Multiple sequence alignment - TraesCS4B01G324800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G324800 chr4B 100.000 2368 0 0 1 2368 615771879 615774246 0.000000e+00 4373.0
1 TraesCS4B01G324800 chr4D 93.324 1408 69 14 969 2368 484268473 484269863 0.000000e+00 2056.0
2 TraesCS4B01G324800 chr4D 91.415 629 35 8 1 624 484267161 484267775 0.000000e+00 845.0
3 TraesCS4B01G324800 chr4D 94.915 295 9 4 686 976 484268022 484268314 7.710000e-125 457.0
4 TraesCS4B01G324800 chr4D 100.000 30 0 0 640 669 484267996 484268025 3.290000e-04 56.5
5 TraesCS4B01G324800 chr5A 91.170 1393 74 35 999 2366 664532366 664533734 0.000000e+00 1845.0
6 TraesCS4B01G324800 chr6D 83.940 604 75 14 41 639 69835957 69836543 2.060000e-155 558.0
7 TraesCS4B01G324800 chr3D 86.170 94 12 1 30 123 528191766 528191674 1.500000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G324800 chr4B 615771879 615774246 2367 False 4373.000 4373 100.0000 1 2368 1 chr4B.!!$F1 2367
1 TraesCS4B01G324800 chr4D 484267161 484269863 2702 False 853.625 2056 94.9135 1 2368 4 chr4D.!!$F1 2367
2 TraesCS4B01G324800 chr5A 664532366 664533734 1368 False 1845.000 1845 91.1700 999 2366 1 chr5A.!!$F1 1367
3 TraesCS4B01G324800 chr6D 69835957 69836543 586 False 558.000 558 83.9400 41 639 1 chr6D.!!$F1 598

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
588 595 0.105593 ATGTGATGCCGTGCTCCTAG 59.894 55.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1437 1838 0.036105 TGCCATGAGTACACTGGCTG 60.036 55.0 24.73 5.7 43.8 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.449018 GGAGCAGTCTGGTGATAAAGAGA 59.551 47.826 9.79 0.00 0.00 3.10
29 30 5.083533 AGCAGTCTGGTGATAAAGAGAAG 57.916 43.478 3.14 0.00 0.00 2.85
31 32 5.105392 AGCAGTCTGGTGATAAAGAGAAGAG 60.105 44.000 3.14 0.00 0.00 2.85
33 34 5.420421 CAGTCTGGTGATAAAGAGAAGAGGA 59.580 44.000 0.00 0.00 0.00 3.71
34 35 5.420739 AGTCTGGTGATAAAGAGAAGAGGAC 59.579 44.000 0.00 0.00 0.00 3.85
35 36 4.399618 TCTGGTGATAAAGAGAAGAGGACG 59.600 45.833 0.00 0.00 0.00 4.79
36 37 4.087182 TGGTGATAAAGAGAAGAGGACGT 58.913 43.478 0.00 0.00 0.00 4.34
37 38 4.082190 TGGTGATAAAGAGAAGAGGACGTG 60.082 45.833 0.00 0.00 0.00 4.49
38 39 3.860536 GTGATAAAGAGAAGAGGACGTGC 59.139 47.826 0.00 0.00 0.00 5.34
51 52 2.236146 AGGACGTGCCATTAGACATGAA 59.764 45.455 2.38 0.00 40.02 2.57
85 86 8.687824 AAATTTATACAATCACTTCCGCTTTG 57.312 30.769 0.00 0.00 0.00 2.77
235 238 6.363577 TCAAGTTGTTGAAACATGAGAGAC 57.636 37.500 0.00 0.00 39.85 3.36
269 272 7.361894 TGTATGATGATAAATTTGCGATGTGG 58.638 34.615 0.00 0.00 0.00 4.17
313 316 9.612620 ATCGTTCTTTGATTTATCTGTTTTGTC 57.387 29.630 0.00 0.00 0.00 3.18
335 338 5.575606 GTCAAATCTCATGTGCCTGATTTTG 59.424 40.000 0.00 0.00 37.12 2.44
345 349 3.932089 GTGCCTGATTTTGTTGTTGTTGT 59.068 39.130 0.00 0.00 0.00 3.32
350 354 5.636965 CCTGATTTTGTTGTTGTTGTGTCAA 59.363 36.000 0.00 0.00 0.00 3.18
483 490 2.683933 GGGGAGGTTGAGCGGAGA 60.684 66.667 0.00 0.00 0.00 3.71
496 503 0.174162 GCGGAGAGCGGTTAAACCTA 59.826 55.000 0.00 0.00 35.66 3.08
530 537 0.970937 AAGGAGGAGGAATCGTCGCA 60.971 55.000 0.00 0.00 0.00 5.10
540 547 2.010582 AATCGTCGCAGGAGAGGAGC 62.011 60.000 2.25 0.00 38.25 4.70
556 563 0.398318 GAGCAAGAAGGTGTGGGAGT 59.602 55.000 0.00 0.00 0.00 3.85
575 582 5.882557 GGGAGTAACAAGATGAACATGTGAT 59.117 40.000 0.00 0.00 30.63 3.06
577 584 6.187125 AGTAACAAGATGAACATGTGATGC 57.813 37.500 0.00 0.00 30.63 3.91
588 595 0.105593 ATGTGATGCCGTGCTCCTAG 59.894 55.000 0.00 0.00 0.00 3.02
617 625 5.537295 TGGATATTGATCTGATGGCCAAAAG 59.463 40.000 10.96 11.01 32.15 2.27
624 632 6.064060 TGATCTGATGGCCAAAAGTATAAGG 58.936 40.000 10.96 0.00 0.00 2.69
705 918 1.450312 GCATGGACCTGACGGGAAG 60.450 63.158 7.51 0.00 38.76 3.46
708 921 2.047179 GGACCTGACGGGAAGTGC 60.047 66.667 7.51 0.00 38.76 4.40
713 926 1.164041 CCTGACGGGAAGTGCGTTTT 61.164 55.000 0.00 0.00 37.23 2.43
748 961 1.033574 GTGCTATCGGGACTGCTACT 58.966 55.000 0.00 0.00 33.31 2.57
752 965 4.095185 GTGCTATCGGGACTGCTACTATAG 59.905 50.000 0.00 0.00 33.31 1.31
902 1115 0.725117 CTTAAACGGCCATCGACCAC 59.275 55.000 2.24 0.00 42.43 4.16
903 1116 0.674269 TTAAACGGCCATCGACCACC 60.674 55.000 2.24 0.00 42.43 4.61
904 1117 1.546589 TAAACGGCCATCGACCACCT 61.547 55.000 2.24 0.00 42.43 4.00
905 1118 3.605749 AACGGCCATCGACCACCTG 62.606 63.158 2.24 0.00 42.43 4.00
907 1120 4.101448 GGCCATCGACCACCTGCT 62.101 66.667 0.00 0.00 0.00 4.24
957 1173 5.183140 GTCTGCTAGAGATCCTCCTGATAAC 59.817 48.000 0.00 0.00 32.41 1.89
959 1175 3.442273 GCTAGAGATCCTCCTGATAACCG 59.558 52.174 0.00 0.00 32.41 4.44
986 1368 3.655810 CTCGTCCCTCCAGCACAGC 62.656 68.421 0.00 0.00 0.00 4.40
987 1369 3.699894 CGTCCCTCCAGCACAGCT 61.700 66.667 0.00 0.00 40.77 4.24
988 1370 2.753029 GTCCCTCCAGCACAGCTT 59.247 61.111 0.00 0.00 36.40 3.74
989 1371 1.376553 GTCCCTCCAGCACAGCTTC 60.377 63.158 0.00 0.00 36.40 3.86
990 1372 2.045536 CCCTCCAGCACAGCTTCC 60.046 66.667 0.00 0.00 36.40 3.46
1110 1502 1.374343 TTACTCGATCCAGCGTCGCT 61.374 55.000 15.47 15.47 40.77 4.93
1124 1516 1.546834 GTCGCTACGTGATGTTCCTC 58.453 55.000 0.00 0.00 0.00 3.71
1125 1517 0.454600 TCGCTACGTGATGTTCCTCC 59.545 55.000 0.00 0.00 0.00 4.30
1130 1522 0.036952 ACGTGATGTTCCTCCTGCTG 60.037 55.000 0.00 0.00 0.00 4.41
1146 1539 2.663602 CTGCTGAATCTGACGTGTGTAC 59.336 50.000 0.00 0.00 0.00 2.90
1147 1540 2.035321 TGCTGAATCTGACGTGTGTACA 59.965 45.455 0.00 0.00 0.00 2.90
1150 1543 2.993220 TGAATCTGACGTGTGTACATGC 59.007 45.455 0.00 0.00 36.36 4.06
1155 1548 2.369629 ACGTGTGTACATGCGCGTC 61.370 57.895 16.55 0.00 46.82 5.19
1159 1552 0.456142 TGTGTACATGCGCGTCTCTC 60.456 55.000 8.43 0.00 0.00 3.20
1160 1553 0.179161 GTGTACATGCGCGTCTCTCT 60.179 55.000 8.43 0.00 0.00 3.10
1172 1570 0.398318 GTCTCTCTTTGGGCAGGTGT 59.602 55.000 0.00 0.00 0.00 4.16
1379 1780 1.889105 CGCCTGATCAACCCATCCG 60.889 63.158 0.00 0.00 0.00 4.18
1380 1781 1.526887 GCCTGATCAACCCATCCGA 59.473 57.895 0.00 0.00 0.00 4.55
1382 1783 0.833287 CCTGATCAACCCATCCGACT 59.167 55.000 0.00 0.00 0.00 4.18
1383 1784 2.039418 CCTGATCAACCCATCCGACTA 58.961 52.381 0.00 0.00 0.00 2.59
1384 1785 2.036475 CCTGATCAACCCATCCGACTAG 59.964 54.545 0.00 0.00 0.00 2.57
1385 1786 2.695666 CTGATCAACCCATCCGACTAGT 59.304 50.000 0.00 0.00 0.00 2.57
1386 1787 2.693591 TGATCAACCCATCCGACTAGTC 59.306 50.000 13.18 13.18 0.00 2.59
1406 1807 0.385974 GTCGTAGCGTACCGTGTGTT 60.386 55.000 0.00 0.00 0.00 3.32
1421 1822 3.374745 GTGTGTTTGTTGCTTCAGATGG 58.625 45.455 0.00 0.00 0.00 3.51
1433 1834 3.677424 GCTTCAGATGGACTGTACCACTC 60.677 52.174 0.00 0.00 45.86 3.51
1434 1835 3.458044 TCAGATGGACTGTACCACTCT 57.542 47.619 0.00 0.00 45.86 3.24
1435 1836 3.092301 TCAGATGGACTGTACCACTCTG 58.908 50.000 18.65 18.65 45.86 3.35
1436 1837 2.828520 CAGATGGACTGTACCACTCTGT 59.171 50.000 17.70 0.00 43.03 3.41
1437 1838 3.093057 AGATGGACTGTACCACTCTGTC 58.907 50.000 0.00 0.00 43.03 3.51
1438 1839 2.375014 TGGACTGTACCACTCTGTCA 57.625 50.000 0.00 0.00 36.14 3.58
1439 1840 2.239400 TGGACTGTACCACTCTGTCAG 58.761 52.381 0.00 0.00 36.14 3.51
1445 1851 0.969149 TACCACTCTGTCAGCCAGTG 59.031 55.000 12.64 12.64 42.19 3.66
1569 1979 5.493133 AGCTTAGTTACATCTCTCACTCG 57.507 43.478 0.00 0.00 0.00 4.18
1570 1980 4.944930 AGCTTAGTTACATCTCTCACTCGT 59.055 41.667 0.00 0.00 0.00 4.18
1621 2031 0.385974 CGGCAAAAGCACTCCGAAAG 60.386 55.000 0.00 0.00 44.23 2.62
1641 2052 6.036083 CGAAAGAACACAAGAAGAACAGAGAA 59.964 38.462 0.00 0.00 0.00 2.87
1918 2329 2.741092 GGTTCCAGCCACGTCTGA 59.259 61.111 5.86 0.00 36.19 3.27
2081 2492 2.813908 GGTGGTCGACGTCATGGC 60.814 66.667 17.16 0.89 0.00 4.40
2084 2495 4.430765 GGTCGACGTCATGGCCGT 62.431 66.667 17.16 10.46 42.06 5.68
2089 2500 3.056458 ACGTCATGGCCGTCTGAA 58.944 55.556 0.00 0.00 31.97 3.02
2090 2501 1.369692 ACGTCATGGCCGTCTGAAA 59.630 52.632 0.00 0.00 31.97 2.69
2170 2581 1.816074 TGATCGGTTGGCAGGTTAAC 58.184 50.000 0.00 0.00 0.00 2.01
2253 2664 0.521735 GCTTTTGTCGGGTGATCCAC 59.478 55.000 0.00 0.00 34.36 4.02
2331 2742 3.054582 TCTTCAGCTTGATCTTGCTCCAT 60.055 43.478 9.48 0.00 37.44 3.41
2332 2743 2.915349 TCAGCTTGATCTTGCTCCATC 58.085 47.619 9.48 0.00 37.44 3.51
2339 2750 4.239428 TGATCTTGCTCCATCCATGAAA 57.761 40.909 0.00 0.00 0.00 2.69
2341 2752 5.205821 TGATCTTGCTCCATCCATGAAATT 58.794 37.500 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 1.899814 TGTCTAATGGCACGTCCTCTT 59.100 47.619 0.00 3.03 35.26 2.85
29 30 2.159099 TCATGTCTAATGGCACGTCCTC 60.159 50.000 0.00 0.00 35.26 3.71
31 32 2.309528 TCATGTCTAATGGCACGTCC 57.690 50.000 0.00 0.00 0.00 4.79
33 34 5.294306 CAGTTATTCATGTCTAATGGCACGT 59.706 40.000 0.00 0.00 0.00 4.49
34 35 5.523552 TCAGTTATTCATGTCTAATGGCACG 59.476 40.000 0.00 0.00 0.00 5.34
35 36 6.925610 TCAGTTATTCATGTCTAATGGCAC 57.074 37.500 0.00 0.00 0.00 5.01
36 37 9.625747 TTTATCAGTTATTCATGTCTAATGGCA 57.374 29.630 0.00 0.00 0.00 4.92
80 81 6.699575 ATATCCAATGTTCCTACACAAAGC 57.300 37.500 0.00 0.00 37.03 3.51
227 230 8.594550 TCATCATACATCAATCATGTCTCTCAT 58.405 33.333 0.00 0.00 42.62 2.90
228 231 7.959175 TCATCATACATCAATCATGTCTCTCA 58.041 34.615 0.00 0.00 42.62 3.27
305 308 4.341806 AGGCACATGAGATTTGACAAAACA 59.658 37.500 4.41 6.51 0.00 2.83
313 316 5.475719 ACAAAATCAGGCACATGAGATTTG 58.524 37.500 17.48 17.48 41.27 2.32
345 349 4.439968 TGCAATGCAAAAAGTGATTGACA 58.560 34.783 5.01 0.00 34.76 3.58
350 354 3.306502 CCTCCTGCAATGCAAAAAGTGAT 60.307 43.478 9.92 0.00 38.41 3.06
401 405 2.423898 CCGGCTCCCACTCGTACAT 61.424 63.158 0.00 0.00 0.00 2.29
474 481 0.389426 GTTTAACCGCTCTCCGCTCA 60.389 55.000 0.00 0.00 36.13 4.26
478 485 1.202382 CCTAGGTTTAACCGCTCTCCG 60.202 57.143 8.63 0.00 44.90 4.63
483 490 1.483827 GCCTACCTAGGTTTAACCGCT 59.516 52.381 22.11 0.00 44.90 5.52
491 498 1.688187 CCCGTGGCCTACCTAGGTT 60.688 63.158 22.11 4.29 45.42 3.50
496 503 2.687566 CTTCCCCGTGGCCTACCT 60.688 66.667 3.32 0.00 36.63 3.08
530 537 1.274712 CACCTTCTTGCTCCTCTCCT 58.725 55.000 0.00 0.00 0.00 3.69
540 547 3.485463 TGTTACTCCCACACCTTCTTG 57.515 47.619 0.00 0.00 0.00 3.02
556 563 4.094739 CGGCATCACATGTTCATCTTGTTA 59.905 41.667 0.00 0.00 33.13 2.41
577 584 2.509336 CAACGGCTAGGAGCACGG 60.509 66.667 11.96 0.00 44.75 4.94
588 595 3.438087 CCATCAGATCAATATCCAACGGC 59.562 47.826 0.00 0.00 31.98 5.68
617 625 0.031721 CTCGTGCCCGTCCCTTATAC 59.968 60.000 0.00 0.00 35.01 1.47
624 632 1.737008 GAACTTCTCGTGCCCGTCC 60.737 63.158 0.00 0.00 35.01 4.79
686 899 3.309436 TTCCCGTCAGGTCCATGCG 62.309 63.158 0.00 0.00 36.75 4.73
687 900 1.450312 CTTCCCGTCAGGTCCATGC 60.450 63.158 0.00 0.00 36.75 4.06
688 901 0.391661 CACTTCCCGTCAGGTCCATG 60.392 60.000 0.00 0.00 36.75 3.66
873 1086 0.525761 GCCGTTTAAGCTTGGCATGA 59.474 50.000 18.11 0.00 46.76 3.07
902 1115 2.818714 CAGAGCGGCAGAAGCAGG 60.819 66.667 1.45 0.00 44.61 4.85
903 1116 3.497932 GCAGAGCGGCAGAAGCAG 61.498 66.667 1.45 0.00 44.61 4.24
904 1117 3.830464 TTGCAGAGCGGCAGAAGCA 62.830 57.895 1.45 3.96 45.88 3.91
905 1118 3.036783 CTTGCAGAGCGGCAGAAGC 62.037 63.158 1.45 1.04 45.88 3.86
906 1119 2.396955 CCTTGCAGAGCGGCAGAAG 61.397 63.158 1.45 0.00 45.88 2.85
907 1120 2.359107 CCTTGCAGAGCGGCAGAA 60.359 61.111 1.45 0.00 45.88 3.02
986 1368 3.207669 GCATGGCTCGCTGGGAAG 61.208 66.667 0.00 0.00 0.00 3.46
987 1369 4.802051 GGCATGGCTCGCTGGGAA 62.802 66.667 12.86 0.00 0.00 3.97
1070 1452 4.787280 CTGGGGAGGACGAGGCCT 62.787 72.222 3.86 3.86 42.17 5.19
1073 1455 0.905337 AAGAACTGGGGAGGACGAGG 60.905 60.000 0.00 0.00 0.00 4.63
1075 1457 1.076677 AGTAAGAACTGGGGAGGACGA 59.923 52.381 0.00 0.00 33.57 4.20
1077 1459 1.477295 CGAGTAAGAACTGGGGAGGAC 59.523 57.143 0.00 0.00 35.56 3.85
1110 1502 1.204704 CAGCAGGAGGAACATCACGTA 59.795 52.381 0.00 0.00 0.00 3.57
1116 1508 2.842496 TCAGATTCAGCAGGAGGAACAT 59.158 45.455 0.00 0.00 0.00 2.71
1124 1516 1.073964 CACACGTCAGATTCAGCAGG 58.926 55.000 0.00 0.00 0.00 4.85
1125 1517 1.788258 ACACACGTCAGATTCAGCAG 58.212 50.000 0.00 0.00 0.00 4.24
1130 1522 2.028045 CGCATGTACACACGTCAGATTC 59.972 50.000 0.00 0.00 0.00 2.52
1146 1539 1.699656 CCCAAAGAGAGACGCGCATG 61.700 60.000 5.73 0.00 0.00 4.06
1147 1540 1.448540 CCCAAAGAGAGACGCGCAT 60.449 57.895 5.73 0.00 0.00 4.73
1150 1543 2.048222 TGCCCAAAGAGAGACGCG 60.048 61.111 3.53 3.53 0.00 6.01
1155 1548 1.239968 GCACACCTGCCCAAAGAGAG 61.240 60.000 0.00 0.00 37.45 3.20
1172 1570 2.665000 CTCTGCTTCTTCCCGGCA 59.335 61.111 0.00 0.00 34.66 5.69
1379 1780 1.256635 GGTACGCTACGACGACTAGTC 59.743 57.143 13.18 13.18 46.16 2.59
1380 1781 1.281899 GGTACGCTACGACGACTAGT 58.718 55.000 0.00 0.00 36.70 2.57
1406 1807 3.213206 ACAGTCCATCTGAAGCAACAA 57.787 42.857 1.79 0.00 46.27 2.83
1434 1835 1.276138 CCATGAGTACACTGGCTGACA 59.724 52.381 0.00 0.00 0.00 3.58
1435 1836 2.009042 GCCATGAGTACACTGGCTGAC 61.009 57.143 20.11 0.00 42.10 3.51
1436 1837 0.250234 GCCATGAGTACACTGGCTGA 59.750 55.000 20.11 0.00 42.10 4.26
1437 1838 0.036105 TGCCATGAGTACACTGGCTG 60.036 55.000 24.73 5.70 43.80 4.85
1438 1839 0.914644 ATGCCATGAGTACACTGGCT 59.085 50.000 24.73 13.42 43.80 4.75
1439 1840 1.019673 CATGCCATGAGTACACTGGC 58.980 55.000 20.41 20.41 43.76 4.85
1445 1851 6.939163 AGGATTCTTATTCATGCCATGAGTAC 59.061 38.462 9.19 0.00 40.94 2.73
1569 1979 3.733337 AGATGTTGGTGAGTGAGTGAAC 58.267 45.455 0.00 0.00 0.00 3.18
1570 1980 3.387699 TGAGATGTTGGTGAGTGAGTGAA 59.612 43.478 0.00 0.00 0.00 3.18
1621 2031 7.271438 GTGTTTTTCTCTGTTCTTCTTGTGTTC 59.729 37.037 0.00 0.00 0.00 3.18
1641 2052 4.468153 ACAGTACATTTTGGGGTGTGTTTT 59.532 37.500 0.00 0.00 0.00 2.43
1903 2314 1.300620 CGTTCAGACGTGGCTGGAA 60.301 57.895 2.28 0.00 44.08 3.53
1918 2329 2.990479 GGGCTGTGGAGATCCGTT 59.010 61.111 0.00 0.00 39.43 4.44
2084 2495 1.292223 CTCCGGAAGCCGTTTCAGA 59.708 57.895 5.23 0.00 46.80 3.27
2085 2496 1.741770 CCTCCGGAAGCCGTTTCAG 60.742 63.158 5.23 0.00 46.80 3.02
2086 2497 2.345991 CCTCCGGAAGCCGTTTCA 59.654 61.111 5.23 0.00 46.80 2.69
2088 2499 2.032071 CACCTCCGGAAGCCGTTT 59.968 61.111 5.23 0.00 46.80 3.60
2089 2500 4.016706 CCACCTCCGGAAGCCGTT 62.017 66.667 5.23 0.00 46.80 4.44
2170 2581 3.187699 CTCCGGCGATCACCTCTCG 62.188 68.421 9.30 0.00 39.11 4.04
2209 2620 2.672307 AGAGCCGTCCTCGTCGTT 60.672 61.111 0.00 0.00 45.54 3.85
2339 2750 4.647564 ATGTTGTCTCAGAACCAGGAAT 57.352 40.909 0.00 0.00 0.00 3.01
2341 2752 4.389374 GAAATGTTGTCTCAGAACCAGGA 58.611 43.478 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.