Multiple sequence alignment - TraesCS4B01G328400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G328400 chr4B 100.000 5921 0 0 1 5921 619368511 619362591 0.000000e+00 10935.0
1 TraesCS4B01G328400 chr4B 86.364 1584 186 14 3286 4855 619330511 619328944 0.000000e+00 1701.0
2 TraesCS4B01G328400 chr4B 93.522 494 30 2 1 494 553263210 553262719 0.000000e+00 734.0
3 TraesCS4B01G328400 chr4B 86.321 424 41 6 2865 3285 619349876 619349467 4.210000e-121 446.0
4 TraesCS4B01G328400 chr4B 87.105 380 38 7 995 1373 619350282 619349913 2.550000e-113 420.0
5 TraesCS4B01G328400 chr4B 82.014 417 29 21 494 880 619352078 619351678 4.460000e-81 313.0
6 TraesCS4B01G328400 chr4B 78.629 248 39 9 3000 3235 619431117 619431362 1.030000e-32 152.0
7 TraesCS4B01G328400 chr5A 99.233 1435 11 0 1428 2862 534072732 534074166 0.000000e+00 2590.0
8 TraesCS4B01G328400 chr5A 88.220 1978 160 35 2975 4930 666309465 666307539 0.000000e+00 2294.0
9 TraesCS4B01G328400 chr5A 85.106 517 39 17 881 1392 666310044 666309561 1.480000e-135 494.0
10 TraesCS4B01G328400 chr5A 85.185 459 67 1 1433 1890 462897726 462897268 2.500000e-128 470.0
11 TraesCS4B01G328400 chr5A 82.632 380 63 1 3697 4073 47540517 47540138 3.420000e-87 333.0
12 TraesCS4B01G328400 chr5A 88.034 234 13 10 617 844 666310397 666310173 4.550000e-66 263.0
13 TraesCS4B01G328400 chr5A 83.268 257 30 11 2994 3239 666315117 666315371 2.150000e-54 224.0
14 TraesCS4B01G328400 chr5B 97.772 1436 10 2 1428 2863 642597194 642598607 0.000000e+00 2455.0
15 TraesCS4B01G328400 chr5B 82.632 380 63 2 3697 4073 72098445 72098824 3.420000e-87 333.0
16 TraesCS4B01G328400 chr5B 77.447 470 98 6 4203 4671 62027933 62027471 2.100000e-69 274.0
17 TraesCS4B01G328400 chr5B 88.360 189 21 1 2678 2865 522389202 522389390 5.970000e-55 226.0
18 TraesCS4B01G328400 chr5B 88.360 189 21 1 2678 2865 522391114 522391302 5.970000e-55 226.0
19 TraesCS4B01G328400 chr5B 88.360 189 21 1 2678 2865 522391990 522392178 5.970000e-55 226.0
20 TraesCS4B01G328400 chr1B 95.486 1462 38 5 1428 2863 407901335 407902794 0.000000e+00 2309.0
21 TraesCS4B01G328400 chr1B 95.585 838 37 0 4957 5794 593248403 593247566 0.000000e+00 1343.0
22 TraesCS4B01G328400 chr1B 81.250 592 104 6 4200 4789 637399366 637399952 6.950000e-129 472.0
23 TraesCS4B01G328400 chr1A 92.302 1442 68 14 1429 2862 50519013 50520419 0.000000e+00 2008.0
24 TraesCS4B01G328400 chr1A 94.636 839 44 1 4957 5794 6295771 6294933 0.000000e+00 1299.0
25 TraesCS4B01G328400 chr1A 81.956 593 98 7 4200 4789 554105113 554105699 1.480000e-135 494.0
26 TraesCS4B01G328400 chr1A 83.960 399 64 0 3673 4071 554104626 554105024 3.350000e-102 383.0
27 TraesCS4B01G328400 chr4D 89.925 1340 87 21 2862 4184 485537393 485538701 0.000000e+00 1683.0
28 TraesCS4B01G328400 chr4D 90.566 848 67 7 4115 4958 485538707 485539545 0.000000e+00 1110.0
29 TraesCS4B01G328400 chr4D 92.683 451 25 5 940 1389 485536926 485537369 1.390000e-180 643.0
30 TraesCS4B01G328400 chr4D 85.455 330 39 5 4633 4958 485539634 485539958 9.510000e-88 335.0
31 TraesCS4B01G328400 chr4D 81.633 294 32 10 548 841 485536494 485536765 2.150000e-54 224.0
32 TraesCS4B01G328400 chr4D 76.923 299 38 19 2996 3279 485534658 485534376 2.220000e-29 141.0
33 TraesCS4B01G328400 chr3D 91.431 1132 90 6 1427 2553 8534531 8535660 0.000000e+00 1546.0
34 TraesCS4B01G328400 chr6D 91.247 1131 92 6 1428 2553 45487511 45486383 0.000000e+00 1533.0
35 TraesCS4B01G328400 chr2D 90.981 1131 92 7 1428 2553 316559807 316558682 0.000000e+00 1515.0
36 TraesCS4B01G328400 chr2D 91.050 838 52 10 1428 2245 317056486 317057320 0.000000e+00 1110.0
37 TraesCS4B01G328400 chr2D 88.588 850 61 11 1416 2245 317053291 317054124 0.000000e+00 1000.0
38 TraesCS4B01G328400 chr2D 93.347 496 31 2 1 494 565980434 565980929 0.000000e+00 732.0
39 TraesCS4B01G328400 chr2D 88.217 314 36 1 2241 2553 317059059 317059372 2.010000e-99 374.0
40 TraesCS4B01G328400 chr2D 87.898 314 37 1 2241 2553 317055902 317056215 9.370000e-98 368.0
41 TraesCS4B01G328400 chr2B 97.375 838 22 0 4957 5794 40937654 40938491 0.000000e+00 1426.0
42 TraesCS4B01G328400 chr2B 77.759 607 117 14 4200 4791 41377486 41378089 2.030000e-94 357.0
43 TraesCS4B01G328400 chr7B 96.905 840 24 2 4957 5794 597159918 597160757 0.000000e+00 1406.0
44 TraesCS4B01G328400 chr7B 85.714 84 11 1 3032 3115 745045049 745045131 2.940000e-13 87.9
45 TraesCS4B01G328400 chr3B 96.659 838 27 1 4957 5794 50236041 50236877 0.000000e+00 1391.0
46 TraesCS4B01G328400 chr3B 94.747 495 24 2 1 494 64692079 64692572 0.000000e+00 769.0
47 TraesCS4B01G328400 chr3B 79.422 554 96 14 4200 4738 176322052 176322602 5.600000e-100 375.0
48 TraesCS4B01G328400 chr6B 96.177 837 32 0 4958 5794 26468654 26467818 0.000000e+00 1369.0
49 TraesCS4B01G328400 chr6B 93.535 495 30 2 1 494 676811398 676811891 0.000000e+00 736.0
50 TraesCS4B01G328400 chr6B 93.333 495 32 1 1 494 624961532 624962026 0.000000e+00 730.0
51 TraesCS4B01G328400 chrUn 96.062 838 32 1 4957 5794 75990518 75989682 0.000000e+00 1363.0
52 TraesCS4B01G328400 chrUn 96.062 838 32 1 4957 5794 231194203 231193367 0.000000e+00 1363.0
53 TraesCS4B01G328400 chrUn 93.737 495 29 2 1 494 168739 168246 0.000000e+00 741.0
54 TraesCS4B01G328400 chrUn 88.360 189 21 1 2678 2865 324992502 324992690 5.970000e-55 226.0
55 TraesCS4B01G328400 chrUn 88.360 189 21 1 2678 2865 324993378 324993566 5.970000e-55 226.0
56 TraesCS4B01G328400 chr5D 94.743 837 41 2 4958 5794 98721732 98720899 0.000000e+00 1299.0
57 TraesCS4B01G328400 chr5D 93.725 494 31 0 1 494 507241131 507240638 0.000000e+00 741.0
58 TraesCS4B01G328400 chr5D 82.632 380 63 2 3697 4073 59044203 59043824 3.420000e-87 333.0
59 TraesCS4B01G328400 chr7D 93.737 495 30 1 1 494 589472062 589472556 0.000000e+00 741.0
60 TraesCS4B01G328400 chr7D 93.306 493 32 1 3 494 458590662 458591154 0.000000e+00 726.0
61 TraesCS4B01G328400 chr1D 81.926 592 100 5 4200 4789 462336253 462336839 1.480000e-135 494.0
62 TraesCS4B01G328400 chr1D 84.211 399 63 0 3673 4071 462335770 462336168 7.200000e-104 388.0
63 TraesCS4B01G328400 chr7A 81.152 382 72 0 3705 4086 47516057 47515676 2.070000e-79 307.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G328400 chr4B 619362591 619368511 5920 True 10935.0 10935 100.000000 1 5921 1 chr4B.!!$R3 5920
1 TraesCS4B01G328400 chr4B 619328944 619330511 1567 True 1701.0 1701 86.364000 3286 4855 1 chr4B.!!$R2 1569
2 TraesCS4B01G328400 chr4B 619349467 619352078 2611 True 393.0 446 85.146667 494 3285 3 chr4B.!!$R4 2791
3 TraesCS4B01G328400 chr5A 534072732 534074166 1434 False 2590.0 2590 99.233000 1428 2862 1 chr5A.!!$F1 1434
4 TraesCS4B01G328400 chr5A 666307539 666310397 2858 True 1017.0 2294 87.120000 617 4930 3 chr5A.!!$R3 4313
5 TraesCS4B01G328400 chr5B 642597194 642598607 1413 False 2455.0 2455 97.772000 1428 2863 1 chr5B.!!$F2 1435
6 TraesCS4B01G328400 chr5B 522389202 522392178 2976 False 226.0 226 88.360000 2678 2865 3 chr5B.!!$F3 187
7 TraesCS4B01G328400 chr1B 407901335 407902794 1459 False 2309.0 2309 95.486000 1428 2863 1 chr1B.!!$F1 1435
8 TraesCS4B01G328400 chr1B 593247566 593248403 837 True 1343.0 1343 95.585000 4957 5794 1 chr1B.!!$R1 837
9 TraesCS4B01G328400 chr1B 637399366 637399952 586 False 472.0 472 81.250000 4200 4789 1 chr1B.!!$F2 589
10 TraesCS4B01G328400 chr1A 50519013 50520419 1406 False 2008.0 2008 92.302000 1429 2862 1 chr1A.!!$F1 1433
11 TraesCS4B01G328400 chr1A 6294933 6295771 838 True 1299.0 1299 94.636000 4957 5794 1 chr1A.!!$R1 837
12 TraesCS4B01G328400 chr1A 554104626 554105699 1073 False 438.5 494 82.958000 3673 4789 2 chr1A.!!$F2 1116
13 TraesCS4B01G328400 chr4D 485536494 485539958 3464 False 799.0 1683 88.052400 548 4958 5 chr4D.!!$F1 4410
14 TraesCS4B01G328400 chr3D 8534531 8535660 1129 False 1546.0 1546 91.431000 1427 2553 1 chr3D.!!$F1 1126
15 TraesCS4B01G328400 chr6D 45486383 45487511 1128 True 1533.0 1533 91.247000 1428 2553 1 chr6D.!!$R1 1125
16 TraesCS4B01G328400 chr2D 316558682 316559807 1125 True 1515.0 1515 90.981000 1428 2553 1 chr2D.!!$R1 1125
17 TraesCS4B01G328400 chr2D 317053291 317059372 6081 False 713.0 1110 88.938250 1416 2553 4 chr2D.!!$F2 1137
18 TraesCS4B01G328400 chr2B 40937654 40938491 837 False 1426.0 1426 97.375000 4957 5794 1 chr2B.!!$F1 837
19 TraesCS4B01G328400 chr2B 41377486 41378089 603 False 357.0 357 77.759000 4200 4791 1 chr2B.!!$F2 591
20 TraesCS4B01G328400 chr7B 597159918 597160757 839 False 1406.0 1406 96.905000 4957 5794 1 chr7B.!!$F1 837
21 TraesCS4B01G328400 chr3B 50236041 50236877 836 False 1391.0 1391 96.659000 4957 5794 1 chr3B.!!$F1 837
22 TraesCS4B01G328400 chr3B 176322052 176322602 550 False 375.0 375 79.422000 4200 4738 1 chr3B.!!$F3 538
23 TraesCS4B01G328400 chr6B 26467818 26468654 836 True 1369.0 1369 96.177000 4958 5794 1 chr6B.!!$R1 836
24 TraesCS4B01G328400 chrUn 75989682 75990518 836 True 1363.0 1363 96.062000 4957 5794 1 chrUn.!!$R2 837
25 TraesCS4B01G328400 chrUn 231193367 231194203 836 True 1363.0 1363 96.062000 4957 5794 1 chrUn.!!$R3 837
26 TraesCS4B01G328400 chrUn 324992502 324993566 1064 False 226.0 226 88.360000 2678 2865 2 chrUn.!!$F1 187
27 TraesCS4B01G328400 chr5D 98720899 98721732 833 True 1299.0 1299 94.743000 4958 5794 1 chr5D.!!$R2 836
28 TraesCS4B01G328400 chr1D 462335770 462336839 1069 False 441.0 494 83.068500 3673 4789 2 chr1D.!!$F1 1116

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
463 464 0.029834 CCATCGTACCCCTCGTTACG 59.970 60.0 0.00 0.0 37.29 3.18 F
881 946 0.038343 CCCCGTTTTGACCATTGCTG 60.038 55.0 0.00 0.0 0.00 4.41 F
1368 2773 0.108774 GAGGCCCCATACAGCTAACC 59.891 60.0 0.00 0.0 0.00 2.85 F
1870 3292 0.900647 AGGCAAGCTCGGACTACAGT 60.901 55.0 0.00 0.0 0.00 3.55 F
3400 9454 0.250234 TGCATCCTCCTCCAGAAACG 59.750 55.0 0.00 0.0 0.00 3.60 F
3620 9690 0.179148 GTTTCCTTTTATGGCGGCGG 60.179 55.0 9.78 0.0 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1299 2704 0.525668 CCGCCTTCACGTAGCAGTAG 60.526 60.000 0.0 0.0 0.00 2.57 R
2569 5820 1.813862 CGCCCTTTCTTTGACTCCACA 60.814 52.381 0.0 0.0 0.00 4.17 R
3220 9265 1.046472 TCCCGCCGTTGAGGATGTAT 61.046 55.000 0.0 0.0 45.00 2.29 R
3600 9670 0.179148 CGCCGCCATAAAAGGAAACC 60.179 55.000 0.0 0.0 0.00 3.27 R
4461 10620 0.172803 GGACGACACCGAAGCTGTAT 59.827 55.000 0.0 0.0 39.50 2.29 R
5056 12311 0.878523 CGTTGGTGTCAAGCTCCGAA 60.879 55.000 0.0 0.0 32.92 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.680237 CAACGAGGGCCTGCACGA 62.680 66.667 12.95 0.00 0.00 4.35
24 25 4.681978 AACGAGGGCCTGCACGAC 62.682 66.667 12.95 0.00 0.00 4.34
26 27 4.457496 CGAGGGCCTGCACGACAT 62.457 66.667 12.95 0.00 0.00 3.06
27 28 2.512515 GAGGGCCTGCACGACATC 60.513 66.667 12.95 0.00 0.00 3.06
28 29 3.005539 AGGGCCTGCACGACATCT 61.006 61.111 4.50 0.00 0.00 2.90
29 30 2.821366 GGGCCTGCACGACATCTG 60.821 66.667 0.84 0.00 0.00 2.90
30 31 3.503363 GGCCTGCACGACATCTGC 61.503 66.667 0.00 0.00 35.03 4.26
31 32 3.503363 GCCTGCACGACATCTGCC 61.503 66.667 0.00 0.00 33.36 4.85
32 33 2.046988 CCTGCACGACATCTGCCA 60.047 61.111 0.00 0.00 33.36 4.92
33 34 2.393768 CCTGCACGACATCTGCCAC 61.394 63.158 0.00 0.00 33.36 5.01
34 35 2.733671 CTGCACGACATCTGCCACG 61.734 63.158 0.00 0.00 33.36 4.94
35 36 3.490759 GCACGACATCTGCCACGG 61.491 66.667 0.00 0.00 0.00 4.94
36 37 2.048222 CACGACATCTGCCACGGT 60.048 61.111 0.00 0.00 0.00 4.83
37 38 2.094659 CACGACATCTGCCACGGTC 61.095 63.158 0.00 0.00 0.00 4.79
38 39 2.276116 ACGACATCTGCCACGGTCT 61.276 57.895 0.00 0.00 0.00 3.85
39 40 1.517257 CGACATCTGCCACGGTCTC 60.517 63.158 0.00 0.00 0.00 3.36
40 41 1.153549 GACATCTGCCACGGTCTCC 60.154 63.158 0.00 0.00 0.00 3.71
59 60 2.835431 CGCCCGTCCTCTCCAGAT 60.835 66.667 0.00 0.00 0.00 2.90
60 61 2.851071 CGCCCGTCCTCTCCAGATC 61.851 68.421 0.00 0.00 0.00 2.75
61 62 1.456705 GCCCGTCCTCTCCAGATCT 60.457 63.158 0.00 0.00 0.00 2.75
62 63 1.460273 GCCCGTCCTCTCCAGATCTC 61.460 65.000 0.00 0.00 0.00 2.75
63 64 0.825840 CCCGTCCTCTCCAGATCTCC 60.826 65.000 0.00 0.00 0.00 3.71
64 65 1.169661 CCGTCCTCTCCAGATCTCCG 61.170 65.000 0.00 0.00 0.00 4.63
65 66 0.464735 CGTCCTCTCCAGATCTCCGT 60.465 60.000 0.00 0.00 0.00 4.69
66 67 1.314730 GTCCTCTCCAGATCTCCGTC 58.685 60.000 0.00 0.00 0.00 4.79
67 68 0.183971 TCCTCTCCAGATCTCCGTCC 59.816 60.000 0.00 0.00 0.00 4.79
68 69 1.169661 CCTCTCCAGATCTCCGTCCG 61.170 65.000 0.00 0.00 0.00 4.79
69 70 1.791103 CTCTCCAGATCTCCGTCCGC 61.791 65.000 0.00 0.00 0.00 5.54
70 71 3.187699 CTCCAGATCTCCGTCCGCG 62.188 68.421 0.00 0.00 37.95 6.46
71 72 3.209812 CCAGATCTCCGTCCGCGA 61.210 66.667 8.23 0.00 41.33 5.87
72 73 2.024871 CAGATCTCCGTCCGCGAC 59.975 66.667 8.23 2.72 41.33 5.19
94 95 4.410743 GCTTCGCCACAGCCTTGC 62.411 66.667 0.00 0.00 34.57 4.01
95 96 2.670934 CTTCGCCACAGCCTTGCT 60.671 61.111 0.00 0.00 40.77 3.91
96 97 2.669569 TTCGCCACAGCCTTGCTC 60.670 61.111 0.00 0.00 36.40 4.26
97 98 4.704833 TCGCCACAGCCTTGCTCC 62.705 66.667 0.00 0.00 36.40 4.70
99 100 2.362120 GCCACAGCCTTGCTCCAT 60.362 61.111 0.00 0.00 36.40 3.41
100 101 2.413142 GCCACAGCCTTGCTCCATC 61.413 63.158 0.00 0.00 36.40 3.51
101 102 1.751927 CCACAGCCTTGCTCCATCC 60.752 63.158 0.00 0.00 36.40 3.51
102 103 2.110967 CACAGCCTTGCTCCATCCG 61.111 63.158 0.00 0.00 36.40 4.18
103 104 2.293318 ACAGCCTTGCTCCATCCGA 61.293 57.895 0.00 0.00 36.40 4.55
104 105 1.523258 CAGCCTTGCTCCATCCGAG 60.523 63.158 0.00 0.00 36.40 4.63
112 113 1.227497 CTCCATCCGAGCCAGAAGC 60.227 63.158 0.00 0.00 44.25 3.86
121 122 3.588336 GCCAGAAGCAAGCAGGAG 58.412 61.111 0.00 0.00 42.97 3.69
122 123 2.045131 GCCAGAAGCAAGCAGGAGG 61.045 63.158 0.00 0.00 42.97 4.30
123 124 1.681666 CCAGAAGCAAGCAGGAGGA 59.318 57.895 0.00 0.00 0.00 3.71
124 125 0.392729 CCAGAAGCAAGCAGGAGGAG 60.393 60.000 0.00 0.00 0.00 3.69
125 126 0.612229 CAGAAGCAAGCAGGAGGAGA 59.388 55.000 0.00 0.00 0.00 3.71
126 127 0.903942 AGAAGCAAGCAGGAGGAGAG 59.096 55.000 0.00 0.00 0.00 3.20
127 128 0.901124 GAAGCAAGCAGGAGGAGAGA 59.099 55.000 0.00 0.00 0.00 3.10
128 129 0.903942 AAGCAAGCAGGAGGAGAGAG 59.096 55.000 0.00 0.00 0.00 3.20
129 130 0.977108 AGCAAGCAGGAGGAGAGAGG 60.977 60.000 0.00 0.00 0.00 3.69
130 131 1.970352 GCAAGCAGGAGGAGAGAGGG 61.970 65.000 0.00 0.00 0.00 4.30
131 132 0.325110 CAAGCAGGAGGAGAGAGGGA 60.325 60.000 0.00 0.00 0.00 4.20
132 133 0.032217 AAGCAGGAGGAGAGAGGGAG 60.032 60.000 0.00 0.00 0.00 4.30
133 134 1.457455 GCAGGAGGAGAGAGGGAGG 60.457 68.421 0.00 0.00 0.00 4.30
134 135 1.457455 CAGGAGGAGAGAGGGAGGC 60.457 68.421 0.00 0.00 0.00 4.70
135 136 2.520741 GGAGGAGAGAGGGAGGCG 60.521 72.222 0.00 0.00 0.00 5.52
136 137 2.520741 GAGGAGAGAGGGAGGCGG 60.521 72.222 0.00 0.00 0.00 6.13
137 138 3.351885 AGGAGAGAGGGAGGCGGT 61.352 66.667 0.00 0.00 0.00 5.68
138 139 3.151022 GGAGAGAGGGAGGCGGTG 61.151 72.222 0.00 0.00 0.00 4.94
139 140 3.151022 GAGAGAGGGAGGCGGTGG 61.151 72.222 0.00 0.00 0.00 4.61
140 141 3.966930 GAGAGAGGGAGGCGGTGGT 62.967 68.421 0.00 0.00 0.00 4.16
141 142 3.775654 GAGAGGGAGGCGGTGGTG 61.776 72.222 0.00 0.00 0.00 4.17
146 147 4.394712 GGAGGCGGTGGTGGTGAG 62.395 72.222 0.00 0.00 0.00 3.51
152 153 4.314440 GGTGGTGGTGAGCGAGCA 62.314 66.667 0.00 0.00 0.00 4.26
153 154 2.740055 GTGGTGGTGAGCGAGCAG 60.740 66.667 0.00 0.00 31.80 4.24
154 155 4.007644 TGGTGGTGAGCGAGCAGG 62.008 66.667 0.00 0.00 30.97 4.85
155 156 4.008933 GGTGGTGAGCGAGCAGGT 62.009 66.667 0.00 0.00 30.97 4.00
156 157 2.740055 GTGGTGAGCGAGCAGGTG 60.740 66.667 0.00 0.00 30.97 4.00
157 158 4.007644 TGGTGAGCGAGCAGGTGG 62.008 66.667 0.00 0.00 0.00 4.61
158 159 4.767255 GGTGAGCGAGCAGGTGGG 62.767 72.222 0.00 0.00 0.00 4.61
159 160 4.767255 GTGAGCGAGCAGGTGGGG 62.767 72.222 0.00 0.00 0.00 4.96
161 162 4.767255 GAGCGAGCAGGTGGGGTG 62.767 72.222 0.00 0.00 0.00 4.61
169 170 4.986774 AGGTGGGGTGGCCGGTTA 62.987 66.667 1.90 0.00 0.00 2.85
170 171 4.419921 GGTGGGGTGGCCGGTTAG 62.420 72.222 1.90 0.00 0.00 2.34
171 172 4.419921 GTGGGGTGGCCGGTTAGG 62.420 72.222 1.90 0.00 44.97 2.69
174 175 3.793888 GGGTGGCCGGTTAGGGAG 61.794 72.222 1.90 0.00 41.48 4.30
175 176 2.686106 GGTGGCCGGTTAGGGAGA 60.686 66.667 1.90 0.00 41.48 3.71
176 177 2.582978 GTGGCCGGTTAGGGAGAC 59.417 66.667 1.90 0.00 41.48 3.36
177 178 3.072468 TGGCCGGTTAGGGAGACG 61.072 66.667 1.90 0.00 41.48 4.18
178 179 2.757099 GGCCGGTTAGGGAGACGA 60.757 66.667 1.90 0.00 41.48 4.20
179 180 2.132352 GGCCGGTTAGGGAGACGAT 61.132 63.158 1.90 0.00 41.48 3.73
180 181 1.067582 GCCGGTTAGGGAGACGATG 59.932 63.158 1.90 0.00 41.48 3.84
181 182 1.389609 GCCGGTTAGGGAGACGATGA 61.390 60.000 1.90 0.00 41.48 2.92
182 183 0.669077 CCGGTTAGGGAGACGATGAG 59.331 60.000 0.00 0.00 35.97 2.90
183 184 0.669077 CGGTTAGGGAGACGATGAGG 59.331 60.000 0.00 0.00 0.00 3.86
184 185 0.389757 GGTTAGGGAGACGATGAGGC 59.610 60.000 0.00 0.00 0.00 4.70
185 186 1.112113 GTTAGGGAGACGATGAGGCA 58.888 55.000 0.00 0.00 0.00 4.75
186 187 1.067821 GTTAGGGAGACGATGAGGCAG 59.932 57.143 0.00 0.00 0.00 4.85
187 188 0.551396 TAGGGAGACGATGAGGCAGA 59.449 55.000 0.00 0.00 0.00 4.26
188 189 0.754957 AGGGAGACGATGAGGCAGAG 60.755 60.000 0.00 0.00 0.00 3.35
189 190 1.739049 GGAGACGATGAGGCAGAGG 59.261 63.158 0.00 0.00 0.00 3.69
190 191 0.753479 GGAGACGATGAGGCAGAGGA 60.753 60.000 0.00 0.00 0.00 3.71
191 192 0.667993 GAGACGATGAGGCAGAGGAG 59.332 60.000 0.00 0.00 0.00 3.69
192 193 0.257328 AGACGATGAGGCAGAGGAGA 59.743 55.000 0.00 0.00 0.00 3.71
193 194 0.667993 GACGATGAGGCAGAGGAGAG 59.332 60.000 0.00 0.00 0.00 3.20
194 195 0.257328 ACGATGAGGCAGAGGAGAGA 59.743 55.000 0.00 0.00 0.00 3.10
195 196 0.953727 CGATGAGGCAGAGGAGAGAG 59.046 60.000 0.00 0.00 0.00 3.20
196 197 1.331214 GATGAGGCAGAGGAGAGAGG 58.669 60.000 0.00 0.00 0.00 3.69
197 198 0.932955 ATGAGGCAGAGGAGAGAGGA 59.067 55.000 0.00 0.00 0.00 3.71
198 199 0.258484 TGAGGCAGAGGAGAGAGGAG 59.742 60.000 0.00 0.00 0.00 3.69
199 200 0.468029 GAGGCAGAGGAGAGAGGAGG 60.468 65.000 0.00 0.00 0.00 4.30
200 201 1.457455 GGCAGAGGAGAGAGGAGGG 60.457 68.421 0.00 0.00 0.00 4.30
201 202 1.618030 GCAGAGGAGAGAGGAGGGA 59.382 63.158 0.00 0.00 0.00 4.20
202 203 0.468029 GCAGAGGAGAGAGGAGGGAG 60.468 65.000 0.00 0.00 0.00 4.30
203 204 1.221635 CAGAGGAGAGAGGAGGGAGA 58.778 60.000 0.00 0.00 0.00 3.71
204 205 1.143684 CAGAGGAGAGAGGAGGGAGAG 59.856 61.905 0.00 0.00 0.00 3.20
205 206 0.478507 GAGGAGAGAGGAGGGAGAGG 59.521 65.000 0.00 0.00 0.00 3.69
206 207 0.998945 AGGAGAGAGGAGGGAGAGGG 60.999 65.000 0.00 0.00 0.00 4.30
207 208 0.996762 GGAGAGAGGAGGGAGAGGGA 60.997 65.000 0.00 0.00 0.00 4.20
208 209 0.478507 GAGAGAGGAGGGAGAGGGAG 59.521 65.000 0.00 0.00 0.00 4.30
209 210 0.998945 AGAGAGGAGGGAGAGGGAGG 60.999 65.000 0.00 0.00 0.00 4.30
210 211 2.123033 GAGGAGGGAGAGGGAGGC 60.123 72.222 0.00 0.00 0.00 4.70
211 212 4.150454 AGGAGGGAGAGGGAGGCG 62.150 72.222 0.00 0.00 0.00 5.52
212 213 4.144727 GGAGGGAGAGGGAGGCGA 62.145 72.222 0.00 0.00 0.00 5.54
213 214 2.200092 GAGGGAGAGGGAGGCGAT 59.800 66.667 0.00 0.00 0.00 4.58
214 215 1.458588 GAGGGAGAGGGAGGCGATT 60.459 63.158 0.00 0.00 0.00 3.34
215 216 1.003573 AGGGAGAGGGAGGCGATTT 59.996 57.895 0.00 0.00 0.00 2.17
216 217 1.147153 GGGAGAGGGAGGCGATTTG 59.853 63.158 0.00 0.00 0.00 2.32
217 218 1.147153 GGAGAGGGAGGCGATTTGG 59.853 63.158 0.00 0.00 0.00 3.28
218 219 1.147153 GAGAGGGAGGCGATTTGGG 59.853 63.158 0.00 0.00 0.00 4.12
219 220 2.193248 GAGGGAGGCGATTTGGGG 59.807 66.667 0.00 0.00 0.00 4.96
220 221 3.420482 AGGGAGGCGATTTGGGGG 61.420 66.667 0.00 0.00 0.00 5.40
221 222 3.416880 GGGAGGCGATTTGGGGGA 61.417 66.667 0.00 0.00 0.00 4.81
222 223 2.680965 GGAGGCGATTTGGGGGAA 59.319 61.111 0.00 0.00 0.00 3.97
223 224 1.000145 GGAGGCGATTTGGGGGAAA 60.000 57.895 0.00 0.00 0.00 3.13
224 225 0.397114 GGAGGCGATTTGGGGGAAAT 60.397 55.000 0.00 0.00 36.94 2.17
225 226 0.746659 GAGGCGATTTGGGGGAAATG 59.253 55.000 0.00 0.00 34.18 2.32
226 227 0.687427 AGGCGATTTGGGGGAAATGG 60.687 55.000 0.00 0.00 34.18 3.16
227 228 1.685355 GGCGATTTGGGGGAAATGGG 61.685 60.000 0.00 0.00 34.18 4.00
228 229 1.685355 GCGATTTGGGGGAAATGGGG 61.685 60.000 0.00 0.00 34.18 4.96
229 230 0.325203 CGATTTGGGGGAAATGGGGT 60.325 55.000 0.00 0.00 34.18 4.95
230 231 1.203237 GATTTGGGGGAAATGGGGTG 58.797 55.000 0.00 0.00 34.18 4.61
231 232 0.253113 ATTTGGGGGAAATGGGGTGG 60.253 55.000 0.00 0.00 32.69 4.61
232 233 2.408495 TTTGGGGGAAATGGGGTGGG 62.408 60.000 0.00 0.00 0.00 4.61
233 234 4.796775 GGGGGAAATGGGGTGGGC 62.797 72.222 0.00 0.00 0.00 5.36
235 236 4.055227 GGGAAATGGGGTGGGCGA 62.055 66.667 0.00 0.00 0.00 5.54
236 237 2.278738 GGAAATGGGGTGGGCGAT 59.721 61.111 0.00 0.00 0.00 4.58
237 238 2.127232 GGAAATGGGGTGGGCGATG 61.127 63.158 0.00 0.00 0.00 3.84
238 239 2.759560 AAATGGGGTGGGCGATGC 60.760 61.111 0.00 0.00 0.00 3.91
261 262 4.097361 GTGCCCGTTCCCCTCCTC 62.097 72.222 0.00 0.00 0.00 3.71
262 263 4.332543 TGCCCGTTCCCCTCCTCT 62.333 66.667 0.00 0.00 0.00 3.69
263 264 3.787001 GCCCGTTCCCCTCCTCTG 61.787 72.222 0.00 0.00 0.00 3.35
264 265 2.038975 CCCGTTCCCCTCCTCTGA 59.961 66.667 0.00 0.00 0.00 3.27
265 266 1.383248 CCCGTTCCCCTCCTCTGAT 60.383 63.158 0.00 0.00 0.00 2.90
266 267 0.105658 CCCGTTCCCCTCCTCTGATA 60.106 60.000 0.00 0.00 0.00 2.15
267 268 1.041437 CCGTTCCCCTCCTCTGATAC 58.959 60.000 0.00 0.00 0.00 2.24
268 269 1.411787 CCGTTCCCCTCCTCTGATACT 60.412 57.143 0.00 0.00 0.00 2.12
269 270 2.158505 CCGTTCCCCTCCTCTGATACTA 60.159 54.545 0.00 0.00 0.00 1.82
270 271 3.150767 CGTTCCCCTCCTCTGATACTAG 58.849 54.545 0.00 0.00 0.00 2.57
271 272 3.502356 GTTCCCCTCCTCTGATACTAGG 58.498 54.545 0.00 0.00 0.00 3.02
272 273 2.074579 TCCCCTCCTCTGATACTAGGG 58.925 57.143 0.00 0.00 45.57 3.53
273 274 1.551329 CCCCTCCTCTGATACTAGGGC 60.551 61.905 0.00 0.00 44.79 5.19
274 275 1.551329 CCCTCCTCTGATACTAGGGCC 60.551 61.905 0.00 0.00 40.51 5.80
275 276 1.431243 CCTCCTCTGATACTAGGGCCT 59.569 57.143 12.58 12.58 33.40 5.19
276 277 2.158234 CCTCCTCTGATACTAGGGCCTT 60.158 54.545 13.45 0.00 33.40 4.35
277 278 3.582164 CTCCTCTGATACTAGGGCCTTT 58.418 50.000 13.45 1.05 33.40 3.11
278 279 3.970640 CTCCTCTGATACTAGGGCCTTTT 59.029 47.826 13.45 0.61 33.40 2.27
279 280 4.371681 TCCTCTGATACTAGGGCCTTTTT 58.628 43.478 13.45 0.00 33.40 1.94
336 337 4.646877 GGGGAAACGGAACCGCCA 62.647 66.667 13.32 0.00 44.19 5.69
337 338 3.053896 GGGAAACGGAACCGCCAG 61.054 66.667 13.32 0.00 44.19 4.85
338 339 3.733960 GGAAACGGAACCGCCAGC 61.734 66.667 13.32 0.86 44.19 4.85
339 340 2.668550 GAAACGGAACCGCCAGCT 60.669 61.111 13.32 0.00 44.19 4.24
340 341 2.203294 AAACGGAACCGCCAGCTT 60.203 55.556 13.32 0.00 44.19 3.74
341 342 0.952010 GAAACGGAACCGCCAGCTTA 60.952 55.000 13.32 0.00 44.19 3.09
342 343 0.322187 AAACGGAACCGCCAGCTTAT 60.322 50.000 13.32 0.00 44.19 1.73
343 344 0.538118 AACGGAACCGCCAGCTTATA 59.462 50.000 13.32 0.00 44.19 0.98
344 345 0.538118 ACGGAACCGCCAGCTTATAA 59.462 50.000 13.32 0.00 44.19 0.98
345 346 1.140252 ACGGAACCGCCAGCTTATAAT 59.860 47.619 13.32 0.00 44.19 1.28
346 347 2.366266 ACGGAACCGCCAGCTTATAATA 59.634 45.455 13.32 0.00 44.19 0.98
347 348 2.735134 CGGAACCGCCAGCTTATAATAC 59.265 50.000 0.00 0.00 35.94 1.89
348 349 3.735591 GGAACCGCCAGCTTATAATACA 58.264 45.455 0.00 0.00 36.34 2.29
349 350 3.497262 GGAACCGCCAGCTTATAATACAC 59.503 47.826 0.00 0.00 36.34 2.90
350 351 2.750948 ACCGCCAGCTTATAATACACG 58.249 47.619 0.00 0.00 0.00 4.49
351 352 2.101917 ACCGCCAGCTTATAATACACGT 59.898 45.455 0.00 0.00 0.00 4.49
352 353 3.318839 ACCGCCAGCTTATAATACACGTA 59.681 43.478 0.00 0.00 0.00 3.57
353 354 3.671928 CCGCCAGCTTATAATACACGTAC 59.328 47.826 0.00 0.00 0.00 3.67
354 355 4.292599 CGCCAGCTTATAATACACGTACA 58.707 43.478 0.00 0.00 0.00 2.90
355 356 4.147653 CGCCAGCTTATAATACACGTACAC 59.852 45.833 0.00 0.00 0.00 2.90
356 357 4.147653 GCCAGCTTATAATACACGTACACG 59.852 45.833 0.00 0.00 46.33 4.49
374 375 1.746760 CGTCCGGCGTACAATAGTAC 58.253 55.000 6.01 0.00 45.67 2.73
383 384 0.746063 TACAATAGTACACGGGCCGG 59.254 55.000 31.78 21.03 0.00 6.13
384 385 1.259840 ACAATAGTACACGGGCCGGT 61.260 55.000 31.78 25.46 0.00 5.28
385 386 0.808453 CAATAGTACACGGGCCGGTG 60.808 60.000 34.59 34.59 43.54 4.94
386 387 2.582734 AATAGTACACGGGCCGGTGC 62.583 60.000 35.73 25.63 41.65 5.01
397 398 4.063967 CCGGTGCAGGCTCGTACA 62.064 66.667 0.00 0.00 0.00 2.90
398 399 2.507102 CGGTGCAGGCTCGTACAG 60.507 66.667 0.00 0.96 0.00 2.74
399 400 2.125512 GGTGCAGGCTCGTACAGG 60.126 66.667 0.00 0.00 0.00 4.00
400 401 2.125512 GTGCAGGCTCGTACAGGG 60.126 66.667 0.00 0.00 0.00 4.45
407 408 1.355916 GCTCGTACAGGGCTCTACG 59.644 63.158 2.33 2.33 44.82 3.51
408 409 1.094073 GCTCGTACAGGGCTCTACGA 61.094 60.000 11.00 11.00 44.82 3.43
409 410 0.656785 CTCGTACAGGGCTCTACGAC 59.343 60.000 7.52 0.00 39.59 4.34
410 411 0.251354 TCGTACAGGGCTCTACGACT 59.749 55.000 7.52 0.00 39.59 4.18
411 412 0.656785 CGTACAGGGCTCTACGACTC 59.343 60.000 2.60 0.00 38.08 3.36
412 413 0.656785 GTACAGGGCTCTACGACTCG 59.343 60.000 0.00 0.00 0.00 4.18
413 414 0.251354 TACAGGGCTCTACGACTCGT 59.749 55.000 9.45 9.45 44.35 4.18
414 415 1.025647 ACAGGGCTCTACGACTCGTC 61.026 60.000 7.52 0.00 41.54 4.20
415 416 0.745128 CAGGGCTCTACGACTCGTCT 60.745 60.000 7.52 0.00 41.54 4.18
416 417 0.829333 AGGGCTCTACGACTCGTCTA 59.171 55.000 7.52 0.00 41.54 2.59
417 418 0.936600 GGGCTCTACGACTCGTCTAC 59.063 60.000 7.52 0.00 41.54 2.59
418 419 0.576328 GGCTCTACGACTCGTCTACG 59.424 60.000 7.52 0.00 41.54 3.51
419 420 0.043138 GCTCTACGACTCGTCTACGC 60.043 60.000 7.52 3.59 41.54 4.42
420 421 0.226734 CTCTACGACTCGTCTACGCG 59.773 60.000 7.52 3.53 41.54 6.01
421 422 1.366262 CTACGACTCGTCTACGCGC 60.366 63.158 5.73 0.00 41.54 6.86
422 423 2.973716 CTACGACTCGTCTACGCGCG 62.974 65.000 30.96 30.96 41.54 6.86
424 425 4.517703 GACTCGTCTACGCGCGCT 62.518 66.667 32.58 19.60 39.60 5.92
425 426 4.517703 ACTCGTCTACGCGCGCTC 62.518 66.667 32.58 16.32 39.60 5.03
426 427 4.225340 CTCGTCTACGCGCGCTCT 62.225 66.667 32.58 14.00 39.60 4.09
427 428 2.868173 CTCGTCTACGCGCGCTCTA 61.868 63.158 32.58 14.46 39.60 2.43
428 429 2.717898 CGTCTACGCGCGCTCTAC 60.718 66.667 32.58 21.08 0.00 2.59
438 439 3.449227 CGCTCTACGCCCACCTGA 61.449 66.667 0.00 0.00 34.21 3.86
439 440 2.978824 GCTCTACGCCCACCTGAA 59.021 61.111 0.00 0.00 0.00 3.02
440 441 1.295423 GCTCTACGCCCACCTGAAA 59.705 57.895 0.00 0.00 0.00 2.69
441 442 0.107654 GCTCTACGCCCACCTGAAAT 60.108 55.000 0.00 0.00 0.00 2.17
442 443 1.656652 CTCTACGCCCACCTGAAATG 58.343 55.000 0.00 0.00 0.00 2.32
443 444 1.207089 CTCTACGCCCACCTGAAATGA 59.793 52.381 0.00 0.00 0.00 2.57
444 445 1.066430 TCTACGCCCACCTGAAATGAC 60.066 52.381 0.00 0.00 0.00 3.06
445 446 0.035820 TACGCCCACCTGAAATGACC 60.036 55.000 0.00 0.00 0.00 4.02
446 447 1.303236 CGCCCACCTGAAATGACCA 60.303 57.895 0.00 0.00 0.00 4.02
447 448 0.680921 CGCCCACCTGAAATGACCAT 60.681 55.000 0.00 0.00 0.00 3.55
448 449 1.106285 GCCCACCTGAAATGACCATC 58.894 55.000 0.00 0.00 0.00 3.51
449 450 1.382522 CCCACCTGAAATGACCATCG 58.617 55.000 0.00 0.00 0.00 3.84
450 451 1.340017 CCCACCTGAAATGACCATCGT 60.340 52.381 0.00 0.00 0.00 3.73
451 452 2.093181 CCCACCTGAAATGACCATCGTA 60.093 50.000 0.00 0.00 0.00 3.43
452 453 2.936498 CCACCTGAAATGACCATCGTAC 59.064 50.000 0.00 0.00 0.00 3.67
453 454 2.936498 CACCTGAAATGACCATCGTACC 59.064 50.000 0.00 0.00 0.00 3.34
454 455 2.093128 ACCTGAAATGACCATCGTACCC 60.093 50.000 0.00 0.00 0.00 3.69
455 456 2.561569 CTGAAATGACCATCGTACCCC 58.438 52.381 0.00 0.00 0.00 4.95
456 457 2.170607 CTGAAATGACCATCGTACCCCT 59.829 50.000 0.00 0.00 0.00 4.79
457 458 2.169769 TGAAATGACCATCGTACCCCTC 59.830 50.000 0.00 0.00 0.00 4.30
458 459 0.750850 AATGACCATCGTACCCCTCG 59.249 55.000 0.00 0.00 0.00 4.63
459 460 0.396695 ATGACCATCGTACCCCTCGT 60.397 55.000 0.00 0.00 0.00 4.18
460 461 0.612732 TGACCATCGTACCCCTCGTT 60.613 55.000 0.00 0.00 0.00 3.85
461 462 1.340893 TGACCATCGTACCCCTCGTTA 60.341 52.381 0.00 0.00 0.00 3.18
462 463 1.066152 GACCATCGTACCCCTCGTTAC 59.934 57.143 0.00 0.00 0.00 2.50
463 464 0.029834 CCATCGTACCCCTCGTTACG 59.970 60.000 0.00 0.00 37.29 3.18
464 465 1.016627 CATCGTACCCCTCGTTACGA 58.983 55.000 7.39 7.39 46.70 3.43
465 466 1.401552 CATCGTACCCCTCGTTACGAA 59.598 52.381 9.23 0.00 45.96 3.85
466 467 0.802494 TCGTACCCCTCGTTACGAAC 59.198 55.000 9.23 2.63 41.20 3.95
467 468 0.179163 CGTACCCCTCGTTACGAACC 60.179 60.000 9.23 0.00 38.08 3.62
468 469 0.179163 GTACCCCTCGTTACGAACCG 60.179 60.000 9.23 1.12 34.74 4.44
469 470 0.608035 TACCCCTCGTTACGAACCGT 60.608 55.000 9.23 7.15 44.35 4.83
470 471 1.153958 CCCCTCGTTACGAACCGTC 60.154 63.158 9.23 0.00 41.54 4.79
471 472 1.580942 CCCTCGTTACGAACCGTCA 59.419 57.895 9.23 0.00 41.54 4.35
472 473 0.171903 CCCTCGTTACGAACCGTCAT 59.828 55.000 9.23 0.00 41.54 3.06
473 474 1.542544 CCTCGTTACGAACCGTCATC 58.457 55.000 9.23 0.00 41.54 2.92
474 475 1.177668 CTCGTTACGAACCGTCATCG 58.822 55.000 9.23 0.00 45.47 3.84
475 476 0.795698 TCGTTACGAACCGTCATCGA 59.204 50.000 4.50 0.00 42.76 3.59
476 477 0.903187 CGTTACGAACCGTCATCGAC 59.097 55.000 0.00 0.00 42.76 4.20
477 478 4.893725 TCGTTACGAACCGTCATCGACG 62.894 54.545 4.50 9.48 43.31 5.12
486 487 2.582959 GTCATCGACGCATCTGGAC 58.417 57.895 0.00 0.00 0.00 4.02
487 488 0.872021 GTCATCGACGCATCTGGACC 60.872 60.000 0.00 0.00 0.00 4.46
488 489 1.946156 CATCGACGCATCTGGACCG 60.946 63.158 0.00 0.00 0.00 4.79
489 490 2.415608 ATCGACGCATCTGGACCGT 61.416 57.895 0.00 0.00 37.99 4.83
490 491 2.337749 ATCGACGCATCTGGACCGTC 62.338 60.000 12.45 12.45 45.56 4.79
491 492 2.202756 GACGCATCTGGACCGTCC 60.203 66.667 10.96 10.96 43.89 4.79
492 493 2.680352 ACGCATCTGGACCGTCCT 60.680 61.111 18.54 0.00 37.46 3.85
531 532 4.619227 CGTTGCCCGTGGTGGTCT 62.619 66.667 0.00 0.00 35.15 3.85
537 538 1.515521 GCCCGTGGTGGTCTTTCTTG 61.516 60.000 0.00 0.00 35.15 3.02
538 539 1.515521 CCCGTGGTGGTCTTTCTTGC 61.516 60.000 0.00 0.00 35.15 4.01
542 543 2.548067 CGTGGTGGTCTTTCTTGCTACT 60.548 50.000 0.00 0.00 0.00 2.57
543 544 3.305813 CGTGGTGGTCTTTCTTGCTACTA 60.306 47.826 0.00 0.00 0.00 1.82
544 545 3.995048 GTGGTGGTCTTTCTTGCTACTAC 59.005 47.826 0.00 0.00 0.00 2.73
546 547 5.047519 GTGGTGGTCTTTCTTGCTACTACTA 60.048 44.000 0.00 0.00 0.00 1.82
549 550 5.862860 GTGGTCTTTCTTGCTACTACTACAC 59.137 44.000 0.00 0.00 0.00 2.90
651 655 2.288825 TGATGACTTGACTGTTCCGTCC 60.289 50.000 0.00 0.00 32.97 4.79
653 657 1.760613 TGACTTGACTGTTCCGTCCTT 59.239 47.619 0.00 0.00 32.97 3.36
749 777 3.052793 TGGTAGGAAAAGTTGGACCCAAA 60.053 43.478 2.62 0.00 37.70 3.28
750 778 4.157246 GGTAGGAAAAGTTGGACCCAAAT 58.843 43.478 2.62 0.00 37.70 2.32
751 779 5.162969 TGGTAGGAAAAGTTGGACCCAAATA 60.163 40.000 2.62 0.00 37.70 1.40
752 780 5.417894 GGTAGGAAAAGTTGGACCCAAATAG 59.582 44.000 2.62 0.00 37.70 1.73
753 781 5.074746 AGGAAAAGTTGGACCCAAATAGT 57.925 39.130 2.62 0.00 37.70 2.12
754 782 6.208840 AGGAAAAGTTGGACCCAAATAGTA 57.791 37.500 2.62 0.00 37.70 1.82
756 784 5.184479 GGAAAAGTTGGACCCAAATAGTACC 59.816 44.000 2.62 1.93 37.70 3.34
757 785 5.327737 AAAGTTGGACCCAAATAGTACCA 57.672 39.130 2.62 0.00 37.70 3.25
758 786 4.569719 AGTTGGACCCAAATAGTACCAG 57.430 45.455 2.62 0.00 37.70 4.00
765 793 1.499007 CCAAATAGTACCAGGCCCCAT 59.501 52.381 0.00 0.00 0.00 4.00
827 855 3.249559 CAGAAAACACAACAGAGAGAGGC 59.750 47.826 0.00 0.00 0.00 4.70
832 860 3.620488 ACACAACAGAGAGAGGCAAAAA 58.380 40.909 0.00 0.00 0.00 1.94
841 869 5.461078 CAGAGAGAGGCAAAAACAAACATTG 59.539 40.000 0.00 0.00 0.00 2.82
848 913 3.356145 CAAAAACAAACATTGCTGCTGC 58.644 40.909 8.89 8.89 40.20 5.25
880 945 0.469144 ACCCCGTTTTGACCATTGCT 60.469 50.000 0.00 0.00 0.00 3.91
881 946 0.038343 CCCCGTTTTGACCATTGCTG 60.038 55.000 0.00 0.00 0.00 4.41
883 948 1.335872 CCCGTTTTGACCATTGCTGTC 60.336 52.381 0.00 0.00 0.00 3.51
885 950 1.002900 CGTTTTGACCATTGCTGTCGT 60.003 47.619 0.00 0.00 35.46 4.34
886 951 2.222213 CGTTTTGACCATTGCTGTCGTA 59.778 45.455 0.00 0.00 35.46 3.43
887 952 3.551551 GTTTTGACCATTGCTGTCGTAC 58.448 45.455 0.00 0.00 35.46 3.67
938 1096 0.604511 GTTTTCCACACGGTCCCGAT 60.605 55.000 13.54 0.00 42.83 4.18
939 1097 0.108963 TTTTCCACACGGTCCCGATT 59.891 50.000 13.54 0.00 42.83 3.34
940 1098 0.320946 TTTCCACACGGTCCCGATTC 60.321 55.000 13.54 0.00 42.83 2.52
941 1099 2.125269 CCACACGGTCCCGATTCC 60.125 66.667 13.54 0.00 42.83 3.01
942 1100 2.125269 CACACGGTCCCGATTCCC 60.125 66.667 13.54 0.00 42.83 3.97
962 1120 3.119388 CCCGAACAGCATTTTCACATCAT 60.119 43.478 0.00 0.00 0.00 2.45
963 1121 4.100529 CCGAACAGCATTTTCACATCATC 58.899 43.478 0.00 0.00 0.00 2.92
981 1139 0.733150 TCACACTCCATCGTCGCTAG 59.267 55.000 0.00 0.00 0.00 3.42
989 1147 1.336332 CCATCGTCGCTAGGATTCCAG 60.336 57.143 5.29 1.90 0.00 3.86
1013 2418 2.430610 GGCGGATGAGGCTCTCTGT 61.431 63.158 16.72 0.00 0.00 3.41
1299 2704 1.447314 CTCCTTCGTAACCACCGGC 60.447 63.158 0.00 0.00 0.00 6.13
1365 2770 1.837051 CCGAGGCCCCATACAGCTA 60.837 63.158 0.00 0.00 0.00 3.32
1368 2773 0.108774 GAGGCCCCATACAGCTAACC 59.891 60.000 0.00 0.00 0.00 2.85
1394 2808 3.579709 ACGTGAGACATGTTCATCACTC 58.420 45.455 24.90 16.19 39.89 3.51
1410 2824 5.360714 TCATCACTCTTTTCTTTTGCTTGGT 59.639 36.000 0.00 0.00 0.00 3.67
1412 2826 6.131544 TCACTCTTTTCTTTTGCTTGGTAC 57.868 37.500 0.00 0.00 0.00 3.34
1413 2827 5.885912 TCACTCTTTTCTTTTGCTTGGTACT 59.114 36.000 0.00 0.00 0.00 2.73
1414 2828 5.973565 CACTCTTTTCTTTTGCTTGGTACTG 59.026 40.000 0.00 0.00 0.00 2.74
1420 2834 3.383185 TCTTTTGCTTGGTACTGGGTTTG 59.617 43.478 0.00 0.00 0.00 2.93
1421 2835 2.738587 TTGCTTGGTACTGGGTTTGA 57.261 45.000 0.00 0.00 0.00 2.69
1425 2839 3.320541 TGCTTGGTACTGGGTTTGATTTG 59.679 43.478 0.00 0.00 0.00 2.32
1870 3292 0.900647 AGGCAAGCTCGGACTACAGT 60.901 55.000 0.00 0.00 0.00 3.55
2877 8916 1.005450 TCCCCTTGATTTGTACCCTGC 59.995 52.381 0.00 0.00 0.00 4.85
2881 8920 3.193479 CCCTTGATTTGTACCCTGCTTTC 59.807 47.826 0.00 0.00 0.00 2.62
2882 8921 4.082125 CCTTGATTTGTACCCTGCTTTCT 58.918 43.478 0.00 0.00 0.00 2.52
2891 8930 3.425162 ACCCTGCTTTCTCTTACAAGG 57.575 47.619 0.00 0.00 0.00 3.61
2900 8939 5.049336 GCTTTCTCTTACAAGGTGAACTTCC 60.049 44.000 0.00 0.00 37.29 3.46
2902 8941 5.623956 TCTCTTACAAGGTGAACTTCCAA 57.376 39.130 0.00 0.00 37.29 3.53
2905 8944 7.741785 TCTCTTACAAGGTGAACTTCCAATTA 58.258 34.615 0.00 0.00 37.29 1.40
2906 8945 8.383175 TCTCTTACAAGGTGAACTTCCAATTAT 58.617 33.333 0.00 0.00 37.29 1.28
2908 8947 9.010029 TCTTACAAGGTGAACTTCCAATTATTC 57.990 33.333 0.00 0.00 37.29 1.75
2909 8948 8.934023 TTACAAGGTGAACTTCCAATTATTCT 57.066 30.769 0.00 0.00 37.29 2.40
2940 8982 5.782047 TGAATGAACTTCAATTCGGCAAAT 58.218 33.333 0.00 0.00 40.92 2.32
2943 8985 6.710692 ATGAACTTCAATTCGGCAAATTTC 57.289 33.333 0.00 0.00 35.32 2.17
2944 8986 4.987912 TGAACTTCAATTCGGCAAATTTCC 59.012 37.500 0.00 0.00 35.32 3.13
2945 8987 4.871933 ACTTCAATTCGGCAAATTTCCT 57.128 36.364 0.00 0.00 35.32 3.36
2946 8988 4.559153 ACTTCAATTCGGCAAATTTCCTG 58.441 39.130 0.00 0.00 35.32 3.86
2947 8989 2.958213 TCAATTCGGCAAATTTCCTGC 58.042 42.857 0.00 0.00 35.32 4.85
2948 8990 2.562298 TCAATTCGGCAAATTTCCTGCT 59.438 40.909 0.92 0.00 39.82 4.24
2949 8991 3.761218 TCAATTCGGCAAATTTCCTGCTA 59.239 39.130 0.92 0.00 39.82 3.49
2950 8992 3.782889 ATTCGGCAAATTTCCTGCTAC 57.217 42.857 0.92 0.00 39.82 3.58
3220 9265 2.666207 GGGTACGGCATGACCACA 59.334 61.111 0.00 0.00 39.03 4.17
3396 9450 0.633378 TCTCTGCATCCTCCTCCAGA 59.367 55.000 0.00 0.00 33.65 3.86
3400 9454 0.250234 TGCATCCTCCTCCAGAAACG 59.750 55.000 0.00 0.00 0.00 3.60
3401 9455 0.250513 GCATCCTCCTCCAGAAACGT 59.749 55.000 0.00 0.00 0.00 3.99
3403 9457 0.818296 ATCCTCCTCCAGAAACGTCG 59.182 55.000 0.00 0.00 0.00 5.12
3435 9498 1.729149 GCCGTGTCTTTACATGCTTGC 60.729 52.381 0.00 0.00 40.67 4.01
3436 9499 1.135689 CCGTGTCTTTACATGCTTGCC 60.136 52.381 0.00 0.00 40.67 4.52
3450 9513 1.641577 CTTGCCGTTACAGGAGCTAC 58.358 55.000 0.00 0.00 0.00 3.58
3490 9553 6.090358 GCATTATTCACATGCTAATCCAATGC 59.910 38.462 16.98 16.98 43.26 3.56
3540 9610 4.148825 CTCCGCCTCCGTCAAGGG 62.149 72.222 0.00 0.00 41.52 3.95
3600 9670 3.303881 TCATTATCGGCTCCTTGATCG 57.696 47.619 0.00 0.00 0.00 3.69
3620 9690 0.179148 GTTTCCTTTTATGGCGGCGG 60.179 55.000 9.78 0.00 0.00 6.13
3623 9693 3.199190 CTTTTATGGCGGCGGCGA 61.199 61.111 36.87 16.40 41.24 5.54
3624 9694 3.449095 CTTTTATGGCGGCGGCGAC 62.449 63.158 36.87 34.81 41.24 5.19
3873 9957 4.287067 ACCTTCAAGTTGCTATCAAGAGGA 59.713 41.667 0.00 0.00 31.93 3.71
4045 10129 1.712018 CTCGACGGGCATCTGTACGA 61.712 60.000 0.00 0.00 33.87 3.43
4071 10155 2.845752 TAACGTCGTGCTCCCATGGC 62.846 60.000 6.09 0.00 0.00 4.40
4107 10191 1.185315 CCCGCCCATCACAGAAAAAT 58.815 50.000 0.00 0.00 0.00 1.82
4128 10282 2.613595 TCATGAGCACCGCAAATGTATC 59.386 45.455 0.00 0.00 0.00 2.24
4129 10283 1.006086 TGAGCACCGCAAATGTATCG 58.994 50.000 0.00 0.00 0.00 2.92
4133 10287 1.529010 GCACCGCAAATGTATCGTGAC 60.529 52.381 0.00 0.00 0.00 3.67
4148 10302 1.065701 CGTGACTCTCCGATTCCGATT 59.934 52.381 0.00 0.00 38.22 3.34
4149 10303 2.479730 CGTGACTCTCCGATTCCGATTT 60.480 50.000 0.00 0.00 38.22 2.17
4157 10311 2.017049 CCGATTCCGATTTCTTTGCCT 58.983 47.619 0.00 0.00 38.22 4.75
4159 10313 3.625764 CCGATTCCGATTTCTTTGCCTTA 59.374 43.478 0.00 0.00 38.22 2.69
4164 10318 7.042051 CGATTCCGATTTCTTTGCCTTATAAGA 60.042 37.037 14.28 0.00 38.22 2.10
4225 10384 2.100584 AGACATGAGATTCTGCTCGGAC 59.899 50.000 0.00 0.00 37.73 4.79
4302 10461 2.028748 GGACATCAAGCCAAGCAACATT 60.029 45.455 0.00 0.00 0.00 2.71
4326 10485 1.199327 CTAGACTCGTCGTTCAAGGCA 59.801 52.381 0.00 0.00 34.09 4.75
4335 10494 1.507141 CGTTCAAGGCAAAGCTCGGT 61.507 55.000 0.00 0.00 0.00 4.69
4365 10524 2.034879 CGCCAAGCTCGTCCAACAT 61.035 57.895 0.00 0.00 0.00 2.71
4461 10620 1.191535 CCAACCCCGAGTCAGATGTA 58.808 55.000 0.00 0.00 0.00 2.29
4521 10733 4.404098 CGGCCTGTGGTGGTACCC 62.404 72.222 10.07 0.11 37.50 3.69
4606 10833 3.135056 ATTCTAGACGCCGCCGACC 62.135 63.158 0.00 0.00 38.29 4.79
4716 10943 1.032794 CGTCTATCAGGCAGGCTGTA 58.967 55.000 22.68 13.35 0.00 2.74
4738 10965 3.923864 TGTTGCGGTCAGAGGCGT 61.924 61.111 0.00 0.00 0.00 5.68
4803 11641 2.280524 CCGGTTGGCACACGAAGA 60.281 61.111 11.11 0.00 39.29 2.87
4858 12108 3.865446 CAGTGGCACTTCTACATCATCA 58.135 45.455 19.43 0.00 0.00 3.07
4934 12187 5.947228 TTTCTATGACAAGCTTGTTCTGG 57.053 39.130 31.58 22.15 42.43 3.86
4936 12189 4.825422 TCTATGACAAGCTTGTTCTGGAG 58.175 43.478 31.58 22.22 42.43 3.86
4953 12206 8.564574 TGTTCTGGAGTGTTTATTTATGTGTTC 58.435 33.333 0.00 0.00 0.00 3.18
5056 12311 8.416329 ACAAAACTGAAAAGATAGCAGAACATT 58.584 29.630 0.00 0.00 33.94 2.71
5086 12712 0.386476 ACACCAACGCTCGTCAACTA 59.614 50.000 0.00 0.00 0.00 2.24
5189 13073 0.322456 TATGCAGCTTTGCGGACCTT 60.322 50.000 0.00 0.00 37.69 3.50
5228 13112 1.802365 GTGAAGCCGTTACCGTTGAAT 59.198 47.619 0.00 0.00 0.00 2.57
5399 13284 0.463295 CCACAATCTGCATCCGCTCT 60.463 55.000 0.00 0.00 39.64 4.09
5557 13442 1.006102 CCGACCATAGGACCGATGC 60.006 63.158 8.99 0.00 0.00 3.91
5800 13771 4.787280 CCGCCAGGGACTCCTCCT 62.787 72.222 0.00 0.00 42.67 3.69
5806 13777 0.336737 CAGGGACTCCTCCTGTAGGT 59.663 60.000 2.21 0.00 46.62 3.08
5807 13778 1.569548 CAGGGACTCCTCCTGTAGGTA 59.430 57.143 2.21 0.00 46.62 3.08
5809 13780 1.133419 GGGACTCCTCCTGTAGGTAGG 60.133 61.905 9.04 9.04 46.62 3.18
5810 13781 1.133419 GGACTCCTCCTGTAGGTAGGG 60.133 61.905 13.15 8.10 46.62 3.53
5813 13784 0.941963 TCCTCCTGTAGGTAGGGCAT 59.058 55.000 13.15 0.00 46.62 4.40
5814 13785 1.294068 TCCTCCTGTAGGTAGGGCATT 59.706 52.381 13.15 0.00 46.62 3.56
5816 13787 3.051650 TCCTCCTGTAGGTAGGGCATTTA 60.052 47.826 13.15 0.00 46.62 1.40
5817 13788 3.910627 CCTCCTGTAGGTAGGGCATTTAT 59.089 47.826 0.00 0.00 40.94 1.40
5818 13789 4.263068 CCTCCTGTAGGTAGGGCATTTATG 60.263 50.000 0.00 0.00 40.94 1.90
5819 13790 4.303794 TCCTGTAGGTAGGGCATTTATGT 58.696 43.478 0.00 0.00 38.42 2.29
5821 13792 4.141482 CCTGTAGGTAGGGCATTTATGTGT 60.141 45.833 0.00 0.00 34.06 3.72
5822 13793 5.437060 CTGTAGGTAGGGCATTTATGTGTT 58.563 41.667 0.00 0.00 0.00 3.32
5824 13795 4.584638 AGGTAGGGCATTTATGTGTTCA 57.415 40.909 0.00 0.00 0.00 3.18
5825 13796 4.929479 AGGTAGGGCATTTATGTGTTCAA 58.071 39.130 0.00 0.00 0.00 2.69
5826 13797 5.518865 AGGTAGGGCATTTATGTGTTCAAT 58.481 37.500 0.00 0.00 0.00 2.57
5827 13798 5.957774 AGGTAGGGCATTTATGTGTTCAATT 59.042 36.000 0.00 0.00 0.00 2.32
5828 13799 6.042143 GGTAGGGCATTTATGTGTTCAATTG 58.958 40.000 0.00 0.00 0.00 2.32
5829 13800 5.999205 AGGGCATTTATGTGTTCAATTGA 57.001 34.783 3.38 3.38 0.00 2.57
5830 13801 6.549433 AGGGCATTTATGTGTTCAATTGAT 57.451 33.333 9.40 0.00 0.00 2.57
5831 13802 6.342906 AGGGCATTTATGTGTTCAATTGATG 58.657 36.000 9.40 2.29 0.00 3.07
5832 13803 6.154877 AGGGCATTTATGTGTTCAATTGATGA 59.845 34.615 9.40 0.00 35.85 2.92
5834 13805 7.259882 GGCATTTATGTGTTCAATTGATGAGA 58.740 34.615 9.40 0.00 39.77 3.27
5835 13806 7.760794 GGCATTTATGTGTTCAATTGATGAGAA 59.239 33.333 9.40 0.00 39.77 2.87
5836 13807 9.142515 GCATTTATGTGTTCAATTGATGAGAAA 57.857 29.630 9.40 6.17 39.77 2.52
5897 13868 9.872684 AAATTGTAATGGATCTATGTTCCAGAT 57.127 29.630 0.00 0.00 46.06 2.90
5898 13869 9.512588 AATTGTAATGGATCTATGTTCCAGATC 57.487 33.333 4.15 4.15 46.06 2.75
5899 13870 7.616528 TGTAATGGATCTATGTTCCAGATCA 57.383 36.000 12.88 2.23 46.84 2.92
5900 13871 8.211030 TGTAATGGATCTATGTTCCAGATCAT 57.789 34.615 12.88 4.05 46.84 2.45
5902 13873 9.512588 GTAATGGATCTATGTTCCAGATCATTT 57.487 33.333 12.88 8.58 46.84 2.32
5903 13874 7.997773 ATGGATCTATGTTCCAGATCATTTG 57.002 36.000 12.88 0.00 46.84 2.32
5904 13875 6.903516 TGGATCTATGTTCCAGATCATTTGT 58.096 36.000 12.88 0.00 46.84 2.83
5905 13876 8.033178 TGGATCTATGTTCCAGATCATTTGTA 57.967 34.615 12.88 0.00 46.84 2.41
5906 13877 7.933577 TGGATCTATGTTCCAGATCATTTGTAC 59.066 37.037 12.88 0.00 46.84 2.90
5908 13879 7.194112 TCTATGTTCCAGATCATTTGTACCA 57.806 36.000 0.00 0.00 0.00 3.25
5909 13880 7.629157 TCTATGTTCCAGATCATTTGTACCAA 58.371 34.615 0.00 0.00 0.00 3.67
5910 13881 5.957842 TGTTCCAGATCATTTGTACCAAC 57.042 39.130 0.00 0.00 0.00 3.77
5912 13883 4.927267 TCCAGATCATTTGTACCAACCT 57.073 40.909 0.00 0.00 0.00 3.50
5913 13884 6.177610 GTTCCAGATCATTTGTACCAACCTA 58.822 40.000 0.00 0.00 0.00 3.08
5914 13885 6.575244 TCCAGATCATTTGTACCAACCTAT 57.425 37.500 0.00 0.00 0.00 2.57
5916 13887 7.506114 TCCAGATCATTTGTACCAACCTATAC 58.494 38.462 0.00 0.00 0.00 1.47
5917 13888 6.710744 CCAGATCATTTGTACCAACCTATACC 59.289 42.308 0.00 0.00 0.00 2.73
5918 13889 6.710744 CAGATCATTTGTACCAACCTATACCC 59.289 42.308 0.00 0.00 0.00 3.69
5920 13891 4.789159 TCATTTGTACCAACCTATACCCCA 59.211 41.667 0.00 0.00 0.00 4.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 4.680237 TCGTGCAGGCCCTCGTTG 62.680 66.667 0.00 0.00 0.00 4.10
7 8 4.681978 GTCGTGCAGGCCCTCGTT 62.682 66.667 0.00 0.00 0.00 3.85
9 10 4.457496 ATGTCGTGCAGGCCCTCG 62.457 66.667 0.00 0.00 0.00 4.63
10 11 2.512515 GATGTCGTGCAGGCCCTC 60.513 66.667 0.00 0.00 0.00 4.30
11 12 3.005539 AGATGTCGTGCAGGCCCT 61.006 61.111 0.00 0.00 0.00 5.19
12 13 2.821366 CAGATGTCGTGCAGGCCC 60.821 66.667 0.00 0.00 0.00 5.80
13 14 3.503363 GCAGATGTCGTGCAGGCC 61.503 66.667 0.35 0.00 40.86 5.19
14 15 3.503363 GGCAGATGTCGTGCAGGC 61.503 66.667 0.35 0.00 43.12 4.85
15 16 2.046988 TGGCAGATGTCGTGCAGG 60.047 61.111 0.00 0.00 43.12 4.85
16 17 2.733671 CGTGGCAGATGTCGTGCAG 61.734 63.158 0.00 0.00 43.12 4.41
17 18 2.738139 CGTGGCAGATGTCGTGCA 60.738 61.111 0.00 0.00 43.12 4.57
18 19 3.490759 CCGTGGCAGATGTCGTGC 61.491 66.667 0.00 0.00 40.42 5.34
19 20 2.048222 ACCGTGGCAGATGTCGTG 60.048 61.111 0.00 0.00 0.00 4.35
20 21 2.214181 GAGACCGTGGCAGATGTCGT 62.214 60.000 0.00 0.00 33.04 4.34
21 22 1.517257 GAGACCGTGGCAGATGTCG 60.517 63.158 0.00 0.00 33.04 4.35
22 23 1.153549 GGAGACCGTGGCAGATGTC 60.154 63.158 0.00 0.00 0.00 3.06
23 24 2.982130 GGAGACCGTGGCAGATGT 59.018 61.111 0.00 0.00 0.00 3.06
24 25 2.202797 CGGAGACCGTGGCAGATG 60.203 66.667 1.80 0.00 42.73 2.90
42 43 2.835431 ATCTGGAGAGGACGGGCG 60.835 66.667 0.00 0.00 0.00 6.13
43 44 1.456705 AGATCTGGAGAGGACGGGC 60.457 63.158 0.00 0.00 0.00 6.13
44 45 0.825840 GGAGATCTGGAGAGGACGGG 60.826 65.000 0.00 0.00 0.00 5.28
45 46 1.169661 CGGAGATCTGGAGAGGACGG 61.170 65.000 0.00 0.00 0.00 4.79
46 47 0.464735 ACGGAGATCTGGAGAGGACG 60.465 60.000 0.00 0.00 0.00 4.79
47 48 1.314730 GACGGAGATCTGGAGAGGAC 58.685 60.000 0.00 0.00 0.00 3.85
48 49 0.183971 GGACGGAGATCTGGAGAGGA 59.816 60.000 0.00 0.00 0.00 3.71
49 50 1.169661 CGGACGGAGATCTGGAGAGG 61.170 65.000 0.00 0.00 0.00 3.69
50 51 1.791103 GCGGACGGAGATCTGGAGAG 61.791 65.000 0.00 0.00 0.00 3.20
51 52 1.824329 GCGGACGGAGATCTGGAGA 60.824 63.158 0.00 0.00 0.00 3.71
52 53 2.725008 GCGGACGGAGATCTGGAG 59.275 66.667 0.00 0.00 0.00 3.86
53 54 3.209812 CGCGGACGGAGATCTGGA 61.210 66.667 0.00 0.00 34.97 3.86
54 55 3.209812 TCGCGGACGGAGATCTGG 61.210 66.667 6.13 0.00 40.63 3.86
55 56 2.024871 GTCGCGGACGGAGATCTG 59.975 66.667 6.13 0.00 40.63 2.90
78 79 2.670934 AGCAAGGCTGTGGCGAAG 60.671 61.111 0.00 0.00 37.57 3.79
79 80 2.669569 GAGCAAGGCTGTGGCGAA 60.670 61.111 0.00 0.00 39.88 4.70
80 81 4.704833 GGAGCAAGGCTGTGGCGA 62.705 66.667 0.00 0.00 39.88 5.54
82 83 2.362120 ATGGAGCAAGGCTGTGGC 60.362 61.111 0.00 0.00 39.88 5.01
83 84 1.751927 GGATGGAGCAAGGCTGTGG 60.752 63.158 0.00 0.00 39.88 4.17
84 85 2.110967 CGGATGGAGCAAGGCTGTG 61.111 63.158 0.00 0.00 39.88 3.66
85 86 2.249413 CTCGGATGGAGCAAGGCTGT 62.249 60.000 0.00 0.00 39.88 4.40
86 87 1.523258 CTCGGATGGAGCAAGGCTG 60.523 63.158 0.00 0.00 39.88 4.85
87 88 2.906458 CTCGGATGGAGCAAGGCT 59.094 61.111 0.00 0.00 43.88 4.58
94 95 1.227497 GCTTCTGGCTCGGATGGAG 60.227 63.158 0.00 0.00 46.06 3.86
95 96 1.552799 TTGCTTCTGGCTCGGATGGA 61.553 55.000 0.00 0.00 42.39 3.41
96 97 1.078214 TTGCTTCTGGCTCGGATGG 60.078 57.895 0.00 0.00 42.39 3.51
97 98 1.712977 GCTTGCTTCTGGCTCGGATG 61.713 60.000 0.00 0.00 42.39 3.51
98 99 1.451028 GCTTGCTTCTGGCTCGGAT 60.451 57.895 0.00 0.00 42.39 4.18
99 100 2.046892 GCTTGCTTCTGGCTCGGA 60.047 61.111 0.00 0.00 42.39 4.55
100 101 2.359107 TGCTTGCTTCTGGCTCGG 60.359 61.111 0.00 0.00 42.39 4.63
101 102 2.396955 CCTGCTTGCTTCTGGCTCG 61.397 63.158 0.00 0.00 42.39 5.03
102 103 1.002868 TCCTGCTTGCTTCTGGCTC 60.003 57.895 0.00 0.00 42.39 4.70
103 104 1.002379 CTCCTGCTTGCTTCTGGCT 60.002 57.895 0.00 0.00 42.39 4.75
104 105 2.045131 CCTCCTGCTTGCTTCTGGC 61.045 63.158 0.00 0.00 42.22 4.85
105 106 0.392729 CTCCTCCTGCTTGCTTCTGG 60.393 60.000 0.00 0.00 0.00 3.86
106 107 0.612229 TCTCCTCCTGCTTGCTTCTG 59.388 55.000 0.00 0.00 0.00 3.02
107 108 0.903942 CTCTCCTCCTGCTTGCTTCT 59.096 55.000 0.00 0.00 0.00 2.85
108 109 0.901124 TCTCTCCTCCTGCTTGCTTC 59.099 55.000 0.00 0.00 0.00 3.86
109 110 0.903942 CTCTCTCCTCCTGCTTGCTT 59.096 55.000 0.00 0.00 0.00 3.91
110 111 0.977108 CCTCTCTCCTCCTGCTTGCT 60.977 60.000 0.00 0.00 0.00 3.91
111 112 1.521616 CCTCTCTCCTCCTGCTTGC 59.478 63.158 0.00 0.00 0.00 4.01
112 113 0.325110 TCCCTCTCTCCTCCTGCTTG 60.325 60.000 0.00 0.00 0.00 4.01
113 114 0.032217 CTCCCTCTCTCCTCCTGCTT 60.032 60.000 0.00 0.00 0.00 3.91
114 115 1.620259 CTCCCTCTCTCCTCCTGCT 59.380 63.158 0.00 0.00 0.00 4.24
115 116 1.457455 CCTCCCTCTCTCCTCCTGC 60.457 68.421 0.00 0.00 0.00 4.85
116 117 1.457455 GCCTCCCTCTCTCCTCCTG 60.457 68.421 0.00 0.00 0.00 3.86
117 118 3.024217 GCCTCCCTCTCTCCTCCT 58.976 66.667 0.00 0.00 0.00 3.69
118 119 2.520741 CGCCTCCCTCTCTCCTCC 60.521 72.222 0.00 0.00 0.00 4.30
119 120 2.520741 CCGCCTCCCTCTCTCCTC 60.521 72.222 0.00 0.00 0.00 3.71
120 121 3.351885 ACCGCCTCCCTCTCTCCT 61.352 66.667 0.00 0.00 0.00 3.69
121 122 3.151022 CACCGCCTCCCTCTCTCC 61.151 72.222 0.00 0.00 0.00 3.71
122 123 3.151022 CCACCGCCTCCCTCTCTC 61.151 72.222 0.00 0.00 0.00 3.20
123 124 3.999285 ACCACCGCCTCCCTCTCT 61.999 66.667 0.00 0.00 0.00 3.10
124 125 3.775654 CACCACCGCCTCCCTCTC 61.776 72.222 0.00 0.00 0.00 3.20
129 130 4.394712 CTCACCACCACCGCCTCC 62.395 72.222 0.00 0.00 0.00 4.30
135 136 4.314440 TGCTCGCTCACCACCACC 62.314 66.667 0.00 0.00 0.00 4.61
136 137 2.740055 CTGCTCGCTCACCACCAC 60.740 66.667 0.00 0.00 0.00 4.16
137 138 4.007644 CCTGCTCGCTCACCACCA 62.008 66.667 0.00 0.00 0.00 4.17
138 139 4.008933 ACCTGCTCGCTCACCACC 62.009 66.667 0.00 0.00 0.00 4.61
139 140 2.740055 CACCTGCTCGCTCACCAC 60.740 66.667 0.00 0.00 0.00 4.16
140 141 4.007644 CCACCTGCTCGCTCACCA 62.008 66.667 0.00 0.00 0.00 4.17
141 142 4.767255 CCCACCTGCTCGCTCACC 62.767 72.222 0.00 0.00 0.00 4.02
142 143 4.767255 CCCCACCTGCTCGCTCAC 62.767 72.222 0.00 0.00 0.00 3.51
144 145 4.767255 CACCCCACCTGCTCGCTC 62.767 72.222 0.00 0.00 0.00 5.03
152 153 4.986774 TAACCGGCCACCCCACCT 62.987 66.667 0.00 0.00 0.00 4.00
153 154 4.419921 CTAACCGGCCACCCCACC 62.420 72.222 0.00 0.00 0.00 4.61
154 155 4.419921 CCTAACCGGCCACCCCAC 62.420 72.222 0.00 0.00 0.00 4.61
157 158 3.793888 CTCCCTAACCGGCCACCC 61.794 72.222 0.00 0.00 0.00 4.61
158 159 2.686106 TCTCCCTAACCGGCCACC 60.686 66.667 0.00 0.00 0.00 4.61
159 160 2.582978 GTCTCCCTAACCGGCCAC 59.417 66.667 0.00 0.00 0.00 5.01
160 161 2.866523 ATCGTCTCCCTAACCGGCCA 62.867 60.000 0.00 0.00 0.00 5.36
161 162 2.132352 ATCGTCTCCCTAACCGGCC 61.132 63.158 0.00 0.00 0.00 6.13
162 163 1.067582 CATCGTCTCCCTAACCGGC 59.932 63.158 0.00 0.00 0.00 6.13
163 164 0.669077 CTCATCGTCTCCCTAACCGG 59.331 60.000 0.00 0.00 0.00 5.28
164 165 0.669077 CCTCATCGTCTCCCTAACCG 59.331 60.000 0.00 0.00 0.00 4.44
165 166 0.389757 GCCTCATCGTCTCCCTAACC 59.610 60.000 0.00 0.00 0.00 2.85
166 167 1.067821 CTGCCTCATCGTCTCCCTAAC 59.932 57.143 0.00 0.00 0.00 2.34
167 168 1.063942 TCTGCCTCATCGTCTCCCTAA 60.064 52.381 0.00 0.00 0.00 2.69
168 169 0.551396 TCTGCCTCATCGTCTCCCTA 59.449 55.000 0.00 0.00 0.00 3.53
169 170 0.754957 CTCTGCCTCATCGTCTCCCT 60.755 60.000 0.00 0.00 0.00 4.20
170 171 1.739049 CTCTGCCTCATCGTCTCCC 59.261 63.158 0.00 0.00 0.00 4.30
171 172 0.753479 TCCTCTGCCTCATCGTCTCC 60.753 60.000 0.00 0.00 0.00 3.71
172 173 0.667993 CTCCTCTGCCTCATCGTCTC 59.332 60.000 0.00 0.00 0.00 3.36
173 174 0.257328 TCTCCTCTGCCTCATCGTCT 59.743 55.000 0.00 0.00 0.00 4.18
174 175 0.667993 CTCTCCTCTGCCTCATCGTC 59.332 60.000 0.00 0.00 0.00 4.20
175 176 0.257328 TCTCTCCTCTGCCTCATCGT 59.743 55.000 0.00 0.00 0.00 3.73
176 177 0.953727 CTCTCTCCTCTGCCTCATCG 59.046 60.000 0.00 0.00 0.00 3.84
177 178 1.133513 TCCTCTCTCCTCTGCCTCATC 60.134 57.143 0.00 0.00 0.00 2.92
178 179 0.932955 TCCTCTCTCCTCTGCCTCAT 59.067 55.000 0.00 0.00 0.00 2.90
179 180 0.258484 CTCCTCTCTCCTCTGCCTCA 59.742 60.000 0.00 0.00 0.00 3.86
180 181 0.468029 CCTCCTCTCTCCTCTGCCTC 60.468 65.000 0.00 0.00 0.00 4.70
181 182 1.620259 CCTCCTCTCTCCTCTGCCT 59.380 63.158 0.00 0.00 0.00 4.75
182 183 1.457455 CCCTCCTCTCTCCTCTGCC 60.457 68.421 0.00 0.00 0.00 4.85
183 184 0.468029 CTCCCTCCTCTCTCCTCTGC 60.468 65.000 0.00 0.00 0.00 4.26
184 185 1.143684 CTCTCCCTCCTCTCTCCTCTG 59.856 61.905 0.00 0.00 0.00 3.35
185 186 1.522900 CTCTCCCTCCTCTCTCCTCT 58.477 60.000 0.00 0.00 0.00 3.69
186 187 0.478507 CCTCTCCCTCCTCTCTCCTC 59.521 65.000 0.00 0.00 0.00 3.71
187 188 0.998945 CCCTCTCCCTCCTCTCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
188 189 0.996762 TCCCTCTCCCTCCTCTCTCC 60.997 65.000 0.00 0.00 0.00 3.71
189 190 0.478507 CTCCCTCTCCCTCCTCTCTC 59.521 65.000 0.00 0.00 0.00 3.20
190 191 0.998945 CCTCCCTCTCCCTCCTCTCT 60.999 65.000 0.00 0.00 0.00 3.10
191 192 1.541672 CCTCCCTCTCCCTCCTCTC 59.458 68.421 0.00 0.00 0.00 3.20
192 193 2.710826 GCCTCCCTCTCCCTCCTCT 61.711 68.421 0.00 0.00 0.00 3.69
193 194 2.123033 GCCTCCCTCTCCCTCCTC 60.123 72.222 0.00 0.00 0.00 3.71
194 195 4.150454 CGCCTCCCTCTCCCTCCT 62.150 72.222 0.00 0.00 0.00 3.69
195 196 2.956077 AATCGCCTCCCTCTCCCTCC 62.956 65.000 0.00 0.00 0.00 4.30
196 197 1.051556 AAATCGCCTCCCTCTCCCTC 61.052 60.000 0.00 0.00 0.00 4.30
197 198 1.003573 AAATCGCCTCCCTCTCCCT 59.996 57.895 0.00 0.00 0.00 4.20
198 199 1.147153 CAAATCGCCTCCCTCTCCC 59.853 63.158 0.00 0.00 0.00 4.30
199 200 1.147153 CCAAATCGCCTCCCTCTCC 59.853 63.158 0.00 0.00 0.00 3.71
200 201 1.147153 CCCAAATCGCCTCCCTCTC 59.853 63.158 0.00 0.00 0.00 3.20
201 202 2.378634 CCCCAAATCGCCTCCCTCT 61.379 63.158 0.00 0.00 0.00 3.69
202 203 2.193248 CCCCAAATCGCCTCCCTC 59.807 66.667 0.00 0.00 0.00 4.30
203 204 3.420482 CCCCCAAATCGCCTCCCT 61.420 66.667 0.00 0.00 0.00 4.20
204 205 2.508407 TTTCCCCCAAATCGCCTCCC 62.508 60.000 0.00 0.00 0.00 4.30
205 206 0.397114 ATTTCCCCCAAATCGCCTCC 60.397 55.000 0.00 0.00 27.18 4.30
206 207 0.746659 CATTTCCCCCAAATCGCCTC 59.253 55.000 0.00 0.00 31.79 4.70
207 208 0.687427 CCATTTCCCCCAAATCGCCT 60.687 55.000 0.00 0.00 31.79 5.52
208 209 1.685355 CCCATTTCCCCCAAATCGCC 61.685 60.000 0.00 0.00 31.79 5.54
209 210 1.685355 CCCCATTTCCCCCAAATCGC 61.685 60.000 0.00 0.00 31.79 4.58
210 211 0.325203 ACCCCATTTCCCCCAAATCG 60.325 55.000 0.00 0.00 31.79 3.34
211 212 1.203237 CACCCCATTTCCCCCAAATC 58.797 55.000 0.00 0.00 31.79 2.17
212 213 0.253113 CCACCCCATTTCCCCCAAAT 60.253 55.000 0.00 0.00 34.79 2.32
213 214 1.159664 CCACCCCATTTCCCCCAAA 59.840 57.895 0.00 0.00 0.00 3.28
214 215 2.865600 CCACCCCATTTCCCCCAA 59.134 61.111 0.00 0.00 0.00 4.12
215 216 3.280151 CCCACCCCATTTCCCCCA 61.280 66.667 0.00 0.00 0.00 4.96
216 217 4.796775 GCCCACCCCATTTCCCCC 62.797 72.222 0.00 0.00 0.00 5.40
218 219 3.373932 ATCGCCCACCCCATTTCCC 62.374 63.158 0.00 0.00 0.00 3.97
219 220 2.127232 CATCGCCCACCCCATTTCC 61.127 63.158 0.00 0.00 0.00 3.13
220 221 2.785425 GCATCGCCCACCCCATTTC 61.785 63.158 0.00 0.00 0.00 2.17
221 222 2.759560 GCATCGCCCACCCCATTT 60.760 61.111 0.00 0.00 0.00 2.32
244 245 4.097361 GAGGAGGGGAACGGGCAC 62.097 72.222 0.00 0.00 0.00 5.01
245 246 4.332543 AGAGGAGGGGAACGGGCA 62.333 66.667 0.00 0.00 0.00 5.36
246 247 3.787001 CAGAGGAGGGGAACGGGC 61.787 72.222 0.00 0.00 0.00 6.13
247 248 0.105658 TATCAGAGGAGGGGAACGGG 60.106 60.000 0.00 0.00 0.00 5.28
248 249 1.041437 GTATCAGAGGAGGGGAACGG 58.959 60.000 0.00 0.00 0.00 4.44
249 250 2.074729 AGTATCAGAGGAGGGGAACG 57.925 55.000 0.00 0.00 0.00 3.95
250 251 3.502356 CCTAGTATCAGAGGAGGGGAAC 58.498 54.545 0.00 0.00 34.46 3.62
251 252 2.451273 CCCTAGTATCAGAGGAGGGGAA 59.549 54.545 0.00 0.00 42.85 3.97
252 253 2.074579 CCCTAGTATCAGAGGAGGGGA 58.925 57.143 0.00 0.00 42.85 4.81
253 254 1.551329 GCCCTAGTATCAGAGGAGGGG 60.551 61.905 7.37 0.00 46.11 4.79
255 256 1.431243 AGGCCCTAGTATCAGAGGAGG 59.569 57.143 0.00 0.00 34.46 4.30
256 257 2.990740 AGGCCCTAGTATCAGAGGAG 57.009 55.000 0.00 0.00 34.46 3.69
257 258 3.708236 AAAGGCCCTAGTATCAGAGGA 57.292 47.619 0.00 0.00 34.46 3.71
258 259 4.779993 AAAAAGGCCCTAGTATCAGAGG 57.220 45.455 0.00 0.00 0.00 3.69
282 283 3.694734 CACATGTGCGTGGATATTTTCC 58.305 45.455 13.94 0.00 45.69 3.13
319 320 4.646877 TGGCGGTTCCGTTTCCCC 62.647 66.667 12.81 5.63 37.80 4.81
320 321 3.053896 CTGGCGGTTCCGTTTCCC 61.054 66.667 12.81 5.97 37.80 3.97
321 322 3.733960 GCTGGCGGTTCCGTTTCC 61.734 66.667 12.81 6.31 37.80 3.13
322 323 0.952010 TAAGCTGGCGGTTCCGTTTC 60.952 55.000 12.81 4.22 37.80 2.78
323 324 0.322187 ATAAGCTGGCGGTTCCGTTT 60.322 50.000 12.81 3.54 37.80 3.60
324 325 0.538118 TATAAGCTGGCGGTTCCGTT 59.462 50.000 12.81 1.71 37.80 4.44
325 326 0.538118 TTATAAGCTGGCGGTTCCGT 59.462 50.000 12.81 0.00 37.80 4.69
326 327 1.878953 ATTATAAGCTGGCGGTTCCG 58.121 50.000 6.90 6.90 37.80 4.30
327 328 3.497262 GTGTATTATAAGCTGGCGGTTCC 59.503 47.826 0.00 0.00 32.30 3.62
328 329 3.183775 CGTGTATTATAAGCTGGCGGTTC 59.816 47.826 0.00 0.00 32.30 3.62
329 330 3.128349 CGTGTATTATAAGCTGGCGGTT 58.872 45.455 0.00 0.00 34.74 4.44
330 331 2.101917 ACGTGTATTATAAGCTGGCGGT 59.898 45.455 0.00 0.00 0.00 5.68
331 332 2.750948 ACGTGTATTATAAGCTGGCGG 58.249 47.619 0.00 0.00 0.00 6.13
332 333 4.147653 GTGTACGTGTATTATAAGCTGGCG 59.852 45.833 0.00 0.00 0.00 5.69
333 334 4.147653 CGTGTACGTGTATTATAAGCTGGC 59.852 45.833 0.00 0.00 34.11 4.85
334 335 5.801176 CGTGTACGTGTATTATAAGCTGG 57.199 43.478 0.00 0.00 34.11 4.85
363 364 1.536709 CCGGCCCGTGTACTATTGTAC 60.537 57.143 10.11 10.11 46.74 2.90
364 365 0.746063 CCGGCCCGTGTACTATTGTA 59.254 55.000 0.85 0.00 0.00 2.41
365 366 1.259840 ACCGGCCCGTGTACTATTGT 61.260 55.000 0.00 0.00 0.00 2.71
366 367 0.808453 CACCGGCCCGTGTACTATTG 60.808 60.000 15.28 0.00 0.00 1.90
367 368 1.518774 CACCGGCCCGTGTACTATT 59.481 57.895 15.28 0.00 0.00 1.73
368 369 3.085119 GCACCGGCCCGTGTACTAT 62.085 63.158 22.73 0.00 36.08 2.12
369 370 3.762247 GCACCGGCCCGTGTACTA 61.762 66.667 22.73 0.00 36.08 1.82
380 381 3.989698 CTGTACGAGCCTGCACCGG 62.990 68.421 0.00 0.00 0.00 5.28
381 382 2.507102 CTGTACGAGCCTGCACCG 60.507 66.667 0.00 0.00 0.00 4.94
382 383 2.125512 CCTGTACGAGCCTGCACC 60.126 66.667 0.00 0.00 0.00 5.01
383 384 2.125512 CCCTGTACGAGCCTGCAC 60.126 66.667 0.00 0.00 0.00 4.57
384 385 4.082523 GCCCTGTACGAGCCTGCA 62.083 66.667 0.00 0.00 0.00 4.41
385 386 3.724914 GAGCCCTGTACGAGCCTGC 62.725 68.421 0.00 0.00 0.00 4.85
386 387 0.752009 TAGAGCCCTGTACGAGCCTG 60.752 60.000 0.00 0.00 0.00 4.85
387 388 0.752376 GTAGAGCCCTGTACGAGCCT 60.752 60.000 0.00 0.00 0.00 4.58
388 389 1.734748 GTAGAGCCCTGTACGAGCC 59.265 63.158 0.00 0.00 0.00 4.70
393 394 0.656785 CGAGTCGTAGAGCCCTGTAC 59.343 60.000 3.82 0.00 36.95 2.90
394 395 0.251354 ACGAGTCGTAGAGCCCTGTA 59.749 55.000 18.34 0.00 38.73 2.74
395 396 1.002379 ACGAGTCGTAGAGCCCTGT 60.002 57.895 18.34 0.00 38.73 4.00
396 397 0.745128 AGACGAGTCGTAGAGCCCTG 60.745 60.000 19.93 0.00 41.37 4.45
397 398 0.829333 TAGACGAGTCGTAGAGCCCT 59.171 55.000 19.93 12.58 41.37 5.19
398 399 0.936600 GTAGACGAGTCGTAGAGCCC 59.063 60.000 19.93 4.82 41.37 5.19
399 400 0.576328 CGTAGACGAGTCGTAGAGCC 59.424 60.000 19.93 5.62 41.37 4.70
400 401 0.043138 GCGTAGACGAGTCGTAGAGC 60.043 60.000 19.93 17.19 41.37 4.09
401 402 0.226734 CGCGTAGACGAGTCGTAGAG 59.773 60.000 19.93 11.42 41.37 2.43
402 403 1.746727 GCGCGTAGACGAGTCGTAGA 61.747 60.000 19.93 6.52 41.37 2.59
403 404 1.366262 GCGCGTAGACGAGTCGTAG 60.366 63.158 19.93 11.42 41.37 3.51
404 405 2.697425 GCGCGTAGACGAGTCGTA 59.303 61.111 19.93 0.00 41.37 3.43
405 406 4.495939 CGCGCGTAGACGAGTCGT 62.496 66.667 24.19 20.02 45.10 4.34
407 408 4.517703 AGCGCGCGTAGACGAGTC 62.518 66.667 32.35 11.09 43.02 3.36
408 409 4.517703 GAGCGCGCGTAGACGAGT 62.518 66.667 32.35 3.96 43.02 4.18
409 410 2.868173 TAGAGCGCGCGTAGACGAG 61.868 63.158 32.35 3.53 43.02 4.18
410 411 2.887086 TAGAGCGCGCGTAGACGA 60.887 61.111 32.35 13.23 43.02 4.20
411 412 2.717898 GTAGAGCGCGCGTAGACG 60.718 66.667 32.35 3.26 43.27 4.18
412 413 2.717898 CGTAGAGCGCGCGTAGAC 60.718 66.667 32.35 21.48 0.00 2.59
423 424 1.207089 TCATTTCAGGTGGGCGTAGAG 59.793 52.381 0.00 0.00 0.00 2.43
424 425 1.066430 GTCATTTCAGGTGGGCGTAGA 60.066 52.381 0.00 0.00 0.00 2.59
425 426 1.369625 GTCATTTCAGGTGGGCGTAG 58.630 55.000 0.00 0.00 0.00 3.51
426 427 0.035820 GGTCATTTCAGGTGGGCGTA 60.036 55.000 0.00 0.00 0.00 4.42
427 428 1.303317 GGTCATTTCAGGTGGGCGT 60.303 57.895 0.00 0.00 0.00 5.68
428 429 0.680921 ATGGTCATTTCAGGTGGGCG 60.681 55.000 0.00 0.00 0.00 6.13
429 430 1.106285 GATGGTCATTTCAGGTGGGC 58.894 55.000 0.00 0.00 0.00 5.36
430 431 1.340017 ACGATGGTCATTTCAGGTGGG 60.340 52.381 0.00 0.00 0.00 4.61
431 432 2.113860 ACGATGGTCATTTCAGGTGG 57.886 50.000 0.00 0.00 0.00 4.61
432 433 2.936498 GGTACGATGGTCATTTCAGGTG 59.064 50.000 0.00 0.00 0.00 4.00
433 434 2.093128 GGGTACGATGGTCATTTCAGGT 60.093 50.000 0.00 0.00 0.00 4.00
434 435 2.561569 GGGTACGATGGTCATTTCAGG 58.438 52.381 0.00 0.00 0.00 3.86
435 436 2.170607 AGGGGTACGATGGTCATTTCAG 59.829 50.000 0.00 0.00 0.00 3.02
436 437 2.169769 GAGGGGTACGATGGTCATTTCA 59.830 50.000 0.00 0.00 0.00 2.69
437 438 2.802057 CGAGGGGTACGATGGTCATTTC 60.802 54.545 0.00 0.00 0.00 2.17
438 439 1.138266 CGAGGGGTACGATGGTCATTT 59.862 52.381 0.00 0.00 0.00 2.32
439 440 0.750850 CGAGGGGTACGATGGTCATT 59.249 55.000 0.00 0.00 0.00 2.57
440 441 0.396695 ACGAGGGGTACGATGGTCAT 60.397 55.000 0.00 0.00 34.70 3.06
441 442 0.612732 AACGAGGGGTACGATGGTCA 60.613 55.000 0.00 0.00 34.70 4.02
442 443 1.066152 GTAACGAGGGGTACGATGGTC 59.934 57.143 0.00 0.00 34.70 4.02
443 444 1.106285 GTAACGAGGGGTACGATGGT 58.894 55.000 0.00 0.00 34.70 3.55
444 445 0.029834 CGTAACGAGGGGTACGATGG 59.970 60.000 5.83 0.00 38.08 3.51
445 446 1.016627 TCGTAACGAGGGGTACGATG 58.983 55.000 10.03 0.00 39.59 3.84
446 447 1.401905 GTTCGTAACGAGGGGTACGAT 59.598 52.381 14.22 0.00 43.17 3.73
447 448 0.802494 GTTCGTAACGAGGGGTACGA 59.198 55.000 10.03 10.03 42.22 3.43
448 449 0.179163 GGTTCGTAACGAGGGGTACG 60.179 60.000 5.40 5.40 37.14 3.67
449 450 0.179163 CGGTTCGTAACGAGGGGTAC 60.179 60.000 0.00 0.00 37.14 3.34
450 451 0.608035 ACGGTTCGTAACGAGGGGTA 60.608 55.000 6.46 0.00 38.73 3.69
451 452 1.866853 GACGGTTCGTAACGAGGGGT 61.867 60.000 6.46 0.00 41.37 4.95
452 453 1.153958 GACGGTTCGTAACGAGGGG 60.154 63.158 6.46 0.00 41.37 4.79
453 454 0.171903 ATGACGGTTCGTAACGAGGG 59.828 55.000 6.46 0.00 41.37 4.30
454 455 1.542544 GATGACGGTTCGTAACGAGG 58.457 55.000 6.46 0.00 41.37 4.63
455 456 1.177668 CGATGACGGTTCGTAACGAG 58.822 55.000 6.46 0.00 41.37 4.18
456 457 0.795698 TCGATGACGGTTCGTAACGA 59.204 50.000 6.46 0.00 41.37 3.85
457 458 0.903187 GTCGATGACGGTTCGTAACG 59.097 55.000 0.00 0.00 41.37 3.18
468 469 0.872021 GGTCCAGATGCGTCGATGAC 60.872 60.000 9.31 13.73 0.00 3.06
469 470 1.437573 GGTCCAGATGCGTCGATGA 59.562 57.895 9.31 0.00 0.00 2.92
470 471 1.946156 CGGTCCAGATGCGTCGATG 60.946 63.158 0.00 0.00 0.00 3.84
471 472 2.337749 GACGGTCCAGATGCGTCGAT 62.338 60.000 0.00 0.00 0.00 3.59
472 473 3.047718 GACGGTCCAGATGCGTCGA 62.048 63.158 0.00 0.00 0.00 4.20
473 474 2.579787 GACGGTCCAGATGCGTCG 60.580 66.667 0.00 0.00 0.00 5.12
474 475 2.202756 GGACGGTCCAGATGCGTC 60.203 66.667 22.10 0.00 36.28 5.19
475 476 2.227089 GAAGGACGGTCCAGATGCGT 62.227 60.000 27.87 3.42 39.61 5.24
476 477 1.519455 GAAGGACGGTCCAGATGCG 60.519 63.158 27.87 0.00 39.61 4.73
477 478 1.519455 CGAAGGACGGTCCAGATGC 60.519 63.158 27.87 6.39 39.61 3.91
478 479 4.814900 CGAAGGACGGTCCAGATG 57.185 61.111 27.87 11.46 39.61 2.90
531 532 6.183360 ACAACAGGTGTAGTAGTAGCAAGAAA 60.183 38.462 0.00 0.00 39.29 2.52
537 538 3.846360 CCACAACAGGTGTAGTAGTAGC 58.154 50.000 0.00 0.00 46.44 3.58
538 539 3.672511 CGCCACAACAGGTGTAGTAGTAG 60.673 52.174 0.00 0.00 46.44 2.57
542 543 0.319083 CCGCCACAACAGGTGTAGTA 59.681 55.000 0.00 0.00 46.44 1.82
543 544 1.070786 CCGCCACAACAGGTGTAGT 59.929 57.895 0.00 0.00 46.44 2.73
544 545 0.670546 CTCCGCCACAACAGGTGTAG 60.671 60.000 0.00 0.00 46.44 2.74
546 547 2.111043 CTCCGCCACAACAGGTGT 59.889 61.111 0.00 0.00 46.44 4.16
549 550 2.738521 CGTCTCCGCCACAACAGG 60.739 66.667 0.00 0.00 0.00 4.00
557 561 3.371063 TCTCACCACGTCTCCGCC 61.371 66.667 0.00 0.00 37.70 6.13
559 563 0.243907 ATTGTCTCACCACGTCTCCG 59.756 55.000 0.00 0.00 40.83 4.63
607 611 1.135774 TCTGACCGTCGATGAGAAACG 60.136 52.381 6.11 0.00 36.22 3.60
608 612 2.631418 TCTGACCGTCGATGAGAAAC 57.369 50.000 6.11 0.00 0.00 2.78
609 613 3.868757 AATCTGACCGTCGATGAGAAA 57.131 42.857 6.11 0.00 0.00 2.52
614 618 3.243877 GTCATCAAATCTGACCGTCGATG 59.756 47.826 0.00 0.00 37.61 3.84
651 655 1.134907 ACCATACAGGCGTACGGAAAG 60.135 52.381 18.39 0.00 43.14 2.62
653 657 0.896923 AACCATACAGGCGTACGGAA 59.103 50.000 18.39 0.00 43.14 4.30
708 736 5.078411 ACCAAGTCACTGTCTTATAGCTG 57.922 43.478 0.00 0.00 0.00 4.24
749 777 1.799575 TCCTATGGGGCCTGGTACTAT 59.200 52.381 0.84 0.00 34.39 2.12
750 778 1.247260 TCCTATGGGGCCTGGTACTA 58.753 55.000 0.84 0.00 34.39 1.82
751 779 0.573279 ATCCTATGGGGCCTGGTACT 59.427 55.000 0.84 0.00 34.39 2.73
752 780 1.351350 GAATCCTATGGGGCCTGGTAC 59.649 57.143 0.84 0.00 34.39 3.34
753 781 1.742308 GAATCCTATGGGGCCTGGTA 58.258 55.000 0.84 0.00 34.39 3.25
754 782 1.068352 GGAATCCTATGGGGCCTGGT 61.068 60.000 0.84 0.00 34.39 4.00
756 784 1.912043 CTAGGAATCCTATGGGGCCTG 59.088 57.143 9.80 0.00 35.36 4.85
757 785 1.203492 CCTAGGAATCCTATGGGGCCT 60.203 57.143 9.80 9.37 35.36 5.19
758 786 1.290134 CCTAGGAATCCTATGGGGCC 58.710 60.000 9.80 0.00 35.36 5.80
765 793 0.832135 CCAGCCGCCTAGGAATCCTA 60.832 60.000 14.75 8.95 45.00 2.94
787 815 0.036732 TGCGAGGAAGGAAATGCAGT 59.963 50.000 0.00 0.00 0.00 4.40
827 855 3.356145 GCAGCAGCAATGTTTGTTTTTG 58.644 40.909 0.00 0.00 41.58 2.44
841 869 1.211969 CACTGATTGGTGCAGCAGC 59.788 57.895 19.25 18.07 42.57 5.25
848 913 2.334946 CGGGGTGCACTGATTGGTG 61.335 63.158 17.98 0.00 39.91 4.17
883 948 1.265568 ATTGTTGCGTCGCTAGTACG 58.734 50.000 19.50 13.40 43.12 3.67
885 950 4.505191 GGATTTATTGTTGCGTCGCTAGTA 59.495 41.667 19.50 1.94 0.00 1.82
886 951 3.308866 GGATTTATTGTTGCGTCGCTAGT 59.691 43.478 19.50 4.55 0.00 2.57
887 952 3.308595 TGGATTTATTGTTGCGTCGCTAG 59.691 43.478 19.50 0.00 0.00 3.42
938 1096 2.302260 TGTGAAAATGCTGTTCGGGAA 58.698 42.857 0.00 0.00 0.00 3.97
939 1097 1.974265 TGTGAAAATGCTGTTCGGGA 58.026 45.000 0.00 0.00 0.00 5.14
940 1098 2.228582 TGATGTGAAAATGCTGTTCGGG 59.771 45.455 0.00 0.00 0.00 5.14
941 1099 3.557577 TGATGTGAAAATGCTGTTCGG 57.442 42.857 0.00 0.00 0.00 4.30
942 1100 4.556135 GTGATGATGTGAAAATGCTGTTCG 59.444 41.667 0.00 0.00 0.00 3.95
962 1120 0.733150 CTAGCGACGATGGAGTGTGA 59.267 55.000 0.00 0.00 0.00 3.58
963 1121 0.248661 CCTAGCGACGATGGAGTGTG 60.249 60.000 0.00 0.00 0.00 3.82
989 1147 2.514824 GCCTCATCCGCCAAGGTC 60.515 66.667 0.00 0.00 41.99 3.85
1299 2704 0.525668 CCGCCTTCACGTAGCAGTAG 60.526 60.000 0.00 0.00 0.00 2.57
1365 2770 1.338973 ACATGTCTCACGTACGTGGTT 59.661 47.619 39.32 21.24 45.43 3.67
1368 2773 2.657184 TGAACATGTCTCACGTACGTG 58.343 47.619 36.46 36.46 46.64 4.49
1394 2808 4.099419 ACCCAGTACCAAGCAAAAGAAAAG 59.901 41.667 0.00 0.00 0.00 2.27
1410 2824 2.447429 TCCCCACAAATCAAACCCAGTA 59.553 45.455 0.00 0.00 0.00 2.74
1412 2826 2.008242 TCCCCACAAATCAAACCCAG 57.992 50.000 0.00 0.00 0.00 4.45
1413 2827 2.478872 TTCCCCACAAATCAAACCCA 57.521 45.000 0.00 0.00 0.00 4.51
1414 2828 4.071423 CAAATTCCCCACAAATCAAACCC 58.929 43.478 0.00 0.00 0.00 4.11
1420 2834 5.682234 AATCCTCAAATTCCCCACAAATC 57.318 39.130 0.00 0.00 0.00 2.17
1421 2835 5.804120 GCAAATCCTCAAATTCCCCACAAAT 60.804 40.000 0.00 0.00 0.00 2.32
1425 2839 2.093500 GGCAAATCCTCAAATTCCCCAC 60.093 50.000 0.00 0.00 0.00 4.61
1870 3292 3.882288 TGCTGCATACACAGAGAAAAACA 59.118 39.130 0.00 0.00 40.25 2.83
2313 5546 2.280389 CAGCAGCATCGGCCGTAT 60.280 61.111 27.15 14.59 42.56 3.06
2569 5820 1.813862 CGCCCTTTCTTTGACTCCACA 60.814 52.381 0.00 0.00 0.00 4.17
2877 8916 6.055588 TGGAAGTTCACCTTGTAAGAGAAAG 58.944 40.000 5.01 0.00 32.03 2.62
2881 8920 6.884280 AATTGGAAGTTCACCTTGTAAGAG 57.116 37.500 5.01 0.00 32.03 2.85
2882 8921 8.934023 AATAATTGGAAGTTCACCTTGTAAGA 57.066 30.769 5.01 0.00 32.03 2.10
2891 8930 5.324697 GCGACAGAATAATTGGAAGTTCAC 58.675 41.667 5.01 0.00 0.00 3.18
2900 8939 5.977731 TCATTCATCGCGACAGAATAATTG 58.022 37.500 27.81 20.61 31.26 2.32
2902 8941 5.755375 AGTTCATTCATCGCGACAGAATAAT 59.245 36.000 27.81 16.13 31.26 1.28
2905 8944 3.525537 AGTTCATTCATCGCGACAGAAT 58.474 40.909 24.74 24.74 32.53 2.40
2906 8945 2.959516 AGTTCATTCATCGCGACAGAA 58.040 42.857 22.90 22.90 0.00 3.02
2908 8947 2.667969 TGAAGTTCATTCATCGCGACAG 59.332 45.455 12.93 7.65 43.09 3.51
2909 8948 2.682836 TGAAGTTCATTCATCGCGACA 58.317 42.857 12.93 0.00 43.09 4.35
2981 9023 2.096713 CCTCGCTGCGATTATAAACTGC 60.097 50.000 26.15 0.00 34.61 4.40
3220 9265 1.046472 TCCCGCCGTTGAGGATGTAT 61.046 55.000 0.00 0.00 45.00 2.29
3396 9450 0.886563 CTACTGACCTCCCGACGTTT 59.113 55.000 0.00 0.00 0.00 3.60
3400 9454 2.772691 CGGCTACTGACCTCCCGAC 61.773 68.421 0.00 0.00 41.34 4.79
3401 9455 2.439701 CGGCTACTGACCTCCCGA 60.440 66.667 0.00 0.00 41.34 5.14
3403 9457 1.946475 GACACGGCTACTGACCTCCC 61.946 65.000 0.00 0.00 0.00 4.30
3435 9498 1.183549 AGGTGTAGCTCCTGTAACGG 58.816 55.000 0.00 0.00 33.62 4.44
3436 9499 2.607187 CAAGGTGTAGCTCCTGTAACG 58.393 52.381 0.00 0.00 35.27 3.18
3475 9538 4.321750 GGAGAATGGCATTGGATTAGCATG 60.322 45.833 19.07 0.00 0.00 4.06
3482 9545 0.552848 ACCGGAGAATGGCATTGGAT 59.447 50.000 19.07 2.99 0.00 3.41
3540 9610 3.255379 GACGCCGATCAGAACCGC 61.255 66.667 0.00 0.00 0.00 5.68
3600 9670 0.179148 CGCCGCCATAAAAGGAAACC 60.179 55.000 0.00 0.00 0.00 3.27
3620 9690 4.445545 CCTTGCTTTCGCCGTCGC 62.446 66.667 0.00 0.00 35.26 5.19
3623 9693 1.098712 TTTCACCTTGCTTTCGCCGT 61.099 50.000 0.00 0.00 34.43 5.68
3624 9694 0.240945 ATTTCACCTTGCTTTCGCCG 59.759 50.000 0.00 0.00 34.43 6.46
3625 9695 1.402852 GGATTTCACCTTGCTTTCGCC 60.403 52.381 0.00 0.00 34.43 5.54
3637 9721 1.808411 TGCTTCCTCGTGGATTTCAC 58.192 50.000 7.11 0.00 42.81 3.18
3693 9777 1.002069 TCTTCCATGGCCTGGTCAAT 58.998 50.000 4.49 0.00 46.08 2.57
3873 9957 1.558756 CTGCTTGGAGTCCTTGGAGAT 59.441 52.381 11.33 0.00 0.00 2.75
3883 9967 1.151810 TTCCTCCCCTGCTTGGAGT 60.152 57.895 13.38 0.00 46.64 3.85
4045 10129 1.349259 GAGCACGACGTTATTGGCGT 61.349 55.000 0.00 0.00 45.86 5.68
4107 10191 2.106477 TACATTTGCGGTGCTCATGA 57.894 45.000 0.00 0.00 0.00 3.07
4133 10287 3.001736 GCAAAGAAATCGGAATCGGAGAG 59.998 47.826 0.00 0.00 43.63 3.20
4159 10313 8.900781 GCATCACATGGCTAATTATCATCTTAT 58.099 33.333 0.00 0.00 0.00 1.73
4164 10318 5.651139 GGAGCATCACATGGCTAATTATCAT 59.349 40.000 0.00 0.00 41.22 2.45
4174 10331 1.068127 GGAAATGGAGCATCACATGGC 59.932 52.381 0.00 0.00 36.25 4.40
4302 10461 3.064958 CCTTGAACGACGAGTCTAGCATA 59.935 47.826 0.00 0.00 0.00 3.14
4326 10485 1.004918 CCCGAAGTCACCGAGCTTT 60.005 57.895 0.00 0.00 0.00 3.51
4335 10494 3.589654 CTTGGCGAGCCCGAAGTCA 62.590 63.158 12.05 0.00 38.22 3.41
4365 10524 0.684535 TTGTCAGTGATCTTCGGCCA 59.315 50.000 2.24 0.00 0.00 5.36
4461 10620 0.172803 GGACGACACCGAAGCTGTAT 59.827 55.000 0.00 0.00 39.50 2.29
4519 10731 4.888325 ATCCTCCTCCGGCTGGGG 62.888 72.222 12.87 8.55 36.01 4.96
4521 10733 2.444706 TCATCCTCCTCCGGCTGG 60.445 66.667 4.71 4.71 0.00 4.85
4526 10753 4.271816 CCGCGTCATCCTCCTCCG 62.272 72.222 4.92 0.00 0.00 4.63
4536 10763 3.755628 GCTAGGTGGACCGCGTCA 61.756 66.667 4.92 0.00 42.08 4.35
4537 10764 3.412879 GAGCTAGGTGGACCGCGTC 62.413 68.421 4.92 2.44 42.08 5.19
4538 10765 3.450115 GAGCTAGGTGGACCGCGT 61.450 66.667 4.92 5.45 42.08 6.01
4606 10833 1.247567 AACTTTCCACCCAATCGCTG 58.752 50.000 0.00 0.00 0.00 5.18
4621 10848 2.622452 CCATCTCCTGGGCATCAAACTT 60.622 50.000 0.00 0.00 41.82 2.66
4716 10943 1.157870 CCTCTGACCGCAACACGTTT 61.158 55.000 0.00 0.00 41.42 3.60
4738 10965 4.816984 GGGGAGACTCGGGAGCGA 62.817 72.222 0.00 0.00 0.00 4.93
4768 10995 1.199789 CGGCGGCATGTAATATGCAAT 59.800 47.619 10.53 0.00 46.21 3.56
4803 11641 7.326789 CGTTTTGTTGCAGATGAAGATGTAAAT 59.673 33.333 0.00 0.00 0.00 1.40
4858 12108 2.898840 CGCGCTGATGCTCCCATT 60.899 61.111 5.56 0.00 36.97 3.16
5056 12311 0.878523 CGTTGGTGTCAAGCTCCGAA 60.879 55.000 0.00 0.00 32.92 4.30
5228 13112 1.002624 GTTGCCCCGGTCTGATTCA 60.003 57.895 0.00 0.00 0.00 2.57
5796 13767 4.348168 ACATAAATGCCCTACCTACAGGAG 59.652 45.833 1.29 0.00 38.00 3.69
5797 13768 4.102524 CACATAAATGCCCTACCTACAGGA 59.897 45.833 1.29 0.00 38.00 3.86
5798 13769 4.141482 ACACATAAATGCCCTACCTACAGG 60.141 45.833 0.00 0.00 42.17 4.00
5800 13771 5.045505 TGAACACATAAATGCCCTACCTACA 60.046 40.000 0.00 0.00 0.00 2.74
5801 13772 5.433526 TGAACACATAAATGCCCTACCTAC 58.566 41.667 0.00 0.00 0.00 3.18
5802 13773 5.702065 TGAACACATAAATGCCCTACCTA 57.298 39.130 0.00 0.00 0.00 3.08
5803 13774 4.584638 TGAACACATAAATGCCCTACCT 57.415 40.909 0.00 0.00 0.00 3.08
5805 13776 6.862209 TCAATTGAACACATAAATGCCCTAC 58.138 36.000 5.45 0.00 0.00 3.18
5806 13777 7.341512 TCATCAATTGAACACATAAATGCCCTA 59.658 33.333 13.09 0.00 0.00 3.53
5807 13778 5.999205 TCAATTGAACACATAAATGCCCT 57.001 34.783 5.45 0.00 0.00 5.19
5809 13780 7.259882 TCTCATCAATTGAACACATAAATGCC 58.740 34.615 13.09 0.00 32.78 4.40
5810 13781 8.692110 TTCTCATCAATTGAACACATAAATGC 57.308 30.769 13.09 0.00 32.78 3.56
5872 13843 9.512588 GATCTGGAACATAGATCCATTACAATT 57.487 33.333 0.00 0.00 45.57 2.32
5873 13844 8.663167 TGATCTGGAACATAGATCCATTACAAT 58.337 33.333 11.27 0.00 46.35 2.71
5874 13845 8.033178 TGATCTGGAACATAGATCCATTACAA 57.967 34.615 11.27 0.00 46.35 2.41
5875 13846 7.616528 TGATCTGGAACATAGATCCATTACA 57.383 36.000 11.27 0.00 46.35 2.41
5877 13848 9.511272 CAAATGATCTGGAACATAGATCCATTA 57.489 33.333 11.27 0.00 46.35 1.90
5878 13849 8.003044 ACAAATGATCTGGAACATAGATCCATT 58.997 33.333 11.27 8.67 46.35 3.16
5880 13851 6.903516 ACAAATGATCTGGAACATAGATCCA 58.096 36.000 11.27 0.00 46.35 3.41
5881 13852 7.389053 GGTACAAATGATCTGGAACATAGATCC 59.611 40.741 11.27 0.00 46.35 3.36
5882 13853 7.933577 TGGTACAAATGATCTGGAACATAGATC 59.066 37.037 7.80 7.80 42.68 2.75
5884 13855 7.194112 TGGTACAAATGATCTGGAACATAGA 57.806 36.000 0.00 0.00 32.09 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.