Multiple sequence alignment - TraesCS4B01G328200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G328200 chr4B 100.000 6589 0 0 1 6589 619074288 619080876 0.000000e+00 12168.0
1 TraesCS4B01G328200 chr4B 83.396 265 31 6 2410 2661 619076435 619076699 3.970000e-57 233.0
2 TraesCS4B01G328200 chr4B 83.396 265 31 6 2148 2412 619076697 619076948 3.970000e-57 233.0
3 TraesCS4B01G328200 chr4B 99.153 118 1 0 1 118 19892438 19892321 5.180000e-51 213.0
4 TraesCS4B01G328200 chr4B 99.153 118 1 0 1 118 123862117 123862000 5.180000e-51 213.0
5 TraesCS4B01G328200 chr5A 92.039 2751 134 41 3144 5847 666303999 666306711 0.000000e+00 3788.0
6 TraesCS4B01G328200 chr5A 88.678 2261 130 53 811 3022 666301456 666303639 0.000000e+00 2641.0
7 TraesCS4B01G328200 chr5A 84.906 265 28 7 2148 2412 666303026 666303278 2.360000e-64 257.0
8 TraesCS4B01G328200 chr5A 86.897 145 11 1 3021 3157 666303736 666303880 8.850000e-34 156.0
9 TraesCS4B01G328200 chr5A 84.138 145 6 4 125 267 666300312 666300441 2.490000e-24 124.0
10 TraesCS4B01G328200 chr4D 92.748 2289 107 18 3021 5283 485523036 485525291 0.000000e+00 3253.0
11 TraesCS4B01G328200 chr4D 92.036 1105 50 17 5317 6404 485525415 485526498 0.000000e+00 1519.0
12 TraesCS4B01G328200 chr4D 88.481 1172 35 43 709 1865 485520759 485521845 0.000000e+00 1325.0
13 TraesCS4B01G328200 chr4D 91.358 567 29 11 1862 2412 485522008 485522570 0.000000e+00 758.0
14 TraesCS4B01G328200 chr4D 88.394 629 47 10 2420 3022 485522308 485522936 0.000000e+00 734.0
15 TraesCS4B01G328200 chr4D 86.624 157 11 5 140 295 485520127 485520274 1.470000e-36 165.0
16 TraesCS4B01G328200 chr1A 84.392 378 33 9 5882 6242 554101987 554102355 1.360000e-91 348.0
17 TraesCS4B01G328200 chr1A 85.475 179 13 10 6229 6404 554102385 554102553 2.440000e-39 174.0
18 TraesCS4B01G328200 chr1A 87.943 141 14 2 1514 1654 91112416 91112553 5.290000e-36 163.0
19 TraesCS4B01G328200 chr1A 85.161 155 23 0 2682 2836 365066359 365066513 6.840000e-35 159.0
20 TraesCS4B01G328200 chr1B 83.598 378 34 12 5882 6242 637396685 637397051 4.930000e-86 329.0
21 TraesCS4B01G328200 chr1B 99.153 118 1 0 1 118 469385774 469385891 5.180000e-51 213.0
22 TraesCS4B01G328200 chr1B 88.636 176 10 7 6229 6404 637397081 637397246 8.660000e-49 206.0
23 TraesCS4B01G328200 chr1B 85.034 147 22 0 2690 2836 394407281 394407427 4.120000e-32 150.0
24 TraesCS4B01G328200 chr5B 99.160 119 1 0 1 119 296167492 296167610 1.440000e-51 215.0
25 TraesCS4B01G328200 chr5B 99.160 119 1 0 1 119 476322633 476322751 1.440000e-51 215.0
26 TraesCS4B01G328200 chr5B 99.153 118 1 0 1 118 334739152 334739269 5.180000e-51 213.0
27 TraesCS4B01G328200 chr5B 99.153 118 1 0 1 118 593334523 593334406 5.180000e-51 213.0
28 TraesCS4B01G328200 chr5B 99.153 118 1 0 1 118 654247224 654247341 5.180000e-51 213.0
29 TraesCS4B01G328200 chr7B 99.153 118 1 0 1 118 175382879 175382762 5.180000e-51 213.0
30 TraesCS4B01G328200 chr7B 82.775 209 16 10 4766 4970 717629920 717629728 1.140000e-37 169.0
31 TraesCS4B01G328200 chr3D 88.652 141 14 2 1514 1654 57183988 57184126 3.160000e-38 171.0
32 TraesCS4B01G328200 chr1D 84.358 179 15 10 6229 6404 462333950 462334118 5.290000e-36 163.0
33 TraesCS4B01G328200 chr1D 84.416 154 23 1 2684 2836 293389844 293389997 4.120000e-32 150.0
34 TraesCS4B01G328200 chr6D 87.402 127 15 1 6462 6587 174394397 174394523 1.910000e-30 145.0
35 TraesCS4B01G328200 chr4A 85.271 129 14 4 6460 6585 641246137 641246263 1.930000e-25 128.0
36 TraesCS4B01G328200 chr3B 97.143 35 1 0 6486 6520 734545155 734545121 7.140000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G328200 chr4B 619074288 619080876 6588 False 12168.000000 12168 100.000000 1 6589 1 chr4B.!!$F1 6588
1 TraesCS4B01G328200 chr4B 619076435 619076948 513 False 233.000000 233 83.396000 2148 2661 2 chr4B.!!$F2 513
2 TraesCS4B01G328200 chr5A 666300312 666306711 6399 False 1393.200000 3788 87.331600 125 5847 5 chr5A.!!$F1 5722
3 TraesCS4B01G328200 chr4D 485520127 485526498 6371 False 1292.333333 3253 89.940167 140 6404 6 chr4D.!!$F1 6264
4 TraesCS4B01G328200 chr1A 554101987 554102553 566 False 261.000000 348 84.933500 5882 6404 2 chr1A.!!$F3 522
5 TraesCS4B01G328200 chr1B 637396685 637397246 561 False 267.500000 329 86.117000 5882 6404 2 chr1B.!!$F3 522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
772 1447 0.171679 CGCGTGGGTACATGACTACA 59.828 55.0 0.0 0.0 35.58 2.74 F
783 1458 0.182061 ATGACTACATGGGCAGCAGG 59.818 55.0 0.0 0.0 35.21 4.85 F
1449 2146 0.250640 CTGTCTGCCTGCCTCTGTTT 60.251 55.0 0.0 0.0 0.00 2.83 F
2672 3585 0.934496 TGCGTTTCAGTCCACTTTCG 59.066 50.0 0.0 0.0 0.00 3.46 F
3905 5081 1.542492 ATTCAGCTCTGGCACCAAAG 58.458 50.0 0.0 0.0 41.70 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1706 2411 0.394192 TGCTCCGATCAATGGCTAGG 59.606 55.000 0.00 0.0 0.00 3.02 R
1996 2869 1.595929 TCACGCGTTTGGGGAACTC 60.596 57.895 10.22 0.0 36.06 3.01 R
3165 4325 3.131933 TGCAAGTGCTTTAGCCTTTCAAA 59.868 39.130 4.69 0.0 42.66 2.69 R
4135 5320 0.321671 TCCTTCAGTGCAGCAGGTAC 59.678 55.000 0.00 0.0 0.00 3.34 R
5735 7019 0.456312 CACGACTCTACGGCACTTCC 60.456 60.000 0.00 0.0 37.61 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.793252 ACGAATCCAATGAGATAATTTTTCTTG 57.207 29.630 0.00 0.00 0.00 3.02
32 33 8.814235 CCAATGAGATAATTTTTCTTGACATGC 58.186 33.333 0.00 0.00 0.00 4.06
33 34 9.361315 CAATGAGATAATTTTTCTTGACATGCA 57.639 29.630 0.00 0.00 0.00 3.96
44 45 9.932699 TTTTTCTTGACATGCATTAACATTTTG 57.067 25.926 0.00 0.00 0.00 2.44
45 46 8.659925 TTTCTTGACATGCATTAACATTTTGT 57.340 26.923 0.00 0.00 0.00 2.83
46 47 8.659925 TTCTTGACATGCATTAACATTTTGTT 57.340 26.923 0.00 0.00 43.88 2.83
47 48 9.755804 TTCTTGACATGCATTAACATTTTGTTA 57.244 25.926 0.00 0.00 41.45 2.41
48 49 9.409312 TCTTGACATGCATTAACATTTTGTTAG 57.591 29.630 0.00 0.00 42.93 2.34
49 50 9.195411 CTTGACATGCATTAACATTTTGTTAGT 57.805 29.630 0.00 0.00 42.93 2.24
50 51 9.539825 TTGACATGCATTAACATTTTGTTAGTT 57.460 25.926 0.00 0.00 42.93 2.24
77 78 9.796120 AAATCTTTAGTCGAAATTTGACACAAA 57.204 25.926 15.09 12.50 38.83 2.83
78 79 8.782533 ATCTTTAGTCGAAATTTGACACAAAC 57.217 30.769 15.09 0.00 38.83 2.93
79 80 7.981142 TCTTTAGTCGAAATTTGACACAAACT 58.019 30.769 15.09 0.00 38.83 2.66
80 81 9.100554 TCTTTAGTCGAAATTTGACACAAACTA 57.899 29.630 15.09 0.00 38.83 2.24
81 82 9.155053 CTTTAGTCGAAATTTGACACAAACTAC 57.845 33.333 15.09 0.00 38.83 2.73
82 83 6.671614 AGTCGAAATTTGACACAAACTACA 57.328 33.333 15.09 0.00 38.83 2.74
83 84 7.079182 AGTCGAAATTTGACACAAACTACAA 57.921 32.000 15.09 0.00 38.83 2.41
84 85 7.531716 AGTCGAAATTTGACACAAACTACAAA 58.468 30.769 15.09 0.00 38.83 2.83
85 86 7.696453 AGTCGAAATTTGACACAAACTACAAAG 59.304 33.333 15.09 0.00 38.83 2.77
86 87 6.970043 TCGAAATTTGACACAAACTACAAAGG 59.030 34.615 0.00 0.00 36.07 3.11
87 88 6.198216 CGAAATTTGACACAAACTACAAAGGG 59.802 38.462 0.00 0.00 36.07 3.95
88 89 4.993029 TTTGACACAAACTACAAAGGGG 57.007 40.909 0.00 0.00 0.00 4.79
89 90 3.935818 TGACACAAACTACAAAGGGGA 57.064 42.857 0.00 0.00 0.00 4.81
90 91 3.547746 TGACACAAACTACAAAGGGGAC 58.452 45.455 0.00 0.00 0.00 4.46
105 106 2.904697 GGGACCTATAAACCAGGACG 57.095 55.000 0.00 0.00 36.61 4.79
106 107 1.415289 GGGACCTATAAACCAGGACGG 59.585 57.143 0.00 0.00 42.50 4.79
107 108 2.391678 GGACCTATAAACCAGGACGGA 58.608 52.381 0.00 0.00 38.63 4.69
108 109 2.364647 GGACCTATAAACCAGGACGGAG 59.635 54.545 0.00 0.00 38.63 4.63
109 110 2.364647 GACCTATAAACCAGGACGGAGG 59.635 54.545 0.00 0.00 38.63 4.30
110 111 2.292719 ACCTATAAACCAGGACGGAGGT 60.293 50.000 0.00 0.00 40.61 3.85
111 112 3.052642 ACCTATAAACCAGGACGGAGGTA 60.053 47.826 0.00 0.00 35.66 3.08
112 113 3.573110 CCTATAAACCAGGACGGAGGTAG 59.427 52.174 0.00 0.00 37.07 3.18
113 114 2.610438 TAAACCAGGACGGAGGTAGT 57.390 50.000 0.00 0.00 37.07 2.73
114 115 2.610438 AAACCAGGACGGAGGTAGTA 57.390 50.000 0.00 0.00 37.07 1.82
115 116 1.844687 AACCAGGACGGAGGTAGTAC 58.155 55.000 0.00 0.00 37.07 2.73
116 117 0.998145 ACCAGGACGGAGGTAGTACT 59.002 55.000 0.00 0.00 36.07 2.73
117 118 2.200081 ACCAGGACGGAGGTAGTACTA 58.800 52.381 0.00 0.00 36.07 1.82
118 119 2.172293 ACCAGGACGGAGGTAGTACTAG 59.828 54.545 1.87 0.00 36.07 2.57
119 120 2.437281 CCAGGACGGAGGTAGTACTAGA 59.563 54.545 1.87 0.00 36.56 2.43
120 121 3.118112 CCAGGACGGAGGTAGTACTAGAA 60.118 52.174 1.87 0.00 36.56 2.10
121 122 4.521146 CAGGACGGAGGTAGTACTAGAAA 58.479 47.826 1.87 0.00 30.29 2.52
122 123 4.335037 CAGGACGGAGGTAGTACTAGAAAC 59.665 50.000 1.87 0.00 30.29 2.78
123 124 4.227073 AGGACGGAGGTAGTACTAGAAACT 59.773 45.833 1.87 2.06 29.47 2.66
124 125 5.426833 AGGACGGAGGTAGTACTAGAAACTA 59.573 44.000 1.87 1.01 29.47 2.24
125 126 5.757808 GGACGGAGGTAGTACTAGAAACTAG 59.242 48.000 1.87 0.00 30.26 2.57
126 127 5.679601 ACGGAGGTAGTACTAGAAACTAGG 58.320 45.833 1.87 0.00 30.26 3.02
127 128 5.426833 ACGGAGGTAGTACTAGAAACTAGGA 59.573 44.000 1.87 0.00 30.26 2.94
128 129 6.069963 ACGGAGGTAGTACTAGAAACTAGGAA 60.070 42.308 1.87 0.00 30.26 3.36
154 155 2.331194 CGTATGGAAACGGTCGTCTTT 58.669 47.619 0.00 0.00 39.19 2.52
256 257 3.763356 GTACGGTCCGGTCACCCC 61.763 72.222 17.28 0.00 31.99 4.95
363 691 3.785499 GTCGTTTTCGCCCGGCTC 61.785 66.667 8.05 0.00 43.73 4.70
428 786 2.493907 AAGGAGCAAGAGGACGCGAC 62.494 60.000 15.93 6.56 0.00 5.19
448 806 4.415150 CCAGTGCGAGTGGGGCAT 62.415 66.667 0.00 0.00 43.19 4.40
478 839 4.466827 GTCCTCCCTAAAACACAAGGAAA 58.533 43.478 0.00 0.00 34.84 3.13
484 869 3.066203 CCTAAAACACAAGGAAACACGCT 59.934 43.478 0.00 0.00 34.58 5.07
493 1128 4.293626 AAACACGCTCGCACGCAC 62.294 61.111 0.00 0.00 36.19 5.34
523 1158 3.942130 AGAATTTGCGGGAAAAGGAAG 57.058 42.857 0.00 0.00 0.00 3.46
530 1165 2.235891 GCGGGAAAAGGAAGAGGAAAA 58.764 47.619 0.00 0.00 0.00 2.29
537 1172 5.011125 GGAAAAGGAAGAGGAAAAGGAAAGG 59.989 44.000 0.00 0.00 0.00 3.11
575 1210 1.602377 ACGAAAGGAAAGAAGTTGCGG 59.398 47.619 0.00 0.00 31.66 5.69
578 1213 3.667960 CGAAAGGAAAGAAGTTGCGGATG 60.668 47.826 0.00 0.00 31.66 3.51
583 1218 3.944476 AGAAGTTGCGGATGCTTCT 57.056 47.368 15.11 15.11 42.65 2.85
605 1240 6.662616 TCTGAAAGAAAGAAATGAGAAAGCG 58.337 36.000 0.00 0.00 42.31 4.68
606 1241 5.762045 TGAAAGAAAGAAATGAGAAAGCGG 58.238 37.500 0.00 0.00 0.00 5.52
607 1242 5.530915 TGAAAGAAAGAAATGAGAAAGCGGA 59.469 36.000 0.00 0.00 0.00 5.54
608 1243 6.039270 TGAAAGAAAGAAATGAGAAAGCGGAA 59.961 34.615 0.00 0.00 0.00 4.30
609 1244 6.581171 AAGAAAGAAATGAGAAAGCGGAAT 57.419 33.333 0.00 0.00 0.00 3.01
610 1245 6.581171 AGAAAGAAATGAGAAAGCGGAATT 57.419 33.333 0.00 0.00 0.00 2.17
611 1246 6.385033 AGAAAGAAATGAGAAAGCGGAATTG 58.615 36.000 0.00 0.00 0.00 2.32
612 1247 4.708726 AGAAATGAGAAAGCGGAATTGG 57.291 40.909 0.00 0.00 0.00 3.16
613 1248 2.947448 AATGAGAAAGCGGAATTGGC 57.053 45.000 0.00 0.00 0.00 4.52
635 1270 5.812127 GGCAACCAATAATGATCTTCCAAAC 59.188 40.000 0.00 0.00 0.00 2.93
637 1272 6.351286 GCAACCAATAATGATCTTCCAAACCT 60.351 38.462 0.00 0.00 0.00 3.50
638 1273 7.260603 CAACCAATAATGATCTTCCAAACCTC 58.739 38.462 0.00 0.00 0.00 3.85
639 1274 6.735556 ACCAATAATGATCTTCCAAACCTCT 58.264 36.000 0.00 0.00 0.00 3.69
640 1275 7.184862 ACCAATAATGATCTTCCAAACCTCTT 58.815 34.615 0.00 0.00 0.00 2.85
642 1277 7.559170 CCAATAATGATCTTCCAAACCTCTTCT 59.441 37.037 0.00 0.00 0.00 2.85
644 1279 4.559862 TGATCTTCCAAACCTCTTCTCC 57.440 45.455 0.00 0.00 0.00 3.71
645 1280 3.909995 TGATCTTCCAAACCTCTTCTCCA 59.090 43.478 0.00 0.00 0.00 3.86
646 1281 4.019860 TGATCTTCCAAACCTCTTCTCCAG 60.020 45.833 0.00 0.00 0.00 3.86
647 1282 2.639839 TCTTCCAAACCTCTTCTCCAGG 59.360 50.000 0.00 0.00 37.03 4.45
672 1325 1.740296 CCGTCCGGCACTGTAAAGG 60.740 63.158 0.00 0.00 0.00 3.11
676 1329 1.745489 CCGGCACTGTAAAGGGAGC 60.745 63.158 0.00 0.00 0.00 4.70
695 1348 1.091771 CGAGCCGCCAATCAGTGATT 61.092 55.000 12.75 12.75 31.86 2.57
705 1358 3.785486 CAATCAGTGATTGGCTAGACGA 58.215 45.455 30.40 0.00 43.78 4.20
707 1360 2.723273 TCAGTGATTGGCTAGACGAGA 58.277 47.619 0.00 0.00 0.00 4.04
726 1401 0.526662 ACGGATGTGAACGAGGTCTC 59.473 55.000 0.00 0.00 0.00 3.36
727 1402 0.526211 CGGATGTGAACGAGGTCTCA 59.474 55.000 0.00 0.00 0.00 3.27
728 1403 1.468224 CGGATGTGAACGAGGTCTCAG 60.468 57.143 0.00 0.00 0.00 3.35
729 1404 1.634702 GATGTGAACGAGGTCTCAGC 58.365 55.000 0.00 0.00 0.00 4.26
730 1405 0.247736 ATGTGAACGAGGTCTCAGCC 59.752 55.000 0.00 0.00 0.00 4.85
767 1442 4.460683 GGCCGCGTGGGTACATGA 62.461 66.667 18.41 0.00 38.44 3.07
768 1443 3.192922 GCCGCGTGGGTACATGAC 61.193 66.667 18.41 0.00 38.44 3.06
769 1444 2.577059 CCGCGTGGGTACATGACT 59.423 61.111 7.26 0.00 35.58 3.41
771 1446 0.526954 CCGCGTGGGTACATGACTAC 60.527 60.000 7.26 0.00 35.58 2.73
772 1447 0.171679 CGCGTGGGTACATGACTACA 59.828 55.000 0.00 0.00 35.58 2.74
773 1448 1.202371 CGCGTGGGTACATGACTACAT 60.202 52.381 0.00 0.00 35.58 2.29
781 1456 3.482147 CATGACTACATGGGCAGCA 57.518 52.632 0.00 0.00 46.95 4.41
782 1457 1.306148 CATGACTACATGGGCAGCAG 58.694 55.000 0.00 0.00 46.95 4.24
783 1458 0.182061 ATGACTACATGGGCAGCAGG 59.818 55.000 0.00 0.00 35.21 4.85
784 1459 0.909133 TGACTACATGGGCAGCAGGA 60.909 55.000 0.00 0.00 0.00 3.86
785 1460 0.462759 GACTACATGGGCAGCAGGAC 60.463 60.000 0.00 0.00 0.00 3.85
786 1461 1.522355 CTACATGGGCAGCAGGACG 60.522 63.158 0.00 0.00 0.00 4.79
787 1462 3.680620 TACATGGGCAGCAGGACGC 62.681 63.158 0.00 0.00 42.91 5.19
789 1464 4.349503 ATGGGCAGCAGGACGCAA 62.350 61.111 0.00 0.00 46.13 4.85
821 1496 3.793144 CGCAGGCGAGAAACCAGC 61.793 66.667 8.15 0.00 42.83 4.85
867 1543 1.647545 GCACAGCGATAAAGCCAGCA 61.648 55.000 0.00 0.00 38.01 4.41
868 1544 0.376152 CACAGCGATAAAGCCAGCAG 59.624 55.000 0.00 0.00 38.01 4.24
951 1629 2.284478 TGCTCCTGCTCCTGCTCT 60.284 61.111 0.00 0.00 40.48 4.09
953 1631 1.449956 GCTCCTGCTCCTGCTCTTG 60.450 63.158 0.00 0.00 40.48 3.02
955 1633 1.901654 CTCCTGCTCCTGCTCTTGCT 61.902 60.000 0.00 0.00 40.48 3.91
956 1634 1.449956 CCTGCTCCTGCTCTTGCTC 60.450 63.158 0.00 0.00 40.48 4.26
960 1638 1.897225 GCTCCTGCTCTTGCTCCTGA 61.897 60.000 0.00 0.00 40.48 3.86
961 1639 0.612229 CTCCTGCTCTTGCTCCTGAA 59.388 55.000 0.00 0.00 40.48 3.02
963 1641 0.392729 CCTGCTCTTGCTCCTGAAGG 60.393 60.000 0.00 0.00 40.48 3.46
964 1642 0.392729 CTGCTCTTGCTCCTGAAGGG 60.393 60.000 0.00 0.00 40.48 3.95
965 1643 0.837691 TGCTCTTGCTCCTGAAGGGA 60.838 55.000 0.00 0.00 42.68 4.20
966 1644 0.326264 GCTCTTGCTCCTGAAGGGAA 59.674 55.000 0.00 0.00 44.58 3.97
1423 2120 2.290577 ACCTCTGTTTCCATTCCTCTGC 60.291 50.000 0.00 0.00 0.00 4.26
1431 2128 1.633915 CCATTCCTCTGCCTGCCTCT 61.634 60.000 0.00 0.00 0.00 3.69
1439 2136 3.715097 GCCTGCCTCTGTCTGCCT 61.715 66.667 0.00 0.00 0.00 4.75
1440 2137 2.268280 CCTGCCTCTGTCTGCCTG 59.732 66.667 0.00 0.00 0.00 4.85
1441 2138 2.436292 CTGCCTCTGTCTGCCTGC 60.436 66.667 0.00 0.00 0.00 4.85
1442 2139 3.972971 CTGCCTCTGTCTGCCTGCC 62.973 68.421 0.00 0.00 0.00 4.85
1443 2140 3.715097 GCCTCTGTCTGCCTGCCT 61.715 66.667 0.00 0.00 0.00 4.75
1444 2141 2.583520 CCTCTGTCTGCCTGCCTC 59.416 66.667 0.00 0.00 0.00 4.70
1445 2142 1.988956 CCTCTGTCTGCCTGCCTCT 60.989 63.158 0.00 0.00 0.00 3.69
1446 2143 1.218585 CTCTGTCTGCCTGCCTCTG 59.781 63.158 0.00 0.00 0.00 3.35
1447 2144 1.534959 TCTGTCTGCCTGCCTCTGT 60.535 57.895 0.00 0.00 0.00 3.41
1448 2145 1.123861 TCTGTCTGCCTGCCTCTGTT 61.124 55.000 0.00 0.00 0.00 3.16
1449 2146 0.250640 CTGTCTGCCTGCCTCTGTTT 60.251 55.000 0.00 0.00 0.00 2.83
1459 2156 2.746362 CTGCCTCTGTTTGACTGGAATC 59.254 50.000 0.00 0.00 0.00 2.52
1671 2376 1.302993 TGTAAGTTTGCTCGCCCCC 60.303 57.895 0.00 0.00 0.00 5.40
1672 2377 1.002502 GTAAGTTTGCTCGCCCCCT 60.003 57.895 0.00 0.00 0.00 4.79
1706 2411 1.492720 GCCGATCGATCCTTCTTCAC 58.507 55.000 18.66 0.00 0.00 3.18
1717 2422 3.181329 TCCTTCTTCACCTAGCCATTGA 58.819 45.455 0.00 0.00 0.00 2.57
1719 2424 4.133078 CCTTCTTCACCTAGCCATTGATC 58.867 47.826 0.00 0.00 0.00 2.92
1785 2490 4.022068 TCTGTGGATTTTGCTTTGTCCATC 60.022 41.667 5.09 1.69 42.27 3.51
1948 2821 7.267857 ACTATATGCCATTCCTTTTCTTTTGC 58.732 34.615 0.00 0.00 0.00 3.68
1994 2867 1.333619 CGATTGGGACCAATTAAGGCG 59.666 52.381 17.04 11.75 45.50 5.52
1996 2869 1.309499 TTGGGACCAATTAAGGCGCG 61.309 55.000 0.00 0.00 0.00 6.86
2080 2956 1.955778 TGCAGTTCAATGTGGAAGTGG 59.044 47.619 11.43 0.00 44.61 4.00
2124 3000 3.545703 AGTTATGACCAATGCAGGTAGC 58.454 45.455 0.00 0.00 43.38 3.58
2672 3585 0.934496 TGCGTTTCAGTCCACTTTCG 59.066 50.000 0.00 0.00 0.00 3.46
2881 3794 8.773404 ACTCGTTTTATCCTACCATTATATGC 57.227 34.615 0.00 0.00 0.00 3.14
2883 3796 8.542497 TCGTTTTATCCTACCATTATATGCAC 57.458 34.615 0.00 0.00 0.00 4.57
2918 3831 7.194112 TGTTGTCTCATATGGTTAAGGATGA 57.806 36.000 2.13 0.00 0.00 2.92
2995 3913 2.364970 TGGGAACTGGAAAGTGCATTTG 59.635 45.455 0.00 0.00 0.00 2.32
3010 3928 5.105228 AGTGCATTTGGTGATTCCATTTAGG 60.105 40.000 0.00 0.00 46.60 2.69
3015 3933 5.720371 TTGGTGATTCCATTTAGGTTGTG 57.280 39.130 0.00 0.00 46.60 3.33
3016 3934 4.991776 TGGTGATTCCATTTAGGTTGTGA 58.008 39.130 0.00 0.00 41.93 3.58
3034 4053 3.472652 GTGAGACCACACACCAAACATA 58.527 45.455 0.00 0.00 42.72 2.29
3119 4146 8.389779 TCTTAGTCAAGTTGCATAATGTTTCA 57.610 30.769 0.00 0.00 33.20 2.69
3128 4155 8.470040 AGTTGCATAATGTTTCATTGATTCAC 57.530 30.769 5.40 0.00 0.00 3.18
3165 4325 8.366359 AGAAATTGTTACTTGATTAAGGCCAT 57.634 30.769 5.01 0.00 38.26 4.40
3207 4367 4.157105 TGCACTTCTGGATGATGTTGATTG 59.843 41.667 0.00 0.00 31.70 2.67
3211 4371 4.911514 TCTGGATGATGTTGATTGCATG 57.088 40.909 0.00 0.00 0.00 4.06
3219 4379 3.455990 TGTTGATTGCATGCAACAGTT 57.544 38.095 34.10 19.35 46.57 3.16
3239 4399 4.870426 AGTTGTATGCACAATTCTCTACCG 59.130 41.667 0.00 0.00 46.03 4.02
3250 4410 5.661759 ACAATTCTCTACCGGTTATCCTCTT 59.338 40.000 15.04 0.00 0.00 2.85
3254 4414 5.266788 TCTCTACCGGTTATCCTCTTTGAA 58.733 41.667 15.04 0.00 0.00 2.69
3559 4723 4.451629 AACAGAATACCGACTTCGACAT 57.548 40.909 0.00 0.00 43.02 3.06
3588 4754 6.375174 TGGAATGATACCACAATTTGAGACTG 59.625 38.462 2.79 0.00 32.03 3.51
3610 4776 7.466804 ACTGGAACTGGGACAAATTAGAATAA 58.533 34.615 0.00 0.00 38.70 1.40
3739 4914 2.994186 ACTTACAAACGTGTGGAGGT 57.006 45.000 11.18 5.07 38.82 3.85
3842 5017 7.920160 TTTACATCTGTTATTCTGTGCATGA 57.080 32.000 0.00 0.00 0.00 3.07
3847 5022 9.783081 ACATCTGTTATTCTGTGCATGATATTA 57.217 29.630 0.00 0.00 0.00 0.98
3858 5033 7.922278 TCTGTGCATGATATTAATTTGCTTTCC 59.078 33.333 0.00 0.00 34.47 3.13
3859 5034 7.784037 TGTGCATGATATTAATTTGCTTTCCT 58.216 30.769 0.00 0.00 34.47 3.36
3860 5035 7.922278 TGTGCATGATATTAATTTGCTTTCCTC 59.078 33.333 0.00 0.00 34.47 3.71
3894 5070 6.036517 ACACTCGAAAATGTCATATTCAGCTC 59.963 38.462 0.00 0.00 0.00 4.09
3905 5081 1.542492 ATTCAGCTCTGGCACCAAAG 58.458 50.000 0.00 0.00 41.70 2.77
4013 5198 2.039216 TGGAAAACGCATACCTCCTTCA 59.961 45.455 0.00 0.00 0.00 3.02
4045 5230 8.885494 TGTTTTCTTGCTATTAATTGTGCTTT 57.115 26.923 0.00 0.00 0.00 3.51
4098 5283 2.156098 GAAAATACCTTGGCACACCGA 58.844 47.619 0.00 0.00 39.29 4.69
4135 5320 8.575649 ACCATGTATTTTTCCCTTAGTACAAG 57.424 34.615 0.00 0.00 0.00 3.16
4142 5327 4.813750 TTCCCTTAGTACAAGTACCTGC 57.186 45.455 6.74 0.00 36.75 4.85
4168 5353 3.693085 ACTGAAGGATGAATGATGCACAC 59.307 43.478 0.00 0.00 0.00 3.82
4185 5370 3.634283 CACACGTATTGGGTTGGTTTTC 58.366 45.455 0.00 0.00 0.00 2.29
4194 5379 0.673985 GGTTGGTTTTCAGCCTGACC 59.326 55.000 0.00 0.00 42.63 4.02
4199 5384 2.155279 GGTTTTCAGCCTGACCTTCTC 58.845 52.381 0.00 0.00 0.00 2.87
4201 5386 1.048601 TTTCAGCCTGACCTTCTCGT 58.951 50.000 0.00 0.00 0.00 4.18
4284 5469 5.574188 AGCCTTGTATCCTTCAGAAAATGT 58.426 37.500 0.00 0.00 0.00 2.71
4303 5488 6.704289 AATGTACACGTAGCTGGTATTCTA 57.296 37.500 0.00 0.00 0.00 2.10
4361 5546 2.460757 AATGCAGGCGCTGAAATTTT 57.539 40.000 7.64 0.00 39.64 1.82
4366 5551 2.863704 GCAGGCGCTGAAATTTTCTGTT 60.864 45.455 7.64 0.60 32.44 3.16
4367 5552 3.611530 GCAGGCGCTGAAATTTTCTGTTA 60.612 43.478 7.64 0.00 32.44 2.41
4401 5586 2.438021 TCTGCTTCTGGGTGTAACTTGT 59.562 45.455 0.00 0.00 36.74 3.16
4790 5976 8.234546 CCCACTGAACTGTAATTATAACACAAC 58.765 37.037 3.95 1.08 0.00 3.32
4893 6079 4.327680 ACCAAAGCATGAGGAAGAAGTAC 58.672 43.478 0.00 0.00 0.00 2.73
4894 6080 3.691609 CCAAAGCATGAGGAAGAAGTACC 59.308 47.826 0.00 0.00 0.00 3.34
4895 6081 4.566488 CCAAAGCATGAGGAAGAAGTACCT 60.566 45.833 0.00 0.00 39.41 3.08
4955 6141 1.210204 TTTCTCCCATGGCTGAGGCT 61.210 55.000 15.59 0.00 38.73 4.58
5030 6216 3.182967 CAGAGACGATGAAGGCAGTAAC 58.817 50.000 0.00 0.00 0.00 2.50
5052 6238 4.080863 ACGAGGTAAGGATCAGAGCATTTT 60.081 41.667 0.00 0.00 0.00 1.82
5053 6239 4.272018 CGAGGTAAGGATCAGAGCATTTTG 59.728 45.833 0.00 0.00 0.00 2.44
5054 6240 5.431765 GAGGTAAGGATCAGAGCATTTTGA 58.568 41.667 0.00 0.00 0.00 2.69
5055 6241 6.011122 AGGTAAGGATCAGAGCATTTTGAT 57.989 37.500 0.00 0.00 36.77 2.57
5056 6242 6.430007 AGGTAAGGATCAGAGCATTTTGATT 58.570 36.000 0.00 0.00 34.33 2.57
5057 6243 6.545298 AGGTAAGGATCAGAGCATTTTGATTC 59.455 38.462 0.00 0.00 34.33 2.52
5058 6244 5.848833 AAGGATCAGAGCATTTTGATTCC 57.151 39.130 0.00 0.00 34.33 3.01
5059 6245 4.863548 AGGATCAGAGCATTTTGATTCCA 58.136 39.130 0.00 0.00 34.33 3.53
5060 6246 4.643784 AGGATCAGAGCATTTTGATTCCAC 59.356 41.667 0.00 0.00 34.33 4.02
5061 6247 4.497006 GGATCAGAGCATTTTGATTCCACG 60.497 45.833 0.00 0.00 34.33 4.94
5062 6248 3.411446 TCAGAGCATTTTGATTCCACGT 58.589 40.909 0.00 0.00 0.00 4.49
5063 6249 3.436704 TCAGAGCATTTTGATTCCACGTC 59.563 43.478 0.00 0.00 0.00 4.34
5064 6250 3.438087 CAGAGCATTTTGATTCCACGTCT 59.562 43.478 0.00 0.00 0.00 4.18
5065 6251 4.631377 CAGAGCATTTTGATTCCACGTCTA 59.369 41.667 0.00 0.00 0.00 2.59
5066 6252 5.295292 CAGAGCATTTTGATTCCACGTCTAT 59.705 40.000 0.00 0.00 0.00 1.98
5067 6253 5.882557 AGAGCATTTTGATTCCACGTCTATT 59.117 36.000 0.00 0.00 0.00 1.73
5068 6254 6.037610 AGAGCATTTTGATTCCACGTCTATTC 59.962 38.462 0.00 0.00 0.00 1.75
5069 6255 5.647658 AGCATTTTGATTCCACGTCTATTCA 59.352 36.000 0.00 0.00 0.00 2.57
5070 6256 6.319658 AGCATTTTGATTCCACGTCTATTCAT 59.680 34.615 0.00 0.00 0.00 2.57
5071 6257 6.974622 GCATTTTGATTCCACGTCTATTCATT 59.025 34.615 0.00 0.00 0.00 2.57
5172 6358 2.422519 GCAGATGAGGGACATGTTGGAT 60.423 50.000 0.00 0.00 39.56 3.41
5184 6370 1.212751 GTTGGATGCCAGGAAACGC 59.787 57.895 0.00 0.00 33.81 4.84
5249 6435 0.541392 TGCTATACACAGGTGGGCAG 59.459 55.000 4.24 0.00 34.19 4.85
5252 6438 2.158755 GCTATACACAGGTGGGCAGATT 60.159 50.000 4.24 0.00 34.19 2.40
5259 6445 4.165950 ACACAGGTGGGCAGATTGATAATA 59.834 41.667 4.24 0.00 34.19 0.98
5260 6446 5.163055 ACACAGGTGGGCAGATTGATAATAT 60.163 40.000 4.24 0.00 34.19 1.28
5261 6447 6.044287 ACACAGGTGGGCAGATTGATAATATA 59.956 38.462 4.24 0.00 34.19 0.86
5262 6448 7.114754 CACAGGTGGGCAGATTGATAATATAT 58.885 38.462 0.00 0.00 0.00 0.86
5263 6449 8.267183 CACAGGTGGGCAGATTGATAATATATA 58.733 37.037 0.00 0.00 0.00 0.86
5264 6450 9.007494 ACAGGTGGGCAGATTGATAATATATAT 57.993 33.333 0.00 0.00 0.00 0.86
5265 6451 9.281371 CAGGTGGGCAGATTGATAATATATATG 57.719 37.037 0.00 0.00 0.00 1.78
5266 6452 9.229276 AGGTGGGCAGATTGATAATATATATGA 57.771 33.333 0.00 0.00 0.00 2.15
5268 6454 9.499479 GTGGGCAGATTGATAATATATATGAGG 57.501 37.037 0.00 0.00 0.00 3.86
5269 6455 9.451206 TGGGCAGATTGATAATATATATGAGGA 57.549 33.333 0.00 0.00 0.00 3.71
5289 6569 9.933723 ATGAGGAATCCTTTTAATGTTCAAAAG 57.066 29.630 2.09 0.00 40.90 2.27
5306 6586 7.665559 TGTTCAAAAGATATGCTAGAACCAAGT 59.334 33.333 0.00 0.00 34.64 3.16
5310 6590 8.680903 CAAAAGATATGCTAGAACCAAGTTGAT 58.319 33.333 3.87 0.00 0.00 2.57
5311 6591 8.814038 AAAGATATGCTAGAACCAAGTTGATT 57.186 30.769 3.87 0.00 0.00 2.57
5313 6593 7.568349 AGATATGCTAGAACCAAGTTGATTCA 58.432 34.615 12.58 0.00 0.00 2.57
5314 6594 5.886960 ATGCTAGAACCAAGTTGATTCAC 57.113 39.130 12.58 2.20 0.00 3.18
5316 6596 4.997395 TGCTAGAACCAAGTTGATTCACTC 59.003 41.667 12.58 1.31 0.00 3.51
5320 6600 5.449553 AGAACCAAGTTGATTCACTCCTTT 58.550 37.500 12.58 0.00 0.00 3.11
5325 6605 5.048434 CCAAGTTGATTCACTCCTTTCCTTC 60.048 44.000 3.87 0.00 0.00 3.46
5326 6606 4.657013 AGTTGATTCACTCCTTTCCTTCC 58.343 43.478 0.00 0.00 0.00 3.46
5327 6607 3.721087 TGATTCACTCCTTTCCTTCCC 57.279 47.619 0.00 0.00 0.00 3.97
5328 6608 3.260205 TGATTCACTCCTTTCCTTCCCT 58.740 45.455 0.00 0.00 0.00 4.20
5332 6612 2.108250 TCACTCCTTTCCTTCCCTTTGG 59.892 50.000 0.00 0.00 0.00 3.28
5333 6613 1.429299 ACTCCTTTCCTTCCCTTTGGG 59.571 52.381 0.00 0.00 46.11 4.12
5334 6614 0.114364 TCCTTTCCTTCCCTTTGGGC 59.886 55.000 0.00 0.00 43.94 5.36
5408 6688 1.174712 GCTTGTGCCACCTCATGTGT 61.175 55.000 0.00 0.00 43.85 3.72
5735 7019 1.573108 TAGGGAGAAACTGCAGGGAG 58.427 55.000 19.93 0.00 0.00 4.30
5875 7169 7.201504 GGAGTTTACGGTTGTTAATTCTAGAGC 60.202 40.741 0.00 0.00 0.00 4.09
5985 7279 8.691661 TCCTAAGTAAATTAAGATTGGGATGC 57.308 34.615 0.00 0.00 0.00 3.91
6001 7295 3.898123 GGGATGCCTCTACTCTACAATCA 59.102 47.826 0.00 0.00 0.00 2.57
6034 7328 6.591261 GGTGAACTTAATTCGTTCTCACTTC 58.409 40.000 16.72 3.32 40.95 3.01
6042 7337 3.093717 TCGTTCTCACTTCTTCACACC 57.906 47.619 0.00 0.00 0.00 4.16
6050 7355 3.621268 TCACTTCTTCACACCGAACTTTG 59.379 43.478 0.00 0.00 0.00 2.77
6132 7443 1.909302 TCTTCTTACCAAGGGCTCCAG 59.091 52.381 0.00 0.00 0.00 3.86
6148 7459 3.062763 CTCCAGTAGCACAGTGAAACAG 58.937 50.000 4.15 0.00 41.43 3.16
6316 7677 7.322664 CCCATGTGCAAACTATACAAAGAAAT 58.677 34.615 0.00 0.00 0.00 2.17
6317 7678 8.465999 CCCATGTGCAAACTATACAAAGAAATA 58.534 33.333 0.00 0.00 0.00 1.40
6321 7682 9.727859 TGTGCAAACTATACAAAGAAATAGGTA 57.272 29.630 0.00 0.00 31.24 3.08
6322 7683 9.983804 GTGCAAACTATACAAAGAAATAGGTAC 57.016 33.333 0.00 0.00 31.24 3.34
6323 7684 9.727859 TGCAAACTATACAAAGAAATAGGTACA 57.272 29.630 0.00 0.00 31.24 2.90
6363 7724 2.102070 TCAATGGGTTTGCGACGTAT 57.898 45.000 0.00 0.00 35.16 3.06
6364 7725 1.735018 TCAATGGGTTTGCGACGTATG 59.265 47.619 0.00 0.00 35.16 2.39
6409 7770 3.554934 TCACATTATTCATGGGACTGCC 58.445 45.455 0.00 0.00 40.73 4.85
6410 7771 2.291465 CACATTATTCATGGGACTGCCG 59.709 50.000 0.00 0.00 38.84 5.69
6411 7772 1.881973 CATTATTCATGGGACTGCCGG 59.118 52.381 0.00 0.00 33.83 6.13
6412 7773 0.916086 TTATTCATGGGACTGCCGGT 59.084 50.000 1.90 0.00 33.83 5.28
6413 7774 1.796017 TATTCATGGGACTGCCGGTA 58.204 50.000 1.90 0.00 33.83 4.02
6414 7775 1.140312 ATTCATGGGACTGCCGGTAT 58.860 50.000 1.90 0.00 33.83 2.73
6415 7776 0.180171 TTCATGGGACTGCCGGTATG 59.820 55.000 1.90 0.00 33.83 2.39
6416 7777 0.689412 TCATGGGACTGCCGGTATGA 60.689 55.000 1.90 0.00 33.83 2.15
6417 7778 0.180171 CATGGGACTGCCGGTATGAA 59.820 55.000 1.90 0.00 33.83 2.57
6418 7779 1.140312 ATGGGACTGCCGGTATGAAT 58.860 50.000 1.90 0.00 33.83 2.57
6419 7780 1.796017 TGGGACTGCCGGTATGAATA 58.204 50.000 1.90 0.00 33.83 1.75
6420 7781 2.120312 TGGGACTGCCGGTATGAATAA 58.880 47.619 1.90 0.00 33.83 1.40
6421 7782 2.104111 TGGGACTGCCGGTATGAATAAG 59.896 50.000 1.90 0.00 33.83 1.73
6422 7783 2.367567 GGGACTGCCGGTATGAATAAGA 59.632 50.000 1.90 0.00 33.83 2.10
6423 7784 3.008049 GGGACTGCCGGTATGAATAAGAT 59.992 47.826 1.90 0.00 33.83 2.40
6424 7785 4.222145 GGGACTGCCGGTATGAATAAGATA 59.778 45.833 1.90 0.00 33.83 1.98
6425 7786 5.411781 GGACTGCCGGTATGAATAAGATAG 58.588 45.833 1.90 0.00 0.00 2.08
6426 7787 5.407407 ACTGCCGGTATGAATAAGATAGG 57.593 43.478 1.90 0.00 0.00 2.57
6427 7788 4.184629 CTGCCGGTATGAATAAGATAGGC 58.815 47.826 1.90 0.00 42.11 3.93
6428 7789 3.187700 GCCGGTATGAATAAGATAGGCG 58.812 50.000 1.90 0.00 32.36 5.52
6429 7790 3.187700 CCGGTATGAATAAGATAGGCGC 58.812 50.000 0.00 0.00 0.00 6.53
6430 7791 2.852413 CGGTATGAATAAGATAGGCGCG 59.148 50.000 0.00 0.00 0.00 6.86
6431 7792 2.603560 GGTATGAATAAGATAGGCGCGC 59.396 50.000 25.94 25.94 0.00 6.86
6432 7793 1.726853 ATGAATAAGATAGGCGCGCC 58.273 50.000 42.34 42.34 0.00 6.53
6444 7805 4.227134 CGCGCCATGGGACTAGCT 62.227 66.667 15.13 0.00 0.00 3.32
6445 7806 2.856628 CGCGCCATGGGACTAGCTA 61.857 63.158 15.13 0.00 0.00 3.32
6446 7807 1.005630 GCGCCATGGGACTAGCTAG 60.006 63.158 19.44 19.44 0.00 3.42
6447 7808 1.668294 CGCCATGGGACTAGCTAGG 59.332 63.158 24.35 7.12 0.00 3.02
6448 7809 0.827925 CGCCATGGGACTAGCTAGGA 60.828 60.000 24.35 6.14 0.00 2.94
6449 7810 1.650528 GCCATGGGACTAGCTAGGAT 58.349 55.000 24.35 4.53 0.00 3.24
6450 7811 1.981495 GCCATGGGACTAGCTAGGATT 59.019 52.381 24.35 3.74 0.00 3.01
6451 7812 2.373502 GCCATGGGACTAGCTAGGATTT 59.626 50.000 24.35 3.34 0.00 2.17
6452 7813 3.181439 GCCATGGGACTAGCTAGGATTTT 60.181 47.826 24.35 2.94 0.00 1.82
6453 7814 4.041691 GCCATGGGACTAGCTAGGATTTTA 59.958 45.833 24.35 6.45 0.00 1.52
6454 7815 5.552178 CCATGGGACTAGCTAGGATTTTAC 58.448 45.833 24.35 3.87 0.00 2.01
6455 7816 5.308237 CCATGGGACTAGCTAGGATTTTACT 59.692 44.000 24.35 0.59 0.00 2.24
6456 7817 6.183361 CCATGGGACTAGCTAGGATTTTACTT 60.183 42.308 24.35 0.00 0.00 2.24
6457 7818 6.886178 TGGGACTAGCTAGGATTTTACTTT 57.114 37.500 24.35 0.00 0.00 2.66
6458 7819 7.983166 TGGGACTAGCTAGGATTTTACTTTA 57.017 36.000 24.35 0.00 0.00 1.85
6459 7820 8.562949 TGGGACTAGCTAGGATTTTACTTTAT 57.437 34.615 24.35 0.00 0.00 1.40
6460 7821 8.999895 TGGGACTAGCTAGGATTTTACTTTATT 58.000 33.333 24.35 0.00 0.00 1.40
6461 7822 9.848710 GGGACTAGCTAGGATTTTACTTTATTT 57.151 33.333 24.35 0.00 0.00 1.40
6492 7853 3.648694 GAGGATTTCTCCCGGCCT 58.351 61.111 0.00 0.00 43.21 5.19
6493 7854 1.448069 GAGGATTTCTCCCGGCCTC 59.552 63.158 0.00 6.31 43.21 4.70
6494 7855 1.003573 AGGATTTCTCCCGGCCTCT 59.996 57.895 0.00 0.00 43.21 3.69
6495 7856 1.147153 GGATTTCTCCCGGCCTCTG 59.853 63.158 0.00 0.00 35.28 3.35
6496 7857 1.524849 GATTTCTCCCGGCCTCTGC 60.525 63.158 0.00 0.00 0.00 4.26
6497 7858 2.257409 GATTTCTCCCGGCCTCTGCA 62.257 60.000 0.00 0.00 40.13 4.41
6498 7859 1.639635 ATTTCTCCCGGCCTCTGCAT 61.640 55.000 0.00 0.00 40.13 3.96
6499 7860 2.257409 TTTCTCCCGGCCTCTGCATC 62.257 60.000 0.00 0.00 40.13 3.91
6500 7861 4.598894 CTCCCGGCCTCTGCATCG 62.599 72.222 0.00 0.00 40.13 3.84
6502 7863 4.161295 CCCGGCCTCTGCATCGAA 62.161 66.667 0.00 0.00 40.13 3.71
6503 7864 2.125147 CCGGCCTCTGCATCGAAA 60.125 61.111 0.00 0.00 40.13 3.46
6504 7865 1.745115 CCGGCCTCTGCATCGAAAA 60.745 57.895 0.00 0.00 40.13 2.29
6505 7866 1.709147 CCGGCCTCTGCATCGAAAAG 61.709 60.000 0.00 0.00 40.13 2.27
6506 7867 0.740868 CGGCCTCTGCATCGAAAAGA 60.741 55.000 0.00 0.00 40.13 2.52
6507 7868 1.673168 GGCCTCTGCATCGAAAAGAT 58.327 50.000 0.00 0.00 41.01 2.40
6517 7878 1.382522 TCGAAAAGATGCATGAGGCC 58.617 50.000 2.46 0.00 43.89 5.19
6518 7879 1.097232 CGAAAAGATGCATGAGGCCA 58.903 50.000 2.46 0.00 43.89 5.36
6519 7880 1.202222 CGAAAAGATGCATGAGGCCAC 60.202 52.381 2.46 0.00 43.89 5.01
6520 7881 2.097825 GAAAAGATGCATGAGGCCACT 58.902 47.619 2.46 0.00 43.89 4.00
6521 7882 2.226962 AAAGATGCATGAGGCCACTT 57.773 45.000 2.46 0.00 43.89 3.16
6522 7883 2.226962 AAGATGCATGAGGCCACTTT 57.773 45.000 2.46 0.00 43.89 2.66
6523 7884 3.370840 AAGATGCATGAGGCCACTTTA 57.629 42.857 2.46 0.00 43.89 1.85
6524 7885 3.589951 AGATGCATGAGGCCACTTTAT 57.410 42.857 2.46 0.00 43.89 1.40
6525 7886 3.907221 AGATGCATGAGGCCACTTTATT 58.093 40.909 2.46 0.00 43.89 1.40
6526 7887 5.052693 AGATGCATGAGGCCACTTTATTA 57.947 39.130 2.46 0.00 43.89 0.98
6527 7888 5.448654 AGATGCATGAGGCCACTTTATTAA 58.551 37.500 2.46 0.00 43.89 1.40
6528 7889 5.893255 AGATGCATGAGGCCACTTTATTAAA 59.107 36.000 2.46 0.00 43.89 1.52
6529 7890 6.552350 AGATGCATGAGGCCACTTTATTAAAT 59.448 34.615 2.46 0.00 43.89 1.40
6530 7891 6.147864 TGCATGAGGCCACTTTATTAAATC 57.852 37.500 5.01 0.00 43.89 2.17
6531 7892 5.655974 TGCATGAGGCCACTTTATTAAATCA 59.344 36.000 5.01 0.00 43.89 2.57
6532 7893 6.154192 TGCATGAGGCCACTTTATTAAATCAA 59.846 34.615 5.01 0.00 43.89 2.57
6533 7894 6.698766 GCATGAGGCCACTTTATTAAATCAAG 59.301 38.462 5.01 0.00 36.11 3.02
6534 7895 7.631377 GCATGAGGCCACTTTATTAAATCAAGT 60.631 37.037 5.01 0.00 36.11 3.16
6535 7896 7.391148 TGAGGCCACTTTATTAAATCAAGTC 57.609 36.000 5.01 0.00 0.00 3.01
6536 7897 7.175104 TGAGGCCACTTTATTAAATCAAGTCT 58.825 34.615 5.01 0.00 0.00 3.24
6537 7898 7.121168 TGAGGCCACTTTATTAAATCAAGTCTG 59.879 37.037 5.01 0.00 0.00 3.51
6538 7899 7.175104 AGGCCACTTTATTAAATCAAGTCTGA 58.825 34.615 5.01 0.00 35.56 3.27
6539 7900 7.121315 AGGCCACTTTATTAAATCAAGTCTGAC 59.879 37.037 5.01 0.00 33.30 3.51
6540 7901 7.094377 GGCCACTTTATTAAATCAAGTCTGACA 60.094 37.037 10.88 0.00 33.30 3.58
6541 7902 8.296713 GCCACTTTATTAAATCAAGTCTGACAA 58.703 33.333 10.88 0.00 33.30 3.18
6552 7913 9.736023 AAATCAAGTCTGACAAAACAAATAGTC 57.264 29.630 10.88 0.00 33.30 2.59
6553 7914 8.682936 ATCAAGTCTGACAAAACAAATAGTCT 57.317 30.769 10.88 0.00 33.30 3.24
6554 7915 7.919690 TCAAGTCTGACAAAACAAATAGTCTG 58.080 34.615 10.88 0.00 32.41 3.51
6555 7916 6.867662 AGTCTGACAAAACAAATAGTCTGG 57.132 37.500 10.88 0.00 32.80 3.86
6556 7917 6.357367 AGTCTGACAAAACAAATAGTCTGGT 58.643 36.000 10.88 0.00 32.80 4.00
6557 7918 6.483640 AGTCTGACAAAACAAATAGTCTGGTC 59.516 38.462 10.88 0.00 32.80 4.02
6558 7919 6.483640 GTCTGACAAAACAAATAGTCTGGTCT 59.516 38.462 2.24 0.00 32.80 3.85
6559 7920 6.483307 TCTGACAAAACAAATAGTCTGGTCTG 59.517 38.462 0.00 0.00 32.80 3.51
6560 7921 5.008613 TGACAAAACAAATAGTCTGGTCTGC 59.991 40.000 0.00 0.00 32.41 4.26
6561 7922 4.887071 ACAAAACAAATAGTCTGGTCTGCA 59.113 37.500 0.00 0.00 0.00 4.41
6562 7923 5.359576 ACAAAACAAATAGTCTGGTCTGCAA 59.640 36.000 0.00 0.00 0.00 4.08
6563 7924 6.127479 ACAAAACAAATAGTCTGGTCTGCAAA 60.127 34.615 0.00 0.00 0.00 3.68
6564 7925 6.655078 AAACAAATAGTCTGGTCTGCAAAT 57.345 33.333 0.00 0.00 0.00 2.32
6565 7926 6.655078 AACAAATAGTCTGGTCTGCAAATT 57.345 33.333 0.00 0.00 0.00 1.82
6566 7927 6.017400 ACAAATAGTCTGGTCTGCAAATTG 57.983 37.500 0.00 0.00 0.00 2.32
6567 7928 4.708726 AATAGTCTGGTCTGCAAATTGC 57.291 40.909 11.58 11.58 45.29 3.56
6580 7941 3.054878 GCAAATTGCAACTCACAGAAGG 58.945 45.455 13.73 0.00 44.26 3.46
6581 7942 3.243501 GCAAATTGCAACTCACAGAAGGA 60.244 43.478 13.73 0.00 44.26 3.36
6582 7943 4.543692 CAAATTGCAACTCACAGAAGGAG 58.456 43.478 0.00 0.00 38.36 3.69
6583 7944 1.597742 TTGCAACTCACAGAAGGAGC 58.402 50.000 0.00 0.00 35.79 4.70
6584 7945 0.469494 TGCAACTCACAGAAGGAGCA 59.531 50.000 0.00 0.00 35.79 4.26
6585 7946 1.134128 TGCAACTCACAGAAGGAGCAA 60.134 47.619 0.00 0.00 35.79 3.91
6586 7947 1.949525 GCAACTCACAGAAGGAGCAAA 59.050 47.619 0.00 0.00 35.79 3.68
6587 7948 2.031333 GCAACTCACAGAAGGAGCAAAG 60.031 50.000 0.00 0.00 35.79 2.77
6588 7949 3.470709 CAACTCACAGAAGGAGCAAAGA 58.529 45.455 0.00 0.00 35.79 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 8.814235 GCATGTCAAGAAAAATTATCTCATTGG 58.186 33.333 0.00 0.00 0.00 3.16
7 8 9.361315 TGCATGTCAAGAAAAATTATCTCATTG 57.639 29.630 0.00 0.00 0.00 2.82
18 19 9.932699 CAAAATGTTAATGCATGTCAAGAAAAA 57.067 25.926 0.00 0.00 0.00 1.94
19 20 9.107177 ACAAAATGTTAATGCATGTCAAGAAAA 57.893 25.926 0.00 0.00 0.00 2.29
20 21 8.659925 ACAAAATGTTAATGCATGTCAAGAAA 57.340 26.923 0.00 0.00 0.00 2.52
21 22 8.659925 AACAAAATGTTAATGCATGTCAAGAA 57.340 26.923 0.00 0.00 39.09 2.52
22 23 9.409312 CTAACAAAATGTTAATGCATGTCAAGA 57.591 29.630 0.00 0.00 41.70 3.02
23 24 9.195411 ACTAACAAAATGTTAATGCATGTCAAG 57.805 29.630 0.00 0.00 41.70 3.02
24 25 9.539825 AACTAACAAAATGTTAATGCATGTCAA 57.460 25.926 0.00 0.00 41.70 3.18
51 52 9.796120 TTTGTGTCAAATTTCGACTAAAGATTT 57.204 25.926 16.46 0.00 34.37 2.17
52 53 9.233232 GTTTGTGTCAAATTTCGACTAAAGATT 57.767 29.630 16.46 0.00 34.37 2.40
53 54 8.621286 AGTTTGTGTCAAATTTCGACTAAAGAT 58.379 29.630 16.46 9.79 34.37 2.40
54 55 7.981142 AGTTTGTGTCAAATTTCGACTAAAGA 58.019 30.769 16.46 0.00 34.37 2.52
55 56 9.155053 GTAGTTTGTGTCAAATTTCGACTAAAG 57.845 33.333 16.46 0.00 34.37 1.85
56 57 8.666573 TGTAGTTTGTGTCAAATTTCGACTAAA 58.333 29.630 16.46 14.59 34.37 1.85
57 58 8.199176 TGTAGTTTGTGTCAAATTTCGACTAA 57.801 30.769 16.46 11.31 34.37 2.24
58 59 7.773864 TGTAGTTTGTGTCAAATTTCGACTA 57.226 32.000 16.46 7.63 34.37 2.59
59 60 6.671614 TGTAGTTTGTGTCAAATTTCGACT 57.328 33.333 16.46 5.88 34.37 4.18
60 61 7.044314 CCTTTGTAGTTTGTGTCAAATTTCGAC 60.044 37.037 11.52 11.52 31.08 4.20
61 62 6.970043 CCTTTGTAGTTTGTGTCAAATTTCGA 59.030 34.615 0.00 0.00 31.08 3.71
62 63 6.198216 CCCTTTGTAGTTTGTGTCAAATTTCG 59.802 38.462 0.00 0.00 31.08 3.46
63 64 6.478673 CCCCTTTGTAGTTTGTGTCAAATTTC 59.521 38.462 0.00 0.00 31.08 2.17
64 65 6.155393 TCCCCTTTGTAGTTTGTGTCAAATTT 59.845 34.615 0.00 0.00 31.08 1.82
65 66 5.659079 TCCCCTTTGTAGTTTGTGTCAAATT 59.341 36.000 0.00 0.00 31.08 1.82
66 67 5.068591 GTCCCCTTTGTAGTTTGTGTCAAAT 59.931 40.000 0.00 0.00 31.08 2.32
67 68 4.399934 GTCCCCTTTGTAGTTTGTGTCAAA 59.600 41.667 0.00 0.00 0.00 2.69
68 69 3.949113 GTCCCCTTTGTAGTTTGTGTCAA 59.051 43.478 0.00 0.00 0.00 3.18
69 70 3.547746 GTCCCCTTTGTAGTTTGTGTCA 58.452 45.455 0.00 0.00 0.00 3.58
70 71 2.882761 GGTCCCCTTTGTAGTTTGTGTC 59.117 50.000 0.00 0.00 0.00 3.67
71 72 2.512476 AGGTCCCCTTTGTAGTTTGTGT 59.488 45.455 0.00 0.00 0.00 3.72
72 73 3.223674 AGGTCCCCTTTGTAGTTTGTG 57.776 47.619 0.00 0.00 0.00 3.33
73 74 6.707273 TTATAGGTCCCCTTTGTAGTTTGT 57.293 37.500 0.00 0.00 34.61 2.83
74 75 6.376299 GGTTTATAGGTCCCCTTTGTAGTTTG 59.624 42.308 0.00 0.00 34.61 2.93
75 76 6.045813 TGGTTTATAGGTCCCCTTTGTAGTTT 59.954 38.462 0.00 0.00 34.61 2.66
76 77 5.552766 TGGTTTATAGGTCCCCTTTGTAGTT 59.447 40.000 0.00 0.00 34.61 2.24
77 78 5.102967 TGGTTTATAGGTCCCCTTTGTAGT 58.897 41.667 0.00 0.00 34.61 2.73
78 79 5.397559 CCTGGTTTATAGGTCCCCTTTGTAG 60.398 48.000 0.00 0.00 34.61 2.74
79 80 4.475747 CCTGGTTTATAGGTCCCCTTTGTA 59.524 45.833 0.00 0.00 34.61 2.41
80 81 3.268595 CCTGGTTTATAGGTCCCCTTTGT 59.731 47.826 0.00 0.00 34.61 2.83
81 82 3.526019 TCCTGGTTTATAGGTCCCCTTTG 59.474 47.826 0.00 0.00 36.67 2.77
82 83 3.526430 GTCCTGGTTTATAGGTCCCCTTT 59.474 47.826 0.00 0.00 36.67 3.11
83 84 3.120898 GTCCTGGTTTATAGGTCCCCTT 58.879 50.000 0.00 0.00 36.67 3.95
84 85 2.772930 GTCCTGGTTTATAGGTCCCCT 58.227 52.381 0.00 0.00 36.67 4.79
85 86 1.415289 CGTCCTGGTTTATAGGTCCCC 59.585 57.143 0.00 0.00 36.67 4.81
86 87 1.415289 CCGTCCTGGTTTATAGGTCCC 59.585 57.143 0.00 0.00 36.67 4.46
87 88 2.364647 CTCCGTCCTGGTTTATAGGTCC 59.635 54.545 0.00 0.00 39.52 4.46
88 89 2.364647 CCTCCGTCCTGGTTTATAGGTC 59.635 54.545 0.00 0.00 39.52 3.85
89 90 2.292719 ACCTCCGTCCTGGTTTATAGGT 60.293 50.000 0.00 0.00 35.62 3.08
90 91 2.395619 ACCTCCGTCCTGGTTTATAGG 58.604 52.381 0.00 0.00 39.52 2.57
91 92 4.213513 ACTACCTCCGTCCTGGTTTATAG 58.786 47.826 0.00 0.00 39.52 1.31
92 93 4.255510 ACTACCTCCGTCCTGGTTTATA 57.744 45.455 0.00 0.00 39.52 0.98
93 94 3.111741 ACTACCTCCGTCCTGGTTTAT 57.888 47.619 0.00 0.00 39.52 1.40
94 95 2.610438 ACTACCTCCGTCCTGGTTTA 57.390 50.000 0.00 0.00 39.52 2.01
95 96 2.174360 GTACTACCTCCGTCCTGGTTT 58.826 52.381 0.00 0.00 39.52 3.27
96 97 1.357079 AGTACTACCTCCGTCCTGGTT 59.643 52.381 0.00 0.00 39.52 3.67
97 98 0.998145 AGTACTACCTCCGTCCTGGT 59.002 55.000 0.00 0.00 39.52 4.00
98 99 2.437281 TCTAGTACTACCTCCGTCCTGG 59.563 54.545 0.00 0.00 40.09 4.45
99 100 3.834489 TCTAGTACTACCTCCGTCCTG 57.166 52.381 0.00 0.00 0.00 3.86
100 101 4.227073 AGTTTCTAGTACTACCTCCGTCCT 59.773 45.833 0.00 0.00 0.00 3.85
101 102 4.522114 AGTTTCTAGTACTACCTCCGTCC 58.478 47.826 0.00 0.00 0.00 4.79
102 103 5.757808 CCTAGTTTCTAGTACTACCTCCGTC 59.242 48.000 0.00 0.00 0.00 4.79
103 104 5.426833 TCCTAGTTTCTAGTACTACCTCCGT 59.573 44.000 0.00 0.00 0.00 4.69
104 105 5.923204 TCCTAGTTTCTAGTACTACCTCCG 58.077 45.833 0.00 0.00 0.00 4.63
105 106 8.586879 TTTTCCTAGTTTCTAGTACTACCTCC 57.413 38.462 0.00 0.00 0.00 4.30
106 107 8.685427 CCTTTTCCTAGTTTCTAGTACTACCTC 58.315 40.741 0.00 0.00 0.00 3.85
107 108 7.123997 GCCTTTTCCTAGTTTCTAGTACTACCT 59.876 40.741 0.00 0.00 0.00 3.08
108 109 7.264221 GCCTTTTCCTAGTTTCTAGTACTACC 58.736 42.308 0.00 0.00 0.00 3.18
109 110 7.264221 GGCCTTTTCCTAGTTTCTAGTACTAC 58.736 42.308 0.00 0.00 0.00 2.73
110 111 6.096001 CGGCCTTTTCCTAGTTTCTAGTACTA 59.904 42.308 0.00 1.89 0.00 1.82
111 112 5.105432 CGGCCTTTTCCTAGTTTCTAGTACT 60.105 44.000 0.00 0.00 0.00 2.73
112 113 5.107824 CGGCCTTTTCCTAGTTTCTAGTAC 58.892 45.833 0.00 0.00 0.00 2.73
113 114 4.774200 ACGGCCTTTTCCTAGTTTCTAGTA 59.226 41.667 0.00 0.00 0.00 1.82
114 115 3.581770 ACGGCCTTTTCCTAGTTTCTAGT 59.418 43.478 0.00 0.00 0.00 2.57
115 116 4.203654 ACGGCCTTTTCCTAGTTTCTAG 57.796 45.455 0.00 0.00 0.00 2.43
116 117 5.395990 CCATACGGCCTTTTCCTAGTTTCTA 60.396 44.000 0.00 0.00 0.00 2.10
117 118 4.514401 CATACGGCCTTTTCCTAGTTTCT 58.486 43.478 0.00 0.00 0.00 2.52
118 119 3.626217 CCATACGGCCTTTTCCTAGTTTC 59.374 47.826 0.00 0.00 0.00 2.78
119 120 3.264964 TCCATACGGCCTTTTCCTAGTTT 59.735 43.478 0.00 0.00 0.00 2.66
120 121 2.841881 TCCATACGGCCTTTTCCTAGTT 59.158 45.455 0.00 0.00 0.00 2.24
121 122 2.474112 TCCATACGGCCTTTTCCTAGT 58.526 47.619 0.00 0.00 0.00 2.57
122 123 3.553828 TTCCATACGGCCTTTTCCTAG 57.446 47.619 0.00 0.00 0.00 3.02
123 124 3.613030 GTTTCCATACGGCCTTTTCCTA 58.387 45.455 0.00 0.00 0.00 2.94
124 125 2.443416 GTTTCCATACGGCCTTTTCCT 58.557 47.619 0.00 0.00 0.00 3.36
125 126 1.131693 CGTTTCCATACGGCCTTTTCC 59.868 52.381 0.00 0.00 37.86 3.13
126 127 2.537639 CGTTTCCATACGGCCTTTTC 57.462 50.000 0.00 0.00 37.86 2.29
250 251 5.300034 CACTATACAGTACATTACGGGGTGA 59.700 44.000 0.00 0.00 32.21 4.02
252 253 5.203528 ACACTATACAGTACATTACGGGGT 58.796 41.667 0.00 0.00 32.21 4.95
256 257 7.008901 CACCACAACACTATACAGTACATTACG 59.991 40.741 0.00 0.00 32.21 3.18
258 259 7.815549 CACACCACAACACTATACAGTACATTA 59.184 37.037 0.00 0.00 32.21 1.90
336 664 2.966309 GAAAACGACCGGCAGGCAG 61.966 63.158 0.00 0.00 42.76 4.85
337 665 2.975799 GAAAACGACCGGCAGGCA 60.976 61.111 0.00 0.00 42.76 4.75
338 666 4.084888 CGAAAACGACCGGCAGGC 62.085 66.667 0.00 0.00 42.76 4.85
339 667 4.084888 GCGAAAACGACCGGCAGG 62.085 66.667 0.00 0.00 45.13 4.85
404 743 2.124942 CCTCTTGCTCCTTCCGGC 60.125 66.667 0.00 0.00 0.00 6.13
435 793 2.588201 TACACATGCCCCACTCGCA 61.588 57.895 0.00 0.00 41.28 5.10
448 806 2.299867 GTTTTAGGGAGGACGGTACACA 59.700 50.000 0.00 0.00 0.00 3.72
484 869 1.429927 TTTCCTTTTCGTGCGTGCGA 61.430 50.000 0.00 0.00 39.28 5.10
493 1128 2.986479 CCCGCAAATTCTTTCCTTTTCG 59.014 45.455 0.00 0.00 0.00 3.46
523 1158 4.871933 TGCAAATCCTTTCCTTTTCCTC 57.128 40.909 0.00 0.00 0.00 3.71
549 1184 5.748630 GCAACTTCTTTCCTTTCGTTTTCAT 59.251 36.000 0.00 0.00 0.00 2.57
550 1185 5.099575 GCAACTTCTTTCCTTTCGTTTTCA 58.900 37.500 0.00 0.00 0.00 2.69
551 1186 4.204370 CGCAACTTCTTTCCTTTCGTTTTC 59.796 41.667 0.00 0.00 0.00 2.29
556 1191 1.871039 TCCGCAACTTCTTTCCTTTCG 59.129 47.619 0.00 0.00 0.00 3.46
557 1192 3.826466 CATCCGCAACTTCTTTCCTTTC 58.174 45.455 0.00 0.00 0.00 2.62
575 1210 7.814642 TCTCATTTCTTTCTTTCAGAAGCATC 58.185 34.615 0.00 0.00 35.37 3.91
578 1213 7.114670 GCTTTCTCATTTCTTTCTTTCAGAAGC 59.885 37.037 0.00 0.00 35.37 3.86
583 1218 5.530915 TCCGCTTTCTCATTTCTTTCTTTCA 59.469 36.000 0.00 0.00 0.00 2.69
592 1227 3.182182 GCCAATTCCGCTTTCTCATTTC 58.818 45.455 0.00 0.00 0.00 2.17
593 1228 2.562298 TGCCAATTCCGCTTTCTCATTT 59.438 40.909 0.00 0.00 0.00 2.32
595 1230 1.838112 TGCCAATTCCGCTTTCTCAT 58.162 45.000 0.00 0.00 0.00 2.90
596 1231 1.269448 GTTGCCAATTCCGCTTTCTCA 59.731 47.619 0.00 0.00 0.00 3.27
597 1232 1.402852 GGTTGCCAATTCCGCTTTCTC 60.403 52.381 0.00 0.00 0.00 2.87
598 1233 0.603065 GGTTGCCAATTCCGCTTTCT 59.397 50.000 0.00 0.00 0.00 2.52
599 1234 0.316841 TGGTTGCCAATTCCGCTTTC 59.683 50.000 0.00 0.00 0.00 2.62
600 1235 0.755686 TTGGTTGCCAATTCCGCTTT 59.244 45.000 0.00 0.00 38.75 3.51
601 1236 2.435418 TTGGTTGCCAATTCCGCTT 58.565 47.368 0.00 0.00 38.75 4.68
602 1237 4.189539 TTGGTTGCCAATTCCGCT 57.810 50.000 0.00 0.00 38.75 5.52
610 1245 4.608269 TGGAAGATCATTATTGGTTGCCA 58.392 39.130 0.00 0.00 0.00 4.92
611 1246 5.596836 TTGGAAGATCATTATTGGTTGCC 57.403 39.130 0.00 0.00 0.00 4.52
612 1247 5.812127 GGTTTGGAAGATCATTATTGGTTGC 59.188 40.000 0.00 0.00 0.00 4.17
613 1248 7.123247 AGAGGTTTGGAAGATCATTATTGGTTG 59.877 37.037 0.00 0.00 0.00 3.77
628 1263 1.705186 CCCTGGAGAAGAGGTTTGGAA 59.295 52.381 0.00 0.00 0.00 3.53
635 1270 2.285668 TGGCCCCTGGAGAAGAGG 60.286 66.667 0.00 0.00 0.00 3.69
637 1272 3.011517 GCTGGCCCCTGGAGAAGA 61.012 66.667 0.00 0.00 0.00 2.87
638 1273 4.120755 GGCTGGCCCCTGGAGAAG 62.121 72.222 0.00 0.00 0.00 2.85
659 1294 2.100631 CGCTCCCTTTACAGTGCCG 61.101 63.158 0.00 0.00 0.00 5.69
676 1329 1.091771 AATCACTGATTGGCGGCTCG 61.092 55.000 11.43 0.00 30.42 5.03
695 1348 0.393944 ACATCCGTCTCGTCTAGCCA 60.394 55.000 0.00 0.00 0.00 4.75
702 1355 0.168348 CTCGTTCACATCCGTCTCGT 59.832 55.000 0.00 0.00 0.00 4.18
703 1356 0.523546 CCTCGTTCACATCCGTCTCG 60.524 60.000 0.00 0.00 0.00 4.04
705 1358 0.526662 GACCTCGTTCACATCCGTCT 59.473 55.000 0.00 0.00 0.00 4.18
707 1360 0.526662 GAGACCTCGTTCACATCCGT 59.473 55.000 0.00 0.00 0.00 4.69
760 1435 2.213499 GCTGCCCATGTAGTCATGTAC 58.787 52.381 7.30 0.00 46.99 2.90
765 1440 0.909133 TCCTGCTGCCCATGTAGTCA 60.909 55.000 0.00 0.00 0.00 3.41
767 1442 1.604378 GTCCTGCTGCCCATGTAGT 59.396 57.895 0.00 0.00 0.00 2.73
768 1443 1.522355 CGTCCTGCTGCCCATGTAG 60.522 63.158 0.00 0.00 0.00 2.74
769 1444 2.584064 CGTCCTGCTGCCCATGTA 59.416 61.111 0.00 0.00 0.00 2.29
772 1447 4.349503 TTGCGTCCTGCTGCCCAT 62.350 61.111 0.00 0.00 46.63 4.00
780 1455 4.724697 CGTTGCGCTTGCGTCCTG 62.725 66.667 16.38 1.53 43.34 3.86
808 1483 1.305930 ATTTCGGCTGGTTTCTCGCC 61.306 55.000 0.00 0.00 40.40 5.54
821 1496 1.490693 CTCGTGCGGATGGATTTCGG 61.491 60.000 0.00 0.00 0.00 4.30
844 1520 1.063166 GCTTTATCGCTGTGCCTGC 59.937 57.895 0.00 0.00 0.00 4.85
955 1633 2.231380 GGCTGGGTTCCCTTCAGGA 61.231 63.158 9.43 0.00 45.68 3.86
956 1634 2.356667 GGCTGGGTTCCCTTCAGG 59.643 66.667 9.43 0.00 0.00 3.86
1215 1905 2.509336 ATGTTCTCCGCCGCGAAG 60.509 61.111 15.93 2.50 0.00 3.79
1362 2055 0.319727 TGTTGGAACGTACCGCGAAT 60.320 50.000 8.23 0.00 44.77 3.34
1423 2120 2.268280 CAGGCAGACAGAGGCAGG 59.732 66.667 0.00 0.00 0.00 4.85
1431 2128 0.535780 CAAACAGAGGCAGGCAGACA 60.536 55.000 0.00 0.00 0.00 3.41
1439 2136 2.553028 GGATTCCAGTCAAACAGAGGCA 60.553 50.000 0.00 0.00 0.00 4.75
1440 2137 2.087646 GGATTCCAGTCAAACAGAGGC 58.912 52.381 0.00 0.00 0.00 4.70
1441 2138 2.350522 CGGATTCCAGTCAAACAGAGG 58.649 52.381 3.09 0.00 0.00 3.69
1442 2139 1.734465 GCGGATTCCAGTCAAACAGAG 59.266 52.381 3.09 0.00 0.00 3.35
1443 2140 1.808411 GCGGATTCCAGTCAAACAGA 58.192 50.000 3.09 0.00 0.00 3.41
1444 2141 0.443869 CGCGGATTCCAGTCAAACAG 59.556 55.000 0.00 0.00 0.00 3.16
1445 2142 0.034198 TCGCGGATTCCAGTCAAACA 59.966 50.000 6.13 0.00 0.00 2.83
1446 2143 0.721718 CTCGCGGATTCCAGTCAAAC 59.278 55.000 6.13 0.00 0.00 2.93
1447 2144 1.019278 GCTCGCGGATTCCAGTCAAA 61.019 55.000 6.13 0.00 0.00 2.69
1448 2145 1.447838 GCTCGCGGATTCCAGTCAA 60.448 57.895 6.13 0.00 0.00 3.18
1449 2146 1.035385 TAGCTCGCGGATTCCAGTCA 61.035 55.000 6.13 0.00 0.00 3.41
1459 2156 0.452122 CCGTTGTTTTTAGCTCGCGG 60.452 55.000 6.13 0.00 0.00 6.46
1671 2376 1.520787 GGCGGTGTTGATACGGGAG 60.521 63.158 0.00 0.00 0.00 4.30
1672 2377 2.580276 GGCGGTGTTGATACGGGA 59.420 61.111 0.00 0.00 0.00 5.14
1706 2411 0.394192 TGCTCCGATCAATGGCTAGG 59.606 55.000 0.00 0.00 0.00 3.02
1717 2422 5.491982 AGTTCTTGAAGTAAATGCTCCGAT 58.508 37.500 0.00 0.00 0.00 4.18
1719 2424 4.201628 CGAGTTCTTGAAGTAAATGCTCCG 60.202 45.833 0.00 0.00 0.00 4.63
1785 2490 2.463553 CGCAGCATGTGTTTATGGAG 57.536 50.000 0.00 0.00 42.83 3.86
1948 2821 2.102109 TTTGTTGGGCATGCCAGCAG 62.102 55.000 36.56 0.00 37.98 4.24
1994 2867 4.084888 CGCGTTTGGGGAACTCGC 62.085 66.667 0.00 0.00 39.28 5.03
1996 2869 1.595929 TCACGCGTTTGGGGAACTC 60.596 57.895 10.22 0.00 36.06 3.01
2045 2921 3.272574 ACTGCACTGGATCCAATACAG 57.727 47.619 25.23 25.23 46.96 2.74
2129 3005 9.708092 GTCACTGAAGAACCTTAAATAGTTACT 57.292 33.333 0.00 0.00 0.00 2.24
2130 3006 9.485206 TGTCACTGAAGAACCTTAAATAGTTAC 57.515 33.333 0.00 0.00 0.00 2.50
2133 3009 7.736893 AGTGTCACTGAAGAACCTTAAATAGT 58.263 34.615 4.21 0.00 0.00 2.12
2798 3711 4.223032 AGGACCCTATATGCATTTAGGTCG 59.777 45.833 30.02 21.95 34.35 4.79
2936 3849 4.553323 CACTTCCAAGAGAGGCATTTTTG 58.447 43.478 0.00 0.00 0.00 2.44
2995 3913 5.123979 GTCTCACAACCTAAATGGAATCACC 59.876 44.000 0.00 0.00 39.71 4.02
3015 3933 4.002906 TCTATGTTTGGTGTGTGGTCTC 57.997 45.455 0.00 0.00 0.00 3.36
3016 3934 4.431416 TTCTATGTTTGGTGTGTGGTCT 57.569 40.909 0.00 0.00 0.00 3.85
3066 4093 7.721286 AGAGATTATTCTTAGTGGCGAATTG 57.279 36.000 0.00 0.00 32.53 2.32
3119 4146 5.624159 TCTCCAACTGAAGTGTGAATCAAT 58.376 37.500 0.00 0.00 0.00 2.57
3128 4155 7.264373 AGTAACAATTTCTCCAACTGAAGTG 57.736 36.000 0.00 0.00 0.00 3.16
3165 4325 3.131933 TGCAAGTGCTTTAGCCTTTCAAA 59.868 39.130 4.69 0.00 42.66 2.69
3219 4379 3.196901 ACCGGTAGAGAATTGTGCATACA 59.803 43.478 4.49 0.00 34.31 2.29
3239 4399 9.626045 CAGTAATTTTGTTCAAAGAGGATAACC 57.374 33.333 0.00 0.00 0.00 2.85
3271 4431 5.558818 GAGGATCACCATTCTGCAGATAAT 58.441 41.667 19.04 6.11 38.94 1.28
3457 4617 6.449635 ACAGATGTCACAAAGCAAGTAAAA 57.550 33.333 0.00 0.00 0.00 1.52
3536 4700 4.232221 TGTCGAAGTCGGTATTCTGTTTC 58.768 43.478 0.11 0.00 40.29 2.78
3537 4701 4.247267 TGTCGAAGTCGGTATTCTGTTT 57.753 40.909 0.11 0.00 40.29 2.83
3540 4704 4.028852 TCATGTCGAAGTCGGTATTCTG 57.971 45.455 0.11 0.00 40.29 3.02
3541 4705 4.713824 TTCATGTCGAAGTCGGTATTCT 57.286 40.909 0.11 0.00 40.29 2.40
3542 4706 4.209288 CCATTCATGTCGAAGTCGGTATTC 59.791 45.833 0.11 0.00 36.95 1.75
3543 4707 4.119862 CCATTCATGTCGAAGTCGGTATT 58.880 43.478 0.11 0.00 36.95 1.89
3545 4709 2.756207 TCCATTCATGTCGAAGTCGGTA 59.244 45.455 0.11 0.00 36.95 4.02
3546 4710 1.548719 TCCATTCATGTCGAAGTCGGT 59.451 47.619 0.11 0.00 36.95 4.69
3548 4712 3.865164 TCATTCCATTCATGTCGAAGTCG 59.135 43.478 0.00 0.00 36.95 4.18
3550 4714 5.760253 GGTATCATTCCATTCATGTCGAAGT 59.240 40.000 0.00 0.00 36.95 3.01
3559 4723 7.614974 TCTCAAATTGTGGTATCATTCCATTCA 59.385 33.333 0.00 0.00 37.30 2.57
3842 5017 8.738645 ACTCTTCGAGGAAAGCAAATTAATAT 57.261 30.769 0.00 0.00 33.35 1.28
3847 5022 4.214332 GTGACTCTTCGAGGAAAGCAAATT 59.786 41.667 0.00 0.00 33.35 1.82
3848 5023 3.748568 GTGACTCTTCGAGGAAAGCAAAT 59.251 43.478 0.00 0.00 33.35 2.32
3858 5033 2.971430 TTCGAGTGTGACTCTTCGAG 57.029 50.000 2.44 0.00 42.92 4.04
3859 5034 3.703286 TTTTCGAGTGTGACTCTTCGA 57.297 42.857 2.44 3.37 42.92 3.71
3860 5035 3.736252 ACATTTTCGAGTGTGACTCTTCG 59.264 43.478 2.44 0.00 42.92 3.79
3874 5050 5.745514 CCAGAGCTGAATATGACATTTTCG 58.254 41.667 12.22 8.99 0.00 3.46
3879 5055 3.474600 GTGCCAGAGCTGAATATGACAT 58.525 45.455 0.00 0.00 40.80 3.06
3894 5070 2.290641 GTCACTGTTACTTTGGTGCCAG 59.709 50.000 0.00 0.00 33.58 4.85
3905 5081 3.561725 AGAAAGCAAGCAGTCACTGTTAC 59.438 43.478 6.68 0.00 33.43 2.50
4045 5230 7.321153 GTTCTGTAGGATAAAGTGTAGCAAGA 58.679 38.462 0.00 0.00 0.00 3.02
4098 5283 6.742559 AAAATACATGGTAGGGTCGACTAT 57.257 37.500 16.46 6.90 0.00 2.12
4135 5320 0.321671 TCCTTCAGTGCAGCAGGTAC 59.678 55.000 0.00 0.00 0.00 3.34
4142 5327 3.243101 GCATCATTCATCCTTCAGTGCAG 60.243 47.826 0.00 0.00 0.00 4.41
4168 5353 2.352323 GGCTGAAAACCAACCCAATACG 60.352 50.000 0.00 0.00 0.00 3.06
4185 5370 1.151668 CAAACGAGAAGGTCAGGCTG 58.848 55.000 8.58 8.58 0.00 4.85
4194 5379 1.333791 GGCCGAACAACAAACGAGAAG 60.334 52.381 0.00 0.00 0.00 2.85
4199 5384 2.288458 TCTAAAGGCCGAACAACAAACG 59.712 45.455 0.00 0.00 0.00 3.60
4201 5386 6.207810 ACATAATCTAAAGGCCGAACAACAAA 59.792 34.615 0.00 0.00 0.00 2.83
4284 5469 7.013942 ACAATCATAGAATACCAGCTACGTGTA 59.986 37.037 0.00 0.00 0.00 2.90
4334 5519 1.212490 GCGCCTGCATTTGCTGTAA 59.788 52.632 0.00 0.00 42.66 2.41
4335 5520 1.675310 AGCGCCTGCATTTGCTGTA 60.675 52.632 2.29 0.00 46.23 2.74
4348 5533 4.154195 TCTCTAACAGAAAATTTCAGCGCC 59.846 41.667 2.29 0.00 0.00 6.53
4388 5573 9.523168 AATAATTAAGCTAACAAGTTACACCCA 57.477 29.630 0.00 0.00 0.00 4.51
4416 5601 5.423931 TCCATTGGTATGAAGTACTGCTACA 59.576 40.000 1.64 0.00 33.37 2.74
4706 5892 9.188588 TGAACAGAAAAGTACGTAGAATTACAG 57.811 33.333 0.00 0.00 0.00 2.74
4784 5970 2.039879 GGGACAGGATAGGTTGTTGTGT 59.960 50.000 0.00 0.00 0.00 3.72
4790 5976 3.519510 TGAGAAAGGGACAGGATAGGTTG 59.480 47.826 0.00 0.00 0.00 3.77
4799 5985 1.004044 ACAGCCATGAGAAAGGGACAG 59.996 52.381 0.00 0.00 0.00 3.51
4893 6079 1.992277 CAGGAGGTGGAGGTGGAGG 60.992 68.421 0.00 0.00 0.00 4.30
4894 6080 2.664081 GCAGGAGGTGGAGGTGGAG 61.664 68.421 0.00 0.00 0.00 3.86
4895 6081 2.607750 GCAGGAGGTGGAGGTGGA 60.608 66.667 0.00 0.00 0.00 4.02
4896 6082 2.608988 AGCAGGAGGTGGAGGTGG 60.609 66.667 0.00 0.00 0.00 4.61
4897 6083 2.664081 GGAGCAGGAGGTGGAGGTG 61.664 68.421 0.00 0.00 0.00 4.00
4955 6141 3.515502 CTGTCAGGTCCATCCTAGAACAA 59.484 47.826 0.00 0.00 46.24 2.83
4997 6183 3.466712 TCGTCTCTGTAATGTGTCGAC 57.533 47.619 9.11 9.11 0.00 4.20
5030 6216 3.742433 AATGCTCTGATCCTTACCTCG 57.258 47.619 0.00 0.00 0.00 4.63
5052 6238 4.811024 GCAGAATGAATAGACGTGGAATCA 59.189 41.667 0.00 0.00 39.69 2.57
5053 6239 4.811024 TGCAGAATGAATAGACGTGGAATC 59.189 41.667 0.00 0.00 39.69 2.52
5054 6240 4.769688 TGCAGAATGAATAGACGTGGAAT 58.230 39.130 0.00 0.00 39.69 3.01
5055 6241 4.183865 CTGCAGAATGAATAGACGTGGAA 58.816 43.478 8.42 0.00 39.69 3.53
5056 6242 3.195610 ACTGCAGAATGAATAGACGTGGA 59.804 43.478 23.35 0.00 39.69 4.02
5057 6243 3.308053 CACTGCAGAATGAATAGACGTGG 59.692 47.826 23.35 0.00 39.69 4.94
5058 6244 3.242220 GCACTGCAGAATGAATAGACGTG 60.242 47.826 23.35 5.05 39.69 4.49
5059 6245 2.932614 GCACTGCAGAATGAATAGACGT 59.067 45.455 23.35 0.00 39.69 4.34
5060 6246 2.931969 TGCACTGCAGAATGAATAGACG 59.068 45.455 23.35 0.00 39.69 4.18
5088 6274 6.015350 GGATAAAGTGATCAGTTCCTCCGATA 60.015 42.308 16.06 3.94 0.00 2.92
5090 6276 4.099573 GGATAAAGTGATCAGTTCCTCCGA 59.900 45.833 16.06 0.00 0.00 4.55
5184 6370 1.136305 TCACGAAAAGCTAGATCCCCG 59.864 52.381 0.00 0.00 0.00 5.73
5263 6449 9.933723 CTTTTGAACATTAAAAGGATTCCTCAT 57.066 29.630 5.48 0.52 39.99 2.90
5264 6450 9.142014 TCTTTTGAACATTAAAAGGATTCCTCA 57.858 29.630 5.48 0.00 42.51 3.86
5277 6463 9.679661 TGGTTCTAGCATATCTTTTGAACATTA 57.320 29.630 0.00 0.00 33.79 1.90
5288 6568 7.497249 GTGAATCAACTTGGTTCTAGCATATCT 59.503 37.037 14.52 0.00 38.29 1.98
5289 6569 7.497249 AGTGAATCAACTTGGTTCTAGCATATC 59.503 37.037 14.52 0.00 38.29 1.63
5295 6575 5.799213 AGGAGTGAATCAACTTGGTTCTAG 58.201 41.667 14.52 0.00 38.29 2.43
5301 6581 4.401925 AGGAAAGGAGTGAATCAACTTGG 58.598 43.478 0.00 0.00 0.00 3.61
5306 6586 3.657727 AGGGAAGGAAAGGAGTGAATCAA 59.342 43.478 0.00 0.00 0.00 2.57
5310 6590 3.436470 CCAAAGGGAAGGAAAGGAGTGAA 60.436 47.826 0.00 0.00 35.59 3.18
5311 6591 2.108250 CCAAAGGGAAGGAAAGGAGTGA 59.892 50.000 0.00 0.00 35.59 3.41
5313 6593 2.980246 CCAAAGGGAAGGAAAGGAGT 57.020 50.000 0.00 0.00 35.59 3.85
5326 6606 0.465287 AACAAACTGCAGCCCAAAGG 59.535 50.000 15.27 0.00 0.00 3.11
5327 6607 1.136695 TCAACAAACTGCAGCCCAAAG 59.863 47.619 15.27 0.09 0.00 2.77
5328 6608 1.189752 TCAACAAACTGCAGCCCAAA 58.810 45.000 15.27 0.00 0.00 3.28
5332 6612 1.603678 CCACATCAACAAACTGCAGCC 60.604 52.381 15.27 0.00 0.00 4.85
5333 6613 1.603678 CCCACATCAACAAACTGCAGC 60.604 52.381 15.27 0.00 0.00 5.25
5334 6614 1.603678 GCCCACATCAACAAACTGCAG 60.604 52.381 13.48 13.48 0.00 4.41
5453 6733 3.315949 GGCCAGTCGGGGTACACA 61.316 66.667 0.00 0.00 37.04 3.72
5513 6793 3.092192 CTTGGCGTCGCTCTGCATG 62.092 63.158 18.11 5.05 0.00 4.06
5705 6989 3.583526 AGTTTCTCCCTAACTCAACCTCC 59.416 47.826 0.00 0.00 30.20 4.30
5735 7019 0.456312 CACGACTCTACGGCACTTCC 60.456 60.000 0.00 0.00 37.61 3.46
5829 7118 4.199310 TCCTTGCACTATGCCTGATTAAC 58.801 43.478 0.00 0.00 44.23 2.01
5830 7119 4.080356 ACTCCTTGCACTATGCCTGATTAA 60.080 41.667 0.00 0.00 44.23 1.40
5843 7136 1.944709 ACAACCGTAAACTCCTTGCAC 59.055 47.619 0.00 0.00 0.00 4.57
5921 7215 6.955963 CACTCATACATCTGCGTAAAGAAAAC 59.044 38.462 0.00 0.00 0.00 2.43
5922 7216 6.649141 ACACTCATACATCTGCGTAAAGAAAA 59.351 34.615 0.00 0.00 0.00 2.29
5923 7217 6.163476 ACACTCATACATCTGCGTAAAGAAA 58.837 36.000 0.00 0.00 0.00 2.52
5924 7218 5.720202 ACACTCATACATCTGCGTAAAGAA 58.280 37.500 0.00 0.00 0.00 2.52
5925 7219 5.324784 ACACTCATACATCTGCGTAAAGA 57.675 39.130 0.00 0.00 0.00 2.52
5931 7225 5.344066 AGTAGAAACACTCATACATCTGCG 58.656 41.667 0.00 0.00 0.00 5.18
5938 7232 7.259161 AGGAAATCGAGTAGAAACACTCATAC 58.741 38.462 4.33 0.00 44.34 2.39
5962 7256 8.697507 AGGCATCCCAATCTTAATTTACTTAG 57.302 34.615 0.00 0.00 0.00 2.18
5982 7276 6.552445 AAACTGATTGTAGAGTAGAGGCAT 57.448 37.500 0.00 0.00 0.00 4.40
5985 7279 6.528423 CGTCAAAACTGATTGTAGAGTAGAGG 59.472 42.308 0.00 0.00 0.00 3.69
6001 7295 5.295045 ACGAATTAAGTTCACCGTCAAAACT 59.705 36.000 0.00 0.00 36.60 2.66
6056 7361 3.255642 GGCTGCCTTCACAAATTCACTAA 59.744 43.478 12.43 0.00 0.00 2.24
6057 7362 2.819608 GGCTGCCTTCACAAATTCACTA 59.180 45.455 12.43 0.00 0.00 2.74
6064 7369 1.531365 CCTGGGCTGCCTTCACAAA 60.531 57.895 19.68 0.00 0.00 2.83
6132 7443 6.024049 GCAATTATCTGTTTCACTGTGCTAC 58.976 40.000 2.12 4.21 0.00 3.58
6148 7459 2.783284 CGGTGAACGCAATGCAATTATC 59.217 45.455 5.91 0.00 31.22 1.75
6211 7529 0.108396 TGGCATGGATATGTCACGGG 59.892 55.000 0.00 0.00 43.59 5.28
6344 7705 1.735018 CATACGTCGCAAACCCATTGA 59.265 47.619 0.00 0.00 41.85 2.57
6363 7724 0.750911 TGTGTGCAATGTGGACTGCA 60.751 50.000 0.00 0.00 46.01 4.41
6364 7725 0.599558 ATGTGTGCAATGTGGACTGC 59.400 50.000 0.00 0.00 39.59 4.40
6404 7765 4.322801 GCCTATCTTATTCATACCGGCAGT 60.323 45.833 0.00 0.00 35.23 4.40
6405 7766 4.184629 GCCTATCTTATTCATACCGGCAG 58.815 47.826 0.00 0.00 35.23 4.85
6406 7767 3.368013 CGCCTATCTTATTCATACCGGCA 60.368 47.826 0.00 0.00 34.83 5.69
6407 7768 3.187700 CGCCTATCTTATTCATACCGGC 58.812 50.000 0.00 0.00 0.00 6.13
6408 7769 3.187700 GCGCCTATCTTATTCATACCGG 58.812 50.000 0.00 0.00 0.00 5.28
6409 7770 2.852413 CGCGCCTATCTTATTCATACCG 59.148 50.000 0.00 0.00 0.00 4.02
6410 7771 2.603560 GCGCGCCTATCTTATTCATACC 59.396 50.000 23.24 0.00 0.00 2.73
6411 7772 2.603560 GGCGCGCCTATCTTATTCATAC 59.396 50.000 41.71 10.16 0.00 2.39
6412 7773 2.232696 TGGCGCGCCTATCTTATTCATA 59.767 45.455 45.79 22.24 36.94 2.15
6413 7774 1.001974 TGGCGCGCCTATCTTATTCAT 59.998 47.619 45.79 0.00 36.94 2.57
6414 7775 0.391228 TGGCGCGCCTATCTTATTCA 59.609 50.000 45.79 23.01 36.94 2.57
6415 7776 1.394917 CATGGCGCGCCTATCTTATTC 59.605 52.381 45.79 19.89 36.94 1.75
6416 7777 1.442769 CATGGCGCGCCTATCTTATT 58.557 50.000 45.79 20.00 36.94 1.40
6417 7778 0.391661 CCATGGCGCGCCTATCTTAT 60.392 55.000 45.79 29.60 36.94 1.73
6418 7779 1.005037 CCATGGCGCGCCTATCTTA 60.005 57.895 45.79 28.70 36.94 2.10
6419 7780 2.281070 CCATGGCGCGCCTATCTT 60.281 61.111 45.79 24.76 36.94 2.40
6420 7781 4.320456 CCCATGGCGCGCCTATCT 62.320 66.667 45.79 27.05 36.94 1.98
6421 7782 4.314440 TCCCATGGCGCGCCTATC 62.314 66.667 45.79 24.10 36.94 2.08
6422 7783 4.626081 GTCCCATGGCGCGCCTAT 62.626 66.667 45.79 33.87 36.94 2.57
6427 7788 2.755542 CTAGCTAGTCCCATGGCGCG 62.756 65.000 12.92 0.00 0.00 6.86
6428 7789 1.005630 CTAGCTAGTCCCATGGCGC 60.006 63.158 12.92 0.00 0.00 6.53
6429 7790 0.827925 TCCTAGCTAGTCCCATGGCG 60.828 60.000 19.31 0.00 0.00 5.69
6430 7791 1.650528 ATCCTAGCTAGTCCCATGGC 58.349 55.000 19.31 0.00 0.00 4.40
6431 7792 4.713792 AAAATCCTAGCTAGTCCCATGG 57.286 45.455 19.31 4.14 0.00 3.66
6432 7793 6.426646 AGTAAAATCCTAGCTAGTCCCATG 57.573 41.667 19.31 3.20 0.00 3.66
6433 7794 7.453141 AAAGTAAAATCCTAGCTAGTCCCAT 57.547 36.000 19.31 5.56 0.00 4.00
6434 7795 6.886178 AAAGTAAAATCCTAGCTAGTCCCA 57.114 37.500 19.31 1.02 0.00 4.37
6435 7796 9.848710 AAATAAAGTAAAATCCTAGCTAGTCCC 57.151 33.333 19.31 0.68 0.00 4.46
6475 7836 1.051556 AGAGGCCGGGAGAAATCCTC 61.052 60.000 12.64 12.64 42.68 3.71
6476 7837 1.003573 AGAGGCCGGGAGAAATCCT 59.996 57.895 2.18 0.00 0.00 3.24
6477 7838 1.147153 CAGAGGCCGGGAGAAATCC 59.853 63.158 2.18 0.00 0.00 3.01
6478 7839 1.524849 GCAGAGGCCGGGAGAAATC 60.525 63.158 2.18 0.00 0.00 2.17
6479 7840 1.639635 ATGCAGAGGCCGGGAGAAAT 61.640 55.000 2.18 0.00 40.13 2.17
6480 7841 2.257409 GATGCAGAGGCCGGGAGAAA 62.257 60.000 2.18 0.00 40.13 2.52
6481 7842 2.688666 ATGCAGAGGCCGGGAGAA 60.689 61.111 2.18 0.00 40.13 2.87
6482 7843 3.157252 GATGCAGAGGCCGGGAGA 61.157 66.667 2.18 0.00 40.13 3.71
6483 7844 4.598894 CGATGCAGAGGCCGGGAG 62.599 72.222 2.18 0.00 40.13 4.30
6485 7846 3.680620 TTTCGATGCAGAGGCCGGG 62.681 63.158 2.18 0.00 40.13 5.73
6486 7847 1.709147 CTTTTCGATGCAGAGGCCGG 61.709 60.000 0.00 0.00 40.13 6.13
6487 7848 0.740868 TCTTTTCGATGCAGAGGCCG 60.741 55.000 0.00 0.00 40.13 6.13
6488 7849 1.332997 CATCTTTTCGATGCAGAGGCC 59.667 52.381 0.00 0.00 42.75 5.19
6489 7850 2.752144 CATCTTTTCGATGCAGAGGC 57.248 50.000 0.00 0.00 42.75 4.70
6497 7858 1.952296 GGCCTCATGCATCTTTTCGAT 59.048 47.619 0.00 0.00 43.89 3.59
6498 7859 1.339920 TGGCCTCATGCATCTTTTCGA 60.340 47.619 3.32 0.00 43.89 3.71
6499 7860 1.097232 TGGCCTCATGCATCTTTTCG 58.903 50.000 3.32 0.00 43.89 3.46
6500 7861 2.097825 AGTGGCCTCATGCATCTTTTC 58.902 47.619 3.32 0.00 43.89 2.29
6501 7862 2.226962 AGTGGCCTCATGCATCTTTT 57.773 45.000 3.32 0.00 43.89 2.27
6502 7863 2.226962 AAGTGGCCTCATGCATCTTT 57.773 45.000 3.32 0.00 43.89 2.52
6503 7864 2.226962 AAAGTGGCCTCATGCATCTT 57.773 45.000 3.32 0.00 43.89 2.40
6504 7865 3.589951 ATAAAGTGGCCTCATGCATCT 57.410 42.857 3.32 0.00 43.89 2.90
6505 7866 5.772825 TTAATAAAGTGGCCTCATGCATC 57.227 39.130 3.32 0.00 43.89 3.91
6506 7867 6.324512 TGATTTAATAAAGTGGCCTCATGCAT 59.675 34.615 3.32 0.00 43.89 3.96
6507 7868 5.655974 TGATTTAATAAAGTGGCCTCATGCA 59.344 36.000 3.32 0.00 43.89 3.96
6508 7869 6.147864 TGATTTAATAAAGTGGCCTCATGC 57.852 37.500 3.32 0.00 40.16 4.06
6509 7870 7.775120 ACTTGATTTAATAAAGTGGCCTCATG 58.225 34.615 6.88 0.00 32.64 3.07
6510 7871 7.836183 AGACTTGATTTAATAAAGTGGCCTCAT 59.164 33.333 12.09 0.00 34.05 2.90
6511 7872 7.121168 CAGACTTGATTTAATAAAGTGGCCTCA 59.879 37.037 12.09 0.00 34.05 3.86
6512 7873 7.336931 TCAGACTTGATTTAATAAAGTGGCCTC 59.663 37.037 12.09 0.00 34.05 4.70
6513 7874 7.121315 GTCAGACTTGATTTAATAAAGTGGCCT 59.879 37.037 12.09 1.49 34.05 5.19
6514 7875 7.094377 TGTCAGACTTGATTTAATAAAGTGGCC 60.094 37.037 12.09 0.00 34.05 5.36
6515 7876 7.816640 TGTCAGACTTGATTTAATAAAGTGGC 58.183 34.615 12.09 2.06 34.05 5.01
6526 7887 9.736023 GACTATTTGTTTTGTCAGACTTGATTT 57.264 29.630 1.31 0.00 35.39 2.17
6527 7888 9.125026 AGACTATTTGTTTTGTCAGACTTGATT 57.875 29.630 1.31 0.00 35.39 2.57
6528 7889 8.562892 CAGACTATTTGTTTTGTCAGACTTGAT 58.437 33.333 1.31 0.00 35.39 2.57
6529 7890 7.012327 CCAGACTATTTGTTTTGTCAGACTTGA 59.988 37.037 1.31 0.00 32.41 3.02
6530 7891 7.134815 CCAGACTATTTGTTTTGTCAGACTTG 58.865 38.462 1.31 0.00 32.41 3.16
6531 7892 6.828785 ACCAGACTATTTGTTTTGTCAGACTT 59.171 34.615 1.31 0.00 32.41 3.01
6532 7893 6.357367 ACCAGACTATTTGTTTTGTCAGACT 58.643 36.000 1.31 0.00 32.41 3.24
6533 7894 6.483640 AGACCAGACTATTTGTTTTGTCAGAC 59.516 38.462 0.00 0.00 32.41 3.51
6534 7895 6.483307 CAGACCAGACTATTTGTTTTGTCAGA 59.517 38.462 0.00 0.00 32.41 3.27
6535 7896 6.662616 CAGACCAGACTATTTGTTTTGTCAG 58.337 40.000 0.00 0.00 32.41 3.51
6536 7897 5.008613 GCAGACCAGACTATTTGTTTTGTCA 59.991 40.000 0.00 0.00 32.41 3.58
6537 7898 5.008613 TGCAGACCAGACTATTTGTTTTGTC 59.991 40.000 0.00 0.00 0.00 3.18
6538 7899 4.887071 TGCAGACCAGACTATTTGTTTTGT 59.113 37.500 0.00 0.00 0.00 2.83
6539 7900 5.437289 TGCAGACCAGACTATTTGTTTTG 57.563 39.130 0.00 0.00 0.00 2.44
6540 7901 6.463995 TTTGCAGACCAGACTATTTGTTTT 57.536 33.333 0.00 0.00 0.00 2.43
6541 7902 6.655078 ATTTGCAGACCAGACTATTTGTTT 57.345 33.333 0.00 0.00 0.00 2.83
6542 7903 6.449698 CAATTTGCAGACCAGACTATTTGTT 58.550 36.000 0.00 0.00 0.00 2.83
6543 7904 5.565439 GCAATTTGCAGACCAGACTATTTGT 60.565 40.000 16.35 0.00 44.26 2.83
6544 7905 4.860907 GCAATTTGCAGACCAGACTATTTG 59.139 41.667 16.35 0.00 44.26 2.32
6545 7906 5.064441 GCAATTTGCAGACCAGACTATTT 57.936 39.130 16.35 0.00 44.26 1.40
6546 7907 4.708726 GCAATTTGCAGACCAGACTATT 57.291 40.909 16.35 0.00 44.26 1.73
6559 7920 3.054878 CCTTCTGTGAGTTGCAATTTGC 58.945 45.455 14.49 14.49 45.29 3.68
6560 7921 4.543692 CTCCTTCTGTGAGTTGCAATTTG 58.456 43.478 0.59 0.00 0.00 2.32
6561 7922 3.005155 GCTCCTTCTGTGAGTTGCAATTT 59.995 43.478 0.59 0.00 32.31 1.82
6562 7923 2.555757 GCTCCTTCTGTGAGTTGCAATT 59.444 45.455 0.59 0.00 32.31 2.32
6563 7924 2.157738 GCTCCTTCTGTGAGTTGCAAT 58.842 47.619 0.59 0.00 32.31 3.56
6564 7925 1.134128 TGCTCCTTCTGTGAGTTGCAA 60.134 47.619 0.00 0.00 32.31 4.08
6565 7926 0.469494 TGCTCCTTCTGTGAGTTGCA 59.531 50.000 0.00 0.00 32.31 4.08
6566 7927 1.597742 TTGCTCCTTCTGTGAGTTGC 58.402 50.000 0.00 0.00 32.31 4.17
6567 7928 3.470709 TCTTTGCTCCTTCTGTGAGTTG 58.529 45.455 0.00 0.00 32.31 3.16
6568 7929 3.845781 TCTTTGCTCCTTCTGTGAGTT 57.154 42.857 0.00 0.00 32.31 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.