Multiple sequence alignment - TraesCS4B01G322200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G322200 chr4B 100.000 2944 0 0 1 2944 612878807 612875864 0.000000e+00 5437.0
1 TraesCS4B01G322200 chr4B 96.135 802 26 4 1 799 103052032 103051233 0.000000e+00 1304.0
2 TraesCS4B01G322200 chr4B 95.718 794 30 3 1 792 462208168 462207377 0.000000e+00 1275.0
3 TraesCS4B01G322200 chr4D 90.203 1480 69 24 792 2232 483041878 483040436 0.000000e+00 1860.0
4 TraesCS4B01G322200 chr4D 87.560 209 17 3 2292 2499 483040435 483040235 1.760000e-57 233.0
5 TraesCS4B01G322200 chr4D 84.831 178 25 2 2762 2937 360115656 360115833 8.380000e-41 178.0
6 TraesCS4B01G322200 chr4D 82.741 197 28 5 2495 2686 112722005 112721810 1.400000e-38 171.0
7 TraesCS4B01G322200 chr5A 83.725 1745 108 78 795 2501 663190454 663188848 0.000000e+00 1487.0
8 TraesCS4B01G322200 chr5A 77.060 449 46 23 2001 2428 432469229 432468817 3.850000e-49 206.0
9 TraesCS4B01G322200 chr5A 77.273 176 33 6 2508 2677 676905463 676905637 2.420000e-16 97.1
10 TraesCS4B01G322200 chr5B 97.613 796 17 2 1 794 609606349 609607144 0.000000e+00 1363.0
11 TraesCS4B01G322200 chr5B 93.921 806 33 4 1 792 633968437 633967634 0.000000e+00 1203.0
12 TraesCS4B01G322200 chr1B 96.442 787 25 2 1 786 552309481 552310265 0.000000e+00 1295.0
13 TraesCS4B01G322200 chr1B 80.447 179 30 4 2766 2940 434831956 434832133 6.620000e-27 132.0
14 TraesCS4B01G322200 chr2B 96.315 787 25 3 1 786 44907777 44908560 0.000000e+00 1290.0
15 TraesCS4B01G322200 chr2B 97.302 556 13 1 1 556 151499532 151500085 0.000000e+00 942.0
16 TraesCS4B01G322200 chr6B 98.090 733 13 1 1 733 687048214 687048945 0.000000e+00 1275.0
17 TraesCS4B01G322200 chr6B 82.836 134 17 3 1397 1527 717596746 717596616 6.670000e-22 115.0
18 TraesCS4B01G322200 chr3B 95.426 787 33 2 1 786 504065887 504065103 0.000000e+00 1251.0
19 TraesCS4B01G322200 chr3B 95.806 453 15 3 336 786 589555806 589555356 0.000000e+00 728.0
20 TraesCS4B01G322200 chr3B 94.292 473 18 4 321 786 21409432 21408962 0.000000e+00 715.0
21 TraesCS4B01G322200 chr3B 85.635 181 14 7 2762 2940 400306775 400306945 2.330000e-41 180.0
22 TraesCS4B01G322200 chr3B 82.734 139 16 5 2536 2672 739325339 739325207 1.850000e-22 117.0
23 TraesCS4B01G322200 chr3B 92.453 53 4 0 2890 2942 734747914 734747966 3.150000e-10 76.8
24 TraesCS4B01G322200 chr7B 93.895 475 24 4 321 792 380701934 380701462 0.000000e+00 712.0
25 TraesCS4B01G322200 chr7B 80.000 135 25 2 1393 1526 734430594 734430727 6.710000e-17 99.0
26 TraesCS4B01G322200 chr7B 89.583 48 4 1 1872 1919 671704634 671704588 3.170000e-05 60.2
27 TraesCS4B01G322200 chr3D 85.792 183 14 7 2762 2942 319856801 319856629 1.800000e-42 183.0
28 TraesCS4B01G322200 chr3D 78.723 188 29 9 2494 2680 593235186 593235009 6.670000e-22 115.0
29 TraesCS4B01G322200 chr3D 89.583 48 4 1 1872 1919 55347654 55347700 3.170000e-05 60.2
30 TraesCS4B01G322200 chr3A 84.153 183 26 3 2761 2942 606265613 606265793 1.080000e-39 174.0
31 TraesCS4B01G322200 chr3A 83.060 183 22 7 2497 2673 550706639 550706818 1.090000e-34 158.0
32 TraesCS4B01G322200 chr1D 83.607 183 29 1 2759 2940 139141526 139141344 1.400000e-38 171.0
33 TraesCS4B01G322200 chr1D 83.803 142 23 0 2799 2940 322161476 322161617 5.120000e-28 135.0
34 TraesCS4B01G322200 chr1D 85.484 62 5 4 2762 2819 402364674 402364735 8.810000e-06 62.1
35 TraesCS4B01G322200 chr4A 81.421 183 28 5 2762 2940 723750000 723750180 8.500000e-31 145.0
36 TraesCS4B01G322200 chr4A 84.043 94 11 4 2587 2678 36099640 36099731 1.450000e-13 87.9
37 TraesCS4B01G322200 chr7D 81.818 165 20 5 2523 2678 64007143 64007306 2.380000e-26 130.0
38 TraesCS4B01G322200 chr7D 89.583 48 4 1 1872 1919 531593716 531593670 3.170000e-05 60.2
39 TraesCS4B01G322200 chr6D 82.166 157 23 4 2762 2915 81162912 81163066 2.380000e-26 130.0
40 TraesCS4B01G322200 chr6D 85.417 96 14 0 1431 1526 472568598 472568503 1.870000e-17 100.0
41 TraesCS4B01G322200 chr6A 83.582 134 16 3 1397 1527 617097557 617097687 1.430000e-23 121.0
42 TraesCS4B01G322200 chr2A 82.308 130 9 10 2552 2672 649483335 649483459 1.870000e-17 100.0
43 TraesCS4B01G322200 chr2A 100.000 28 0 0 1944 1971 43817952 43817925 5.000000e-03 52.8
44 TraesCS4B01G322200 chr2A 100.000 28 0 0 1944 1971 43842238 43842211 5.000000e-03 52.8
45 TraesCS4B01G322200 chr2A 100.000 28 0 0 1944 1971 43900217 43900190 5.000000e-03 52.8
46 TraesCS4B01G322200 chr1A 78.621 145 28 2 2531 2672 480574196 480574340 3.120000e-15 93.5
47 TraesCS4B01G322200 chr7A 89.583 48 4 1 1872 1919 682896616 682896662 3.170000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G322200 chr4B 612875864 612878807 2943 True 5437.0 5437 100.0000 1 2944 1 chr4B.!!$R3 2943
1 TraesCS4B01G322200 chr4B 103051233 103052032 799 True 1304.0 1304 96.1350 1 799 1 chr4B.!!$R1 798
2 TraesCS4B01G322200 chr4B 462207377 462208168 791 True 1275.0 1275 95.7180 1 792 1 chr4B.!!$R2 791
3 TraesCS4B01G322200 chr4D 483040235 483041878 1643 True 1046.5 1860 88.8815 792 2499 2 chr4D.!!$R2 1707
4 TraesCS4B01G322200 chr5A 663188848 663190454 1606 True 1487.0 1487 83.7250 795 2501 1 chr5A.!!$R2 1706
5 TraesCS4B01G322200 chr5B 609606349 609607144 795 False 1363.0 1363 97.6130 1 794 1 chr5B.!!$F1 793
6 TraesCS4B01G322200 chr5B 633967634 633968437 803 True 1203.0 1203 93.9210 1 792 1 chr5B.!!$R1 791
7 TraesCS4B01G322200 chr1B 552309481 552310265 784 False 1295.0 1295 96.4420 1 786 1 chr1B.!!$F2 785
8 TraesCS4B01G322200 chr2B 44907777 44908560 783 False 1290.0 1290 96.3150 1 786 1 chr2B.!!$F1 785
9 TraesCS4B01G322200 chr2B 151499532 151500085 553 False 942.0 942 97.3020 1 556 1 chr2B.!!$F2 555
10 TraesCS4B01G322200 chr6B 687048214 687048945 731 False 1275.0 1275 98.0900 1 733 1 chr6B.!!$F1 732
11 TraesCS4B01G322200 chr3B 504065103 504065887 784 True 1251.0 1251 95.4260 1 786 1 chr3B.!!$R2 785

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
989 1016 1.379916 CTGCCATTCCACTCCACCA 59.62 57.895 0.0 0.0 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2883 2984 0.034186 TGGATTTGAGGCTCCGCATT 60.034 50.0 12.86 0.0 34.05 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 2.358957 GTGTGGCTGCTGATGATTGTA 58.641 47.619 0.00 0.00 0.00 2.41
95 96 5.651576 TGGCTGCTGATGATTGTAATGTTTA 59.348 36.000 0.00 0.00 0.00 2.01
762 779 5.414454 CGGGGTCAGATCTTGATTTTGTTTA 59.586 40.000 0.00 0.00 38.29 2.01
812 830 2.933666 CACGCTGCAGACACACAG 59.066 61.111 20.43 1.24 36.96 3.66
816 834 2.968697 CTGCAGACACACAGCGCA 60.969 61.111 8.42 0.00 33.65 6.09
928 949 4.022155 GCCATTACTAGTAGGAGTACTGCC 60.022 50.000 11.20 6.99 39.96 4.85
986 1013 2.046023 CGCTGCCATTCCACTCCA 60.046 61.111 0.00 0.00 0.00 3.86
989 1016 1.379916 CTGCCATTCCACTCCACCA 59.620 57.895 0.00 0.00 0.00 4.17
1021 1053 0.672401 GTGATCCGGCCAAGAACGAA 60.672 55.000 2.24 0.00 0.00 3.85
1022 1054 0.672401 TGATCCGGCCAAGAACGAAC 60.672 55.000 2.24 0.00 0.00 3.95
1023 1055 1.366854 GATCCGGCCAAGAACGAACC 61.367 60.000 2.24 0.00 0.00 3.62
1024 1056 3.419759 CCGGCCAAGAACGAACCG 61.420 66.667 2.24 0.00 43.44 4.44
1025 1057 3.419759 CGGCCAAGAACGAACCGG 61.420 66.667 2.24 0.00 40.18 5.28
1026 1058 3.733960 GGCCAAGAACGAACCGGC 61.734 66.667 0.00 0.00 42.21 6.13
1027 1059 3.733960 GCCAAGAACGAACCGGCC 61.734 66.667 0.00 0.00 36.73 6.13
1028 1060 3.053896 CCAAGAACGAACCGGCCC 61.054 66.667 0.00 0.00 0.00 5.80
1029 1061 3.053896 CAAGAACGAACCGGCCCC 61.054 66.667 0.00 0.00 0.00 5.80
1030 1062 4.692475 AAGAACGAACCGGCCCCG 62.692 66.667 0.00 5.10 39.44 5.73
1420 1455 1.676678 GCCATCTGCCTGTCGGAGTA 61.677 60.000 0.00 0.00 32.71 2.59
1675 1716 1.501741 CCCGTTTCTTGCCATGACG 59.498 57.895 0.00 0.00 0.00 4.35
1730 1781 3.897325 CATGGATGCATAATGTGTCTGC 58.103 45.455 0.00 0.00 36.45 4.26
1732 1783 1.265095 GGATGCATAATGTGTCTGCGG 59.735 52.381 0.00 0.00 38.75 5.69
1816 1868 1.999735 TGTTTTCATGGACTCGATCGC 59.000 47.619 11.09 0.00 0.00 4.58
1860 1912 5.964958 ATCCGTTGAATTTCAGTTGACAT 57.035 34.783 0.00 0.00 0.00 3.06
1906 1958 7.282224 AGCAATTTCAGTACAACACAAGACTTA 59.718 33.333 0.00 0.00 0.00 2.24
1912 1964 9.781834 TTCAGTACAACACAAGACTTAAAAATG 57.218 29.630 0.00 0.00 0.00 2.32
1983 2035 9.796062 CAAACCGAAATCATTGAAATTTACTTG 57.204 29.630 0.00 0.00 0.00 3.16
2037 2089 1.065709 GGGCCTCGATTTGGTCAAGTA 60.066 52.381 0.84 0.00 0.00 2.24
2039 2091 3.279434 GGCCTCGATTTGGTCAAGTATT 58.721 45.455 0.00 0.00 0.00 1.89
2057 2109 2.810439 TTACAGTTGGTTTGCATGCC 57.190 45.000 16.68 0.00 0.00 4.40
2112 2176 7.654022 TTTCTAGTTCAACCATTTTTCCTGT 57.346 32.000 0.00 0.00 0.00 4.00
2124 2188 8.193953 ACCATTTTTCCTGTCAAAGTTATCAT 57.806 30.769 0.00 0.00 0.00 2.45
2125 2189 8.306761 ACCATTTTTCCTGTCAAAGTTATCATC 58.693 33.333 0.00 0.00 0.00 2.92
2126 2190 8.306038 CCATTTTTCCTGTCAAAGTTATCATCA 58.694 33.333 0.00 0.00 0.00 3.07
2127 2191 9.695526 CATTTTTCCTGTCAAAGTTATCATCAA 57.304 29.630 0.00 0.00 0.00 2.57
2133 2197 7.939039 TCCTGTCAAAGTTATCATCAAGAAAGT 59.061 33.333 0.00 0.00 0.00 2.66
2137 2201 9.604626 GTCAAAGTTATCATCAAGAAAGTTCAG 57.395 33.333 0.00 0.00 0.00 3.02
2155 2219 1.079503 AGAAAAGAACTGGCGATCGC 58.920 50.000 31.52 31.52 41.06 4.58
2180 2251 0.315251 GTTTTCTTCCAGCAGGGCAC 59.685 55.000 0.00 0.00 36.21 5.01
2194 2265 3.663176 GCACTGCCGCTTGCTTCA 61.663 61.111 9.55 0.00 42.00 3.02
2195 2266 3.033184 CACTGCCGCTTGCTTCAA 58.967 55.556 0.00 0.00 42.00 2.69
2196 2267 1.081641 CACTGCCGCTTGCTTCAAG 60.082 57.895 2.40 2.40 43.57 3.02
2197 2268 1.526917 ACTGCCGCTTGCTTCAAGT 60.527 52.632 8.18 0.00 42.77 3.16
2198 2269 0.250295 ACTGCCGCTTGCTTCAAGTA 60.250 50.000 8.18 0.00 42.77 2.24
2209 2282 5.220854 GCTTGCTTCAAGTAAGTTCAGTTGA 60.221 40.000 15.74 0.00 42.77 3.18
2232 2305 4.160626 AGTGTGGCTACTTAACCTCTGATC 59.839 45.833 0.64 0.00 0.00 2.92
2233 2306 3.130516 TGTGGCTACTTAACCTCTGATCG 59.869 47.826 0.64 0.00 0.00 3.69
2234 2307 2.693591 TGGCTACTTAACCTCTGATCGG 59.306 50.000 0.00 0.00 0.00 4.18
2235 2308 2.036089 GGCTACTTAACCTCTGATCGGG 59.964 54.545 0.62 0.00 0.00 5.14
2236 2309 2.694109 GCTACTTAACCTCTGATCGGGT 59.306 50.000 0.62 0.18 37.44 5.28
2237 2310 3.132467 GCTACTTAACCTCTGATCGGGTT 59.868 47.826 17.48 17.48 46.16 4.11
2238 2311 3.889520 ACTTAACCTCTGATCGGGTTC 57.110 47.619 17.04 0.00 43.74 3.62
2239 2312 3.170717 ACTTAACCTCTGATCGGGTTCA 58.829 45.455 17.04 8.90 43.74 3.18
2240 2313 3.775316 ACTTAACCTCTGATCGGGTTCAT 59.225 43.478 17.04 5.72 43.74 2.57
2241 2314 2.990066 AACCTCTGATCGGGTTCATC 57.010 50.000 10.50 0.00 41.38 2.92
2242 2315 0.747255 ACCTCTGATCGGGTTCATCG 59.253 55.000 0.62 0.00 30.80 3.84
2243 2316 0.747255 CCTCTGATCGGGTTCATCGT 59.253 55.000 0.62 0.00 0.00 3.73
2244 2317 1.137086 CCTCTGATCGGGTTCATCGTT 59.863 52.381 0.62 0.00 0.00 3.85
2245 2318 2.418746 CCTCTGATCGGGTTCATCGTTT 60.419 50.000 0.62 0.00 0.00 3.60
2246 2319 3.262420 CTCTGATCGGGTTCATCGTTTT 58.738 45.455 0.62 0.00 0.00 2.43
2247 2320 3.259064 TCTGATCGGGTTCATCGTTTTC 58.741 45.455 0.62 0.00 0.00 2.29
2248 2321 2.351726 CTGATCGGGTTCATCGTTTTCC 59.648 50.000 0.00 0.00 0.00 3.13
2249 2322 2.027561 TGATCGGGTTCATCGTTTTCCT 60.028 45.455 0.00 0.00 0.00 3.36
2250 2323 3.196039 TGATCGGGTTCATCGTTTTCCTA 59.804 43.478 0.00 0.00 0.00 2.94
2251 2324 3.899052 TCGGGTTCATCGTTTTCCTAT 57.101 42.857 0.00 0.00 0.00 2.57
2252 2325 4.210724 TCGGGTTCATCGTTTTCCTATT 57.789 40.909 0.00 0.00 0.00 1.73
2253 2326 5.341872 TCGGGTTCATCGTTTTCCTATTA 57.658 39.130 0.00 0.00 0.00 0.98
2254 2327 5.111293 TCGGGTTCATCGTTTTCCTATTAC 58.889 41.667 0.00 0.00 0.00 1.89
2255 2328 5.105228 TCGGGTTCATCGTTTTCCTATTACT 60.105 40.000 0.00 0.00 0.00 2.24
2256 2329 5.006358 CGGGTTCATCGTTTTCCTATTACTG 59.994 44.000 0.00 0.00 0.00 2.74
2257 2330 5.220796 GGGTTCATCGTTTTCCTATTACTGC 60.221 44.000 0.00 0.00 0.00 4.40
2258 2331 5.353123 GGTTCATCGTTTTCCTATTACTGCA 59.647 40.000 0.00 0.00 0.00 4.41
2259 2332 6.038271 GGTTCATCGTTTTCCTATTACTGCAT 59.962 38.462 0.00 0.00 0.00 3.96
2260 2333 6.603237 TCATCGTTTTCCTATTACTGCATG 57.397 37.500 0.00 0.00 0.00 4.06
2261 2334 6.112734 TCATCGTTTTCCTATTACTGCATGT 58.887 36.000 0.00 0.00 0.00 3.21
2262 2335 6.257849 TCATCGTTTTCCTATTACTGCATGTC 59.742 38.462 0.00 0.00 0.00 3.06
2263 2336 4.873827 TCGTTTTCCTATTACTGCATGTCC 59.126 41.667 0.00 0.00 0.00 4.02
2264 2337 4.634004 CGTTTTCCTATTACTGCATGTCCA 59.366 41.667 0.00 0.00 0.00 4.02
2265 2338 5.296780 CGTTTTCCTATTACTGCATGTCCAT 59.703 40.000 0.00 0.00 0.00 3.41
2266 2339 6.183360 CGTTTTCCTATTACTGCATGTCCATT 60.183 38.462 0.00 0.00 0.00 3.16
2267 2340 7.011950 CGTTTTCCTATTACTGCATGTCCATTA 59.988 37.037 0.00 0.00 0.00 1.90
2268 2341 8.345565 GTTTTCCTATTACTGCATGTCCATTAG 58.654 37.037 0.00 0.00 0.00 1.73
2269 2342 6.994421 TCCTATTACTGCATGTCCATTAGA 57.006 37.500 0.00 0.00 0.00 2.10
2270 2343 6.759272 TCCTATTACTGCATGTCCATTAGAC 58.241 40.000 0.00 0.00 46.51 2.59
2271 2344 5.934625 CCTATTACTGCATGTCCATTAGACC 59.065 44.000 0.00 0.00 45.68 3.85
2272 2345 2.717639 ACTGCATGTCCATTAGACCC 57.282 50.000 0.00 0.00 45.68 4.46
2273 2346 1.915489 ACTGCATGTCCATTAGACCCA 59.085 47.619 0.00 0.00 45.68 4.51
2274 2347 2.092753 ACTGCATGTCCATTAGACCCAG 60.093 50.000 0.00 0.00 45.68 4.45
2275 2348 2.171237 CTGCATGTCCATTAGACCCAGA 59.829 50.000 0.00 0.00 45.68 3.86
2276 2349 2.171237 TGCATGTCCATTAGACCCAGAG 59.829 50.000 0.00 0.00 45.68 3.35
2277 2350 2.435805 GCATGTCCATTAGACCCAGAGA 59.564 50.000 0.00 0.00 45.68 3.10
2278 2351 3.118261 GCATGTCCATTAGACCCAGAGAA 60.118 47.826 0.00 0.00 45.68 2.87
2279 2352 4.446371 CATGTCCATTAGACCCAGAGAAC 58.554 47.826 0.00 0.00 45.68 3.01
2280 2353 3.791320 TGTCCATTAGACCCAGAGAACT 58.209 45.455 0.00 0.00 45.68 3.01
2281 2354 4.942944 TGTCCATTAGACCCAGAGAACTA 58.057 43.478 0.00 0.00 45.68 2.24
2282 2355 4.710375 TGTCCATTAGACCCAGAGAACTAC 59.290 45.833 0.00 0.00 45.68 2.73
2283 2356 4.957327 GTCCATTAGACCCAGAGAACTACT 59.043 45.833 0.00 0.00 39.84 2.57
2284 2357 4.956700 TCCATTAGACCCAGAGAACTACTG 59.043 45.833 0.00 0.00 35.43 2.74
2285 2358 4.442192 CCATTAGACCCAGAGAACTACTGC 60.442 50.000 0.00 0.00 34.47 4.40
2286 2359 2.614134 AGACCCAGAGAACTACTGCT 57.386 50.000 0.00 0.00 34.47 4.24
2287 2360 3.741245 AGACCCAGAGAACTACTGCTA 57.259 47.619 0.00 0.00 34.47 3.49
2288 2361 3.358118 AGACCCAGAGAACTACTGCTAC 58.642 50.000 0.00 0.00 34.47 3.58
2289 2362 3.010808 AGACCCAGAGAACTACTGCTACT 59.989 47.826 0.00 0.00 34.47 2.57
2290 2363 3.093057 ACCCAGAGAACTACTGCTACTG 58.907 50.000 0.00 0.00 34.47 2.74
2336 2436 5.014123 ACAGTGTGATTTAGGATTTCAGGGA 59.986 40.000 0.00 0.00 0.00 4.20
2359 2459 6.151817 GGAATAATCTGATGCCTTTCATACCC 59.848 42.308 0.00 0.00 35.05 3.69
2366 2466 1.922447 TGCCTTTCATACCCCACTCAT 59.078 47.619 0.00 0.00 0.00 2.90
2367 2467 2.301346 GCCTTTCATACCCCACTCATG 58.699 52.381 0.00 0.00 0.00 3.07
2368 2468 2.301346 CCTTTCATACCCCACTCATGC 58.699 52.381 0.00 0.00 0.00 4.06
2369 2469 2.357050 CCTTTCATACCCCACTCATGCA 60.357 50.000 0.00 0.00 0.00 3.96
2370 2470 2.715749 TTCATACCCCACTCATGCAG 57.284 50.000 0.00 0.00 0.00 4.41
2371 2471 1.583556 TCATACCCCACTCATGCAGT 58.416 50.000 0.00 0.00 34.67 4.40
2372 2472 1.486310 TCATACCCCACTCATGCAGTC 59.514 52.381 0.00 0.00 30.26 3.51
2373 2473 1.210234 CATACCCCACTCATGCAGTCA 59.790 52.381 0.00 0.00 30.26 3.41
2374 2474 1.583556 TACCCCACTCATGCAGTCAT 58.416 50.000 0.00 0.00 30.26 3.06
2389 2489 2.991866 CAGTCATGCTACATGCGGATAG 59.008 50.000 2.65 0.00 46.63 2.08
2428 2528 5.513495 GTCACGAGATCAAGACTTGTATGTC 59.487 44.000 14.75 12.72 37.23 3.06
2429 2529 4.497251 CACGAGATCAAGACTTGTATGTCG 59.503 45.833 26.62 26.62 41.47 4.35
2430 2530 4.156190 ACGAGATCAAGACTTGTATGTCGT 59.844 41.667 27.40 27.40 39.63 4.34
2456 2556 5.557576 TCTCCTAATAGCTTGATGCATGT 57.442 39.130 2.46 0.00 45.94 3.21
2482 2583 8.952278 TGTTACATTGCTACGGATTATTTTCTT 58.048 29.630 0.00 0.00 0.00 2.52
2491 2592 6.830114 ACGGATTATTTTCTTAAGAGCTCG 57.170 37.500 8.37 5.63 0.00 5.03
2502 2603 8.603242 TTTCTTAAGAGCTCGTTTTTATCAGT 57.397 30.769 7.67 0.00 0.00 3.41
2503 2604 7.813852 TCTTAAGAGCTCGTTTTTATCAGTC 57.186 36.000 7.67 0.00 0.00 3.51
2504 2605 7.603651 TCTTAAGAGCTCGTTTTTATCAGTCT 58.396 34.615 7.67 0.00 0.00 3.24
2505 2606 8.088981 TCTTAAGAGCTCGTTTTTATCAGTCTT 58.911 33.333 7.67 0.00 0.00 3.01
2506 2607 6.473397 AAGAGCTCGTTTTTATCAGTCTTG 57.527 37.500 8.37 0.00 0.00 3.02
2507 2608 4.390297 AGAGCTCGTTTTTATCAGTCTTGC 59.610 41.667 8.37 0.00 0.00 4.01
2508 2609 4.319177 AGCTCGTTTTTATCAGTCTTGCT 58.681 39.130 0.00 0.00 0.00 3.91
2509 2610 5.479306 AGCTCGTTTTTATCAGTCTTGCTA 58.521 37.500 0.00 0.00 0.00 3.49
2510 2611 5.932303 AGCTCGTTTTTATCAGTCTTGCTAA 59.068 36.000 0.00 0.00 0.00 3.09
2511 2612 6.091441 AGCTCGTTTTTATCAGTCTTGCTAAG 59.909 38.462 0.00 0.00 0.00 2.18
2512 2613 6.128526 GCTCGTTTTTATCAGTCTTGCTAAGT 60.129 38.462 0.00 0.00 0.00 2.24
2513 2614 7.347508 TCGTTTTTATCAGTCTTGCTAAGTC 57.652 36.000 0.00 0.00 0.00 3.01
2514 2615 7.152645 TCGTTTTTATCAGTCTTGCTAAGTCT 58.847 34.615 0.00 0.00 0.00 3.24
2515 2616 7.328737 TCGTTTTTATCAGTCTTGCTAAGTCTC 59.671 37.037 0.00 0.00 0.00 3.36
2516 2617 7.116376 CGTTTTTATCAGTCTTGCTAAGTCTCA 59.884 37.037 0.00 0.00 0.00 3.27
2517 2618 8.439286 GTTTTTATCAGTCTTGCTAAGTCTCAG 58.561 37.037 0.00 0.00 0.00 3.35
2518 2619 6.842437 TTATCAGTCTTGCTAAGTCTCAGT 57.158 37.500 0.00 0.00 0.00 3.41
2519 2620 5.736951 ATCAGTCTTGCTAAGTCTCAGTT 57.263 39.130 0.00 0.00 0.00 3.16
2520 2621 5.127693 TCAGTCTTGCTAAGTCTCAGTTC 57.872 43.478 0.00 0.00 0.00 3.01
2521 2622 4.584743 TCAGTCTTGCTAAGTCTCAGTTCA 59.415 41.667 0.00 0.00 0.00 3.18
2522 2623 4.683781 CAGTCTTGCTAAGTCTCAGTTCAC 59.316 45.833 0.00 0.00 0.00 3.18
2523 2624 4.586841 AGTCTTGCTAAGTCTCAGTTCACT 59.413 41.667 0.00 0.00 0.00 3.41
2524 2625 4.683781 GTCTTGCTAAGTCTCAGTTCACTG 59.316 45.833 0.02 0.02 45.08 3.66
2538 2639 6.910536 CAGTTCACTGAGACTTTGTTAAGT 57.089 37.500 0.14 0.00 45.51 2.24
2568 2669 9.384764 AGTCGATAATATATTCGTGAGATCTCA 57.615 33.333 21.67 21.67 41.60 3.27
2582 2683 6.980051 TGAGATCTCACATGAAAATCAGTG 57.020 37.500 21.67 0.00 34.14 3.66
2583 2684 5.353400 TGAGATCTCACATGAAAATCAGTGC 59.647 40.000 21.67 0.00 34.14 4.40
2584 2685 5.250982 AGATCTCACATGAAAATCAGTGCA 58.749 37.500 0.00 0.00 30.78 4.57
2585 2686 5.708697 AGATCTCACATGAAAATCAGTGCAA 59.291 36.000 0.00 0.00 30.78 4.08
2586 2687 5.970317 TCTCACATGAAAATCAGTGCAAT 57.030 34.783 0.00 0.00 30.78 3.56
2587 2688 6.335471 TCTCACATGAAAATCAGTGCAATT 57.665 33.333 0.00 0.00 30.78 2.32
2588 2689 6.751157 TCTCACATGAAAATCAGTGCAATTT 58.249 32.000 0.00 0.00 30.78 1.82
2589 2690 7.211573 TCTCACATGAAAATCAGTGCAATTTT 58.788 30.769 7.19 7.19 38.64 1.82
2590 2691 7.711772 TCTCACATGAAAATCAGTGCAATTTTT 59.288 29.630 0.00 3.12 36.66 1.94
2614 2715 8.986477 TTTTCAGTTTTTCTTTTTCTCTCCTG 57.014 30.769 0.00 0.00 0.00 3.86
2615 2716 6.136541 TCAGTTTTTCTTTTTCTCTCCTGC 57.863 37.500 0.00 0.00 0.00 4.85
2616 2717 5.652014 TCAGTTTTTCTTTTTCTCTCCTGCA 59.348 36.000 0.00 0.00 0.00 4.41
2617 2718 6.322201 TCAGTTTTTCTTTTTCTCTCCTGCAT 59.678 34.615 0.00 0.00 0.00 3.96
2618 2719 6.420008 CAGTTTTTCTTTTTCTCTCCTGCATG 59.580 38.462 0.00 0.00 0.00 4.06
2619 2720 6.097412 AGTTTTTCTTTTTCTCTCCTGCATGT 59.903 34.615 0.00 0.00 0.00 3.21
2620 2721 6.469782 TTTTCTTTTTCTCTCCTGCATGTT 57.530 33.333 0.00 0.00 0.00 2.71
2621 2722 7.581213 TTTTCTTTTTCTCTCCTGCATGTTA 57.419 32.000 0.00 0.00 0.00 2.41
2622 2723 7.765695 TTTCTTTTTCTCTCCTGCATGTTAT 57.234 32.000 0.00 0.00 0.00 1.89
2623 2724 6.748333 TCTTTTTCTCTCCTGCATGTTATG 57.252 37.500 0.00 0.00 0.00 1.90
2624 2725 6.240894 TCTTTTTCTCTCCTGCATGTTATGT 58.759 36.000 0.00 0.00 0.00 2.29
2625 2726 6.372659 TCTTTTTCTCTCCTGCATGTTATGTC 59.627 38.462 0.00 0.00 0.00 3.06
2626 2727 4.824479 TTCTCTCCTGCATGTTATGTCA 57.176 40.909 0.00 0.00 0.00 3.58
2627 2728 4.128925 TCTCTCCTGCATGTTATGTCAC 57.871 45.455 0.00 0.00 0.00 3.67
2628 2729 3.771479 TCTCTCCTGCATGTTATGTCACT 59.229 43.478 0.00 0.00 0.00 3.41
2629 2730 4.118410 CTCTCCTGCATGTTATGTCACTC 58.882 47.826 0.00 0.00 0.00 3.51
2630 2731 2.862536 CTCCTGCATGTTATGTCACTCG 59.137 50.000 0.00 0.00 0.00 4.18
2631 2732 1.935873 CCTGCATGTTATGTCACTCGG 59.064 52.381 0.00 0.00 0.00 4.63
2632 2733 2.621338 CTGCATGTTATGTCACTCGGT 58.379 47.619 0.00 0.00 0.00 4.69
2633 2734 2.345876 TGCATGTTATGTCACTCGGTG 58.654 47.619 0.00 0.00 34.45 4.94
2634 2735 2.028567 TGCATGTTATGTCACTCGGTGA 60.029 45.455 3.02 3.02 40.50 4.02
2635 2736 3.000041 GCATGTTATGTCACTCGGTGAA 59.000 45.455 8.09 1.44 44.49 3.18
2636 2737 3.062639 GCATGTTATGTCACTCGGTGAAG 59.937 47.826 8.09 0.00 44.49 3.02
2637 2738 4.494484 CATGTTATGTCACTCGGTGAAGA 58.506 43.478 8.09 0.38 44.49 2.87
2638 2739 3.909430 TGTTATGTCACTCGGTGAAGAC 58.091 45.455 8.09 6.08 44.49 3.01
2639 2740 3.572682 TGTTATGTCACTCGGTGAAGACT 59.427 43.478 8.09 0.00 44.49 3.24
2640 2741 4.038763 TGTTATGTCACTCGGTGAAGACTT 59.961 41.667 8.09 0.00 44.49 3.01
2641 2742 5.242171 TGTTATGTCACTCGGTGAAGACTTA 59.758 40.000 8.09 0.00 44.49 2.24
2642 2743 3.917329 TGTCACTCGGTGAAGACTTAG 57.083 47.619 8.09 0.00 44.49 2.18
2643 2744 3.220110 TGTCACTCGGTGAAGACTTAGT 58.780 45.455 8.09 0.00 44.49 2.24
2644 2745 3.635373 TGTCACTCGGTGAAGACTTAGTT 59.365 43.478 8.09 0.00 44.49 2.24
2645 2746 4.823442 TGTCACTCGGTGAAGACTTAGTTA 59.177 41.667 8.09 0.00 44.49 2.24
2646 2747 5.300034 TGTCACTCGGTGAAGACTTAGTTAA 59.700 40.000 8.09 0.00 44.49 2.01
2647 2748 6.183360 TGTCACTCGGTGAAGACTTAGTTAAA 60.183 38.462 8.09 0.00 44.49 1.52
2648 2749 6.867293 GTCACTCGGTGAAGACTTAGTTAAAT 59.133 38.462 8.09 0.00 44.49 1.40
2649 2750 7.062022 GTCACTCGGTGAAGACTTAGTTAAATC 59.938 40.741 8.09 0.00 44.49 2.17
2650 2751 7.039923 TCACTCGGTGAAGACTTAGTTAAATCT 60.040 37.037 4.51 0.00 39.78 2.40
2651 2752 7.273815 CACTCGGTGAAGACTTAGTTAAATCTC 59.726 40.741 0.00 0.00 35.23 2.75
2652 2753 7.039923 ACTCGGTGAAGACTTAGTTAAATCTCA 60.040 37.037 0.00 0.00 0.00 3.27
2653 2754 7.313646 TCGGTGAAGACTTAGTTAAATCTCAG 58.686 38.462 0.00 0.00 0.00 3.35
2654 2755 7.039923 TCGGTGAAGACTTAGTTAAATCTCAGT 60.040 37.037 0.00 0.00 0.00 3.41
2655 2756 7.273815 CGGTGAAGACTTAGTTAAATCTCAGTC 59.726 40.741 0.00 0.00 38.33 3.51
2656 2757 7.273815 GGTGAAGACTTAGTTAAATCTCAGTCG 59.726 40.741 0.00 0.00 41.07 4.18
2657 2758 8.021973 GTGAAGACTTAGTTAAATCTCAGTCGA 58.978 37.037 0.00 0.00 41.07 4.20
2658 2759 8.021973 TGAAGACTTAGTTAAATCTCAGTCGAC 58.978 37.037 7.70 7.70 41.07 4.20
2659 2760 7.690952 AGACTTAGTTAAATCTCAGTCGACT 57.309 36.000 13.58 13.58 41.07 4.18
2660 2761 7.531716 AGACTTAGTTAAATCTCAGTCGACTG 58.468 38.462 34.76 34.76 41.07 3.51
2671 2772 2.701107 CAGTCGACTGAGACCTAGTCA 58.299 52.381 36.73 0.00 46.59 3.41
2672 2773 2.417239 CAGTCGACTGAGACCTAGTCAC 59.583 54.545 36.73 0.00 46.59 3.67
2673 2774 1.394227 GTCGACTGAGACCTAGTCACG 59.606 57.143 8.70 0.00 43.65 4.35
2674 2775 0.097325 CGACTGAGACCTAGTCACGC 59.903 60.000 0.00 0.00 43.65 5.34
2675 2776 0.452585 GACTGAGACCTAGTCACGCC 59.547 60.000 0.00 0.00 43.12 5.68
2676 2777 0.966370 ACTGAGACCTAGTCACGCCC 60.966 60.000 0.00 0.00 34.60 6.13
2677 2778 0.681564 CTGAGACCTAGTCACGCCCT 60.682 60.000 0.00 0.00 34.60 5.19
2678 2779 0.251653 TGAGACCTAGTCACGCCCTT 60.252 55.000 0.00 0.00 34.60 3.95
2679 2780 0.896226 GAGACCTAGTCACGCCCTTT 59.104 55.000 0.00 0.00 34.60 3.11
2680 2781 1.275573 GAGACCTAGTCACGCCCTTTT 59.724 52.381 0.00 0.00 34.60 2.27
2681 2782 1.697982 AGACCTAGTCACGCCCTTTTT 59.302 47.619 0.00 0.00 34.60 1.94
2725 2826 7.891498 ACCATTTAGTGTAGTTTTTCTTGGT 57.109 32.000 0.00 0.00 0.00 3.67
2726 2827 8.301252 ACCATTTAGTGTAGTTTTTCTTGGTT 57.699 30.769 0.00 0.00 0.00 3.67
2727 2828 8.194769 ACCATTTAGTGTAGTTTTTCTTGGTTG 58.805 33.333 0.00 0.00 0.00 3.77
2728 2829 8.410141 CCATTTAGTGTAGTTTTTCTTGGTTGA 58.590 33.333 0.00 0.00 0.00 3.18
2729 2830 9.450807 CATTTAGTGTAGTTTTTCTTGGTTGAG 57.549 33.333 0.00 0.00 0.00 3.02
2730 2831 8.795842 TTTAGTGTAGTTTTTCTTGGTTGAGA 57.204 30.769 0.00 0.00 0.00 3.27
2731 2832 8.974060 TTAGTGTAGTTTTTCTTGGTTGAGAT 57.026 30.769 0.00 0.00 0.00 2.75
2732 2833 7.264373 AGTGTAGTTTTTCTTGGTTGAGATG 57.736 36.000 0.00 0.00 0.00 2.90
2733 2834 7.054124 AGTGTAGTTTTTCTTGGTTGAGATGA 58.946 34.615 0.00 0.00 0.00 2.92
2734 2835 7.556275 AGTGTAGTTTTTCTTGGTTGAGATGAA 59.444 33.333 0.00 0.00 0.00 2.57
2735 2836 8.188139 GTGTAGTTTTTCTTGGTTGAGATGAAA 58.812 33.333 0.00 0.00 0.00 2.69
2736 2837 8.405531 TGTAGTTTTTCTTGGTTGAGATGAAAG 58.594 33.333 0.00 0.00 0.00 2.62
2737 2838 6.276091 AGTTTTTCTTGGTTGAGATGAAAGC 58.724 36.000 0.00 0.00 0.00 3.51
2738 2839 4.488126 TTTCTTGGTTGAGATGAAAGCG 57.512 40.909 0.00 0.00 0.00 4.68
2739 2840 2.426522 TCTTGGTTGAGATGAAAGCGG 58.573 47.619 0.00 0.00 0.00 5.52
2740 2841 0.881118 TTGGTTGAGATGAAAGCGGC 59.119 50.000 0.00 0.00 0.00 6.53
2741 2842 0.960364 TGGTTGAGATGAAAGCGGCC 60.960 55.000 0.00 0.00 0.00 6.13
2742 2843 1.657751 GGTTGAGATGAAAGCGGCCC 61.658 60.000 0.00 0.00 0.00 5.80
2743 2844 0.678048 GTTGAGATGAAAGCGGCCCT 60.678 55.000 0.00 0.00 0.00 5.19
2744 2845 0.038166 TTGAGATGAAAGCGGCCCTT 59.962 50.000 0.00 0.00 34.51 3.95
2745 2846 0.677731 TGAGATGAAAGCGGCCCTTG 60.678 55.000 7.18 0.00 33.01 3.61
2746 2847 0.392998 GAGATGAAAGCGGCCCTTGA 60.393 55.000 7.18 0.00 33.01 3.02
2747 2848 0.257039 AGATGAAAGCGGCCCTTGAT 59.743 50.000 7.18 3.64 33.01 2.57
2748 2849 1.106285 GATGAAAGCGGCCCTTGATT 58.894 50.000 7.18 0.00 33.01 2.57
2749 2850 0.819582 ATGAAAGCGGCCCTTGATTG 59.180 50.000 7.18 0.00 33.01 2.67
2750 2851 1.250154 TGAAAGCGGCCCTTGATTGG 61.250 55.000 7.18 0.00 33.01 3.16
2751 2852 1.228862 AAAGCGGCCCTTGATTGGT 60.229 52.632 7.18 0.00 33.01 3.67
2752 2853 0.831711 AAAGCGGCCCTTGATTGGTT 60.832 50.000 7.18 0.00 33.01 3.67
2753 2854 1.250840 AAGCGGCCCTTGATTGGTTC 61.251 55.000 0.00 0.00 30.99 3.62
2754 2855 3.051392 GCGGCCCTTGATTGGTTCG 62.051 63.158 0.00 0.00 0.00 3.95
2755 2856 1.674322 CGGCCCTTGATTGGTTCGT 60.674 57.895 0.00 0.00 0.00 3.85
2756 2857 1.883021 GGCCCTTGATTGGTTCGTG 59.117 57.895 0.00 0.00 0.00 4.35
2757 2858 0.893727 GGCCCTTGATTGGTTCGTGT 60.894 55.000 0.00 0.00 0.00 4.49
2758 2859 1.612199 GGCCCTTGATTGGTTCGTGTA 60.612 52.381 0.00 0.00 0.00 2.90
2759 2860 1.467342 GCCCTTGATTGGTTCGTGTAC 59.533 52.381 0.00 0.00 0.00 2.90
2760 2861 2.874457 GCCCTTGATTGGTTCGTGTACT 60.874 50.000 0.00 0.00 0.00 2.73
2761 2862 3.408634 CCCTTGATTGGTTCGTGTACTT 58.591 45.455 0.00 0.00 0.00 2.24
2762 2863 4.571919 CCCTTGATTGGTTCGTGTACTTA 58.428 43.478 0.00 0.00 0.00 2.24
2763 2864 4.998672 CCCTTGATTGGTTCGTGTACTTAA 59.001 41.667 0.00 0.00 0.00 1.85
2764 2865 5.121768 CCCTTGATTGGTTCGTGTACTTAAG 59.878 44.000 0.00 0.00 0.00 1.85
2765 2866 5.121768 CCTTGATTGGTTCGTGTACTTAAGG 59.878 44.000 7.53 0.00 0.00 2.69
2766 2867 3.998341 TGATTGGTTCGTGTACTTAAGGC 59.002 43.478 7.53 0.00 0.00 4.35
2767 2868 3.472283 TTGGTTCGTGTACTTAAGGCA 57.528 42.857 7.53 2.68 0.00 4.75
2768 2869 3.688694 TGGTTCGTGTACTTAAGGCAT 57.311 42.857 7.53 0.00 0.00 4.40
2769 2870 3.592059 TGGTTCGTGTACTTAAGGCATC 58.408 45.455 7.53 0.96 0.00 3.91
2770 2871 3.259876 TGGTTCGTGTACTTAAGGCATCT 59.740 43.478 7.53 0.00 0.00 2.90
2771 2872 4.463539 TGGTTCGTGTACTTAAGGCATCTA 59.536 41.667 7.53 0.00 0.00 1.98
2772 2873 4.802563 GGTTCGTGTACTTAAGGCATCTAC 59.197 45.833 7.53 0.55 0.00 2.59
2773 2874 5.404946 GTTCGTGTACTTAAGGCATCTACA 58.595 41.667 7.53 3.26 0.00 2.74
2774 2875 5.648178 TCGTGTACTTAAGGCATCTACAA 57.352 39.130 7.53 0.00 0.00 2.41
2775 2876 5.404946 TCGTGTACTTAAGGCATCTACAAC 58.595 41.667 7.53 1.49 0.00 3.32
2776 2877 4.565564 CGTGTACTTAAGGCATCTACAACC 59.434 45.833 7.53 0.00 0.00 3.77
2777 2878 4.565564 GTGTACTTAAGGCATCTACAACCG 59.434 45.833 7.53 0.00 0.00 4.44
2778 2879 3.261981 ACTTAAGGCATCTACAACCGG 57.738 47.619 7.53 0.00 0.00 5.28
2779 2880 2.835764 ACTTAAGGCATCTACAACCGGA 59.164 45.455 9.46 0.00 0.00 5.14
2780 2881 2.973694 TAAGGCATCTACAACCGGAC 57.026 50.000 9.46 0.00 0.00 4.79
2781 2882 1.276622 AAGGCATCTACAACCGGACT 58.723 50.000 9.46 0.00 0.00 3.85
2782 2883 1.276622 AGGCATCTACAACCGGACTT 58.723 50.000 9.46 0.00 0.00 3.01
2783 2884 1.066143 AGGCATCTACAACCGGACTTG 60.066 52.381 9.46 5.71 0.00 3.16
2784 2885 1.369625 GCATCTACAACCGGACTTGG 58.630 55.000 9.46 0.00 0.00 3.61
2785 2886 1.369625 CATCTACAACCGGACTTGGC 58.630 55.000 9.46 0.00 0.00 4.52
2786 2887 0.981183 ATCTACAACCGGACTTGGCA 59.019 50.000 9.46 0.00 0.00 4.92
2787 2888 0.759959 TCTACAACCGGACTTGGCAA 59.240 50.000 9.46 0.00 0.00 4.52
2788 2889 1.141254 TCTACAACCGGACTTGGCAAA 59.859 47.619 9.46 0.00 0.00 3.68
2789 2890 2.159382 CTACAACCGGACTTGGCAAAT 58.841 47.619 9.46 0.00 0.00 2.32
2790 2891 0.958822 ACAACCGGACTTGGCAAATC 59.041 50.000 9.46 0.00 0.00 2.17
2791 2892 0.243636 CAACCGGACTTGGCAAATCC 59.756 55.000 17.46 17.46 0.00 3.01
2796 2897 0.526211 GGACTTGGCAAATCCGTTCC 59.474 55.000 12.45 2.38 37.80 3.62
2797 2898 0.526211 GACTTGGCAAATCCGTTCCC 59.474 55.000 0.00 0.00 37.80 3.97
2798 2899 0.112412 ACTTGGCAAATCCGTTCCCT 59.888 50.000 0.00 0.00 37.80 4.20
2799 2900 1.353022 ACTTGGCAAATCCGTTCCCTA 59.647 47.619 0.00 0.00 37.80 3.53
2800 2901 2.025321 ACTTGGCAAATCCGTTCCCTAT 60.025 45.455 0.00 0.00 37.80 2.57
2801 2902 3.201266 ACTTGGCAAATCCGTTCCCTATA 59.799 43.478 0.00 0.00 37.80 1.31
2802 2903 3.202829 TGGCAAATCCGTTCCCTATAC 57.797 47.619 0.00 0.00 37.80 1.47
2803 2904 2.506231 TGGCAAATCCGTTCCCTATACA 59.494 45.455 0.00 0.00 37.80 2.29
2804 2905 2.876550 GGCAAATCCGTTCCCTATACAC 59.123 50.000 0.00 0.00 0.00 2.90
2805 2906 2.876550 GCAAATCCGTTCCCTATACACC 59.123 50.000 0.00 0.00 0.00 4.16
2806 2907 3.473625 CAAATCCGTTCCCTATACACCC 58.526 50.000 0.00 0.00 0.00 4.61
2807 2908 1.335145 ATCCGTTCCCTATACACCCG 58.665 55.000 0.00 0.00 0.00 5.28
2808 2909 1.068585 CCGTTCCCTATACACCCGC 59.931 63.158 0.00 0.00 0.00 6.13
2809 2910 1.678598 CCGTTCCCTATACACCCGCA 61.679 60.000 0.00 0.00 0.00 5.69
2810 2911 0.249322 CGTTCCCTATACACCCGCAG 60.249 60.000 0.00 0.00 0.00 5.18
2825 2926 2.511373 CAGGCGCGTCCAAGCATA 60.511 61.111 19.30 0.00 37.29 3.14
2826 2927 1.889105 CAGGCGCGTCCAAGCATAT 60.889 57.895 19.30 0.00 37.29 1.78
2827 2928 1.595382 AGGCGCGTCCAAGCATATC 60.595 57.895 19.30 0.00 37.29 1.63
2828 2929 2.607892 GGCGCGTCCAAGCATATCC 61.608 63.158 8.43 0.00 36.85 2.59
2829 2930 1.887242 GCGCGTCCAAGCATATCCA 60.887 57.895 8.43 0.00 36.85 3.41
2830 2931 1.934463 CGCGTCCAAGCATATCCAC 59.066 57.895 0.00 0.00 36.85 4.02
2831 2932 1.821241 CGCGTCCAAGCATATCCACG 61.821 60.000 0.00 0.00 36.85 4.94
2832 2933 1.498865 GCGTCCAAGCATATCCACGG 61.499 60.000 0.00 0.00 37.05 4.94
2833 2934 0.104120 CGTCCAAGCATATCCACGGA 59.896 55.000 0.00 0.00 0.00 4.69
2834 2935 1.583054 GTCCAAGCATATCCACGGAC 58.417 55.000 0.00 0.00 36.46 4.79
2835 2936 1.134521 GTCCAAGCATATCCACGGACA 60.135 52.381 0.00 0.00 42.04 4.02
2836 2937 1.768275 TCCAAGCATATCCACGGACAT 59.232 47.619 0.00 0.00 0.00 3.06
2837 2938 2.172505 TCCAAGCATATCCACGGACATT 59.827 45.455 0.00 0.00 0.00 2.71
2838 2939 2.291465 CCAAGCATATCCACGGACATTG 59.709 50.000 0.00 0.00 0.00 2.82
2839 2940 1.597742 AGCATATCCACGGACATTGC 58.402 50.000 8.09 8.09 0.00 3.56
2840 2941 0.593128 GCATATCCACGGACATTGCC 59.407 55.000 5.74 0.00 0.00 4.52
2841 2942 1.238439 CATATCCACGGACATTGCCC 58.762 55.000 0.00 0.00 0.00 5.36
2856 2957 3.252284 CCCGCCAGCCCCTCATAT 61.252 66.667 0.00 0.00 0.00 1.78
2857 2958 2.033141 CCGCCAGCCCCTCATATG 59.967 66.667 0.00 0.00 0.00 1.78
2858 2959 2.033141 CGCCAGCCCCTCATATGG 59.967 66.667 2.13 0.00 35.84 2.74
2859 2960 2.437897 GCCAGCCCCTCATATGGG 59.562 66.667 2.13 0.00 46.56 4.00
2860 2961 2.464403 GCCAGCCCCTCATATGGGT 61.464 63.158 1.00 0.00 45.70 4.51
2861 2962 2.011617 GCCAGCCCCTCATATGGGTT 62.012 60.000 1.00 0.00 45.70 4.11
2862 2963 3.426903 CAGCCCCTCATATGGGTTG 57.573 57.895 1.00 0.38 46.03 3.77
2863 2964 0.552848 CAGCCCCTCATATGGGTTGT 59.447 55.000 1.00 0.00 46.09 3.32
2864 2965 0.846693 AGCCCCTCATATGGGTTGTC 59.153 55.000 1.00 0.00 45.70 3.18
2865 2966 0.535102 GCCCCTCATATGGGTTGTCG 60.535 60.000 1.00 0.00 45.70 4.35
2866 2967 0.535102 CCCCTCATATGGGTTGTCGC 60.535 60.000 1.00 0.00 45.70 5.19
2867 2968 0.180171 CCCTCATATGGGTTGTCGCA 59.820 55.000 1.00 0.00 42.25 5.10
2868 2969 1.299541 CCTCATATGGGTTGTCGCAC 58.700 55.000 1.00 0.00 39.23 5.34
2869 2970 1.406751 CCTCATATGGGTTGTCGCACA 60.407 52.381 1.00 0.00 39.23 4.57
2870 2971 2.564771 CTCATATGGGTTGTCGCACAT 58.435 47.619 2.13 0.00 39.23 3.21
2871 2972 2.545526 CTCATATGGGTTGTCGCACATC 59.454 50.000 2.13 0.00 39.23 3.06
2872 2973 2.170397 TCATATGGGTTGTCGCACATCT 59.830 45.455 2.13 0.00 39.23 2.90
2873 2974 3.386402 TCATATGGGTTGTCGCACATCTA 59.614 43.478 2.13 0.00 39.23 1.98
2874 2975 2.024176 ATGGGTTGTCGCACATCTAC 57.976 50.000 0.00 0.00 39.23 2.59
2875 2976 0.682292 TGGGTTGTCGCACATCTACA 59.318 50.000 0.00 0.00 0.00 2.74
2876 2977 1.277842 TGGGTTGTCGCACATCTACAT 59.722 47.619 0.00 0.00 0.00 2.29
2877 2978 2.498078 TGGGTTGTCGCACATCTACATA 59.502 45.455 0.00 0.00 0.00 2.29
2878 2979 2.864343 GGGTTGTCGCACATCTACATAC 59.136 50.000 0.00 0.00 0.00 2.39
2879 2980 2.864343 GGTTGTCGCACATCTACATACC 59.136 50.000 0.00 0.00 0.00 2.73
2880 2981 3.430374 GGTTGTCGCACATCTACATACCT 60.430 47.826 0.00 0.00 0.00 3.08
2881 2982 3.710326 TGTCGCACATCTACATACCTC 57.290 47.619 0.00 0.00 0.00 3.85
2882 2983 3.020984 TGTCGCACATCTACATACCTCA 58.979 45.455 0.00 0.00 0.00 3.86
2883 2984 3.445805 TGTCGCACATCTACATACCTCAA 59.554 43.478 0.00 0.00 0.00 3.02
2884 2985 4.081917 TGTCGCACATCTACATACCTCAAA 60.082 41.667 0.00 0.00 0.00 2.69
2885 2986 5.050490 GTCGCACATCTACATACCTCAAAT 58.950 41.667 0.00 0.00 0.00 2.32
2886 2987 5.049828 TCGCACATCTACATACCTCAAATG 58.950 41.667 0.00 0.00 0.00 2.32
2887 2988 4.319046 CGCACATCTACATACCTCAAATGC 60.319 45.833 0.00 0.00 0.00 3.56
2888 2989 4.319046 GCACATCTACATACCTCAAATGCG 60.319 45.833 0.00 0.00 0.00 4.73
2889 2990 4.212004 CACATCTACATACCTCAAATGCGG 59.788 45.833 0.00 0.00 0.00 5.69
2890 2991 4.100963 ACATCTACATACCTCAAATGCGGA 59.899 41.667 0.00 0.00 0.00 5.54
2891 2992 4.322080 TCTACATACCTCAAATGCGGAG 57.678 45.455 0.00 0.00 0.00 4.63
2905 3006 2.028130 CGGAGCCTCAAATCCATGC 58.972 57.895 0.00 0.00 35.14 4.06
2906 3007 0.749091 CGGAGCCTCAAATCCATGCA 60.749 55.000 0.00 0.00 35.14 3.96
2907 3008 1.477553 GGAGCCTCAAATCCATGCAA 58.522 50.000 0.00 0.00 35.54 4.08
2908 3009 2.037144 GGAGCCTCAAATCCATGCAAT 58.963 47.619 0.00 0.00 35.54 3.56
2909 3010 2.035576 GGAGCCTCAAATCCATGCAATC 59.964 50.000 0.00 0.00 35.54 2.67
2910 3011 2.035576 GAGCCTCAAATCCATGCAATCC 59.964 50.000 0.00 0.00 0.00 3.01
2911 3012 1.758280 GCCTCAAATCCATGCAATCCA 59.242 47.619 0.00 0.00 0.00 3.41
2912 3013 2.367567 GCCTCAAATCCATGCAATCCAT 59.632 45.455 0.00 0.00 33.39 3.41
2924 3025 1.289276 CAATCCATGCACGTCGATCA 58.711 50.000 0.00 0.00 0.00 2.92
2925 3026 1.869132 CAATCCATGCACGTCGATCAT 59.131 47.619 0.00 0.00 0.00 2.45
2926 3027 3.059166 CAATCCATGCACGTCGATCATA 58.941 45.455 0.00 0.00 0.00 2.15
2927 3028 2.880963 TCCATGCACGTCGATCATAA 57.119 45.000 0.00 0.00 0.00 1.90
2928 3029 2.742774 TCCATGCACGTCGATCATAAG 58.257 47.619 0.00 0.00 0.00 1.73
2929 3030 2.360801 TCCATGCACGTCGATCATAAGA 59.639 45.455 0.00 0.15 0.00 2.10
2930 3031 3.005791 TCCATGCACGTCGATCATAAGAT 59.994 43.478 0.00 0.00 37.13 2.40
2931 3032 4.217550 TCCATGCACGTCGATCATAAGATA 59.782 41.667 0.00 0.00 33.72 1.98
2932 3033 4.324669 CCATGCACGTCGATCATAAGATAC 59.675 45.833 0.00 0.00 33.72 2.24
2933 3034 4.561735 TGCACGTCGATCATAAGATACA 57.438 40.909 0.00 0.00 33.72 2.29
2934 3035 4.927422 TGCACGTCGATCATAAGATACAA 58.073 39.130 0.00 0.00 33.72 2.41
2935 3036 5.344884 TGCACGTCGATCATAAGATACAAA 58.655 37.500 0.00 0.00 33.72 2.83
2936 3037 5.983118 TGCACGTCGATCATAAGATACAAAT 59.017 36.000 0.00 0.00 33.72 2.32
2937 3038 6.478673 TGCACGTCGATCATAAGATACAAATT 59.521 34.615 0.00 0.00 33.72 1.82
2938 3039 6.787515 GCACGTCGATCATAAGATACAAATTG 59.212 38.462 0.00 0.00 33.72 2.32
2939 3040 7.516785 GCACGTCGATCATAAGATACAAATTGT 60.517 37.037 3.43 3.43 33.72 2.71
2940 3041 8.328146 CACGTCGATCATAAGATACAAATTGTT 58.672 33.333 3.17 0.00 33.72 2.83
2941 3042 8.540492 ACGTCGATCATAAGATACAAATTGTTC 58.460 33.333 3.17 2.30 33.72 3.18
2942 3043 8.539674 CGTCGATCATAAGATACAAATTGTTCA 58.460 33.333 3.17 0.00 33.72 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 8.539544 AGCCAAAATAGGTAGCAATTAAACATT 58.460 29.630 0.00 0.00 0.00 2.71
95 96 4.705023 ACGAAGCCAAAATAGGTAGCAATT 59.295 37.500 0.00 0.00 0.00 2.32
762 779 7.294473 CAAATTTCGTGTTTTGACCTTTTTGT 58.706 30.769 0.00 0.00 35.34 2.83
840 858 1.073722 CTGGTGCACCATGGTCACT 59.926 57.895 37.66 7.02 46.46 3.41
841 859 2.629656 GCTGGTGCACCATGGTCAC 61.630 63.158 37.66 26.51 46.46 3.67
870 888 2.507992 CTTGAGAGCGACAGCCGG 60.508 66.667 0.00 0.00 46.67 6.13
893 911 4.741676 ACTAGTAATGGCACGCGTATTAAC 59.258 41.667 13.44 5.96 0.00 2.01
1031 1063 4.776647 GACGCCATTGGTTGCCGC 62.777 66.667 4.26 0.00 0.00 6.53
1032 1064 4.459331 CGACGCCATTGGTTGCCG 62.459 66.667 4.26 1.71 0.00 5.69
1033 1065 4.114997 CCGACGCCATTGGTTGCC 62.115 66.667 4.26 0.00 0.00 4.52
1034 1066 4.776647 GCCGACGCCATTGGTTGC 62.777 66.667 4.26 0.00 33.66 4.17
1035 1067 4.459331 CGCCGACGCCATTGGTTG 62.459 66.667 4.26 0.00 33.66 3.77
1261 1296 0.695347 CCTCTTCTTGAGCCCCTTGT 59.305 55.000 0.00 0.00 41.35 3.16
1420 1455 3.680920 ATCTCCTCCTTCCCCGCGT 62.681 63.158 4.92 0.00 0.00 6.01
1602 1640 2.764128 GGACGCCTCCTCCATGGA 60.764 66.667 15.27 15.27 43.86 3.41
1730 1781 3.934579 TCACATTCACTGATTCACATCCG 59.065 43.478 0.00 0.00 0.00 4.18
1732 1783 6.492007 AACTCACATTCACTGATTCACATC 57.508 37.500 0.00 0.00 0.00 3.06
1816 1868 3.577649 TCAGAGTGAAAGCCTACTTCG 57.422 47.619 0.00 0.00 34.05 3.79
1870 1922 9.243637 GTTGTACTGAAATTGCTGAAATGTTTA 57.756 29.630 0.00 0.00 0.00 2.01
1929 1981 2.612721 GGCCAAAGCGAATTCAACCAAT 60.613 45.455 6.22 0.00 41.24 3.16
1943 1995 1.147473 GGTTTGCATTTCGGCCAAAG 58.853 50.000 2.24 0.00 0.00 2.77
2037 2089 2.899256 AGGCATGCAAACCAACTGTAAT 59.101 40.909 21.36 0.00 0.00 1.89
2039 2091 1.612950 CAGGCATGCAAACCAACTGTA 59.387 47.619 21.36 0.00 0.00 2.74
2057 2109 7.625817 GCAAATTCATAGATATGCTAGGCACAG 60.626 40.741 0.00 0.00 43.04 3.66
2112 2176 9.559732 TCTGAACTTTCTTGATGATAACTTTGA 57.440 29.630 0.00 0.00 0.00 2.69
2133 2197 2.736721 CGATCGCCAGTTCTTTTCTGAA 59.263 45.455 0.26 0.00 35.20 3.02
2137 2201 0.247301 CGCGATCGCCAGTTCTTTTC 60.247 55.000 32.63 2.69 37.98 2.29
2143 2207 0.666913 ACTATACGCGATCGCCAGTT 59.333 50.000 32.63 17.78 39.84 3.16
2145 2209 1.767289 AAACTATACGCGATCGCCAG 58.233 50.000 32.63 24.47 39.84 4.85
2147 2211 2.391879 AGAAAACTATACGCGATCGCC 58.608 47.619 32.63 16.09 39.84 5.54
2149 2213 4.039703 TGGAAGAAAACTATACGCGATCG 58.960 43.478 15.93 11.69 42.43 3.69
2155 2219 3.871594 CCCTGCTGGAAGAAAACTATACG 59.128 47.826 11.88 0.00 34.07 3.06
2184 2255 3.248602 ACTGAACTTACTTGAAGCAAGCG 59.751 43.478 5.11 0.00 44.43 4.68
2188 2259 5.294306 CACTCAACTGAACTTACTTGAAGCA 59.706 40.000 0.00 0.00 38.92 3.91
2189 2260 5.294552 ACACTCAACTGAACTTACTTGAAGC 59.705 40.000 0.00 0.00 38.92 3.86
2190 2261 6.238211 CCACACTCAACTGAACTTACTTGAAG 60.238 42.308 0.00 0.00 41.37 3.02
2192 2263 5.116180 CCACACTCAACTGAACTTACTTGA 58.884 41.667 0.00 0.00 0.00 3.02
2194 2265 3.877508 GCCACACTCAACTGAACTTACTT 59.122 43.478 0.00 0.00 0.00 2.24
2195 2266 3.134804 AGCCACACTCAACTGAACTTACT 59.865 43.478 0.00 0.00 0.00 2.24
2196 2267 3.467803 AGCCACACTCAACTGAACTTAC 58.532 45.455 0.00 0.00 0.00 2.34
2197 2268 3.838244 AGCCACACTCAACTGAACTTA 57.162 42.857 0.00 0.00 0.00 2.24
2198 2269 2.717639 AGCCACACTCAACTGAACTT 57.282 45.000 0.00 0.00 0.00 2.66
2209 2282 3.507411 TCAGAGGTTAAGTAGCCACACT 58.493 45.455 0.00 0.00 0.00 3.55
2232 2305 5.006358 CAGTAATAGGAAAACGATGAACCCG 59.994 44.000 0.00 0.00 0.00 5.28
2233 2306 5.220796 GCAGTAATAGGAAAACGATGAACCC 60.221 44.000 0.00 0.00 0.00 4.11
2234 2307 5.353123 TGCAGTAATAGGAAAACGATGAACC 59.647 40.000 0.00 0.00 0.00 3.62
2235 2308 6.417191 TGCAGTAATAGGAAAACGATGAAC 57.583 37.500 0.00 0.00 0.00 3.18
2236 2309 6.597672 ACATGCAGTAATAGGAAAACGATGAA 59.402 34.615 0.00 0.00 0.00 2.57
2237 2310 6.112734 ACATGCAGTAATAGGAAAACGATGA 58.887 36.000 0.00 0.00 0.00 2.92
2238 2311 6.363577 ACATGCAGTAATAGGAAAACGATG 57.636 37.500 0.00 0.00 0.00 3.84
2239 2312 5.527582 GGACATGCAGTAATAGGAAAACGAT 59.472 40.000 0.00 0.00 0.00 3.73
2240 2313 4.873827 GGACATGCAGTAATAGGAAAACGA 59.126 41.667 0.00 0.00 0.00 3.85
2241 2314 4.634004 TGGACATGCAGTAATAGGAAAACG 59.366 41.667 0.00 0.00 0.00 3.60
2242 2315 6.699575 ATGGACATGCAGTAATAGGAAAAC 57.300 37.500 0.00 0.00 0.00 2.43
2243 2316 8.271458 TCTAATGGACATGCAGTAATAGGAAAA 58.729 33.333 0.00 0.00 0.00 2.29
2244 2317 7.715249 GTCTAATGGACATGCAGTAATAGGAAA 59.285 37.037 0.00 0.00 43.94 3.13
2245 2318 7.217200 GTCTAATGGACATGCAGTAATAGGAA 58.783 38.462 0.00 0.00 43.94 3.36
2246 2319 6.239600 GGTCTAATGGACATGCAGTAATAGGA 60.240 42.308 0.00 0.00 46.16 2.94
2247 2320 5.934625 GGTCTAATGGACATGCAGTAATAGG 59.065 44.000 0.00 0.00 46.16 2.57
2248 2321 5.934625 GGGTCTAATGGACATGCAGTAATAG 59.065 44.000 0.00 0.00 46.16 1.73
2249 2322 5.368230 TGGGTCTAATGGACATGCAGTAATA 59.632 40.000 0.00 0.00 46.16 0.98
2250 2323 4.165950 TGGGTCTAATGGACATGCAGTAAT 59.834 41.667 0.00 0.00 46.16 1.89
2251 2324 3.521531 TGGGTCTAATGGACATGCAGTAA 59.478 43.478 0.00 0.00 46.16 2.24
2252 2325 3.111484 TGGGTCTAATGGACATGCAGTA 58.889 45.455 0.00 0.00 46.16 2.74
2253 2326 1.915489 TGGGTCTAATGGACATGCAGT 59.085 47.619 0.00 0.00 46.16 4.40
2254 2327 2.171237 TCTGGGTCTAATGGACATGCAG 59.829 50.000 0.00 0.00 46.16 4.41
2255 2328 2.171237 CTCTGGGTCTAATGGACATGCA 59.829 50.000 0.00 0.00 46.16 3.96
2256 2329 2.435805 TCTCTGGGTCTAATGGACATGC 59.564 50.000 0.00 0.00 46.16 4.06
2257 2330 4.163078 AGTTCTCTGGGTCTAATGGACATG 59.837 45.833 0.00 0.00 46.16 3.21
2258 2331 4.366267 AGTTCTCTGGGTCTAATGGACAT 58.634 43.478 0.00 0.00 46.16 3.06
2259 2332 3.791320 AGTTCTCTGGGTCTAATGGACA 58.209 45.455 0.00 0.00 46.16 4.02
2260 2333 4.957327 AGTAGTTCTCTGGGTCTAATGGAC 59.043 45.833 0.00 0.00 43.79 4.02
2261 2334 4.956700 CAGTAGTTCTCTGGGTCTAATGGA 59.043 45.833 0.00 0.00 0.00 3.41
2262 2335 4.442192 GCAGTAGTTCTCTGGGTCTAATGG 60.442 50.000 10.07 0.00 31.86 3.16
2263 2336 4.404073 AGCAGTAGTTCTCTGGGTCTAATG 59.596 45.833 0.00 5.93 33.53 1.90
2264 2337 4.615513 AGCAGTAGTTCTCTGGGTCTAAT 58.384 43.478 0.00 0.00 33.98 1.73
2265 2338 4.048970 AGCAGTAGTTCTCTGGGTCTAA 57.951 45.455 0.00 0.00 33.98 2.10
2266 2339 3.741245 AGCAGTAGTTCTCTGGGTCTA 57.259 47.619 0.00 0.00 33.98 2.59
2267 2340 2.614134 AGCAGTAGTTCTCTGGGTCT 57.386 50.000 0.00 0.00 33.98 3.85
2268 2341 3.129638 CAGTAGCAGTAGTTCTCTGGGTC 59.870 52.174 0.00 0.00 33.98 4.46
2269 2342 3.093057 CAGTAGCAGTAGTTCTCTGGGT 58.907 50.000 0.00 0.00 33.98 4.51
2270 2343 3.357203 TCAGTAGCAGTAGTTCTCTGGG 58.643 50.000 0.00 0.00 33.98 4.45
2271 2344 5.825679 ACTATCAGTAGCAGTAGTTCTCTGG 59.174 44.000 0.00 0.00 33.98 3.86
2272 2345 6.935741 ACTATCAGTAGCAGTAGTTCTCTG 57.064 41.667 0.00 0.00 36.18 3.35
2286 2359 9.910267 TTGAATACAGTGGTACTACTATCAGTA 57.090 33.333 11.97 10.16 30.94 2.74
2287 2360 8.684520 GTTGAATACAGTGGTACTACTATCAGT 58.315 37.037 11.97 8.27 30.94 3.41
2288 2361 8.683615 TGTTGAATACAGTGGTACTACTATCAG 58.316 37.037 11.97 2.31 30.94 2.90
2289 2362 8.584063 TGTTGAATACAGTGGTACTACTATCA 57.416 34.615 11.97 10.94 30.94 2.15
2336 2436 6.012745 GGGGTATGAAAGGCATCAGATTATT 58.987 40.000 0.00 0.00 38.44 1.40
2368 2468 1.875009 ATCCGCATGTAGCATGACTG 58.125 50.000 12.67 2.34 46.13 3.51
2369 2469 2.630098 ACTATCCGCATGTAGCATGACT 59.370 45.455 12.67 0.00 46.13 3.41
2370 2470 3.032017 ACTATCCGCATGTAGCATGAC 57.968 47.619 12.67 4.00 46.13 3.06
2371 2471 3.554960 GGAACTATCCGCATGTAGCATGA 60.555 47.826 12.67 0.00 46.13 3.07
2372 2472 2.738846 GGAACTATCCGCATGTAGCATG 59.261 50.000 4.87 4.87 46.13 4.06
2373 2473 3.045601 GGAACTATCCGCATGTAGCAT 57.954 47.619 0.00 0.00 46.13 3.79
2374 2474 2.526304 GGAACTATCCGCATGTAGCA 57.474 50.000 0.00 0.00 46.13 3.49
2397 2497 4.692625 AGTCTTGATCTCGTGACCAAATTG 59.307 41.667 0.00 0.00 0.00 2.32
2428 2528 6.646653 TGCATCAAGCTATTAGGAGATAAACG 59.353 38.462 0.00 0.00 45.94 3.60
2429 2529 7.969536 TGCATCAAGCTATTAGGAGATAAAC 57.030 36.000 0.00 0.00 45.94 2.01
2430 2530 8.159447 ACATGCATCAAGCTATTAGGAGATAAA 58.841 33.333 0.00 0.00 45.94 1.40
2456 2556 8.500753 AGAAAATAATCCGTAGCAATGTAACA 57.499 30.769 0.00 0.00 0.00 2.41
2482 2583 6.090898 GCAAGACTGATAAAAACGAGCTCTTA 59.909 38.462 12.85 3.84 0.00 2.10
2491 2592 8.311650 TGAGACTTAGCAAGACTGATAAAAAC 57.688 34.615 5.85 0.00 33.20 2.43
2499 2600 4.683781 GTGAACTGAGACTTAGCAAGACTG 59.316 45.833 5.85 0.00 33.75 3.51
2500 2601 4.586841 AGTGAACTGAGACTTAGCAAGACT 59.413 41.667 0.00 2.60 36.25 3.24
2501 2602 4.683781 CAGTGAACTGAGACTTAGCAAGAC 59.316 45.833 4.36 0.00 46.59 3.01
2502 2603 4.876125 CAGTGAACTGAGACTTAGCAAGA 58.124 43.478 4.36 0.00 46.59 3.02
2514 2615 6.757010 GACTTAACAAAGTCTCAGTGAACTGA 59.243 38.462 12.40 12.40 44.12 3.41
2515 2616 6.910536 ACTTAACAAAGTCTCAGTGAACTG 57.089 37.500 3.98 3.98 45.08 3.16
2542 2643 9.384764 TGAGATCTCACGAATATATTATCGACT 57.615 33.333 21.67 3.77 41.96 4.18
2559 2660 5.353400 GCACTGATTTTCATGTGAGATCTCA 59.647 40.000 21.67 21.67 37.24 3.27
2560 2661 5.353400 TGCACTGATTTTCATGTGAGATCTC 59.647 40.000 16.21 16.21 31.65 2.75
2561 2662 5.250982 TGCACTGATTTTCATGTGAGATCT 58.749 37.500 0.00 0.00 31.65 2.75
2562 2663 5.556355 TGCACTGATTTTCATGTGAGATC 57.444 39.130 0.00 0.00 31.65 2.75
2563 2664 5.970317 TTGCACTGATTTTCATGTGAGAT 57.030 34.783 0.00 0.00 31.65 2.75
2564 2665 5.970317 ATTGCACTGATTTTCATGTGAGA 57.030 34.783 0.00 0.00 31.65 3.27
2565 2666 7.416154 AAAATTGCACTGATTTTCATGTGAG 57.584 32.000 2.41 0.00 32.76 3.51
2566 2667 7.789273 AAAAATTGCACTGATTTTCATGTGA 57.211 28.000 7.79 0.00 36.09 3.58
2588 2689 9.423061 CAGGAGAGAAAAAGAAAAACTGAAAAA 57.577 29.630 0.00 0.00 0.00 1.94
2589 2690 7.545615 GCAGGAGAGAAAAAGAAAAACTGAAAA 59.454 33.333 0.00 0.00 0.00 2.29
2590 2691 7.035612 GCAGGAGAGAAAAAGAAAAACTGAAA 58.964 34.615 0.00 0.00 0.00 2.69
2591 2692 6.152661 TGCAGGAGAGAAAAAGAAAAACTGAA 59.847 34.615 0.00 0.00 0.00 3.02
2592 2693 5.652014 TGCAGGAGAGAAAAAGAAAAACTGA 59.348 36.000 0.00 0.00 0.00 3.41
2593 2694 5.894807 TGCAGGAGAGAAAAAGAAAAACTG 58.105 37.500 0.00 0.00 0.00 3.16
2594 2695 6.097412 ACATGCAGGAGAGAAAAAGAAAAACT 59.903 34.615 4.84 0.00 0.00 2.66
2595 2696 6.276091 ACATGCAGGAGAGAAAAAGAAAAAC 58.724 36.000 4.84 0.00 0.00 2.43
2596 2697 6.469782 ACATGCAGGAGAGAAAAAGAAAAA 57.530 33.333 4.84 0.00 0.00 1.94
2597 2698 6.469782 AACATGCAGGAGAGAAAAAGAAAA 57.530 33.333 4.84 0.00 0.00 2.29
2598 2699 7.231317 ACATAACATGCAGGAGAGAAAAAGAAA 59.769 33.333 4.84 0.00 0.00 2.52
2599 2700 6.716628 ACATAACATGCAGGAGAGAAAAAGAA 59.283 34.615 4.84 0.00 0.00 2.52
2600 2701 6.240894 ACATAACATGCAGGAGAGAAAAAGA 58.759 36.000 4.84 0.00 0.00 2.52
2601 2702 6.149973 TGACATAACATGCAGGAGAGAAAAAG 59.850 38.462 4.84 0.00 0.00 2.27
2602 2703 6.003326 TGACATAACATGCAGGAGAGAAAAA 58.997 36.000 4.84 0.00 0.00 1.94
2603 2704 5.412594 GTGACATAACATGCAGGAGAGAAAA 59.587 40.000 4.84 0.00 0.00 2.29
2604 2705 4.937620 GTGACATAACATGCAGGAGAGAAA 59.062 41.667 4.84 0.00 0.00 2.52
2605 2706 4.223700 AGTGACATAACATGCAGGAGAGAA 59.776 41.667 4.84 0.00 0.00 2.87
2606 2707 3.771479 AGTGACATAACATGCAGGAGAGA 59.229 43.478 4.84 0.00 0.00 3.10
2607 2708 4.118410 GAGTGACATAACATGCAGGAGAG 58.882 47.826 4.84 0.00 0.00 3.20
2608 2709 3.429410 CGAGTGACATAACATGCAGGAGA 60.429 47.826 4.84 0.00 0.00 3.71
2609 2710 2.862536 CGAGTGACATAACATGCAGGAG 59.137 50.000 4.84 0.00 0.00 3.69
2610 2711 2.418609 CCGAGTGACATAACATGCAGGA 60.419 50.000 4.84 0.00 0.00 3.86
2611 2712 1.935873 CCGAGTGACATAACATGCAGG 59.064 52.381 0.00 0.00 0.00 4.85
2612 2713 2.349580 CACCGAGTGACATAACATGCAG 59.650 50.000 0.00 0.00 35.23 4.41
2613 2714 2.028567 TCACCGAGTGACATAACATGCA 60.029 45.455 3.02 0.00 37.67 3.96
2614 2715 2.616960 TCACCGAGTGACATAACATGC 58.383 47.619 3.02 0.00 37.67 4.06
2615 2716 4.327357 GTCTTCACCGAGTGACATAACATG 59.673 45.833 6.27 0.00 42.60 3.21
2616 2717 4.220821 AGTCTTCACCGAGTGACATAACAT 59.779 41.667 6.27 0.00 42.60 2.71
2617 2718 3.572682 AGTCTTCACCGAGTGACATAACA 59.427 43.478 6.27 0.00 42.60 2.41
2618 2719 4.175787 AGTCTTCACCGAGTGACATAAC 57.824 45.455 6.27 3.80 42.60 1.89
2619 2720 4.866508 AAGTCTTCACCGAGTGACATAA 57.133 40.909 6.27 0.00 42.60 1.90
2620 2721 5.008331 ACTAAGTCTTCACCGAGTGACATA 58.992 41.667 6.27 0.00 42.60 2.29
2621 2722 3.827302 ACTAAGTCTTCACCGAGTGACAT 59.173 43.478 6.27 0.00 42.60 3.06
2622 2723 3.220110 ACTAAGTCTTCACCGAGTGACA 58.780 45.455 6.27 0.00 42.60 3.58
2623 2724 3.919223 ACTAAGTCTTCACCGAGTGAC 57.081 47.619 6.27 0.00 42.60 3.67
2624 2725 6.395426 TTTAACTAAGTCTTCACCGAGTGA 57.605 37.500 3.02 3.02 41.09 3.41
2625 2726 7.091443 AGATTTAACTAAGTCTTCACCGAGTG 58.909 38.462 0.00 0.00 29.33 3.51
2626 2727 7.039923 TGAGATTTAACTAAGTCTTCACCGAGT 60.040 37.037 0.00 0.00 33.20 4.18
2627 2728 7.313646 TGAGATTTAACTAAGTCTTCACCGAG 58.686 38.462 0.00 0.00 33.20 4.63
2628 2729 7.039923 ACTGAGATTTAACTAAGTCTTCACCGA 60.040 37.037 0.00 0.00 33.20 4.69
2629 2730 7.091443 ACTGAGATTTAACTAAGTCTTCACCG 58.909 38.462 0.00 0.00 33.20 4.94
2630 2731 7.273815 CGACTGAGATTTAACTAAGTCTTCACC 59.726 40.741 0.00 0.00 42.92 4.02
2631 2732 8.021973 TCGACTGAGATTTAACTAAGTCTTCAC 58.978 37.037 0.00 0.00 42.92 3.18
2632 2733 8.021973 GTCGACTGAGATTTAACTAAGTCTTCA 58.978 37.037 8.70 0.00 42.92 3.02
2633 2734 8.238631 AGTCGACTGAGATTTAACTAAGTCTTC 58.761 37.037 19.30 0.00 42.92 2.87
2634 2735 8.024285 CAGTCGACTGAGATTTAACTAAGTCTT 58.976 37.037 36.73 0.00 46.59 3.01
2635 2736 7.531716 CAGTCGACTGAGATTTAACTAAGTCT 58.468 38.462 36.73 0.00 46.59 3.24
2636 2737 7.728580 CAGTCGACTGAGATTTAACTAAGTC 57.271 40.000 36.73 0.00 46.59 3.01
2651 2752 2.417239 GTGACTAGGTCTCAGTCGACTG 59.583 54.545 34.76 34.76 44.44 3.51
2652 2753 2.702261 GTGACTAGGTCTCAGTCGACT 58.298 52.381 13.58 13.58 44.44 4.18
2653 2754 1.394227 CGTGACTAGGTCTCAGTCGAC 59.606 57.143 7.70 7.70 44.44 4.20
2654 2755 1.723220 CGTGACTAGGTCTCAGTCGA 58.277 55.000 0.00 0.00 44.44 4.20
2655 2756 0.097325 GCGTGACTAGGTCTCAGTCG 59.903 60.000 0.00 0.00 44.44 4.18
2656 2757 0.452585 GGCGTGACTAGGTCTCAGTC 59.547 60.000 0.00 0.00 42.31 3.51
2657 2758 0.966370 GGGCGTGACTAGGTCTCAGT 60.966 60.000 0.00 0.00 33.15 3.41
2658 2759 0.681564 AGGGCGTGACTAGGTCTCAG 60.682 60.000 0.00 0.00 33.15 3.35
2659 2760 0.251653 AAGGGCGTGACTAGGTCTCA 60.252 55.000 0.00 0.00 33.15 3.27
2660 2761 0.896226 AAAGGGCGTGACTAGGTCTC 59.104 55.000 0.00 0.00 33.15 3.36
2661 2762 1.349067 AAAAGGGCGTGACTAGGTCT 58.651 50.000 0.00 0.00 33.15 3.85
2662 2763 2.180432 AAAAAGGGCGTGACTAGGTC 57.820 50.000 0.00 0.00 0.00 3.85
2699 2800 9.411189 ACCAAGAAAAACTACACTAAATGGTAA 57.589 29.630 0.00 0.00 34.71 2.85
2700 2801 8.983702 ACCAAGAAAAACTACACTAAATGGTA 57.016 30.769 0.00 0.00 34.71 3.25
2701 2802 7.891498 ACCAAGAAAAACTACACTAAATGGT 57.109 32.000 0.00 0.00 0.00 3.55
2702 2803 8.410141 TCAACCAAGAAAAACTACACTAAATGG 58.590 33.333 0.00 0.00 0.00 3.16
2703 2804 9.450807 CTCAACCAAGAAAAACTACACTAAATG 57.549 33.333 0.00 0.00 0.00 2.32
2704 2805 9.403583 TCTCAACCAAGAAAAACTACACTAAAT 57.596 29.630 0.00 0.00 0.00 1.40
2705 2806 8.795842 TCTCAACCAAGAAAAACTACACTAAA 57.204 30.769 0.00 0.00 0.00 1.85
2706 2807 8.836413 CATCTCAACCAAGAAAAACTACACTAA 58.164 33.333 0.00 0.00 0.00 2.24
2707 2808 8.208224 TCATCTCAACCAAGAAAAACTACACTA 58.792 33.333 0.00 0.00 0.00 2.74
2708 2809 7.054124 TCATCTCAACCAAGAAAAACTACACT 58.946 34.615 0.00 0.00 0.00 3.55
2709 2810 7.259290 TCATCTCAACCAAGAAAAACTACAC 57.741 36.000 0.00 0.00 0.00 2.90
2710 2811 7.873719 TTCATCTCAACCAAGAAAAACTACA 57.126 32.000 0.00 0.00 0.00 2.74
2711 2812 7.379797 GCTTTCATCTCAACCAAGAAAAACTAC 59.620 37.037 0.00 0.00 0.00 2.73
2712 2813 7.425606 GCTTTCATCTCAACCAAGAAAAACTA 58.574 34.615 0.00 0.00 0.00 2.24
2713 2814 6.276091 GCTTTCATCTCAACCAAGAAAAACT 58.724 36.000 0.00 0.00 0.00 2.66
2714 2815 5.173854 CGCTTTCATCTCAACCAAGAAAAAC 59.826 40.000 0.00 0.00 0.00 2.43
2715 2816 5.280945 CGCTTTCATCTCAACCAAGAAAAA 58.719 37.500 0.00 0.00 0.00 1.94
2716 2817 4.261572 CCGCTTTCATCTCAACCAAGAAAA 60.262 41.667 0.00 0.00 0.00 2.29
2717 2818 3.253188 CCGCTTTCATCTCAACCAAGAAA 59.747 43.478 0.00 0.00 0.00 2.52
2718 2819 2.813754 CCGCTTTCATCTCAACCAAGAA 59.186 45.455 0.00 0.00 0.00 2.52
2719 2820 2.426522 CCGCTTTCATCTCAACCAAGA 58.573 47.619 0.00 0.00 0.00 3.02
2720 2821 1.135575 GCCGCTTTCATCTCAACCAAG 60.136 52.381 0.00 0.00 0.00 3.61
2721 2822 0.881118 GCCGCTTTCATCTCAACCAA 59.119 50.000 0.00 0.00 0.00 3.67
2722 2823 0.960364 GGCCGCTTTCATCTCAACCA 60.960 55.000 0.00 0.00 0.00 3.67
2723 2824 1.657751 GGGCCGCTTTCATCTCAACC 61.658 60.000 0.00 0.00 0.00 3.77
2724 2825 0.678048 AGGGCCGCTTTCATCTCAAC 60.678 55.000 0.00 0.00 0.00 3.18
2725 2826 0.038166 AAGGGCCGCTTTCATCTCAA 59.962 50.000 0.00 0.00 0.00 3.02
2726 2827 0.677731 CAAGGGCCGCTTTCATCTCA 60.678 55.000 0.00 0.00 0.00 3.27
2727 2828 0.392998 TCAAGGGCCGCTTTCATCTC 60.393 55.000 0.00 0.00 0.00 2.75
2728 2829 0.257039 ATCAAGGGCCGCTTTCATCT 59.743 50.000 0.00 0.00 0.00 2.90
2729 2830 1.106285 AATCAAGGGCCGCTTTCATC 58.894 50.000 0.00 0.00 0.00 2.92
2730 2831 0.819582 CAATCAAGGGCCGCTTTCAT 59.180 50.000 0.00 0.00 0.00 2.57
2731 2832 1.250154 CCAATCAAGGGCCGCTTTCA 61.250 55.000 0.00 0.00 0.00 2.69
2732 2833 1.250840 ACCAATCAAGGGCCGCTTTC 61.251 55.000 0.00 0.00 0.00 2.62
2733 2834 0.831711 AACCAATCAAGGGCCGCTTT 60.832 50.000 0.00 0.00 0.00 3.51
2734 2835 1.228862 AACCAATCAAGGGCCGCTT 60.229 52.632 0.00 0.00 0.00 4.68
2735 2836 1.678970 GAACCAATCAAGGGCCGCT 60.679 57.895 0.00 0.00 0.00 5.52
2736 2837 2.885113 GAACCAATCAAGGGCCGC 59.115 61.111 0.00 0.00 0.00 6.53
2737 2838 1.674322 ACGAACCAATCAAGGGCCG 60.674 57.895 0.00 0.00 34.98 6.13
2738 2839 0.893727 ACACGAACCAATCAAGGGCC 60.894 55.000 0.00 0.00 0.00 5.80
2739 2840 1.467342 GTACACGAACCAATCAAGGGC 59.533 52.381 0.00 0.00 0.00 5.19
2740 2841 3.053831 AGTACACGAACCAATCAAGGG 57.946 47.619 0.00 0.00 0.00 3.95
2741 2842 5.121768 CCTTAAGTACACGAACCAATCAAGG 59.878 44.000 0.97 0.00 0.00 3.61
2742 2843 5.390567 GCCTTAAGTACACGAACCAATCAAG 60.391 44.000 0.97 0.00 0.00 3.02
2743 2844 4.453136 GCCTTAAGTACACGAACCAATCAA 59.547 41.667 0.97 0.00 0.00 2.57
2744 2845 3.998341 GCCTTAAGTACACGAACCAATCA 59.002 43.478 0.97 0.00 0.00 2.57
2745 2846 3.998341 TGCCTTAAGTACACGAACCAATC 59.002 43.478 0.97 0.00 0.00 2.67
2746 2847 4.010667 TGCCTTAAGTACACGAACCAAT 57.989 40.909 0.97 0.00 0.00 3.16
2747 2848 3.472283 TGCCTTAAGTACACGAACCAA 57.528 42.857 0.97 0.00 0.00 3.67
2748 2849 3.259876 AGATGCCTTAAGTACACGAACCA 59.740 43.478 0.97 0.00 0.00 3.67
2749 2850 3.858247 AGATGCCTTAAGTACACGAACC 58.142 45.455 0.97 0.00 0.00 3.62
2750 2851 5.404946 TGTAGATGCCTTAAGTACACGAAC 58.595 41.667 0.97 0.41 0.00 3.95
2751 2852 5.648178 TGTAGATGCCTTAAGTACACGAA 57.352 39.130 0.97 0.00 0.00 3.85
2752 2853 5.404946 GTTGTAGATGCCTTAAGTACACGA 58.595 41.667 0.97 0.00 0.00 4.35
2753 2854 4.565564 GGTTGTAGATGCCTTAAGTACACG 59.434 45.833 0.97 0.00 0.00 4.49
2754 2855 4.565564 CGGTTGTAGATGCCTTAAGTACAC 59.434 45.833 0.97 0.00 0.00 2.90
2755 2856 4.382254 CCGGTTGTAGATGCCTTAAGTACA 60.382 45.833 0.97 0.48 0.00 2.90
2756 2857 4.117685 CCGGTTGTAGATGCCTTAAGTAC 58.882 47.826 0.97 0.00 0.00 2.73
2757 2858 4.025360 TCCGGTTGTAGATGCCTTAAGTA 58.975 43.478 0.00 0.00 0.00 2.24
2758 2859 2.835764 TCCGGTTGTAGATGCCTTAAGT 59.164 45.455 0.00 0.00 0.00 2.24
2759 2860 3.118738 AGTCCGGTTGTAGATGCCTTAAG 60.119 47.826 0.00 0.00 0.00 1.85
2760 2861 2.835764 AGTCCGGTTGTAGATGCCTTAA 59.164 45.455 0.00 0.00 0.00 1.85
2761 2862 2.463752 AGTCCGGTTGTAGATGCCTTA 58.536 47.619 0.00 0.00 0.00 2.69
2762 2863 1.276622 AGTCCGGTTGTAGATGCCTT 58.723 50.000 0.00 0.00 0.00 4.35
2763 2864 1.066143 CAAGTCCGGTTGTAGATGCCT 60.066 52.381 0.00 0.00 0.00 4.75
2764 2865 1.369625 CAAGTCCGGTTGTAGATGCC 58.630 55.000 0.00 0.00 0.00 4.40
2765 2866 1.369625 CCAAGTCCGGTTGTAGATGC 58.630 55.000 0.00 0.00 0.00 3.91
2766 2867 1.338674 TGCCAAGTCCGGTTGTAGATG 60.339 52.381 0.00 0.00 0.00 2.90
2767 2868 0.981183 TGCCAAGTCCGGTTGTAGAT 59.019 50.000 0.00 0.00 0.00 1.98
2768 2869 0.759959 TTGCCAAGTCCGGTTGTAGA 59.240 50.000 0.00 0.00 0.00 2.59
2769 2870 1.600023 TTTGCCAAGTCCGGTTGTAG 58.400 50.000 0.00 0.00 0.00 2.74
2770 2871 2.156098 GATTTGCCAAGTCCGGTTGTA 58.844 47.619 0.00 0.00 0.00 2.41
2771 2872 0.958822 GATTTGCCAAGTCCGGTTGT 59.041 50.000 0.00 0.00 0.00 3.32
2772 2873 0.243636 GGATTTGCCAAGTCCGGTTG 59.756 55.000 2.98 0.00 36.34 3.77
2773 2874 2.653557 GGATTTGCCAAGTCCGGTT 58.346 52.632 2.98 0.00 36.34 4.44
2774 2875 4.415783 GGATTTGCCAAGTCCGGT 57.584 55.556 2.98 0.00 36.34 5.28
2777 2878 0.526211 GGAACGGATTTGCCAAGTCC 59.474 55.000 8.84 8.84 35.94 3.85
2778 2879 0.526211 GGGAACGGATTTGCCAAGTC 59.474 55.000 0.00 0.00 45.16 3.01
2779 2880 2.653557 GGGAACGGATTTGCCAAGT 58.346 52.632 0.00 0.00 45.16 3.16
2783 2884 2.876550 GTGTATAGGGAACGGATTTGCC 59.123 50.000 0.00 0.00 46.20 4.52
2784 2885 2.876550 GGTGTATAGGGAACGGATTTGC 59.123 50.000 0.00 0.00 0.00 3.68
2785 2886 3.473625 GGGTGTATAGGGAACGGATTTG 58.526 50.000 0.00 0.00 0.00 2.32
2786 2887 2.103601 CGGGTGTATAGGGAACGGATTT 59.896 50.000 0.00 0.00 0.00 2.17
2787 2888 1.690352 CGGGTGTATAGGGAACGGATT 59.310 52.381 0.00 0.00 0.00 3.01
2788 2889 1.335145 CGGGTGTATAGGGAACGGAT 58.665 55.000 0.00 0.00 0.00 4.18
2789 2890 1.394266 GCGGGTGTATAGGGAACGGA 61.394 60.000 0.00 0.00 0.00 4.69
2790 2891 1.068585 GCGGGTGTATAGGGAACGG 59.931 63.158 0.00 0.00 0.00 4.44
2791 2892 0.249322 CTGCGGGTGTATAGGGAACG 60.249 60.000 0.00 0.00 0.00 3.95
2792 2893 0.106149 CCTGCGGGTGTATAGGGAAC 59.894 60.000 2.29 0.00 0.00 3.62
2793 2894 1.692173 GCCTGCGGGTGTATAGGGAA 61.692 60.000 14.55 0.00 34.45 3.97
2794 2895 2.138179 GCCTGCGGGTGTATAGGGA 61.138 63.158 14.55 0.00 34.45 4.20
2795 2896 2.426023 GCCTGCGGGTGTATAGGG 59.574 66.667 14.55 0.00 34.45 3.53
2796 2897 2.029073 CGCCTGCGGGTGTATAGG 59.971 66.667 17.50 0.00 38.25 2.57
2797 2898 2.661866 GCGCCTGCGGGTGTATAG 60.662 66.667 25.67 6.04 44.44 1.31
2808 2909 1.835483 GATATGCTTGGACGCGCCTG 61.835 60.000 18.14 12.61 37.63 4.85
2809 2910 1.595382 GATATGCTTGGACGCGCCT 60.595 57.895 18.14 0.00 37.63 5.52
2810 2911 2.607892 GGATATGCTTGGACGCGCC 61.608 63.158 5.73 9.63 37.10 6.53
2811 2912 1.887242 TGGATATGCTTGGACGCGC 60.887 57.895 5.73 0.00 0.00 6.86
2812 2913 1.821241 CGTGGATATGCTTGGACGCG 61.821 60.000 3.53 3.53 0.00 6.01
2813 2914 1.498865 CCGTGGATATGCTTGGACGC 61.499 60.000 0.00 0.00 0.00 5.19
2814 2915 0.104120 TCCGTGGATATGCTTGGACG 59.896 55.000 4.35 1.67 0.00 4.79
2815 2916 1.134521 TGTCCGTGGATATGCTTGGAC 60.135 52.381 22.55 22.55 44.75 4.02
2816 2917 1.199615 TGTCCGTGGATATGCTTGGA 58.800 50.000 4.35 4.35 0.00 3.53
2817 2918 2.260844 ATGTCCGTGGATATGCTTGG 57.739 50.000 0.00 0.00 0.00 3.61
2818 2919 2.287188 GCAATGTCCGTGGATATGCTTG 60.287 50.000 13.14 5.20 0.00 4.01
2819 2920 1.949525 GCAATGTCCGTGGATATGCTT 59.050 47.619 13.14 0.00 0.00 3.91
2820 2921 1.597742 GCAATGTCCGTGGATATGCT 58.402 50.000 13.14 0.00 0.00 3.79
2821 2922 0.593128 GGCAATGTCCGTGGATATGC 59.407 55.000 12.40 12.40 0.00 3.14
2822 2923 1.238439 GGGCAATGTCCGTGGATATG 58.762 55.000 0.00 0.00 0.00 1.78
2823 2924 0.250295 CGGGCAATGTCCGTGGATAT 60.250 55.000 19.30 0.00 46.58 1.63
2824 2925 1.145156 CGGGCAATGTCCGTGGATA 59.855 57.895 19.30 0.00 46.58 2.59
2825 2926 2.124736 CGGGCAATGTCCGTGGAT 60.125 61.111 19.30 0.00 46.58 3.41
2839 2940 3.252284 ATATGAGGGGCTGGCGGG 61.252 66.667 0.00 0.00 0.00 6.13
2840 2941 2.033141 CATATGAGGGGCTGGCGG 59.967 66.667 0.00 0.00 0.00 6.13
2841 2942 2.033141 CCATATGAGGGGCTGGCG 59.967 66.667 3.65 0.00 0.00 5.69
2842 2943 2.437897 CCCATATGAGGGGCTGGC 59.562 66.667 3.65 0.00 45.60 4.85
2849 2950 1.299541 GTGCGACAACCCATATGAGG 58.700 55.000 3.65 6.49 0.00 3.86
2850 2951 2.022764 TGTGCGACAACCCATATGAG 57.977 50.000 3.65 0.00 0.00 2.90
2851 2952 2.170397 AGATGTGCGACAACCCATATGA 59.830 45.455 3.65 0.00 0.00 2.15
2852 2953 2.564771 AGATGTGCGACAACCCATATG 58.435 47.619 0.00 0.00 0.00 1.78
2853 2954 3.133901 TGTAGATGTGCGACAACCCATAT 59.866 43.478 0.00 0.00 0.00 1.78
2854 2955 2.498078 TGTAGATGTGCGACAACCCATA 59.502 45.455 0.00 0.00 0.00 2.74
2855 2956 1.277842 TGTAGATGTGCGACAACCCAT 59.722 47.619 0.00 0.00 0.00 4.00
2856 2957 0.682292 TGTAGATGTGCGACAACCCA 59.318 50.000 0.00 0.00 0.00 4.51
2857 2958 2.024176 ATGTAGATGTGCGACAACCC 57.976 50.000 0.00 0.00 35.71 4.11
2858 2959 2.864343 GGTATGTAGATGTGCGACAACC 59.136 50.000 0.00 0.00 35.71 3.77
2859 2960 3.782046 AGGTATGTAGATGTGCGACAAC 58.218 45.455 0.00 0.00 35.71 3.32
2860 2961 3.445805 TGAGGTATGTAGATGTGCGACAA 59.554 43.478 0.00 0.00 35.71 3.18
2861 2962 3.020984 TGAGGTATGTAGATGTGCGACA 58.979 45.455 0.00 0.00 36.54 4.35
2862 2963 3.710326 TGAGGTATGTAGATGTGCGAC 57.290 47.619 0.00 0.00 0.00 5.19
2863 2964 4.729227 TTTGAGGTATGTAGATGTGCGA 57.271 40.909 0.00 0.00 0.00 5.10
2864 2965 4.319046 GCATTTGAGGTATGTAGATGTGCG 60.319 45.833 0.00 0.00 0.00 5.34
2865 2966 4.319046 CGCATTTGAGGTATGTAGATGTGC 60.319 45.833 0.00 0.00 0.00 4.57
2866 2967 4.212004 CCGCATTTGAGGTATGTAGATGTG 59.788 45.833 0.00 0.00 0.00 3.21
2867 2968 4.100963 TCCGCATTTGAGGTATGTAGATGT 59.899 41.667 0.14 0.00 36.33 3.06
2868 2969 4.631131 TCCGCATTTGAGGTATGTAGATG 58.369 43.478 0.14 0.00 36.33 2.90
2869 2970 4.800914 GCTCCGCATTTGAGGTATGTAGAT 60.801 45.833 0.14 0.00 36.33 1.98
2870 2971 3.492656 GCTCCGCATTTGAGGTATGTAGA 60.493 47.826 0.14 0.00 36.33 2.59
2871 2972 2.802816 GCTCCGCATTTGAGGTATGTAG 59.197 50.000 0.14 0.00 36.33 2.74
2872 2973 2.484770 GGCTCCGCATTTGAGGTATGTA 60.485 50.000 0.14 0.00 36.33 2.29
2873 2974 1.668419 GCTCCGCATTTGAGGTATGT 58.332 50.000 0.14 0.00 36.33 2.29
2874 2975 0.947244 GGCTCCGCATTTGAGGTATG 59.053 55.000 0.14 0.00 36.33 2.39
2875 2976 0.839946 AGGCTCCGCATTTGAGGTAT 59.160 50.000 0.14 0.00 36.33 2.73
2876 2977 0.178068 GAGGCTCCGCATTTGAGGTA 59.822 55.000 2.15 0.00 36.33 3.08
2877 2978 1.078143 GAGGCTCCGCATTTGAGGT 60.078 57.895 2.15 0.00 36.33 3.85
2878 2979 0.677731 TTGAGGCTCCGCATTTGAGG 60.678 55.000 12.86 0.00 36.25 3.86
2879 2980 1.167851 TTTGAGGCTCCGCATTTGAG 58.832 50.000 12.86 0.00 0.00 3.02
2880 2981 1.745087 GATTTGAGGCTCCGCATTTGA 59.255 47.619 12.86 0.00 0.00 2.69
2881 2982 1.202336 GGATTTGAGGCTCCGCATTTG 60.202 52.381 12.86 0.00 0.00 2.32
2882 2983 1.106285 GGATTTGAGGCTCCGCATTT 58.894 50.000 12.86 0.00 0.00 2.32
2883 2984 0.034186 TGGATTTGAGGCTCCGCATT 60.034 50.000 12.86 0.00 34.05 3.56
2884 2985 0.184451 ATGGATTTGAGGCTCCGCAT 59.816 50.000 12.86 0.66 34.05 4.73
2885 2986 0.749091 CATGGATTTGAGGCTCCGCA 60.749 55.000 12.86 0.00 34.05 5.69
2886 2987 2.028130 CATGGATTTGAGGCTCCGC 58.972 57.895 12.86 0.00 34.05 5.54
2887 2988 0.749091 TGCATGGATTTGAGGCTCCG 60.749 55.000 12.86 0.00 34.05 4.63
2888 2989 1.477553 TTGCATGGATTTGAGGCTCC 58.522 50.000 12.86 0.00 0.00 4.70
2889 2990 2.035576 GGATTGCATGGATTTGAGGCTC 59.964 50.000 7.79 7.79 0.00 4.70
2890 2991 2.037144 GGATTGCATGGATTTGAGGCT 58.963 47.619 0.00 0.00 0.00 4.58
2891 2992 1.758280 TGGATTGCATGGATTTGAGGC 59.242 47.619 0.00 0.00 0.00 4.70
2892 2993 3.990092 CATGGATTGCATGGATTTGAGG 58.010 45.455 10.08 0.00 0.00 3.86
2905 3006 1.289276 TGATCGACGTGCATGGATTG 58.711 50.000 11.36 0.00 0.00 2.67
2906 3007 2.245159 ATGATCGACGTGCATGGATT 57.755 45.000 11.36 0.00 0.00 3.01
2907 3008 3.005791 TCTTATGATCGACGTGCATGGAT 59.994 43.478 11.36 4.08 0.00 3.41
2908 3009 2.360801 TCTTATGATCGACGTGCATGGA 59.639 45.455 11.36 0.00 0.00 3.41
2909 3010 2.742774 TCTTATGATCGACGTGCATGG 58.257 47.619 11.36 0.00 0.00 3.66
2910 3011 4.917415 TGTATCTTATGATCGACGTGCATG 59.083 41.667 3.82 3.82 34.32 4.06
2911 3012 5.121221 TGTATCTTATGATCGACGTGCAT 57.879 39.130 0.00 9.41 34.32 3.96
2912 3013 4.561735 TGTATCTTATGATCGACGTGCA 57.438 40.909 0.00 0.00 34.32 4.57
2913 3014 5.883328 TTTGTATCTTATGATCGACGTGC 57.117 39.130 0.00 0.00 34.32 5.34
2914 3015 7.841486 ACAATTTGTATCTTATGATCGACGTG 58.159 34.615 0.00 0.00 34.32 4.49
2915 3016 8.420374 AACAATTTGTATCTTATGATCGACGT 57.580 30.769 1.76 0.00 34.32 4.34
2916 3017 8.539674 TGAACAATTTGTATCTTATGATCGACG 58.460 33.333 1.76 0.00 34.32 5.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.