0.00 44.99 4.52
38 39 4.574013 CACTACTGGAATCAGGATCTTTGC 59.426 45.833 0.00 0.00 44.99 3.68
39 40 5.583854 CACACTACTGGAATCAGGATCTTTG 59.416 44.000 0.00 0.00 44.99 2.77
40 41 5.485353 TCACACTACTGGAATCAGGATCTTT 59.515 40.000 0.00 0.00 44.99 2.52
41 42 5.026121 TCACACTACTGGAATCAGGATCTT 58.974 41.667 0.00 0.00 44.99 2.40
42 43 4.614475 TCACACTACTGGAATCAGGATCT 58.386 43.478 0.00 0.00 44.99 2.75
43 44 4.646945 TCTCACACTACTGGAATCAGGATC 59.353 45.833 0.00 0.00 44.99 3.36
44 45 4.404073 GTCTCACACTACTGGAATCAGGAT 59.596 45.833 0.00 0.00 44.99 3.24
45 46 3.764434 GTCTCACACTACTGGAATCAGGA 59.236 47.826 0.00 0.00 44.99 3.86
46 47 3.118956 GGTCTCACACTACTGGAATCAGG 60.119 52.174 0.00 0.00 44.99 3.86
47 48 3.428180 CGGTCTCACACTACTGGAATCAG 60.428 52.174 0.00 0.00 46.10 2.90
48 49 2.492088 CGGTCTCACACTACTGGAATCA 59.508 50.000 0.00 0.00 0.00 2.57
49 50 2.753452 TCGGTCTCACACTACTGGAATC 59.247 50.000 0.00 0.00 0.00 2.52
50 51 2.803956 TCGGTCTCACACTACTGGAAT 58.196 47.619 0.00 0.00 0.00 3.01
51 52 2.281539 TCGGTCTCACACTACTGGAA 57.718 50.000 0.00 0.00 0.00 3.53
52 53 2.509166 ATCGGTCTCACACTACTGGA 57.491 50.000 0.00 0.00 0.00 3.86
53 54 3.056821 TGAAATCGGTCTCACACTACTGG 60.057 47.826 0.00 0.00 0.00 4.00
54 55 4.174411 TGAAATCGGTCTCACACTACTG 57.826 45.455 0.00 0.00 0.00 2.74
55 56 4.748892 CATGAAATCGGTCTCACACTACT 58.251 43.478 0.00 0.00 0.00 2.57
56 57 3.307242 GCATGAAATCGGTCTCACACTAC 59.693 47.826 0.00 0.00 0.00 2.73
57 58 3.521560 GCATGAAATCGGTCTCACACTA 58.478 45.455 0.00 0.00 0.00 2.74
58 59 2.350522 GCATGAAATCGGTCTCACACT 58.649 47.619 0.00 0.00 0.00 3.55
59 60 1.398390 GGCATGAAATCGGTCTCACAC 59.602 52.381 0.00 0.00 0.00 3.82
60 61 1.003003 TGGCATGAAATCGGTCTCACA 59.997 47.619 0.00 0.00 0.00 3.58
61 62 1.737838 TGGCATGAAATCGGTCTCAC 58.262 50.000 0.00 0.00 0.00 3.51
62 63 2.564771 GATGGCATGAAATCGGTCTCA 58.435 47.619 3.81 0.00 0.00 3.27
63 64 1.876156 GGATGGCATGAAATCGGTCTC 59.124 52.381 3.81 0.00 0.00 3.36
64 65 1.477558 GGGATGGCATGAAATCGGTCT 60.478 52.381 3.81 0.00 0.00 3.85
65 66 0.954452 GGGATGGCATGAAATCGGTC 59.046 55.000 3.81 0.00 0.00 4.79
66 67 0.258484 TGGGATGGCATGAAATCGGT 59.742 50.000 3.81 0.00 0.00 4.69
67 68 1.271379 CATGGGATGGCATGAAATCGG 59.729 52.381 3.81 0.00 0.00 4.18
68 69 1.336517 GCATGGGATGGCATGAAATCG 60.337 52.381 3.81 0.00 0.00 3.34
69 70 1.689813 TGCATGGGATGGCATGAAATC 59.310 47.619 3.81 0.00 34.58 2.17
70 71 1.796017 TGCATGGGATGGCATGAAAT 58.204 45.000 3.81 0.00 34.58 2.17
71 72 3.301746 TGCATGGGATGGCATGAAA 57.698 47.368 3.81 0.00 34.58 2.69
76 77 0.325390 TTTGGATGCATGGGATGGCA 60.325 50.000 2.46 0.00 45.23 4.92
77 78 0.105408 GTTTGGATGCATGGGATGGC 59.895 55.000 2.46 0.00 0.00 4.40
78 79 1.784358 AGTTTGGATGCATGGGATGG 58.216 50.000 2.46 0.00 0.00 3.51
79 80 3.735820 CGAAAGTTTGGATGCATGGGATG 60.736 47.826 2.46 0.00 0.00 3.51
80 81 2.428171 CGAAAGTTTGGATGCATGGGAT 59.572 45.455 2.46 0.00 0.00 3.85
81 82 1.818060 CGAAAGTTTGGATGCATGGGA 59.182 47.619 2.46 0.00 0.00 4.37
82 83 1.545582 ACGAAAGTTTGGATGCATGGG 59.454 47.619 2.46 0.00 46.40 4.00
83 84 2.030007 ACACGAAAGTTTGGATGCATGG 60.030 45.455 2.46 0.00 46.40 3.66
84 85 3.236816 GACACGAAAGTTTGGATGCATG 58.763 45.455 2.46 0.00 46.40 4.06
85 86 2.095768 CGACACGAAAGTTTGGATGCAT 60.096 45.455 0.00 0.00 46.40 3.96
86 87 1.262950 CGACACGAAAGTTTGGATGCA 59.737 47.619 4.47 0.00 46.40 3.96
87 88 1.950472 CGACACGAAAGTTTGGATGC 58.050 50.000 4.47 0.00 46.40 3.91
88 89 1.721489 CGCGACACGAAAGTTTGGATG 60.721 52.381 0.00 2.34 46.40 3.51
89 90 0.511221 CGCGACACGAAAGTTTGGAT 59.489 50.000 0.00 0.00 46.40 3.41
90 91 1.928653 CGCGACACGAAAGTTTGGA 59.071 52.632 0.00 0.00 46.40 3.53
91 92 1.721133 GCGCGACACGAAAGTTTGG 60.721 57.895 12.10 0.00 46.40 3.28
92 93 1.721133 GGCGCGACACGAAAGTTTG 60.721 57.895 12.10 0.00 46.40 2.93
93 94 2.174969 TGGCGCGACACGAAAGTTT 61.175 52.632 12.71 0.00 46.40 2.66
94 95 2.586635 TGGCGCGACACGAAAGTT 60.587 55.556 12.71 0.00 46.40 2.66
116 117 1.357991 TACACACGGATGCACGCATG 61.358 55.000 9.70 0.00 36.70 4.06
117 118 1.079474 TACACACGGATGCACGCAT 60.079 52.632 3.71 3.71 39.69 4.73
118 119 2.024868 GTACACACGGATGCACGCA 61.025 57.895 0.00 0.00 37.37 5.24
119 120 2.736682 GGTACACACGGATGCACGC 61.737 63.158 0.00 0.00 37.37 5.34
120 121 2.098233 GGGTACACACGGATGCACG 61.098 63.158 0.00 0.00 40.31 5.34
121 122 1.743995 GGGGTACACACGGATGCAC 60.744 63.158 0.00 0.00 0.00 4.57
122 123 2.666207 GGGGTACACACGGATGCA 59.334 61.111 0.00 0.00 0.00 3.96
123 124 1.332144 TAGGGGGTACACACGGATGC 61.332 60.000 0.00 0.00 0.00 3.91
124 125 0.462789 GTAGGGGGTACACACGGATG 59.537 60.000 0.00 0.00 0.00 3.51
125 126 0.688749 GGTAGGGGGTACACACGGAT 60.689 60.000 0.00 0.00 32.62 4.18
126 127 1.305213 GGTAGGGGGTACACACGGA 60.305 63.158 0.00 0.00 32.62 4.69
127 128 2.361567 GGGTAGGGGGTACACACGG 61.362 68.421 0.00 0.00 34.80 4.94
128 129 0.033208 TAGGGTAGGGGGTACACACG 60.033 60.000 0.00 0.00 37.53 4.49
129 130 2.484189 ATAGGGTAGGGGGTACACAC 57.516 55.000 0.00 0.00 37.53 3.82
130 131 3.759452 GCATATAGGGTAGGGGGTACACA 60.759 52.174 0.00 0.00 37.53 3.72
131 132 2.836372 GCATATAGGGTAGGGGGTACAC 59.164 54.545 0.00 0.00 34.90 2.90
132 133 2.455555 TGCATATAGGGTAGGGGGTACA 59.544 50.000 0.00 0.00 32.62 2.90
133 134 2.836372 GTGCATATAGGGTAGGGGGTAC 59.164 54.545 0.00 0.00 0.00 3.34
134 135 2.225701 GGTGCATATAGGGTAGGGGGTA 60.226 54.545 0.00 0.00 0.00 3.69
135 136 1.486363 GGTGCATATAGGGTAGGGGGT 60.486 57.143 0.00 0.00 0.00 4.95
136 137 1.203440 AGGTGCATATAGGGTAGGGGG 60.203 57.143 0.00 0.00 0.00 5.40
137 138 2.188817 GAGGTGCATATAGGGTAGGGG 58.811 57.143 0.00 0.00 0.00 4.79
138 139 2.188817 GGAGGTGCATATAGGGTAGGG 58.811 57.143 0.00 0.00 0.00 3.53
139 140 1.825474 CGGAGGTGCATATAGGGTAGG 59.175 57.143 0.00 0.00 0.00 3.18
140 141 2.755655 CTCGGAGGTGCATATAGGGTAG 59.244 54.545 0.00 0.00 0.00 3.18
141 142 2.377531 TCTCGGAGGTGCATATAGGGTA 59.622 50.000 4.96 0.00 0.00 3.69
142 143 1.147191 TCTCGGAGGTGCATATAGGGT 59.853 52.381 4.96 0.00 0.00 4.34
143 144 1.821753 CTCTCGGAGGTGCATATAGGG 59.178 57.143 4.96 0.00 0.00 3.53
144 145 2.490115 GTCTCTCGGAGGTGCATATAGG 59.510 54.545 4.96 0.00 0.00 2.57
145 146 3.190327 CAGTCTCTCGGAGGTGCATATAG 59.810 52.174 4.96 0.00 0.00 1.31
146 147 3.149981 CAGTCTCTCGGAGGTGCATATA 58.850 50.000 4.96 0.00 0.00 0.86
147 148 1.959985 CAGTCTCTCGGAGGTGCATAT 59.040 52.381 4.96 0.00 0.00 1.78
148 149 1.064685 TCAGTCTCTCGGAGGTGCATA 60.065 52.381 4.96 0.00 0.00 3.14
149 150 0.323816 TCAGTCTCTCGGAGGTGCAT 60.324 55.000 4.96 0.00 0.00 3.96
150 151 0.539669 TTCAGTCTCTCGGAGGTGCA 60.540 55.000 4.96 0.00 0.00 4.57
151 152 0.109039 GTTCAGTCTCTCGGAGGTGC 60.109 60.000 4.96 0.00 0.00 5.01
152 153 0.528470 GGTTCAGTCTCTCGGAGGTG 59.472 60.000 4.96 0.00 0.00 4.00
153 154 0.961358 CGGTTCAGTCTCTCGGAGGT 60.961 60.000 4.96 0.00 0.00 3.85
154 155 0.677098 TCGGTTCAGTCTCTCGGAGG 60.677 60.000 4.96 0.00 0.00 4.30
155 156 0.448593 GTCGGTTCAGTCTCTCGGAG 59.551 60.000 0.00 0.00 0.00 4.63
156 157 0.250597 TGTCGGTTCAGTCTCTCGGA 60.251 55.000 0.00 0.00 0.00 4.55
157 158 0.811915 ATGTCGGTTCAGTCTCTCGG 59.188 55.000 0.00 0.00 0.00 4.63
158 159 3.312697 TGATATGTCGGTTCAGTCTCTCG 59.687 47.826 0.00 0.00 0.00 4.04
159 160 4.902443 TGATATGTCGGTTCAGTCTCTC 57.098 45.455 0.00 0.00 0.00 3.20
160 161 5.136828 AGATGATATGTCGGTTCAGTCTCT 58.863 41.667 0.00 0.00 0.00 3.10
161 162 5.446143 AGATGATATGTCGGTTCAGTCTC 57.554 43.478 0.00 0.00 0.00 3.36
162 163 5.360999 TCAAGATGATATGTCGGTTCAGTCT 59.639 40.000 0.00 0.00 0.00 3.24
163 164 5.592054 TCAAGATGATATGTCGGTTCAGTC 58.408 41.667 0.00 0.00 0.00 3.51
164 165 5.360999 TCTCAAGATGATATGTCGGTTCAGT 59.639 40.000 0.00 0.00 0.00 3.41
165 166 5.836347 TCTCAAGATGATATGTCGGTTCAG 58.164 41.667 0.00 0.00 0.00 3.02
166 167 5.852282 TCTCAAGATGATATGTCGGTTCA 57.148 39.130 0.00 0.00 0.00 3.18
167 168 7.721286 AAATCTCAAGATGATATGTCGGTTC 57.279 36.000 0.00 0.00 34.49 3.62
168 169 8.204160 TGTAAATCTCAAGATGATATGTCGGTT 58.796 33.333 0.00 0.00 34.49 4.44
169 170 7.726216 TGTAAATCTCAAGATGATATGTCGGT 58.274 34.615 0.00 0.00 34.49 4.69
170 171 8.593492 TTGTAAATCTCAAGATGATATGTCGG 57.407 34.615 0.00 0.00 34.49 4.79
176 177 9.383519 GGTGACTTTGTAAATCTCAAGATGATA 57.616 33.333 0.00 0.00 34.49 2.15
177 178 7.065085 CGGTGACTTTGTAAATCTCAAGATGAT 59.935 37.037 0.00 0.00 34.49 2.45
178 179 6.368791 CGGTGACTTTGTAAATCTCAAGATGA 59.631 38.462 0.00 0.00 34.49 2.92
179 180 6.147821 ACGGTGACTTTGTAAATCTCAAGATG 59.852 38.462 0.00 0.00 34.49 2.90
180 181 6.231211 ACGGTGACTTTGTAAATCTCAAGAT 58.769 36.000 0.00 0.00 36.07 2.40
181 182 5.607477 ACGGTGACTTTGTAAATCTCAAGA 58.393 37.500 0.00 0.00 0.00 3.02
182 183 5.924475 ACGGTGACTTTGTAAATCTCAAG 57.076 39.130 0.00 0.00 0.00 3.02
183 184 5.929992 CCTACGGTGACTTTGTAAATCTCAA 59.070 40.000 0.00 0.00 0.00 3.02
184 185 5.475719 CCTACGGTGACTTTGTAAATCTCA 58.524 41.667 0.00 0.00 0.00 3.27
185 186 4.329256 GCCTACGGTGACTTTGTAAATCTC 59.671 45.833 0.00 0.00 0.00 2.75
186 187 4.251268 GCCTACGGTGACTTTGTAAATCT 58.749 43.478 0.00 0.00 0.00 2.40
187 188 3.061697 CGCCTACGGTGACTTTGTAAATC 59.938 47.826 0.00 0.00 34.74 2.17
188 189 2.997986 CGCCTACGGTGACTTTGTAAAT 59.002 45.455 0.00 0.00 34.74 1.40
189 190 2.406130 CGCCTACGGTGACTTTGTAAA 58.594 47.619 0.00 0.00 34.74 2.01
190 191 1.936203 GCGCCTACGGTGACTTTGTAA 60.936 52.381 0.00 0.00 40.57 2.41
191 192 0.388907 GCGCCTACGGTGACTTTGTA 60.389 55.000 0.00 0.00 40.57 2.41
192 193 1.666872 GCGCCTACGGTGACTTTGT 60.667 57.895 0.00 0.00 40.57 2.83
193 194 2.388232 GGCGCCTACGGTGACTTTG 61.388 63.158 22.15 0.00 38.38 2.77
194 195 2.047560 GGCGCCTACGGTGACTTT 60.048 61.111 22.15 0.00 38.38 2.66
197 198 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
199 200 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
202 203 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
203 204 3.332493 TTGACGACGAGGCGCCTAC 62.332 63.158 32.97 22.05 33.86 3.18
204 205 3.057548 TTGACGACGAGGCGCCTA 61.058 61.111 32.97 9.31 33.86 3.93
205 206 4.719369 GTTGACGACGAGGCGCCT 62.719 66.667 33.48 33.48 33.86 5.52
225 226 0.313043 TTCAGTGGGACGAGACGTTC 59.687 55.000 0.00 0.00 41.37 3.95
226 227 0.748450 TTTCAGTGGGACGAGACGTT 59.252 50.000 0.00 0.00 41.37 3.99
227 228 0.314302 CTTTCAGTGGGACGAGACGT 59.686 55.000 0.00 0.00 45.10 4.34
228 229 0.388649 CCTTTCAGTGGGACGAGACG 60.389 60.000 0.00 0.00 0.00 4.18
229 230 0.670854 GCCTTTCAGTGGGACGAGAC 60.671 60.000 0.00 0.00 0.00 3.36
230 231 1.118965 TGCCTTTCAGTGGGACGAGA 61.119 55.000 0.00 0.00 0.00 4.04
231 232 0.036010 ATGCCTTTCAGTGGGACGAG 60.036 55.000 0.00 0.00 0.00 4.18
232 233 0.036388 GATGCCTTTCAGTGGGACGA 60.036 55.000 0.00 0.00 0.00 4.20
233 234 1.361668 CGATGCCTTTCAGTGGGACG 61.362 60.000 0.00 0.00 0.00 4.79
234 235 1.648467 GCGATGCCTTTCAGTGGGAC 61.648 60.000 0.00 0.00 0.00 4.46
235 236 1.377202 GCGATGCCTTTCAGTGGGA 60.377 57.895 0.00 0.00 0.00 4.37
236 237 2.409870 GGCGATGCCTTTCAGTGGG 61.410 63.158 0.00 0.00 46.69 4.61
237 238 3.190878 GGCGATGCCTTTCAGTGG 58.809 61.111 0.00 0.00 46.69 4.00
257 258 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
258 259 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
259 260 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
260 261 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
261 262 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
262 263 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
263 264 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
264 265 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
265 266 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
266 267 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
267 268 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
268 269 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
279 280 0.934496 TTAGAATTTCCGGCGATGCG 59.066 50.000 9.30 0.00 0.00 4.73
280 281 3.626028 ATTTAGAATTTCCGGCGATGC 57.374 42.857 9.30 0.00 0.00 3.91
281 282 6.801862 GGATTTATTTAGAATTTCCGGCGATG 59.198 38.462 9.30 0.00 0.00 3.84
282 283 6.488683 TGGATTTATTTAGAATTTCCGGCGAT 59.511 34.615 9.30 0.00 0.00 4.58
283 284 5.823570 TGGATTTATTTAGAATTTCCGGCGA 59.176 36.000 9.30 0.00 0.00 5.54
284 285 6.017440 TCTGGATTTATTTAGAATTTCCGGCG 60.017 38.462 0.00 0.00 0.00 6.46
285 286 7.272037 TCTGGATTTATTTAGAATTTCCGGC 57.728 36.000 0.00 0.00 0.00 6.13
295 296 9.334693 GCTCGCATTATTTCTGGATTTATTTAG 57.665 33.333 0.00 0.00 0.00 1.85
296 297 8.845227 TGCTCGCATTATTTCTGGATTTATTTA 58.155 29.630 0.00 0.00 0.00 1.40
297 298 7.649306 GTGCTCGCATTATTTCTGGATTTATTT 59.351 33.333 0.00 0.00 0.00 1.40
298 299 7.141363 GTGCTCGCATTATTTCTGGATTTATT 58.859 34.615 0.00 0.00 0.00 1.40
299 300 6.262944 TGTGCTCGCATTATTTCTGGATTTAT 59.737 34.615 0.00 0.00 0.00 1.40
300 301 5.588246 TGTGCTCGCATTATTTCTGGATTTA 59.412 36.000 0.00 0.00 0.00 1.40
301 302 4.398988 TGTGCTCGCATTATTTCTGGATTT 59.601 37.500 0.00 0.00 0.00 2.17
302 303 3.947196 TGTGCTCGCATTATTTCTGGATT 59.053 39.130 0.00 0.00 0.00 3.01
303 304 3.544684 TGTGCTCGCATTATTTCTGGAT 58.455 40.909 0.00 0.00 0.00 3.41
304 305 2.938451 CTGTGCTCGCATTATTTCTGGA 59.062 45.455 0.00 0.00 0.00 3.86
305 306 2.032550 CCTGTGCTCGCATTATTTCTGG 59.967 50.000 0.00 0.00 0.00 3.86
306 307 2.938451 TCCTGTGCTCGCATTATTTCTG 59.062 45.455 0.00 0.00 0.00 3.02
307 308 2.939103 GTCCTGTGCTCGCATTATTTCT 59.061 45.455 0.00 0.00 0.00 2.52
308 309 2.939103 AGTCCTGTGCTCGCATTATTTC 59.061 45.455 0.00 0.00 0.00 2.17
309 310 2.991250 AGTCCTGTGCTCGCATTATTT 58.009 42.857 0.00 0.00 0.00 1.40
310 311 2.679837 CAAGTCCTGTGCTCGCATTATT 59.320 45.455 0.00 0.00 0.00 1.40
311 312 2.093500 TCAAGTCCTGTGCTCGCATTAT 60.093 45.455 0.00 0.00 0.00 1.28
312 313 1.275010 TCAAGTCCTGTGCTCGCATTA 59.725 47.619 0.00 0.00 0.00 1.90
313 314 0.035317 TCAAGTCCTGTGCTCGCATT 59.965 50.000 0.00 0.00 0.00 3.56
314 315 0.035317 TTCAAGTCCTGTGCTCGCAT 59.965 50.000 0.00 0.00 0.00 4.73
315 316 0.880278 GTTCAAGTCCTGTGCTCGCA 60.880 55.000 0.00 0.00 0.00 5.10
316 317 1.569479 GGTTCAAGTCCTGTGCTCGC 61.569 60.000 0.00 0.00 0.00 5.03
317 318 0.951040 GGGTTCAAGTCCTGTGCTCG 60.951 60.000 0.00 0.00 0.00 5.03
318 319 0.398318 AGGGTTCAAGTCCTGTGCTC 59.602 55.000 0.00 0.00 31.11 4.26
319 320 1.625818 CTAGGGTTCAAGTCCTGTGCT 59.374 52.381 0.00 0.00 34.75 4.40
320 321 1.348036 ACTAGGGTTCAAGTCCTGTGC 59.652 52.381 0.00 0.00 34.75 4.57
321 322 2.289694 CCACTAGGGTTCAAGTCCTGTG 60.290 54.545 0.00 0.00 34.75 3.66
322 323 1.978580 CCACTAGGGTTCAAGTCCTGT 59.021 52.381 0.00 0.00 34.75 4.00
323 324 2.770164 CCACTAGGGTTCAAGTCCTG 57.230 55.000 0.00 0.00 34.75 3.86
335 336 1.137697 GGTATCCCCAACCCACTAGG 58.862 60.000 0.00 0.00 43.78 3.02
336 337 1.887797 TGGTATCCCCAACCCACTAG 58.112 55.000 0.00 0.00 41.50 2.57
349 350 5.422650 GGATGGTTAGAGGGATAGTGGTATC 59.577 48.000 0.00 0.00 35.19 2.24
350 351 5.162760 TGGATGGTTAGAGGGATAGTGGTAT 60.163 44.000 0.00 0.00 0.00 2.73
351 352 4.171243 TGGATGGTTAGAGGGATAGTGGTA 59.829 45.833 0.00 0.00 0.00 3.25
352 353 3.051341 TGGATGGTTAGAGGGATAGTGGT 60.051 47.826 0.00 0.00 0.00 4.16
353 354 3.587498 TGGATGGTTAGAGGGATAGTGG 58.413 50.000 0.00 0.00 0.00 4.00
354 355 4.202367 GGTTGGATGGTTAGAGGGATAGTG 60.202 50.000 0.00 0.00 0.00 2.74
355 356 3.974642 GGTTGGATGGTTAGAGGGATAGT 59.025 47.826 0.00 0.00 0.00 2.12
356 357 3.973973 TGGTTGGATGGTTAGAGGGATAG 59.026 47.826 0.00 0.00 0.00 2.08
357 358 3.714798 GTGGTTGGATGGTTAGAGGGATA 59.285 47.826 0.00 0.00 0.00 2.59
358 359 2.509964 GTGGTTGGATGGTTAGAGGGAT 59.490 50.000 0.00 0.00 0.00 3.85
359 360 1.913419 GTGGTTGGATGGTTAGAGGGA 59.087 52.381 0.00 0.00 0.00 4.20
360 361 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
361 362 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
362 363 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
363 364 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
364 365 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
377 378 2.616330 ATGCGCGAACCAACCTGTG 61.616 57.895 12.10 0.00 0.00 3.66
378 379 2.281484 ATGCGCGAACCAACCTGT 60.281 55.556 12.10 0.00 0.00 4.00
379 380 2.128853 AACATGCGCGAACCAACCTG 62.129 55.000 12.10 0.00 0.00 4.00
380 381 1.452145 AAACATGCGCGAACCAACCT 61.452 50.000 12.10 0.00 0.00 3.50
381 382 0.238817 TAAACATGCGCGAACCAACC 59.761 50.000 12.10 0.00 0.00 3.77
382 383 1.602191 CTAAACATGCGCGAACCAAC 58.398 50.000 12.10 0.00 0.00 3.77
383 384 0.519519 CCTAAACATGCGCGAACCAA 59.480 50.000 12.10 0.00 0.00 3.67
384 385 1.302383 CCCTAAACATGCGCGAACCA 61.302 55.000 12.10 0.00 0.00 3.67
385 386 1.427819 CCCTAAACATGCGCGAACC 59.572 57.895 12.10 0.00 0.00 3.62
386 387 1.427819 CCCCTAAACATGCGCGAAC 59.572 57.895 12.10 0.00 0.00 3.95
387 388 1.747367 CCCCCTAAACATGCGCGAA 60.747 57.895 12.10 0.00 0.00 4.70
388 389 2.124901 CCCCCTAAACATGCGCGA 60.125 61.111 12.10 0.00 0.00 5.87
389 390 3.887868 GCCCCCTAAACATGCGCG 61.888 66.667 0.00 0.00 0.00 6.86
390 391 2.440247 AGCCCCCTAAACATGCGC 60.440 61.111 0.00 0.00 0.00 6.09
391 392 2.774799 GCAGCCCCCTAAACATGCG 61.775 63.158 0.00 0.00 0.00 4.73
392 393 1.380380 AGCAGCCCCCTAAACATGC 60.380 57.895 0.00 0.00 0.00 4.06
393 394 0.034186 TCAGCAGCCCCCTAAACATG 60.034 55.000 0.00 0.00 0.00 3.21
394 395 0.034089 GTCAGCAGCCCCCTAAACAT 60.034 55.000 0.00 0.00 0.00 2.71
395 396 1.133809 AGTCAGCAGCCCCCTAAACA 61.134 55.000 0.00 0.00 0.00 2.83
396 397 0.909623 TAGTCAGCAGCCCCCTAAAC 59.090 55.000 0.00 0.00 0.00 2.01
397 398 0.909623 GTAGTCAGCAGCCCCCTAAA 59.090 55.000 0.00 0.00 0.00 1.85
398 399 0.042731 AGTAGTCAGCAGCCCCCTAA 59.957 55.000 0.00 0.00 0.00 2.69
399 400 0.687757 CAGTAGTCAGCAGCCCCCTA 60.688 60.000 0.00 0.00 0.00 3.53
400 401 1.992277 CAGTAGTCAGCAGCCCCCT 60.992 63.158 0.00 0.00 0.00 4.79
401 402 2.586792 CAGTAGTCAGCAGCCCCC 59.413 66.667 0.00 0.00 0.00 5.40
402 403 2.124942 GCAGTAGTCAGCAGCCCC 60.125 66.667 0.00 0.00 0.00 5.80
403 404 0.813210 GATGCAGTAGTCAGCAGCCC 60.813 60.000 0.00 0.00 44.94 5.19
404 405 0.107993 TGATGCAGTAGTCAGCAGCC 60.108 55.000 0.00 0.00 45.83 4.85
405 406 1.664659 CTTGATGCAGTAGTCAGCAGC 59.335 52.381 0.00 0.00 46.53 5.25
406 407 2.969990 ACTTGATGCAGTAGTCAGCAG 58.030 47.619 0.00 0.00 44.94 4.24
407 408 3.069289 CAACTTGATGCAGTAGTCAGCA 58.931 45.455 0.00 0.00 45.92 4.41
408 409 3.070018 ACAACTTGATGCAGTAGTCAGC 58.930 45.455 0.00 0.00 0.00 4.26
409 410 4.751600 TCAACAACTTGATGCAGTAGTCAG 59.248 41.667 0.00 0.00 31.00 3.51
410 411 4.702831 TCAACAACTTGATGCAGTAGTCA 58.297 39.130 0.00 0.00 31.00 3.41
411 412 5.444122 GTTCAACAACTTGATGCAGTAGTC 58.556 41.667 0.00 0.00 36.26 2.59
412 413 4.024893 CGTTCAACAACTTGATGCAGTAGT 60.025 41.667 0.00 0.00 36.26 2.73
413 414 4.024893 ACGTTCAACAACTTGATGCAGTAG 60.025 41.667 0.00 0.00 36.26 2.57
414 415 3.874543 ACGTTCAACAACTTGATGCAGTA 59.125 39.130 0.00 0.00 36.26 2.74
415 416 2.682856 ACGTTCAACAACTTGATGCAGT 59.317 40.909 0.00 0.00 36.26 4.40
416 417 3.291585 GACGTTCAACAACTTGATGCAG 58.708 45.455 0.00 0.00 36.26 4.41
417 418 2.032799 GGACGTTCAACAACTTGATGCA 59.967 45.455 0.00 0.00 36.26 3.96
418 419 2.604614 GGGACGTTCAACAACTTGATGC 60.605 50.000 0.00 0.00 36.26 3.91
419 420 2.878406 AGGGACGTTCAACAACTTGATG 59.122 45.455 0.00 0.00 36.26 3.07
420 421 3.208747 AGGGACGTTCAACAACTTGAT 57.791 42.857 0.00 0.00 36.26 2.57
421 422 2.702592 AGGGACGTTCAACAACTTGA 57.297 45.000 0.00 0.00 34.39 3.02
422 423 4.886247 TTAAGGGACGTTCAACAACTTG 57.114 40.909 0.00 0.00 0.00 3.16
423 424 5.900865 TTTTAAGGGACGTTCAACAACTT 57.099 34.783 0.00 0.00 0.00 2.66
424 425 5.900865 TTTTTAAGGGACGTTCAACAACT 57.099 34.783 0.00 0.00 0.00 3.16
453 454 6.662616 CACCTGAAATCTACTGTTCAACAAG 58.337 40.000 0.00 0.00 33.52 3.16
454 455 5.008613 GCACCTGAAATCTACTGTTCAACAA 59.991 40.000 0.00 0.00 33.52 2.83
539 541 3.241784 GCTTCTCGAAAGATTGCTACTCG 59.758 47.826 10.34 0.00 40.84 4.18
618 1610 0.541392 ATCTTGTGCCACGCTCCATA 59.459 50.000 0.00 0.00 0.00 2.74
625 1617 6.844696 ATACTGTATTTATCTTGTGCCACG 57.155 37.500 0.00 0.00 0.00 4.94
871 1911 7.068226 GGGGTTGCTTATATAGAGCTTCAAAAA 59.932 37.037 14.13 2.16 40.75 1.94
907 1950 2.047560 GTGGTCGTGGCACCCTAC 60.048 66.667 12.86 7.35 35.26 3.18
908 1951 3.315949 GGTGGTCGTGGCACCCTA 61.316 66.667 12.86 0.00 35.26 3.53
919 1962 1.819632 GTGGATGATGGCGGTGGTC 60.820 63.158 0.00 0.00 0.00 4.02
953 2025 2.894902 TCGGCGCTGTATTTGTTATGA 58.105 42.857 17.37 0.00 0.00 2.15
962 2034 2.049985 GCTCGATCGGCGCTGTAT 60.050 61.111 17.37 8.50 40.61 2.29
995 2088 0.739462 CACTGCCATTGCCATTGCTG 60.739 55.000 0.25 0.25 38.71 4.41
1110 2206 0.475906 AGTGGAGCTTCTTGCCAAGT 59.524 50.000 4.04 0.00 44.23 3.16
1158 2254 4.770362 TCCCAGGGATCGTGGCGA 62.770 66.667 3.01 4.22 37.99 5.54
1223 2356 1.667236 TGCTGCTCAAACATATCCCG 58.333 50.000 0.00 0.00 0.00 5.14
1224 2357 2.223665 GCTTGCTGCTCAAACATATCCC 60.224 50.000 0.00 0.00 38.95 3.85
1225 2358 3.075866 GCTTGCTGCTCAAACATATCC 57.924 47.619 0.00 0.00 38.95 2.59
1242 2416 5.255687 TCCACACACAAATATCATCAGCTT 58.744 37.500 0.00 0.00 0.00 3.74
1252 2427 4.724293 TCCCTGGATATCCACACACAAATA 59.276 41.667 20.98 0.00 42.01 1.40
1255 2430 2.556766 TCCCTGGATATCCACACACAA 58.443 47.619 20.98 0.00 42.01 3.33
1269 2444 1.301244 CGATCTTCGCCATCCCTGG 60.301 63.158 0.00 0.00 46.17 4.45
1280 2455 1.407258 CACTCCCTCTCACCGATCTTC 59.593 57.143 0.00 0.00 0.00 2.87
1358 2533 2.202932 CAGAATCCCCGCTCCGTG 60.203 66.667 0.00 0.00 0.00 4.94
1370 2545 1.000896 CCCCGTTGCCTTCCAGAAT 60.001 57.895 0.00 0.00 0.00 2.40
1433 2608 1.293498 GAGCGTCTTCTTGAGCCCA 59.707 57.895 0.00 0.00 0.00 5.36
1568 2749 4.171103 GGCGTGGCCTTCCGGTAT 62.171 66.667 3.32 0.00 46.69 2.73
1587 2768 3.023119 CTCTCTGCTCTAGCTCCTTGAA 58.977 50.000 3.26 0.00 42.66 2.69
1757 2968 2.363361 GACGAGGAGGAGGGGGAA 59.637 66.667 0.00 0.00 0.00 3.97
1760 2971 4.444081 ACCGACGAGGAGGAGGGG 62.444 72.222 8.56 0.00 45.00 4.79
1761 2972 3.141488 CACCGACGAGGAGGAGGG 61.141 72.222 8.56 0.00 45.00 4.30
1821 3050 0.759346 ACGTCTGCTTCCTTCTTGGT 59.241 50.000 0.00 0.00 37.07 3.67
1908 3137 4.629523 TGGGTTCACGGCCGGAAC 62.630 66.667 33.44 33.44 42.99 3.62
1932 3161 2.186903 CGCCGGTAACTGGATGCT 59.813 61.111 1.90 0.00 32.87 3.79
1935 3164 4.524318 CGCCGCCGGTAACTGGAT 62.524 66.667 4.45 0.00 32.87 3.41
1941 3170 1.227031 CATAGTTCGCCGCCGGTAA 60.227 57.895 4.45 0.00 34.56 2.85
1956 3185 1.202758 GGACATGTTCGGCATCCCATA 60.203 52.381 0.00 0.00 35.19 2.74
2001 3230 2.839098 CAGGTCCAGCACACCCTT 59.161 61.111 0.00 0.00 33.96 3.95
2041 3270 0.108756 GAACACTCCGTGGCTACTCC 60.109 60.000 0.00 0.00 37.94 3.85
2045 3274 0.892358 AGTCGAACACTCCGTGGCTA 60.892 55.000 0.00 0.00 37.94 3.93
2130 3359 3.367498 GGCTAGTATAGAAGATGGGCGTG 60.367 52.174 0.00 0.00 42.77 5.34
2209 3446 5.106197 TGCTATGCACAACTGAATTTACAGG 60.106 40.000 0.00 0.00 36.56 4.00
2251 6154 5.185454 ACTGTCATGTCAAACAAAGAGACA 58.815 37.500 0.00 0.00 45.26 3.41
2295 6201 7.820648 ACACAGAACAATTCCATAAGTTGATC 58.179 34.615 0.00 0.00 0.00 2.92
2352 6293 6.460123 CCACCACAGGCATTCTTGATTATAAC 60.460 42.308 0.00 0.00 0.00 1.89
2354 6295 5.132502 CCACCACAGGCATTCTTGATTATA 58.867 41.667 0.00 0.00 0.00 0.98
2441 6391 5.014123 ACATTGTTGTTATCTCCCTTCCTCA 59.986 40.000 0.00 0.00 29.55 3.86
2442 6392 5.355350 CACATTGTTGTTATCTCCCTTCCTC 59.645 44.000 0.00 0.00 32.34 3.71
2443 6393 5.014123 TCACATTGTTGTTATCTCCCTTCCT 59.986 40.000 0.00 0.00 32.34 3.36
2444 6394 5.253330 TCACATTGTTGTTATCTCCCTTCC 58.747 41.667 0.00 0.00 32.34 3.46
2445 6395 5.355350 CCTCACATTGTTGTTATCTCCCTTC 59.645 44.000 0.00 0.00 32.34 3.46
2446 6396 5.014123 TCCTCACATTGTTGTTATCTCCCTT 59.986 40.000 0.00 0.00 32.34 3.95
2447 6397 4.536090 TCCTCACATTGTTGTTATCTCCCT 59.464 41.667 0.00 0.00 32.34 4.20
2448 6398 4.843728 TCCTCACATTGTTGTTATCTCCC 58.156 43.478 0.00 0.00 32.34 4.30
2449 6399 5.355350 CCTTCCTCACATTGTTGTTATCTCC 59.645 44.000 0.00 0.00 32.34 3.71
2450 6400 5.355350 CCCTTCCTCACATTGTTGTTATCTC 59.645 44.000 0.00 0.00 32.34 2.75
2451 6401 5.014123 TCCCTTCCTCACATTGTTGTTATCT 59.986 40.000 0.00 0.00 32.34 1.98
2452 6402 5.253330 TCCCTTCCTCACATTGTTGTTATC 58.747 41.667 0.00 0.00 32.34 1.75
2453 6403 5.014123 TCTCCCTTCCTCACATTGTTGTTAT 59.986 40.000 0.00 0.00 32.34 1.89
2454 6404 4.349636 TCTCCCTTCCTCACATTGTTGTTA 59.650 41.667 0.00 0.00 32.34 2.41
2455 6405 3.138283 TCTCCCTTCCTCACATTGTTGTT 59.862 43.478 0.00 0.00 32.34 2.83
2456 6406 2.711009 TCTCCCTTCCTCACATTGTTGT 59.289 45.455 0.00 0.00 36.15 3.32
2457 6407 3.423539 TCTCCCTTCCTCACATTGTTG 57.576 47.619 0.00 0.00 0.00 3.33
2458 6408 5.014123 TGTTATCTCCCTTCCTCACATTGTT 59.986 40.000 0.00 0.00 0.00 2.83
2459 6409 4.536090 TGTTATCTCCCTTCCTCACATTGT 59.464 41.667 0.00 0.00 0.00 2.71
2460 6410 5.102953 TGTTATCTCCCTTCCTCACATTG 57.897 43.478 0.00 0.00 0.00 2.82
2461 6411 5.014123 TGTTGTTATCTCCCTTCCTCACATT 59.986 40.000 0.00 0.00 0.00 2.71
2462 6412 4.536090 TGTTGTTATCTCCCTTCCTCACAT 59.464 41.667 0.00 0.00 0.00 3.21
2463 6413 3.907474 TGTTGTTATCTCCCTTCCTCACA 59.093 43.478 0.00 0.00 0.00 3.58
2464 6414 4.553330 TGTTGTTATCTCCCTTCCTCAC 57.447 45.455 0.00 0.00 0.00 3.51
2465 6415 4.782691 TCATGTTGTTATCTCCCTTCCTCA 59.217 41.667 0.00 0.00 0.00 3.86
2546 6496 2.159379 GCAATGGTTTCCTCATCGTTCC 60.159 50.000 0.00 0.00 0.00 3.62
2567 6517 2.638480 TTTGAGATTATCCTGGCCCG 57.362 50.000 0.00 0.00 0.00 6.13
2598 6548 9.586435 GCTCCAAACAACTGCTTATAATAATTT 57.414 29.630 0.00 0.00 0.00 1.82
2622 6572 1.140252 GTTATCATGTACCCCCGTGCT 59.860 52.381 0.00 0.00 0.00 4.40
2630 6580 7.159372 CCTATACTTGTGGGTTATCATGTACC 58.841 42.308 0.00 0.00 30.87 3.34
2695 6645 4.036262 TCCCTTTGTGTCGAATCAACAAAG 59.964 41.667 23.79 23.79 43.81 2.77
2828 6778 6.579292 TGTTGTCTTGACTTTTGTTAACGTTG 59.421 34.615 11.99 0.00 0.00 4.10
2948 6898 8.084985 TCCGGCATAATTATCCATCACTAATA 57.915 34.615 0.00 0.00 0.00 0.98
3019 6969 4.641989 ACATTACATTGATGAACTGGAGCC 59.358 41.667 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.