Multiple sequence alignment - TraesCS4B01G322000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G322000 chr4B 100.000 5983 0 0 1 5983 612842085 612848067 0.000000e+00 11049.0
1 TraesCS4B01G322000 chr4B 91.339 127 8 3 93 217 39754669 39754544 2.870000e-38 171.0
2 TraesCS4B01G322000 chr4D 93.748 5342 193 59 410 5658 482942516 482947809 0.000000e+00 7884.0
3 TraesCS4B01G322000 chr4D 92.063 126 7 3 97 219 97930506 97930631 2.220000e-39 174.0
4 TraesCS4B01G322000 chr4D 90.000 100 4 4 233 331 482942333 482942427 2.260000e-24 124.0
5 TraesCS4B01G322000 chr4D 90.000 60 3 3 3 59 97930506 97930565 2.310000e-09 75.0
6 TraesCS4B01G322000 chr5A 94.025 2477 89 22 3226 5658 659714146 659711685 0.000000e+00 3699.0
7 TraesCS4B01G322000 chr5A 96.816 1633 43 5 1585 3212 659715867 659714239 0.000000e+00 2719.0
8 TraesCS4B01G322000 chr5A 89.859 710 39 19 865 1557 659716690 659715997 0.000000e+00 881.0
9 TraesCS4B01G322000 chr5A 84.760 584 48 18 229 790 659717287 659716723 1.130000e-151 547.0
10 TraesCS4B01G322000 chr5A 90.000 60 3 3 3 59 158935325 158935384 2.310000e-09 75.0
11 TraesCS4B01G322000 chr5A 90.244 41 3 1 65 104 390569355 390569315 1.100000e-02 52.8
12 TraesCS4B01G322000 chr1B 88.716 257 27 2 5728 5983 237037581 237037326 4.500000e-81 313.0
13 TraesCS4B01G322000 chr1B 87.938 257 29 2 5728 5983 575164071 575163816 9.750000e-78 302.0
14 TraesCS4B01G322000 chr5B 88.583 254 29 0 5728 5981 278327124 278326871 5.820000e-80 309.0
15 TraesCS4B01G322000 chr5B 87.786 262 32 0 5722 5983 221558157 221558418 2.090000e-79 307.0
16 TraesCS4B01G322000 chr5B 92.683 123 8 1 104 225 71057920 71057798 6.160000e-40 176.0
17 TraesCS4B01G322000 chr5B 90.476 63 3 3 3 62 315815401 315815463 4.970000e-11 80.5
18 TraesCS4B01G322000 chr5B 90.244 41 3 1 65 104 352127138 352127178 1.100000e-02 52.8
19 TraesCS4B01G322000 chr2B 87.879 264 27 3 5724 5983 43855092 43855354 7.530000e-79 305.0
20 TraesCS4B01G322000 chr2B 87.302 63 3 3 47 104 744867028 744867090 3.870000e-07 67.6
21 TraesCS4B01G322000 chr2B 87.931 58 4 3 48 104 744847328 744847383 1.390000e-06 65.8
22 TraesCS4B01G322000 chr2B 90.244 41 3 1 65 104 6221367 6221327 1.100000e-02 52.8
23 TraesCS4B01G322000 chr7B 87.645 259 29 1 5728 5983 474640137 474640395 1.260000e-76 298.0
24 TraesCS4B01G322000 chr7B 87.549 257 30 2 5728 5983 387390515 387390770 4.530000e-76 296.0
25 TraesCS4B01G322000 chr7B 86.842 266 32 1 5721 5983 474581369 474581634 1.630000e-75 294.0
26 TraesCS4B01G322000 chr7B 88.636 44 4 1 65 107 742473171 742473128 1.100000e-02 52.8
27 TraesCS4B01G322000 chr6B 87.597 258 29 3 5727 5983 513384945 513384690 4.530000e-76 296.0
28 TraesCS4B01G322000 chr2D 91.473 129 9 2 104 230 24312308 24312180 6.160000e-40 176.0
29 TraesCS4B01G322000 chr2D 93.333 120 6 2 104 221 196347377 196347496 6.160000e-40 176.0
30 TraesCS4B01G322000 chr2D 91.935 124 8 2 104 225 260128037 260127914 7.970000e-39 172.0
31 TraesCS4B01G322000 chr2D 85.714 56 6 2 50 104 609914745 609914799 2.330000e-04 58.4
32 TraesCS4B01G322000 chr2D 85.714 56 6 2 50 104 609985494 609985548 2.330000e-04 58.4
33 TraesCS4B01G322000 chr6A 91.935 124 8 2 104 225 494159989 494160112 7.970000e-39 172.0
34 TraesCS4B01G322000 chr3D 91.935 124 8 2 104 225 457329563 457329440 7.970000e-39 172.0
35 TraesCS4B01G322000 chr3D 91.667 60 3 2 3 61 1663042 1663100 1.380000e-11 82.4
36 TraesCS4B01G322000 chr2A 88.276 145 9 8 88 226 365820400 365820542 3.710000e-37 167.0
37 TraesCS4B01G322000 chr2A 90.625 64 3 3 10 70 58153074 58153011 1.380000e-11 82.4
38 TraesCS4B01G322000 chr2A 89.062 64 4 3 10 70 6999328 6999391 6.430000e-10 76.8
39 TraesCS4B01G322000 chr6D 91.045 67 2 4 3 65 177866012 177865946 2.970000e-13 87.9
40 TraesCS4B01G322000 chr6D 87.755 49 3 3 58 103 111433277 111433325 3.000000e-03 54.7
41 TraesCS4B01G322000 chrUn 86.765 68 6 3 6 70 60928388 60928321 8.320000e-09 73.1
42 TraesCS4B01G322000 chr7D 86.765 68 6 3 6 70 596074607 596074540 8.320000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G322000 chr4B 612842085 612848067 5982 False 11049.0 11049 100.000 1 5983 1 chr4B.!!$F1 5982
1 TraesCS4B01G322000 chr4D 482942333 482947809 5476 False 4004.0 7884 91.874 233 5658 2 chr4D.!!$F2 5425
2 TraesCS4B01G322000 chr5A 659711685 659717287 5602 True 1961.5 3699 91.365 229 5658 4 chr5A.!!$R2 5429

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
751 809 0.104120 GTTTTGGCGTCTGGGCTTTT 59.896 50.000 0.00 0.00 42.84 2.27 F
1128 1201 0.433492 ACGAAAACGATCGACTTGCG 59.567 50.000 24.34 24.13 45.48 4.85 F
1823 2021 0.455633 CTTTCGCTTGCATGCACTCC 60.456 55.000 22.58 10.55 0.00 3.85 F
2364 2562 1.073284 TCCCCAGTTAAGTGGTTCAGC 59.927 52.381 24.61 0.00 35.60 4.26 F
3335 3615 2.383338 ACAAGGTCCAATTGAAGGGGAT 59.617 45.455 7.12 0.00 32.43 3.85 F
3662 3942 4.425520 TGGTCAACAAATCGGTTTTTCAC 58.574 39.130 0.00 0.00 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2494 2692 0.318441 CAAGCCAACTCGGAGTCTCA 59.682 55.000 11.71 0.0 36.56 3.27 R
2769 2967 6.428771 TCACCTTTTCCCTTAACATACTTTCG 59.571 38.462 0.00 0.0 0.00 3.46 R
3335 3615 4.420206 TGGTCTCTTCCTGATTCTCTTCA 58.580 43.478 0.00 0.0 0.00 3.02 R
4082 4362 0.684535 TGTGGGCTCGATGAGTTTCA 59.315 50.000 0.00 0.0 31.39 2.69 R
4191 4474 1.477700 GCCATTGATGCCAGCAAACTA 59.522 47.619 0.00 0.0 0.00 2.24 R
5389 5695 0.246360 TCTCGACATTGCCGTCATGT 59.754 50.000 0.00 0.0 35.54 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.836864 ATACTACATATGAAGCAAAATGAGTGA 57.163 29.630 10.38 0.00 0.00 3.41
34 35 8.565896 ACTACATATGAAGCAAAATGAGTGAA 57.434 30.769 10.38 0.00 0.00 3.18
35 36 9.182214 ACTACATATGAAGCAAAATGAGTGAAT 57.818 29.630 10.38 0.00 0.00 2.57
36 37 9.661187 CTACATATGAAGCAAAATGAGTGAATC 57.339 33.333 10.38 0.00 0.00 2.52
37 38 8.289939 ACATATGAAGCAAAATGAGTGAATCT 57.710 30.769 10.38 0.00 0.00 2.40
38 39 9.399797 ACATATGAAGCAAAATGAGTGAATCTA 57.600 29.630 10.38 0.00 0.00 1.98
39 40 9.661187 CATATGAAGCAAAATGAGTGAATCTAC 57.339 33.333 0.00 0.00 0.00 2.59
40 41 7.692460 ATGAAGCAAAATGAGTGAATCTACA 57.308 32.000 0.00 0.00 0.00 2.74
41 42 7.692460 TGAAGCAAAATGAGTGAATCTACAT 57.308 32.000 0.00 0.00 0.00 2.29
42 43 7.755591 TGAAGCAAAATGAGTGAATCTACATC 58.244 34.615 0.00 0.00 0.00 3.06
43 44 7.391275 TGAAGCAAAATGAGTGAATCTACATCA 59.609 33.333 0.00 0.00 0.00 3.07
44 45 7.692460 AGCAAAATGAGTGAATCTACATCAA 57.308 32.000 0.00 0.00 0.00 2.57
45 46 8.114331 AGCAAAATGAGTGAATCTACATCAAA 57.886 30.769 0.00 0.00 0.00 2.69
46 47 8.579006 AGCAAAATGAGTGAATCTACATCAAAA 58.421 29.630 0.00 0.00 0.00 2.44
47 48 9.362539 GCAAAATGAGTGAATCTACATCAAAAT 57.637 29.630 0.00 0.00 0.00 1.82
91 92 9.787435 ATGTACAACCTTATGAAAAAGTAGACA 57.213 29.630 0.00 0.00 0.00 3.41
92 93 9.787435 TGTACAACCTTATGAAAAAGTAGACAT 57.213 29.630 0.00 0.00 0.00 3.06
94 95 8.918202 ACAACCTTATGAAAAAGTAGACATCA 57.082 30.769 0.00 0.00 0.00 3.07
95 96 9.349713 ACAACCTTATGAAAAAGTAGACATCAA 57.650 29.630 0.00 0.00 0.00 2.57
127 128 9.836864 ATACTACATATGAAGCAAAATGAGTGA 57.163 29.630 10.38 0.00 0.00 3.41
128 129 8.565896 ACTACATATGAAGCAAAATGAGTGAA 57.434 30.769 10.38 0.00 0.00 3.18
129 130 8.454106 ACTACATATGAAGCAAAATGAGTGAAC 58.546 33.333 10.38 0.00 0.00 3.18
130 131 6.624423 ACATATGAAGCAAAATGAGTGAACC 58.376 36.000 10.38 0.00 0.00 3.62
131 132 6.435277 ACATATGAAGCAAAATGAGTGAACCT 59.565 34.615 10.38 0.00 0.00 3.50
132 133 7.611467 ACATATGAAGCAAAATGAGTGAACCTA 59.389 33.333 10.38 0.00 0.00 3.08
133 134 5.689383 TGAAGCAAAATGAGTGAACCTAC 57.311 39.130 0.00 0.00 0.00 3.18
134 135 5.129634 TGAAGCAAAATGAGTGAACCTACA 58.870 37.500 0.00 0.00 0.00 2.74
135 136 5.008613 TGAAGCAAAATGAGTGAACCTACAC 59.991 40.000 0.00 0.00 40.60 2.90
146 147 6.274157 AGTGAACCTACACTCTGAAGTATG 57.726 41.667 0.00 0.00 46.36 2.39
147 148 5.775701 AGTGAACCTACACTCTGAAGTATGT 59.224 40.000 0.00 0.00 46.36 2.29
148 149 6.071840 AGTGAACCTACACTCTGAAGTATGTC 60.072 42.308 0.00 0.00 46.36 3.06
149 150 6.010850 TGAACCTACACTCTGAAGTATGTCT 58.989 40.000 0.00 0.00 33.25 3.41
150 151 7.120873 GTGAACCTACACTCTGAAGTATGTCTA 59.879 40.741 0.00 0.00 37.73 2.59
151 152 7.834681 TGAACCTACACTCTGAAGTATGTCTAT 59.165 37.037 0.00 0.00 33.25 1.98
152 153 9.339850 GAACCTACACTCTGAAGTATGTCTATA 57.660 37.037 0.00 0.00 33.25 1.31
153 154 9.869667 AACCTACACTCTGAAGTATGTCTATAT 57.130 33.333 0.00 0.00 33.25 0.86
160 161 9.168451 ACTCTGAAGTATGTCTATATACATCCG 57.832 37.037 7.00 0.00 40.52 4.18
161 162 9.168451 CTCTGAAGTATGTCTATATACATCCGT 57.832 37.037 7.00 0.00 40.52 4.69
167 168 9.121658 AGTATGTCTATATACATCCGTATGTGG 57.878 37.037 3.56 0.00 45.99 4.17
168 169 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
170 171 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
171 172 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
172 173 9.605275 GTCTATATACATCCGTATGTGGTAGTA 57.395 37.037 3.56 0.00 45.99 1.82
173 174 9.605275 TCTATATACATCCGTATGTGGTAGTAC 57.395 37.037 3.56 0.00 45.99 2.73
174 175 9.387257 CTATATACATCCGTATGTGGTAGTACA 57.613 37.037 3.56 0.00 45.99 2.90
175 176 8.818622 ATATACATCCGTATGTGGTAGTACAT 57.181 34.615 3.56 0.00 45.99 2.29
176 177 5.864418 ACATCCGTATGTGGTAGTACATT 57.136 39.130 2.06 0.00 44.79 2.71
177 178 6.229936 ACATCCGTATGTGGTAGTACATTT 57.770 37.500 2.06 0.00 44.79 2.32
178 179 6.046593 ACATCCGTATGTGGTAGTACATTTG 58.953 40.000 2.06 0.00 44.79 2.32
179 180 5.918426 TCCGTATGTGGTAGTACATTTGA 57.082 39.130 2.06 0.00 41.31 2.69
180 181 6.283544 TCCGTATGTGGTAGTACATTTGAA 57.716 37.500 2.06 0.00 41.31 2.69
181 182 6.699366 TCCGTATGTGGTAGTACATTTGAAA 58.301 36.000 2.06 0.00 41.31 2.69
182 183 7.332557 TCCGTATGTGGTAGTACATTTGAAAT 58.667 34.615 2.06 0.00 41.31 2.17
183 184 7.493320 TCCGTATGTGGTAGTACATTTGAAATC 59.507 37.037 2.06 0.00 41.31 2.17
184 185 7.494625 CCGTATGTGGTAGTACATTTGAAATCT 59.505 37.037 2.06 0.00 41.31 2.40
185 186 8.879759 CGTATGTGGTAGTACATTTGAAATCTT 58.120 33.333 2.06 0.00 41.31 2.40
212 213 7.625828 AAGACAAATATTTAGGAACGGAAGG 57.374 36.000 0.00 0.00 0.00 3.46
213 214 6.954232 AGACAAATATTTAGGAACGGAAGGA 58.046 36.000 0.00 0.00 0.00 3.36
214 215 7.048512 AGACAAATATTTAGGAACGGAAGGAG 58.951 38.462 0.00 0.00 0.00 3.69
215 216 6.718294 ACAAATATTTAGGAACGGAAGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
216 217 7.854337 ACAAATATTTAGGAACGGAAGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
217 218 8.491958 ACAAATATTTAGGAACGGAAGGAGTAT 58.508 33.333 0.00 0.00 0.00 2.12
218 219 9.338622 CAAATATTTAGGAACGGAAGGAGTATT 57.661 33.333 0.00 0.00 0.00 1.89
219 220 9.916360 AAATATTTAGGAACGGAAGGAGTATTT 57.084 29.630 0.00 0.00 0.00 1.40
220 221 8.904099 ATATTTAGGAACGGAAGGAGTATTTG 57.096 34.615 0.00 0.00 0.00 2.32
221 222 6.363167 TTTAGGAACGGAAGGAGTATTTGA 57.637 37.500 0.00 0.00 0.00 2.69
222 223 4.473477 AGGAACGGAAGGAGTATTTGAG 57.527 45.455 0.00 0.00 0.00 3.02
223 224 4.094476 AGGAACGGAAGGAGTATTTGAGA 58.906 43.478 0.00 0.00 0.00 3.27
224 225 4.530946 AGGAACGGAAGGAGTATTTGAGAA 59.469 41.667 0.00 0.00 0.00 2.87
225 226 5.012768 AGGAACGGAAGGAGTATTTGAGAAA 59.987 40.000 0.00 0.00 0.00 2.52
226 227 5.121925 GGAACGGAAGGAGTATTTGAGAAAC 59.878 44.000 0.00 0.00 0.00 2.78
227 228 5.223449 ACGGAAGGAGTATTTGAGAAACA 57.777 39.130 0.00 0.00 0.00 2.83
228 229 5.805728 ACGGAAGGAGTATTTGAGAAACAT 58.194 37.500 0.00 0.00 0.00 2.71
229 230 6.942976 ACGGAAGGAGTATTTGAGAAACATA 58.057 36.000 0.00 0.00 0.00 2.29
230 231 7.565680 ACGGAAGGAGTATTTGAGAAACATAT 58.434 34.615 0.00 0.00 0.00 1.78
231 232 8.701895 ACGGAAGGAGTATTTGAGAAACATATA 58.298 33.333 0.00 0.00 0.00 0.86
232 233 9.712305 CGGAAGGAGTATTTGAGAAACATATAT 57.288 33.333 0.00 0.00 0.00 0.86
237 238 9.599322 GGAGTATTTGAGAAACATATATTTGCG 57.401 33.333 0.00 0.00 0.00 4.85
311 312 1.202348 GAATGGGCCGGCTTATTATGC 59.798 52.381 28.56 6.44 0.00 3.14
334 335 5.463286 CGGGTAACAGAAATTTGTTTACCC 58.537 41.667 27.13 27.13 42.99 3.69
336 337 6.461231 CGGGTAACAGAAATTTGTTTACCCAA 60.461 38.462 30.81 7.53 44.46 4.12
337 338 6.702723 GGGTAACAGAAATTTGTTTACCCAAC 59.297 38.462 29.24 16.49 44.13 3.77
338 339 6.418523 GGTAACAGAAATTTGTTTACCCAACG 59.581 38.462 18.43 0.00 41.31 4.10
339 340 5.585820 ACAGAAATTTGTTTACCCAACGT 57.414 34.783 0.00 0.00 38.36 3.99
367 368 2.539338 CGGGTGTGTGGTTGGAACG 61.539 63.158 0.00 0.00 0.00 3.95
380 381 1.314730 TGGAACGGAACAAAAGGAGC 58.685 50.000 0.00 0.00 0.00 4.70
420 426 0.525029 GAGAACGAATCGGACGGGAC 60.525 60.000 7.80 0.00 34.93 4.46
434 472 0.669625 CGGGACCAAGGAACGAGTTC 60.670 60.000 7.40 7.40 38.80 3.01
451 489 2.410466 TCCCAAACGGAAACAGCAC 58.590 52.632 0.00 0.00 37.88 4.40
456 494 0.748729 AAACGGAAACAGCACCCGAA 60.749 50.000 7.06 0.00 45.58 4.30
458 496 0.748729 ACGGAAACAGCACCCGAAAA 60.749 50.000 7.06 0.00 45.58 2.29
481 521 5.659440 AAAAATGGTGCTACATAAGTGGG 57.341 39.130 0.00 0.00 0.00 4.61
485 525 1.209504 GGTGCTACATAAGTGGGCTCA 59.790 52.381 0.00 0.00 32.19 4.26
498 538 1.903404 GGCTCACCAACCACCCAAG 60.903 63.158 0.00 0.00 35.26 3.61
511 551 2.404215 CACCCAAGGCGAATATAGACG 58.596 52.381 0.00 0.00 0.00 4.18
521 561 5.830130 GCGAATATAGACGCGAAGTATAC 57.170 43.478 15.93 0.00 44.91 1.47
522 562 4.429485 GCGAATATAGACGCGAAGTATACG 59.571 45.833 15.93 11.72 44.91 3.06
523 563 5.545527 CGAATATAGACGCGAAGTATACGT 58.454 41.667 15.93 0.00 43.83 3.57
524 564 6.686711 CGAATATAGACGCGAAGTATACGTA 58.313 40.000 15.93 0.00 40.69 3.57
525 565 6.617538 CGAATATAGACGCGAAGTATACGTAC 59.382 42.308 15.93 0.00 40.69 3.67
527 567 1.258982 AGACGCGAAGTATACGTACCG 59.741 52.381 15.93 3.48 40.69 4.02
528 568 0.304705 ACGCGAAGTATACGTACCGG 59.695 55.000 15.93 0.00 38.45 5.28
529 569 0.581529 CGCGAAGTATACGTACCGGA 59.418 55.000 9.46 0.00 0.00 5.14
530 570 1.397693 CGCGAAGTATACGTACCGGAG 60.398 57.143 9.46 0.76 0.00 4.63
531 571 1.867233 GCGAAGTATACGTACCGGAGA 59.133 52.381 9.46 0.00 0.00 3.71
532 572 2.348966 GCGAAGTATACGTACCGGAGAC 60.349 54.545 9.46 4.56 31.48 3.36
533 573 2.221981 CGAAGTATACGTACCGGAGACC 59.778 54.545 9.46 0.00 31.72 3.85
559 607 1.377725 AGCCAGATCCTGCAAACCG 60.378 57.895 6.81 0.00 0.00 4.44
561 609 0.960364 GCCAGATCCTGCAAACCGAA 60.960 55.000 0.00 0.00 0.00 4.30
562 610 0.804989 CCAGATCCTGCAAACCGAAC 59.195 55.000 0.00 0.00 0.00 3.95
564 612 0.400213 AGATCCTGCAAACCGAACCA 59.600 50.000 0.00 0.00 0.00 3.67
576 624 1.513158 CGAACCACCGAGATCAGCT 59.487 57.895 0.00 0.00 0.00 4.24
578 626 0.532573 GAACCACCGAGATCAGCTGA 59.467 55.000 20.79 20.79 0.00 4.26
579 627 0.247736 AACCACCGAGATCAGCTGAC 59.752 55.000 20.97 13.11 0.00 3.51
580 628 1.142748 CCACCGAGATCAGCTGACC 59.857 63.158 20.97 10.07 0.00 4.02
583 631 1.226802 CCGAGATCAGCTGACCACG 60.227 63.158 20.97 20.29 0.00 4.94
751 809 0.104120 GTTTTGGCGTCTGGGCTTTT 59.896 50.000 0.00 0.00 42.84 2.27
757 821 1.228124 CGTCTGGGCTTTTGGGTCA 60.228 57.895 0.00 0.00 0.00 4.02
784 848 3.055094 GGGAGTAAGAATCTGCTTCACCA 60.055 47.826 0.00 0.00 36.24 4.17
803 867 2.030363 CCATCTGGTCTCTCGATGCTAC 60.030 54.545 0.00 0.00 34.63 3.58
808 872 3.473625 TGGTCTCTCGATGCTACGATTA 58.526 45.455 6.31 0.00 41.39 1.75
860 924 6.618287 TTAAATCATATGACGGCTCTTTGG 57.382 37.500 7.78 0.00 0.00 3.28
861 925 4.422073 AATCATATGACGGCTCTTTGGA 57.578 40.909 7.78 0.00 0.00 3.53
862 926 3.904800 TCATATGACGGCTCTTTGGAA 57.095 42.857 0.00 0.00 0.00 3.53
945 1016 2.149973 TTCTCTCCCCGGTACCTAAC 57.850 55.000 10.90 0.00 0.00 2.34
947 1018 1.064166 TCTCTCCCCGGTACCTAACTG 60.064 57.143 10.90 0.00 0.00 3.16
1017 1090 3.063452 CGACCATGGAAGATTTAACACGG 59.937 47.826 21.47 0.00 0.00 4.94
1053 1126 1.143305 CGGAGGCTAATCTTCATGCG 58.857 55.000 0.00 0.00 0.00 4.73
1088 1161 1.655329 GCTCCGGATCTGGACTACG 59.345 63.158 19.95 10.97 33.48 3.51
1094 1167 1.065701 CGGATCTGGACTACGACAAGG 59.934 57.143 0.00 0.00 0.00 3.61
1095 1168 2.100989 GGATCTGGACTACGACAAGGT 58.899 52.381 0.00 0.00 0.00 3.50
1096 1169 3.285484 GGATCTGGACTACGACAAGGTA 58.715 50.000 0.00 0.00 0.00 3.08
1097 1170 3.315749 GGATCTGGACTACGACAAGGTAG 59.684 52.174 0.00 0.00 44.32 3.18
1110 1183 6.393171 ACGACAAGGTAGGTAGTAATTGAAC 58.607 40.000 0.00 0.00 0.00 3.18
1128 1201 0.433492 ACGAAAACGATCGACTTGCG 59.567 50.000 24.34 24.13 45.48 4.85
1138 1211 2.127758 GACTTGCGCGTGGTTTCG 60.128 61.111 8.43 0.00 0.00 3.46
1139 1212 2.877974 GACTTGCGCGTGGTTTCGT 61.878 57.895 8.43 0.00 0.00 3.85
1140 1213 2.425124 CTTGCGCGTGGTTTCGTG 60.425 61.111 8.43 0.00 42.99 4.35
1172 1253 2.221981 CGGCCAGCTTTAAGATCGATTC 59.778 50.000 2.24 0.00 0.00 2.52
1173 1254 3.471680 GGCCAGCTTTAAGATCGATTCT 58.528 45.455 0.00 0.00 35.70 2.40
1174 1255 4.632153 GGCCAGCTTTAAGATCGATTCTA 58.368 43.478 0.00 0.00 33.05 2.10
1231 1323 4.944619 TCTTCTTCTTCTTCTCTGTGCA 57.055 40.909 0.00 0.00 0.00 4.57
1351 1443 1.068055 CCAGCATTGCAGGTGAAGAAC 60.068 52.381 11.91 0.00 39.26 3.01
1352 1444 0.877071 AGCATTGCAGGTGAAGAACG 59.123 50.000 11.91 0.00 0.00 3.95
1353 1445 0.593128 GCATTGCAGGTGAAGAACGT 59.407 50.000 3.15 0.00 0.00 3.99
1356 1448 3.325870 CATTGCAGGTGAAGAACGTCTA 58.674 45.455 0.00 0.00 0.00 2.59
1383 1475 4.282957 TCCTTGATTGTTTTAGCCATTGCA 59.717 37.500 0.00 0.00 41.13 4.08
1520 1615 2.512485 CACATGCATGTTTGTGTGGT 57.488 45.000 29.48 1.90 39.39 4.16
1577 1745 8.914011 AGTACTATTAGCTTCATATGTGTGTCA 58.086 33.333 1.90 0.00 0.00 3.58
1578 1746 9.698309 GTACTATTAGCTTCATATGTGTGTCAT 57.302 33.333 1.90 0.00 40.25 3.06
1651 1848 3.366883 CCAAGCATTTTTAGGTAGCGCAA 60.367 43.478 11.47 0.00 0.00 4.85
1793 1991 0.947244 GCCCTCCAGATACAATTGCG 59.053 55.000 5.05 0.00 0.00 4.85
1820 2018 2.090524 GCCTTTCGCTTGCATGCAC 61.091 57.895 22.58 9.28 0.00 4.57
1823 2021 0.455633 CTTTCGCTTGCATGCACTCC 60.456 55.000 22.58 10.55 0.00 3.85
1869 2067 9.740239 TTTTCTTCTTCAGATTATTATGCATGC 57.260 29.630 11.82 11.82 0.00 4.06
1873 2071 8.557592 TTCTTCAGATTATTATGCATGCCTAG 57.442 34.615 16.68 0.00 0.00 3.02
2001 2199 8.810652 TTCACTAATTGGTTATGAACTTTTGC 57.189 30.769 0.00 0.00 0.00 3.68
2035 2233 7.415206 CCAGGTGCTATGTTTTACATAAAGGAC 60.415 40.741 5.97 5.97 40.23 3.85
2147 2345 8.169977 TGGAATGCTATCTGATAAATTTGGTC 57.830 34.615 0.00 0.00 0.00 4.02
2241 2439 5.541845 ACATGTGTATATGCTGCTATTCGT 58.458 37.500 0.00 0.00 0.00 3.85
2308 2506 9.935241 CTTGTGCCATTATATATAGTTGAGACT 57.065 33.333 6.41 0.00 39.97 3.24
2364 2562 1.073284 TCCCCAGTTAAGTGGTTCAGC 59.927 52.381 24.61 0.00 35.60 4.26
3335 3615 2.383338 ACAAGGTCCAATTGAAGGGGAT 59.617 45.455 7.12 0.00 32.43 3.85
3593 3873 5.070685 GGAGGTGTACCAAGTTCTGAAAAT 58.929 41.667 3.56 0.00 38.89 1.82
3662 3942 4.425520 TGGTCAACAAATCGGTTTTTCAC 58.574 39.130 0.00 0.00 0.00 3.18
4053 4333 6.379133 AGGTGCACATTAATGATTCAGAACAT 59.621 34.615 22.16 5.91 0.00 2.71
4118 4400 7.223260 AGCCCACAAGGTTTTATTAAAGTAC 57.777 36.000 0.00 0.00 38.26 2.73
4119 4401 6.778559 AGCCCACAAGGTTTTATTAAAGTACA 59.221 34.615 0.00 0.00 38.26 2.90
4343 4626 9.860898 ACAACTTTATTGATGCTTCCTTTTATC 57.139 29.630 0.00 0.00 0.00 1.75
4401 4684 8.488651 AAGAAGGTATCCGTATTTGTTTACTG 57.511 34.615 0.00 0.00 0.00 2.74
4551 4834 1.137086 CCATCTTGGTAGTGTCCCTCG 59.863 57.143 0.00 0.00 31.35 4.63
4559 4842 3.387374 TGGTAGTGTCCCTCGTTGTTTTA 59.613 43.478 0.00 0.00 0.00 1.52
4682 4965 8.621532 GTCCAATACCAAATATATTCTGCTCA 57.378 34.615 0.00 0.00 0.00 4.26
4772 5055 6.767902 GTGACATCATTGTGACATATACCCTT 59.232 38.462 0.00 0.00 39.47 3.95
4836 5119 5.275067 AGTTTATGCCATTGTTTGTGTGT 57.725 34.783 0.00 0.00 0.00 3.72
5225 5529 9.573133 CAAATGGAGAAGTTACAATTGATTACC 57.427 33.333 13.59 8.63 28.93 2.85
5248 5552 5.235186 CCTGGTGAAATATCGACATCAACTC 59.765 44.000 7.76 0.00 30.85 3.01
5251 5555 6.535150 TGGTGAAATATCGACATCAACTCTTC 59.465 38.462 7.76 0.00 30.85 2.87
5289 5595 4.772434 CACAACAGACATAAGAAACCACG 58.228 43.478 0.00 0.00 0.00 4.94
5298 5604 4.755123 ACATAAGAAACCACGGAGTTCTTG 59.245 41.667 20.33 12.86 41.61 3.02
5303 5609 4.755123 AGAAACCACGGAGTTCTTGTAATG 59.245 41.667 0.00 0.00 41.61 1.90
5328 5634 5.706916 CCTGCCATCATATGATTAGCAAAC 58.293 41.667 27.80 11.47 39.38 2.93
5388 5694 9.159364 GGTGGTAACTAATGTTAGGTTTCTTAG 57.841 37.037 4.92 0.00 39.09 2.18
5389 5695 9.933723 GTGGTAACTAATGTTAGGTTTCTTAGA 57.066 33.333 4.92 0.00 39.09 2.10
5390 5696 9.933723 TGGTAACTAATGTTAGGTTTCTTAGAC 57.066 33.333 4.92 0.00 39.09 2.59
5455 5779 5.416326 AGTTTTTAAACGCATAGGCCACATA 59.584 36.000 5.01 0.00 43.51 2.29
5498 5822 5.503357 GCACAAAATTACTCGTGTCAACTGA 60.503 40.000 0.00 0.00 0.00 3.41
5503 5827 4.642445 TTACTCGTGTCAACTGAGAACA 57.358 40.909 0.00 0.00 33.75 3.18
5504 5828 3.735237 ACTCGTGTCAACTGAGAACAT 57.265 42.857 9.09 0.00 33.75 2.71
5505 5829 3.643763 ACTCGTGTCAACTGAGAACATC 58.356 45.455 9.09 0.00 33.75 3.06
5506 5830 3.319405 ACTCGTGTCAACTGAGAACATCT 59.681 43.478 9.09 0.00 33.75 2.90
5556 5884 2.123251 AGATCCCCGTCGCCATCT 60.123 61.111 0.00 0.00 0.00 2.90
5557 5885 1.749334 GAGATCCCCGTCGCCATCTT 61.749 60.000 0.00 0.00 0.00 2.40
5658 5991 5.728253 AGCCATCACCATCACCTATATACAT 59.272 40.000 0.00 0.00 0.00 2.29
5659 5992 6.051717 GCCATCACCATCACCTATATACATC 58.948 44.000 0.00 0.00 0.00 3.06
5660 5993 6.352137 GCCATCACCATCACCTATATACATCA 60.352 42.308 0.00 0.00 0.00 3.07
5661 5994 7.636635 GCCATCACCATCACCTATATACATCAT 60.637 40.741 0.00 0.00 0.00 2.45
5662 5995 7.930325 CCATCACCATCACCTATATACATCATC 59.070 40.741 0.00 0.00 0.00 2.92
5663 5996 8.480501 CATCACCATCACCTATATACATCATCA 58.519 37.037 0.00 0.00 0.00 3.07
5664 5997 7.840931 TCACCATCACCTATATACATCATCAC 58.159 38.462 0.00 0.00 0.00 3.06
5665 5998 7.044181 CACCATCACCTATATACATCATCACC 58.956 42.308 0.00 0.00 0.00 4.02
5666 5999 6.962311 ACCATCACCTATATACATCATCACCT 59.038 38.462 0.00 0.00 0.00 4.00
5667 6000 7.093156 ACCATCACCTATATACATCATCACCTG 60.093 40.741 0.00 0.00 0.00 4.00
5668 6001 7.093156 CCATCACCTATATACATCATCACCTGT 60.093 40.741 0.00 0.00 0.00 4.00
5669 6002 8.971073 CATCACCTATATACATCATCACCTGTA 58.029 37.037 0.00 0.00 32.75 2.74
5670 6003 9.720874 ATCACCTATATACATCATCACCTGTAT 57.279 33.333 0.00 0.00 40.64 2.29
5684 6017 9.533831 TCATCACCTGTATATATACACATGTCT 57.466 33.333 19.51 10.61 38.28 3.41
5685 6018 9.794685 CATCACCTGTATATATACACATGTCTC 57.205 37.037 19.51 0.00 38.28 3.36
5686 6019 8.934023 TCACCTGTATATATACACATGTCTCA 57.066 34.615 19.51 4.71 38.28 3.27
5687 6020 9.362151 TCACCTGTATATATACACATGTCTCAA 57.638 33.333 19.51 4.42 38.28 3.02
5688 6021 9.981114 CACCTGTATATATACACATGTCTCAAA 57.019 33.333 19.51 0.00 38.28 2.69
5714 6047 6.545504 AAAAATATACACCTCGCAGCTATG 57.454 37.500 0.00 0.00 0.00 2.23
5715 6048 3.876274 ATATACACCTCGCAGCTATGG 57.124 47.619 0.00 0.00 0.00 2.74
5716 6049 1.704641 ATACACCTCGCAGCTATGGA 58.295 50.000 0.00 0.00 0.00 3.41
5717 6050 1.032794 TACACCTCGCAGCTATGGAG 58.967 55.000 0.00 0.00 0.00 3.86
5726 6059 4.946411 GCTATGGAGCGAGGTACG 57.054 61.111 0.00 0.00 39.39 3.67
5727 6060 2.031360 GCTATGGAGCGAGGTACGT 58.969 57.895 0.00 0.00 44.60 3.57
5728 6061 0.317938 GCTATGGAGCGAGGTACGTG 60.318 60.000 0.00 0.00 44.60 4.49
5729 6062 1.306148 CTATGGAGCGAGGTACGTGA 58.694 55.000 0.00 0.00 44.60 4.35
5730 6063 1.880675 CTATGGAGCGAGGTACGTGAT 59.119 52.381 0.00 0.00 44.60 3.06
5731 6064 0.385751 ATGGAGCGAGGTACGTGATG 59.614 55.000 0.00 0.00 44.60 3.07
5732 6065 0.678684 TGGAGCGAGGTACGTGATGA 60.679 55.000 0.00 0.00 44.60 2.92
5733 6066 0.669077 GGAGCGAGGTACGTGATGAT 59.331 55.000 0.00 0.00 44.60 2.45
5734 6067 1.600663 GGAGCGAGGTACGTGATGATG 60.601 57.143 0.00 0.00 44.60 3.07
5735 6068 0.249073 AGCGAGGTACGTGATGATGC 60.249 55.000 0.00 0.00 44.60 3.91
5736 6069 1.215655 GCGAGGTACGTGATGATGCC 61.216 60.000 0.00 0.00 44.60 4.40
5737 6070 0.102300 CGAGGTACGTGATGATGCCA 59.898 55.000 0.00 0.00 37.22 4.92
5738 6071 1.269778 CGAGGTACGTGATGATGCCAT 60.270 52.381 0.00 0.00 37.22 4.40
5739 6072 2.030274 CGAGGTACGTGATGATGCCATA 60.030 50.000 0.00 0.00 37.22 2.74
5740 6073 3.579709 GAGGTACGTGATGATGCCATAG 58.420 50.000 0.00 0.00 32.09 2.23
5741 6074 3.230976 AGGTACGTGATGATGCCATAGA 58.769 45.455 0.00 0.00 32.09 1.98
5742 6075 3.005897 AGGTACGTGATGATGCCATAGAC 59.994 47.826 0.00 0.00 32.09 2.59
5743 6076 2.533266 ACGTGATGATGCCATAGACC 57.467 50.000 0.00 0.00 32.09 3.85
5744 6077 2.042464 ACGTGATGATGCCATAGACCT 58.958 47.619 0.00 0.00 32.09 3.85
5745 6078 3.230976 ACGTGATGATGCCATAGACCTA 58.769 45.455 0.00 0.00 32.09 3.08
5746 6079 3.256879 ACGTGATGATGCCATAGACCTAG 59.743 47.826 0.00 0.00 32.09 3.02
5747 6080 3.507622 CGTGATGATGCCATAGACCTAGA 59.492 47.826 0.00 0.00 32.09 2.43
5748 6081 4.380339 CGTGATGATGCCATAGACCTAGAG 60.380 50.000 0.00 0.00 32.09 2.43
5749 6082 4.526262 GTGATGATGCCATAGACCTAGAGT 59.474 45.833 0.00 0.00 32.09 3.24
5750 6083 5.712446 GTGATGATGCCATAGACCTAGAGTA 59.288 44.000 0.00 0.00 32.09 2.59
5751 6084 5.948758 TGATGATGCCATAGACCTAGAGTAG 59.051 44.000 0.00 0.00 32.09 2.57
5752 6085 5.359576 GATGATGCCATAGACCTAGAGTAGG 59.640 48.000 0.00 0.00 41.58 3.18
5753 6086 7.585806 GATGATGCCATAGACCTAGAGTAGGG 61.586 50.000 5.01 0.00 40.77 3.53
5754 6087 9.878106 GATGATGCCATAGACCTAGAGTAGGGT 62.878 48.148 5.01 0.00 40.77 4.34
5780 6113 4.909001 AGACCTGATCTATACGTCCTACC 58.091 47.826 0.00 0.00 35.15 3.18
5781 6114 4.009002 GACCTGATCTATACGTCCTACCC 58.991 52.174 0.00 0.00 0.00 3.69
5782 6115 3.396946 ACCTGATCTATACGTCCTACCCA 59.603 47.826 0.00 0.00 0.00 4.51
5783 6116 4.141088 ACCTGATCTATACGTCCTACCCAA 60.141 45.833 0.00 0.00 0.00 4.12
5784 6117 4.459685 CCTGATCTATACGTCCTACCCAAG 59.540 50.000 0.00 0.00 0.00 3.61
5786 6119 3.959495 TCTATACGTCCTACCCAAGGT 57.041 47.619 0.00 0.00 46.62 3.50
5787 6120 3.825328 TCTATACGTCCTACCCAAGGTC 58.175 50.000 0.00 0.00 46.62 3.85
5788 6121 2.537633 ATACGTCCTACCCAAGGTCA 57.462 50.000 0.00 0.00 46.62 4.02
5789 6122 1.549203 TACGTCCTACCCAAGGTCAC 58.451 55.000 0.00 0.00 46.62 3.67
5790 6123 0.178941 ACGTCCTACCCAAGGTCACT 60.179 55.000 0.00 0.00 46.62 3.41
5791 6124 1.076024 ACGTCCTACCCAAGGTCACTA 59.924 52.381 0.00 0.00 46.62 2.74
5792 6125 2.292061 ACGTCCTACCCAAGGTCACTAT 60.292 50.000 0.00 0.00 46.62 2.12
5793 6126 2.764572 CGTCCTACCCAAGGTCACTATT 59.235 50.000 0.00 0.00 46.62 1.73
5794 6127 3.181478 CGTCCTACCCAAGGTCACTATTC 60.181 52.174 0.00 0.00 46.62 1.75
5795 6128 4.031611 GTCCTACCCAAGGTCACTATTCT 58.968 47.826 0.00 0.00 46.62 2.40
5796 6129 5.206587 GTCCTACCCAAGGTCACTATTCTA 58.793 45.833 0.00 0.00 46.62 2.10
5797 6130 5.302313 GTCCTACCCAAGGTCACTATTCTAG 59.698 48.000 0.00 0.00 46.62 2.43
5798 6131 5.195146 TCCTACCCAAGGTCACTATTCTAGA 59.805 44.000 0.00 0.00 46.62 2.43
5799 6132 5.897824 CCTACCCAAGGTCACTATTCTAGAA 59.102 44.000 7.82 7.82 40.94 2.10
5800 6133 5.941555 ACCCAAGGTCACTATTCTAGAAG 57.058 43.478 11.53 0.30 0.00 2.85
5801 6134 5.342866 ACCCAAGGTCACTATTCTAGAAGT 58.657 41.667 11.53 1.00 0.00 3.01
5802 6135 6.500336 ACCCAAGGTCACTATTCTAGAAGTA 58.500 40.000 11.53 3.41 0.00 2.24
5803 6136 6.958192 ACCCAAGGTCACTATTCTAGAAGTAA 59.042 38.462 11.53 0.00 0.00 2.24
5804 6137 7.124448 ACCCAAGGTCACTATTCTAGAAGTAAG 59.876 40.741 11.53 10.36 0.00 2.34
5805 6138 7.418025 CCCAAGGTCACTATTCTAGAAGTAAGG 60.418 44.444 11.53 0.03 0.00 2.69
5806 6139 7.342284 CCAAGGTCACTATTCTAGAAGTAAGGA 59.658 40.741 11.53 2.38 0.00 3.36
5807 6140 7.885009 AGGTCACTATTCTAGAAGTAAGGAC 57.115 40.000 11.53 13.11 0.00 3.85
5808 6141 7.411808 AGGTCACTATTCTAGAAGTAAGGACA 58.588 38.462 11.53 0.00 0.00 4.02
5809 6142 8.062536 AGGTCACTATTCTAGAAGTAAGGACAT 58.937 37.037 11.53 9.27 0.00 3.06
5810 6143 8.697292 GGTCACTATTCTAGAAGTAAGGACATT 58.303 37.037 11.53 0.00 0.00 2.71
5811 6144 9.738832 GTCACTATTCTAGAAGTAAGGACATTC 57.261 37.037 11.53 0.00 0.00 2.67
5812 6145 9.475620 TCACTATTCTAGAAGTAAGGACATTCA 57.524 33.333 11.53 0.00 0.00 2.57
5821 6154 8.950208 AGAAGTAAGGACATTCAAAGTATAGC 57.050 34.615 0.00 0.00 0.00 2.97
5822 6155 8.540388 AGAAGTAAGGACATTCAAAGTATAGCA 58.460 33.333 0.00 0.00 0.00 3.49
5823 6156 9.162764 GAAGTAAGGACATTCAAAGTATAGCAA 57.837 33.333 0.00 0.00 0.00 3.91
5824 6157 8.723942 AGTAAGGACATTCAAAGTATAGCAAG 57.276 34.615 0.00 0.00 0.00 4.01
5825 6158 7.770897 AGTAAGGACATTCAAAGTATAGCAAGG 59.229 37.037 0.00 0.00 0.00 3.61
5826 6159 6.313519 AGGACATTCAAAGTATAGCAAGGA 57.686 37.500 0.00 0.00 0.00 3.36
5827 6160 6.721318 AGGACATTCAAAGTATAGCAAGGAA 58.279 36.000 0.00 0.00 0.00 3.36
5828 6161 7.349598 AGGACATTCAAAGTATAGCAAGGAAT 58.650 34.615 0.00 0.00 0.00 3.01
5829 6162 8.494433 AGGACATTCAAAGTATAGCAAGGAATA 58.506 33.333 0.00 0.00 0.00 1.75
5830 6163 9.289782 GGACATTCAAAGTATAGCAAGGAATAT 57.710 33.333 0.00 0.00 0.00 1.28
5832 6165 8.993121 ACATTCAAAGTATAGCAAGGAATATCG 58.007 33.333 0.00 0.00 0.00 2.92
5833 6166 9.208022 CATTCAAAGTATAGCAAGGAATATCGA 57.792 33.333 0.00 0.00 0.00 3.59
5834 6167 9.950496 ATTCAAAGTATAGCAAGGAATATCGAT 57.050 29.630 2.16 2.16 0.00 3.59
5835 6168 9.778741 TTCAAAGTATAGCAAGGAATATCGATT 57.221 29.630 1.71 0.00 0.00 3.34
5836 6169 9.208022 TCAAAGTATAGCAAGGAATATCGATTG 57.792 33.333 1.71 0.00 0.00 2.67
5837 6170 9.208022 CAAAGTATAGCAAGGAATATCGATTGA 57.792 33.333 1.71 0.00 0.00 2.57
5838 6171 9.778741 AAAGTATAGCAAGGAATATCGATTGAA 57.221 29.630 1.71 0.00 0.00 2.69
5839 6172 8.994429 AGTATAGCAAGGAATATCGATTGAAG 57.006 34.615 1.71 0.00 0.00 3.02
5840 6173 6.734104 ATAGCAAGGAATATCGATTGAAGC 57.266 37.500 1.71 0.00 0.00 3.86
5841 6174 3.817647 AGCAAGGAATATCGATTGAAGCC 59.182 43.478 1.71 0.00 0.00 4.35
5842 6175 3.565482 GCAAGGAATATCGATTGAAGCCA 59.435 43.478 1.71 0.00 0.00 4.75
5843 6176 4.217118 GCAAGGAATATCGATTGAAGCCAT 59.783 41.667 1.71 0.00 0.00 4.40
5844 6177 5.618640 GCAAGGAATATCGATTGAAGCCATC 60.619 44.000 1.71 0.00 0.00 3.51
5845 6178 5.233083 AGGAATATCGATTGAAGCCATCA 57.767 39.130 1.71 0.00 35.85 3.07
5846 6179 5.243981 AGGAATATCGATTGAAGCCATCAG 58.756 41.667 1.71 0.00 39.77 2.90
5847 6180 4.394300 GGAATATCGATTGAAGCCATCAGG 59.606 45.833 1.71 0.00 39.77 3.86
5848 6181 4.630644 ATATCGATTGAAGCCATCAGGT 57.369 40.909 1.71 0.00 39.77 4.00
5849 6182 2.028420 TCGATTGAAGCCATCAGGTG 57.972 50.000 0.00 0.00 39.77 4.00
5850 6183 0.379669 CGATTGAAGCCATCAGGTGC 59.620 55.000 0.00 0.00 39.77 5.01
5851 6184 1.466856 GATTGAAGCCATCAGGTGCA 58.533 50.000 0.00 0.00 39.77 4.57
5852 6185 1.820519 GATTGAAGCCATCAGGTGCAA 59.179 47.619 0.00 0.00 39.77 4.08
5853 6186 1.927487 TTGAAGCCATCAGGTGCAAT 58.073 45.000 0.00 0.00 39.77 3.56
5854 6187 1.466856 TGAAGCCATCAGGTGCAATC 58.533 50.000 0.00 0.00 37.19 2.67
5855 6188 0.743097 GAAGCCATCAGGTGCAATCC 59.257 55.000 0.00 0.00 37.19 3.01
5856 6189 1.033746 AAGCCATCAGGTGCAATCCG 61.034 55.000 0.00 0.00 37.19 4.18
5857 6190 3.113745 CCATCAGGTGCAATCCGC 58.886 61.111 0.00 0.00 42.89 5.54
5858 6191 1.452651 CCATCAGGTGCAATCCGCT 60.453 57.895 0.00 0.00 43.06 5.52
5859 6192 1.442526 CCATCAGGTGCAATCCGCTC 61.443 60.000 0.00 0.00 43.06 5.03
5860 6193 1.522355 ATCAGGTGCAATCCGCTCG 60.522 57.895 0.00 0.00 43.06 5.03
5861 6194 1.960040 ATCAGGTGCAATCCGCTCGA 61.960 55.000 0.00 0.00 43.06 4.04
5862 6195 2.125512 AGGTGCAATCCGCTCGAC 60.126 61.111 0.00 0.00 43.06 4.20
5863 6196 3.195698 GGTGCAATCCGCTCGACC 61.196 66.667 0.00 0.00 43.06 4.79
5864 6197 2.434185 GTGCAATCCGCTCGACCA 60.434 61.111 0.00 0.00 43.06 4.02
5865 6198 2.125552 TGCAATCCGCTCGACCAG 60.126 61.111 0.00 0.00 43.06 4.00
5866 6199 2.125512 GCAATCCGCTCGACCAGT 60.126 61.111 0.00 0.00 37.77 4.00
5867 6200 2.167861 GCAATCCGCTCGACCAGTC 61.168 63.158 0.00 0.00 37.77 3.51
5877 6210 2.931536 CGACCAGTCGTCTCATTCG 58.068 57.895 11.94 0.00 46.99 3.34
5878 6211 0.523546 CGACCAGTCGTCTCATTCGG 60.524 60.000 11.94 0.00 46.99 4.30
5879 6212 0.809385 GACCAGTCGTCTCATTCGGA 59.191 55.000 0.00 0.00 38.57 4.55
5880 6213 1.405821 GACCAGTCGTCTCATTCGGAT 59.594 52.381 0.00 0.00 38.57 4.18
5881 6214 2.617308 GACCAGTCGTCTCATTCGGATA 59.383 50.000 0.00 0.00 38.57 2.59
5882 6215 2.358267 ACCAGTCGTCTCATTCGGATAC 59.642 50.000 0.00 0.00 0.00 2.24
5883 6216 2.287668 CCAGTCGTCTCATTCGGATACC 60.288 54.545 0.00 0.00 0.00 2.73
5884 6217 2.619177 CAGTCGTCTCATTCGGATACCT 59.381 50.000 0.00 0.00 0.00 3.08
5885 6218 2.879646 AGTCGTCTCATTCGGATACCTC 59.120 50.000 0.00 0.00 0.00 3.85
5886 6219 2.030981 GTCGTCTCATTCGGATACCTCC 60.031 54.545 0.00 0.00 38.29 4.30
5887 6220 1.954382 CGTCTCATTCGGATACCTCCA 59.046 52.381 0.00 0.00 42.19 3.86
5888 6221 2.361119 CGTCTCATTCGGATACCTCCAA 59.639 50.000 0.00 0.00 42.19 3.53
5889 6222 3.005897 CGTCTCATTCGGATACCTCCAAT 59.994 47.826 0.00 0.00 42.19 3.16
5890 6223 4.501571 CGTCTCATTCGGATACCTCCAATT 60.502 45.833 0.00 0.00 42.19 2.32
5891 6224 5.368989 GTCTCATTCGGATACCTCCAATTT 58.631 41.667 0.00 0.00 42.19 1.82
5892 6225 5.823045 GTCTCATTCGGATACCTCCAATTTT 59.177 40.000 0.00 0.00 42.19 1.82
5893 6226 6.990349 GTCTCATTCGGATACCTCCAATTTTA 59.010 38.462 0.00 0.00 42.19 1.52
5894 6227 6.990349 TCTCATTCGGATACCTCCAATTTTAC 59.010 38.462 0.00 0.00 42.19 2.01
5895 6228 6.895782 TCATTCGGATACCTCCAATTTTACT 58.104 36.000 0.00 0.00 42.19 2.24
5896 6229 6.990349 TCATTCGGATACCTCCAATTTTACTC 59.010 38.462 0.00 0.00 42.19 2.59
5897 6230 4.940463 TCGGATACCTCCAATTTTACTCG 58.060 43.478 0.00 0.00 42.19 4.18
5898 6231 4.646040 TCGGATACCTCCAATTTTACTCGA 59.354 41.667 0.00 0.00 42.19 4.04
5899 6232 4.743644 CGGATACCTCCAATTTTACTCGAC 59.256 45.833 0.00 0.00 42.19 4.20
5900 6233 5.055144 GGATACCTCCAATTTTACTCGACC 58.945 45.833 0.00 0.00 41.64 4.79
5901 6234 5.163332 GGATACCTCCAATTTTACTCGACCT 60.163 44.000 0.00 0.00 41.64 3.85
5902 6235 3.939066 ACCTCCAATTTTACTCGACCTG 58.061 45.455 0.00 0.00 0.00 4.00
5903 6236 3.270877 CCTCCAATTTTACTCGACCTGG 58.729 50.000 0.00 0.00 0.00 4.45
5904 6237 3.055385 CCTCCAATTTTACTCGACCTGGA 60.055 47.826 0.00 0.00 0.00 3.86
5905 6238 4.384208 CCTCCAATTTTACTCGACCTGGAT 60.384 45.833 0.00 0.00 31.36 3.41
5906 6239 4.513442 TCCAATTTTACTCGACCTGGATG 58.487 43.478 0.00 0.00 0.00 3.51
5907 6240 4.224147 TCCAATTTTACTCGACCTGGATGA 59.776 41.667 0.00 0.00 0.00 2.92
5908 6241 4.941263 CCAATTTTACTCGACCTGGATGAA 59.059 41.667 0.00 0.00 0.00 2.57
5909 6242 5.065218 CCAATTTTACTCGACCTGGATGAAG 59.935 44.000 0.00 0.00 0.00 3.02
5910 6243 4.884668 TTTTACTCGACCTGGATGAAGT 57.115 40.909 0.00 0.96 0.00 3.01
5911 6244 4.451629 TTTACTCGACCTGGATGAAGTC 57.548 45.455 0.00 0.00 0.00 3.01
5912 6245 1.924731 ACTCGACCTGGATGAAGTCA 58.075 50.000 0.00 0.00 0.00 3.41
5913 6246 2.461695 ACTCGACCTGGATGAAGTCAT 58.538 47.619 0.00 0.00 39.70 3.06
5914 6247 2.834549 ACTCGACCTGGATGAAGTCATT 59.165 45.455 0.00 0.00 36.57 2.57
5915 6248 3.118956 ACTCGACCTGGATGAAGTCATTC 60.119 47.826 0.00 0.00 36.57 2.67
5916 6249 2.159240 TCGACCTGGATGAAGTCATTCG 60.159 50.000 0.00 6.14 38.34 3.34
5917 6250 2.159240 CGACCTGGATGAAGTCATTCGA 60.159 50.000 0.00 0.00 38.34 3.71
5918 6251 3.491619 CGACCTGGATGAAGTCATTCGAT 60.492 47.826 0.00 0.00 38.34 3.59
5919 6252 4.054671 GACCTGGATGAAGTCATTCGATC 58.945 47.826 0.00 0.00 38.34 3.69
5920 6253 3.452264 ACCTGGATGAAGTCATTCGATCA 59.548 43.478 0.00 0.00 38.34 2.92
5921 6254 4.102210 ACCTGGATGAAGTCATTCGATCAT 59.898 41.667 0.00 0.00 38.34 2.45
5922 6255 5.305386 ACCTGGATGAAGTCATTCGATCATA 59.695 40.000 0.00 0.00 38.34 2.15
5923 6256 5.636965 CCTGGATGAAGTCATTCGATCATAC 59.363 44.000 0.52 0.52 38.34 2.39
5924 6257 6.160576 TGGATGAAGTCATTCGATCATACA 57.839 37.500 5.44 5.44 40.04 2.29
5925 6258 6.218746 TGGATGAAGTCATTCGATCATACAG 58.781 40.000 5.44 0.00 38.02 2.74
5926 6259 5.636965 GGATGAAGTCATTCGATCATACAGG 59.363 44.000 2.43 0.00 38.34 4.00
5927 6260 5.852282 TGAAGTCATTCGATCATACAGGA 57.148 39.130 0.00 0.00 38.34 3.86
5928 6261 6.220726 TGAAGTCATTCGATCATACAGGAA 57.779 37.500 0.00 0.00 38.34 3.36
5929 6262 6.639563 TGAAGTCATTCGATCATACAGGAAA 58.360 36.000 0.00 0.00 38.34 3.13
5930 6263 6.535150 TGAAGTCATTCGATCATACAGGAAAC 59.465 38.462 0.00 0.00 38.34 2.78
5931 6264 5.360591 AGTCATTCGATCATACAGGAAACC 58.639 41.667 0.00 0.00 0.00 3.27
5932 6265 5.104941 AGTCATTCGATCATACAGGAAACCA 60.105 40.000 0.00 0.00 0.00 3.67
5933 6266 5.006746 GTCATTCGATCATACAGGAAACCAC 59.993 44.000 0.00 0.00 0.00 4.16
5934 6267 4.819105 TTCGATCATACAGGAAACCACT 57.181 40.909 0.00 0.00 0.00 4.00
5935 6268 4.386867 TCGATCATACAGGAAACCACTC 57.613 45.455 0.00 0.00 0.00 3.51
5936 6269 3.767131 TCGATCATACAGGAAACCACTCA 59.233 43.478 0.00 0.00 0.00 3.41
5937 6270 4.115516 CGATCATACAGGAAACCACTCAG 58.884 47.826 0.00 0.00 0.00 3.35
5938 6271 4.142160 CGATCATACAGGAAACCACTCAGA 60.142 45.833 0.00 0.00 0.00 3.27
5939 6272 4.808414 TCATACAGGAAACCACTCAGAG 57.192 45.455 0.00 0.00 0.00 3.35
5940 6273 4.160329 TCATACAGGAAACCACTCAGAGT 58.840 43.478 0.00 0.00 0.00 3.24
5941 6274 5.330233 TCATACAGGAAACCACTCAGAGTA 58.670 41.667 1.67 0.00 0.00 2.59
5942 6275 5.185249 TCATACAGGAAACCACTCAGAGTAC 59.815 44.000 1.67 0.00 0.00 2.73
5943 6276 3.305720 ACAGGAAACCACTCAGAGTACA 58.694 45.455 1.67 0.00 0.00 2.90
5944 6277 3.322254 ACAGGAAACCACTCAGAGTACAG 59.678 47.826 1.67 0.00 0.00 2.74
5945 6278 3.574396 CAGGAAACCACTCAGAGTACAGA 59.426 47.826 1.67 0.00 0.00 3.41
5946 6279 4.039245 CAGGAAACCACTCAGAGTACAGAA 59.961 45.833 1.67 0.00 0.00 3.02
5947 6280 4.282195 AGGAAACCACTCAGAGTACAGAAG 59.718 45.833 1.67 0.00 0.00 2.85
5948 6281 4.281182 GGAAACCACTCAGAGTACAGAAGA 59.719 45.833 1.67 0.00 0.00 2.87
5949 6282 4.857509 AACCACTCAGAGTACAGAAGAC 57.142 45.455 1.67 0.00 0.00 3.01
5950 6283 3.158676 ACCACTCAGAGTACAGAAGACC 58.841 50.000 1.67 0.00 0.00 3.85
5951 6284 3.181427 ACCACTCAGAGTACAGAAGACCT 60.181 47.826 1.67 0.00 0.00 3.85
5952 6285 4.043059 ACCACTCAGAGTACAGAAGACCTA 59.957 45.833 1.67 0.00 0.00 3.08
5953 6286 4.638421 CCACTCAGAGTACAGAAGACCTAG 59.362 50.000 1.67 0.00 0.00 3.02
5954 6287 5.492895 CACTCAGAGTACAGAAGACCTAGA 58.507 45.833 1.67 0.00 0.00 2.43
5955 6288 5.584649 CACTCAGAGTACAGAAGACCTAGAG 59.415 48.000 1.67 0.00 0.00 2.43
5956 6289 5.249852 ACTCAGAGTACAGAAGACCTAGAGT 59.750 44.000 0.00 0.00 0.00 3.24
5957 6290 5.736813 TCAGAGTACAGAAGACCTAGAGTC 58.263 45.833 0.00 0.00 46.71 3.36
5965 6298 3.877951 GACCTAGAGTCACTCGGGA 57.122 57.895 21.54 2.54 45.55 5.14
5966 6299 2.351706 GACCTAGAGTCACTCGGGAT 57.648 55.000 21.54 9.58 45.55 3.85
5967 6300 1.950909 GACCTAGAGTCACTCGGGATG 59.049 57.143 21.54 4.57 45.55 3.51
5968 6301 1.323412 CCTAGAGTCACTCGGGATGG 58.677 60.000 12.73 2.91 35.36 3.51
5969 6302 0.671251 CTAGAGTCACTCGGGATGGC 59.329 60.000 0.00 0.00 35.36 4.40
5970 6303 0.033503 TAGAGTCACTCGGGATGGCA 60.034 55.000 0.00 0.00 35.36 4.92
5971 6304 0.904865 AGAGTCACTCGGGATGGCAA 60.905 55.000 0.00 0.00 35.36 4.52
5972 6305 0.741221 GAGTCACTCGGGATGGCAAC 60.741 60.000 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.836864 TCACTCATTTTGCTTCATATGTAGTAT 57.163 29.630 10.61 0.00 0.00 2.12
8 9 9.665719 TTCACTCATTTTGCTTCATATGTAGTA 57.334 29.630 10.61 3.81 0.00 1.82
9 10 8.565896 TTCACTCATTTTGCTTCATATGTAGT 57.434 30.769 10.61 0.00 0.00 2.73
11 12 9.399797 AGATTCACTCATTTTGCTTCATATGTA 57.600 29.630 1.90 0.00 0.00 2.29
12 13 8.289939 AGATTCACTCATTTTGCTTCATATGT 57.710 30.769 1.90 0.00 0.00 2.29
13 14 9.661187 GTAGATTCACTCATTTTGCTTCATATG 57.339 33.333 0.00 0.00 0.00 1.78
14 15 9.399797 TGTAGATTCACTCATTTTGCTTCATAT 57.600 29.630 0.00 0.00 0.00 1.78
15 16 8.791327 TGTAGATTCACTCATTTTGCTTCATA 57.209 30.769 0.00 0.00 0.00 2.15
16 17 7.692460 TGTAGATTCACTCATTTTGCTTCAT 57.308 32.000 0.00 0.00 0.00 2.57
17 18 7.391275 TGATGTAGATTCACTCATTTTGCTTCA 59.609 33.333 0.00 0.00 0.00 3.02
18 19 7.755591 TGATGTAGATTCACTCATTTTGCTTC 58.244 34.615 0.00 0.00 0.00 3.86
19 20 7.692460 TGATGTAGATTCACTCATTTTGCTT 57.308 32.000 0.00 0.00 0.00 3.91
20 21 7.692460 TTGATGTAGATTCACTCATTTTGCT 57.308 32.000 0.00 0.00 0.00 3.91
21 22 8.746922 TTTTGATGTAGATTCACTCATTTTGC 57.253 30.769 0.00 0.00 0.00 3.68
65 66 9.787435 TGTCTACTTTTTCATAAGGTTGTACAT 57.213 29.630 0.00 0.00 0.00 2.29
66 67 9.787435 ATGTCTACTTTTTCATAAGGTTGTACA 57.213 29.630 0.00 0.00 0.00 2.90
69 70 8.918202 TGATGTCTACTTTTTCATAAGGTTGT 57.082 30.769 0.00 0.00 0.00 3.32
101 102 9.836864 TCACTCATTTTGCTTCATATGTAGTAT 57.163 29.630 10.61 0.00 0.00 2.12
102 103 9.665719 TTCACTCATTTTGCTTCATATGTAGTA 57.334 29.630 10.61 3.81 0.00 1.82
103 104 8.454106 GTTCACTCATTTTGCTTCATATGTAGT 58.546 33.333 10.61 0.00 0.00 2.73
104 105 7.912250 GGTTCACTCATTTTGCTTCATATGTAG 59.088 37.037 5.04 5.04 0.00 2.74
105 106 7.611467 AGGTTCACTCATTTTGCTTCATATGTA 59.389 33.333 1.90 0.00 0.00 2.29
106 107 6.435277 AGGTTCACTCATTTTGCTTCATATGT 59.565 34.615 1.90 0.00 0.00 2.29
107 108 6.860080 AGGTTCACTCATTTTGCTTCATATG 58.140 36.000 0.00 0.00 0.00 1.78
108 109 7.611467 TGTAGGTTCACTCATTTTGCTTCATAT 59.389 33.333 0.00 0.00 0.00 1.78
109 110 6.939730 TGTAGGTTCACTCATTTTGCTTCATA 59.060 34.615 0.00 0.00 0.00 2.15
110 111 5.769662 TGTAGGTTCACTCATTTTGCTTCAT 59.230 36.000 0.00 0.00 0.00 2.57
111 112 5.008613 GTGTAGGTTCACTCATTTTGCTTCA 59.991 40.000 0.00 0.00 35.68 3.02
112 113 5.239525 AGTGTAGGTTCACTCATTTTGCTTC 59.760 40.000 0.00 0.00 44.07 3.86
113 114 5.133221 AGTGTAGGTTCACTCATTTTGCTT 58.867 37.500 0.00 0.00 44.07 3.91
114 115 4.718961 AGTGTAGGTTCACTCATTTTGCT 58.281 39.130 0.00 0.00 44.07 3.91
124 125 6.026947 ACATACTTCAGAGTGTAGGTTCAC 57.973 41.667 0.00 0.00 36.60 3.18
125 126 6.010850 AGACATACTTCAGAGTGTAGGTTCA 58.989 40.000 5.01 0.00 34.47 3.18
126 127 6.518208 AGACATACTTCAGAGTGTAGGTTC 57.482 41.667 5.01 1.14 34.47 3.62
127 128 9.869667 ATATAGACATACTTCAGAGTGTAGGTT 57.130 33.333 5.01 0.74 34.47 3.50
134 135 9.168451 CGGATGTATATAGACATACTTCAGAGT 57.832 37.037 18.29 0.00 40.18 3.24
135 136 9.168451 ACGGATGTATATAGACATACTTCAGAG 57.832 37.037 18.29 6.37 40.18 3.35
141 142 9.121658 CCACATACGGATGTATATAGACATACT 57.878 37.037 14.23 9.55 44.82 2.12
142 143 8.900781 ACCACATACGGATGTATATAGACATAC 58.099 37.037 14.23 12.39 44.82 2.39
144 145 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
145 146 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
146 147 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
147 148 9.605275 GTACTACCACATACGGATGTATATAGA 57.395 37.037 22.62 10.32 44.82 1.98
148 149 9.387257 TGTACTACCACATACGGATGTATATAG 57.613 37.037 14.23 16.35 44.82 1.31
149 150 9.910267 ATGTACTACCACATACGGATGTATATA 57.090 33.333 14.23 5.36 44.82 0.86
150 151 8.818622 ATGTACTACCACATACGGATGTATAT 57.181 34.615 14.23 4.37 44.82 0.86
151 152 8.640063 AATGTACTACCACATACGGATGTATA 57.360 34.615 14.23 8.27 44.82 1.47
152 153 7.534723 AATGTACTACCACATACGGATGTAT 57.465 36.000 14.23 7.46 44.82 2.29
153 154 6.964807 AATGTACTACCACATACGGATGTA 57.035 37.500 14.23 0.00 44.82 2.29
155 156 6.277605 TCAAATGTACTACCACATACGGATG 58.722 40.000 5.94 5.94 38.19 3.51
156 157 6.474140 TCAAATGTACTACCACATACGGAT 57.526 37.500 0.00 0.00 38.19 4.18
157 158 5.918426 TCAAATGTACTACCACATACGGA 57.082 39.130 0.00 0.00 38.19 4.69
158 159 6.971527 TTTCAAATGTACTACCACATACGG 57.028 37.500 0.00 0.00 38.19 4.02
159 160 8.420374 AGATTTCAAATGTACTACCACATACG 57.580 34.615 0.00 0.00 38.19 3.06
186 187 8.520351 CCTTCCGTTCCTAAATATTTGTCTTTT 58.480 33.333 11.05 0.00 0.00 2.27
187 188 7.886446 TCCTTCCGTTCCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
188 189 7.399634 TCCTTCCGTTCCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
189 190 6.954232 TCCTTCCGTTCCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
190 191 6.822170 ACTCCTTCCGTTCCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
191 192 6.718294 ACTCCTTCCGTTCCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
192 193 8.904099 ATACTCCTTCCGTTCCTAAATATTTG 57.096 34.615 11.05 1.40 0.00 2.32
193 194 9.916360 AAATACTCCTTCCGTTCCTAAATATTT 57.084 29.630 5.89 5.89 0.00 1.40
194 195 9.338622 CAAATACTCCTTCCGTTCCTAAATATT 57.661 33.333 0.00 0.00 0.00 1.28
195 196 8.711170 TCAAATACTCCTTCCGTTCCTAAATAT 58.289 33.333 0.00 0.00 0.00 1.28
196 197 8.081517 TCAAATACTCCTTCCGTTCCTAAATA 57.918 34.615 0.00 0.00 0.00 1.40
197 198 6.954232 TCAAATACTCCTTCCGTTCCTAAAT 58.046 36.000 0.00 0.00 0.00 1.40
198 199 6.211986 TCTCAAATACTCCTTCCGTTCCTAAA 59.788 38.462 0.00 0.00 0.00 1.85
199 200 5.718130 TCTCAAATACTCCTTCCGTTCCTAA 59.282 40.000 0.00 0.00 0.00 2.69
200 201 5.266788 TCTCAAATACTCCTTCCGTTCCTA 58.733 41.667 0.00 0.00 0.00 2.94
201 202 4.094476 TCTCAAATACTCCTTCCGTTCCT 58.906 43.478 0.00 0.00 0.00 3.36
202 203 4.467198 TCTCAAATACTCCTTCCGTTCC 57.533 45.455 0.00 0.00 0.00 3.62
203 204 5.699458 TGTTTCTCAAATACTCCTTCCGTTC 59.301 40.000 0.00 0.00 0.00 3.95
204 205 5.617252 TGTTTCTCAAATACTCCTTCCGTT 58.383 37.500 0.00 0.00 0.00 4.44
205 206 5.223449 TGTTTCTCAAATACTCCTTCCGT 57.777 39.130 0.00 0.00 0.00 4.69
206 207 9.712305 ATATATGTTTCTCAAATACTCCTTCCG 57.288 33.333 0.00 0.00 0.00 4.30
211 212 9.599322 CGCAAATATATGTTTCTCAAATACTCC 57.401 33.333 0.00 0.00 0.00 3.85
212 213 9.599322 CCGCAAATATATGTTTCTCAAATACTC 57.401 33.333 0.00 0.00 0.00 2.59
213 214 8.076178 GCCGCAAATATATGTTTCTCAAATACT 58.924 33.333 0.00 0.00 0.00 2.12
214 215 8.076178 AGCCGCAAATATATGTTTCTCAAATAC 58.924 33.333 0.00 0.00 0.00 1.89
215 216 8.165239 AGCCGCAAATATATGTTTCTCAAATA 57.835 30.769 0.00 0.00 0.00 1.40
216 217 7.042797 AGCCGCAAATATATGTTTCTCAAAT 57.957 32.000 0.00 0.00 0.00 2.32
217 218 6.449635 AGCCGCAAATATATGTTTCTCAAA 57.550 33.333 0.00 0.00 0.00 2.69
218 219 6.094742 TCAAGCCGCAAATATATGTTTCTCAA 59.905 34.615 0.00 0.00 0.00 3.02
219 220 5.588246 TCAAGCCGCAAATATATGTTTCTCA 59.412 36.000 0.00 0.00 0.00 3.27
220 221 5.909610 GTCAAGCCGCAAATATATGTTTCTC 59.090 40.000 0.00 0.00 0.00 2.87
221 222 5.590259 AGTCAAGCCGCAAATATATGTTTCT 59.410 36.000 0.00 0.00 0.00 2.52
222 223 5.682862 CAGTCAAGCCGCAAATATATGTTTC 59.317 40.000 0.00 0.00 0.00 2.78
223 224 5.450412 CCAGTCAAGCCGCAAATATATGTTT 60.450 40.000 0.00 0.00 0.00 2.83
224 225 4.036734 CCAGTCAAGCCGCAAATATATGTT 59.963 41.667 0.00 0.00 0.00 2.71
225 226 3.565482 CCAGTCAAGCCGCAAATATATGT 59.435 43.478 0.00 0.00 0.00 2.29
226 227 3.058016 CCCAGTCAAGCCGCAAATATATG 60.058 47.826 0.00 0.00 0.00 1.78
227 228 3.149196 CCCAGTCAAGCCGCAAATATAT 58.851 45.455 0.00 0.00 0.00 0.86
228 229 2.571212 CCCAGTCAAGCCGCAAATATA 58.429 47.619 0.00 0.00 0.00 0.86
229 230 1.392589 CCCAGTCAAGCCGCAAATAT 58.607 50.000 0.00 0.00 0.00 1.28
230 231 1.312371 GCCCAGTCAAGCCGCAAATA 61.312 55.000 0.00 0.00 0.00 1.40
231 232 2.639327 GCCCAGTCAAGCCGCAAAT 61.639 57.895 0.00 0.00 0.00 2.32
232 233 3.294493 GCCCAGTCAAGCCGCAAA 61.294 61.111 0.00 0.00 0.00 3.68
237 238 3.553095 AAGACGGCCCAGTCAAGCC 62.553 63.158 12.61 0.00 46.17 4.35
278 279 2.177531 CATTCAGCAGCGGTGTGC 59.822 61.111 17.07 2.16 44.35 4.57
279 280 2.693762 CCCATTCAGCAGCGGTGTG 61.694 63.158 17.07 12.87 32.43 3.82
311 312 5.009811 TGGGTAAACAAATTTCTGTTACCCG 59.990 40.000 28.18 6.74 45.01 5.28
345 346 4.920112 CAACCACACACCCGGCGA 62.920 66.667 9.30 0.00 0.00 5.54
349 350 2.539338 CGTTCCAACCACACACCCG 61.539 63.158 0.00 0.00 0.00 5.28
350 351 2.190841 CCGTTCCAACCACACACCC 61.191 63.158 0.00 0.00 0.00 4.61
351 352 0.748729 TTCCGTTCCAACCACACACC 60.749 55.000 0.00 0.00 0.00 4.16
352 353 0.379316 GTTCCGTTCCAACCACACAC 59.621 55.000 0.00 0.00 0.00 3.82
353 354 0.035343 TGTTCCGTTCCAACCACACA 60.035 50.000 0.00 0.00 0.00 3.72
354 355 1.096416 TTGTTCCGTTCCAACCACAC 58.904 50.000 0.00 0.00 0.00 3.82
355 356 1.835494 TTTGTTCCGTTCCAACCACA 58.165 45.000 0.00 0.00 0.00 4.17
356 357 2.480587 CCTTTTGTTCCGTTCCAACCAC 60.481 50.000 0.00 0.00 0.00 4.16
357 358 1.751924 CCTTTTGTTCCGTTCCAACCA 59.248 47.619 0.00 0.00 0.00 3.67
367 368 3.261981 TCGATAGGCTCCTTTTGTTCC 57.738 47.619 0.00 0.00 0.00 3.62
380 381 2.732412 ACCAGCAATCGATCGATAGG 57.268 50.000 29.57 26.75 33.97 2.57
434 472 1.362355 GGTGCTGTTTCCGTTTGGG 59.638 57.895 0.00 0.00 35.24 4.12
464 502 1.209504 GAGCCCACTTATGTAGCACCA 59.790 52.381 5.94 0.00 0.00 4.17
465 503 1.209504 TGAGCCCACTTATGTAGCACC 59.790 52.381 5.94 0.00 0.00 5.01
466 504 2.280628 GTGAGCCCACTTATGTAGCAC 58.719 52.381 0.00 0.00 40.10 4.40
467 505 1.209504 GGTGAGCCCACTTATGTAGCA 59.790 52.381 0.00 0.00 42.77 3.49
469 507 3.270877 GTTGGTGAGCCCACTTATGTAG 58.729 50.000 0.00 0.00 45.19 2.74
470 508 2.026636 GGTTGGTGAGCCCACTTATGTA 60.027 50.000 0.00 0.00 45.19 2.29
471 509 1.271926 GGTTGGTGAGCCCACTTATGT 60.272 52.381 0.00 0.00 45.19 2.29
472 510 1.271871 TGGTTGGTGAGCCCACTTATG 60.272 52.381 0.00 0.00 45.19 1.90
481 521 1.903404 CCTTGGGTGGTTGGTGAGC 60.903 63.158 0.00 0.00 0.00 4.26
485 525 2.366153 ATTCGCCTTGGGTGGTTGGT 62.366 55.000 0.00 0.00 33.43 3.67
492 532 1.270147 GCGTCTATATTCGCCTTGGGT 60.270 52.381 9.54 0.00 45.54 4.51
522 562 1.078637 GCCCTTTGGTCTCCGGTAC 60.079 63.158 0.00 0.54 0.00 3.34
523 563 1.536907 TGCCCTTTGGTCTCCGGTA 60.537 57.895 0.00 0.00 0.00 4.02
524 564 2.852075 TGCCCTTTGGTCTCCGGT 60.852 61.111 0.00 0.00 0.00 5.28
525 565 2.045926 CTGCCCTTTGGTCTCCGG 60.046 66.667 0.00 0.00 0.00 5.14
527 567 2.361737 GGCTGCCCTTTGGTCTCC 60.362 66.667 7.66 0.00 0.00 3.71
528 568 1.676967 CTGGCTGCCCTTTGGTCTC 60.677 63.158 17.53 0.00 0.00 3.36
529 569 1.504275 ATCTGGCTGCCCTTTGGTCT 61.504 55.000 17.53 0.00 0.00 3.85
530 570 1.000396 ATCTGGCTGCCCTTTGGTC 60.000 57.895 17.53 0.00 0.00 4.02
531 571 1.000396 GATCTGGCTGCCCTTTGGT 60.000 57.895 17.53 0.00 0.00 3.67
532 572 1.755783 GGATCTGGCTGCCCTTTGG 60.756 63.158 17.53 1.44 0.00 3.28
533 573 1.035932 CAGGATCTGGCTGCCCTTTG 61.036 60.000 17.53 4.01 0.00 2.77
559 607 0.532573 TCAGCTGATCTCGGTGGTTC 59.467 55.000 13.74 0.00 0.00 3.62
561 609 1.608717 GGTCAGCTGATCTCGGTGGT 61.609 60.000 21.47 0.00 0.00 4.16
562 610 1.142748 GGTCAGCTGATCTCGGTGG 59.857 63.158 21.47 0.00 0.00 4.61
564 612 1.893786 GTGGTCAGCTGATCTCGGT 59.106 57.895 26.71 0.00 0.00 4.69
713 771 1.895131 ACCCAGCAAATTACAAGCAGG 59.105 47.619 0.00 0.00 35.02 4.85
751 809 1.534476 TTACTCCCACGCTGACCCA 60.534 57.895 0.00 0.00 0.00 4.51
757 821 1.134670 GCAGATTCTTACTCCCACGCT 60.135 52.381 0.00 0.00 0.00 5.07
784 848 1.876799 CGTAGCATCGAGAGACCAGAT 59.123 52.381 0.00 0.00 46.97 2.90
791 855 8.848948 ATATGATTTAATCGTAGCATCGAGAG 57.151 34.615 11.80 0.00 43.00 3.20
860 924 3.927142 CGTTGAGTCCCTACTGATTGTTC 59.073 47.826 0.00 0.00 35.56 3.18
861 925 3.306780 CCGTTGAGTCCCTACTGATTGTT 60.307 47.826 0.00 0.00 35.56 2.83
862 926 2.233922 CCGTTGAGTCCCTACTGATTGT 59.766 50.000 0.00 0.00 35.56 2.71
945 1016 6.210796 TGCATTGAGAAGATTTGTTTGTCAG 58.789 36.000 0.00 0.00 30.75 3.51
947 1018 5.632347 CCTGCATTGAGAAGATTTGTTTGTC 59.368 40.000 0.00 0.00 0.00 3.18
1032 1105 2.139118 GCATGAAGATTAGCCTCCGAC 58.861 52.381 0.00 0.00 0.00 4.79
1088 1161 6.624423 TCGTTCAATTACTACCTACCTTGTC 58.376 40.000 0.00 0.00 0.00 3.18
1094 1167 7.566858 TCGTTTTCGTTCAATTACTACCTAC 57.433 36.000 0.00 0.00 44.46 3.18
1095 1168 7.218773 CGATCGTTTTCGTTCAATTACTACCTA 59.781 37.037 7.03 0.00 44.46 3.08
1096 1169 6.034256 CGATCGTTTTCGTTCAATTACTACCT 59.966 38.462 7.03 0.00 44.46 3.08
1097 1170 6.033831 TCGATCGTTTTCGTTCAATTACTACC 59.966 38.462 15.94 0.00 44.46 3.18
1110 1183 0.847983 GCGCAAGTCGATCGTTTTCG 60.848 55.000 15.94 16.63 42.22 3.46
1128 1201 1.670326 GTGAAATCACGAAACCACGC 58.330 50.000 0.00 0.00 37.10 5.34
1138 1211 1.635663 CTGGCCGGTCGTGAAATCAC 61.636 60.000 2.29 3.43 43.15 3.06
1139 1212 1.375396 CTGGCCGGTCGTGAAATCA 60.375 57.895 2.29 0.00 0.00 2.57
1140 1213 2.750888 GCTGGCCGGTCGTGAAATC 61.751 63.158 14.55 0.00 0.00 2.17
1172 1253 4.920340 GTCATCATCCATGCGAAGTAGTAG 59.080 45.833 0.00 0.00 31.70 2.57
1173 1254 4.584743 AGTCATCATCCATGCGAAGTAGTA 59.415 41.667 0.00 0.00 31.70 1.82
1174 1255 3.386078 AGTCATCATCCATGCGAAGTAGT 59.614 43.478 0.00 0.00 31.70 2.73
1231 1323 0.859232 CGCAACTTCTTACACGCTGT 59.141 50.000 0.00 0.00 0.00 4.40
1332 1424 1.400629 CGTTCTTCACCTGCAATGCTG 60.401 52.381 6.82 5.88 0.00 4.41
1351 1443 8.283291 GGCTAAAACAATCAAGGAATATAGACG 58.717 37.037 0.00 0.00 0.00 4.18
1352 1444 9.120538 TGGCTAAAACAATCAAGGAATATAGAC 57.879 33.333 0.00 0.00 0.00 2.59
1353 1445 9.866655 ATGGCTAAAACAATCAAGGAATATAGA 57.133 29.630 0.00 0.00 0.00 1.98
1356 1448 7.712205 GCAATGGCTAAAACAATCAAGGAATAT 59.288 33.333 0.00 0.00 36.96 1.28
1383 1475 6.665992 AACTACATGTGATGGTCGGTATAT 57.334 37.500 9.11 0.00 33.60 0.86
1518 1613 1.514678 TTGTGATGTCGCTTGGCACC 61.515 55.000 0.00 0.00 0.00 5.01
1519 1614 0.385974 GTTGTGATGTCGCTTGGCAC 60.386 55.000 0.00 0.00 0.00 5.01
1520 1615 0.534877 AGTTGTGATGTCGCTTGGCA 60.535 50.000 0.00 0.00 0.00 4.92
1578 1746 9.816354 CGTGATGTCAATCCACCATATATATAA 57.184 33.333 0.00 0.00 31.15 0.98
1579 1747 8.977412 ACGTGATGTCAATCCACCATATATATA 58.023 33.333 0.00 0.00 31.15 0.86
1651 1848 6.639632 ATTTGTTAACTGCAATGACTCAGT 57.360 33.333 7.22 0.00 44.64 3.41
1698 1895 4.844267 GGAACATTTACATCCGTGCATAC 58.156 43.478 0.00 0.00 0.00 2.39
1873 2071 8.509690 TCGGAGTGTTACTATGTAAGCATATAC 58.490 37.037 0.00 0.00 37.01 1.47
2001 2199 3.204306 ACATAGCACCTGGTGATCATG 57.796 47.619 30.23 25.84 35.23 3.07
2035 2233 5.753438 TGGCATGCTATCTAGTTTAAACTCG 59.247 40.000 23.76 17.71 40.37 4.18
2147 2345 0.874607 GTAAGTAGCATCGCCCACCG 60.875 60.000 0.00 0.00 38.61 4.94
2241 2439 5.975988 ACTAAATCCCTGAATAAGCCTCA 57.024 39.130 0.00 0.00 0.00 3.86
2308 2506 0.964700 CTCTCATATCAGGAGGCGCA 59.035 55.000 10.83 0.00 33.18 6.09
2364 2562 7.172190 CCATGCAGTAAGATAAGAACATACCAG 59.828 40.741 0.00 0.00 0.00 4.00
2494 2692 0.318441 CAAGCCAACTCGGAGTCTCA 59.682 55.000 11.71 0.00 36.56 3.27
2769 2967 6.428771 TCACCTTTTCCCTTAACATACTTTCG 59.571 38.462 0.00 0.00 0.00 3.46
2790 2988 9.545105 TTTATTATTTCATCATTGCCAATCACC 57.455 29.630 0.00 0.00 0.00 4.02
3116 3317 6.791303 TGCGTTATGACCCAATTTATTCTTC 58.209 36.000 0.00 0.00 0.00 2.87
3335 3615 4.420206 TGGTCTCTTCCTGATTCTCTTCA 58.580 43.478 0.00 0.00 0.00 3.02
3662 3942 7.336679 TGAATACCAATATTGTGTCCAGACTTG 59.663 37.037 14.25 0.00 30.77 3.16
4081 4361 1.079503 GTGGGCTCGATGAGTTTCAC 58.920 55.000 0.00 0.00 31.39 3.18
4082 4362 0.684535 TGTGGGCTCGATGAGTTTCA 59.315 50.000 0.00 0.00 31.39 2.69
4083 4363 1.734465 CTTGTGGGCTCGATGAGTTTC 59.266 52.381 0.00 0.00 31.39 2.78
4084 4364 1.611673 CCTTGTGGGCTCGATGAGTTT 60.612 52.381 0.00 0.00 31.39 2.66
4191 4474 1.477700 GCCATTGATGCCAGCAAACTA 59.522 47.619 0.00 0.00 0.00 2.24
4401 4684 8.702163 AGCAATAATTATTTGTAACTTGTGGC 57.298 30.769 8.01 4.64 0.00 5.01
4551 4834 6.968335 ACAATGTTGACGGTTACTAAAACAAC 59.032 34.615 0.00 0.00 37.31 3.32
4559 4842 5.179368 CAGATTCACAATGTTGACGGTTACT 59.821 40.000 0.00 0.00 0.00 2.24
4682 4965 4.278419 CGAACTTTGTTGGGGAAAATCTCT 59.722 41.667 0.00 0.00 0.00 3.10
4734 5017 6.925165 ACAATGATGTCACAAATCCAAAAGAC 59.075 34.615 0.00 0.00 33.41 3.01
4772 5055 8.232412 AGACCTATATACCTCAACAATACAGGA 58.768 37.037 0.00 0.00 0.00 3.86
4836 5119 4.561105 AGACAAACGAAAACAAAAGCCAA 58.439 34.783 0.00 0.00 0.00 4.52
5214 5518 8.070171 GTCGATATTTCACCAGGTAATCAATTG 58.930 37.037 0.00 0.00 0.00 2.32
5222 5526 5.862678 TGATGTCGATATTTCACCAGGTA 57.137 39.130 0.00 0.00 0.00 3.08
5225 5529 6.045318 AGAGTTGATGTCGATATTTCACCAG 58.955 40.000 0.00 0.00 0.00 4.00
5289 5595 1.745653 GCAGGCCATTACAAGAACTCC 59.254 52.381 5.01 0.00 0.00 3.85
5303 5609 2.686915 GCTAATCATATGATGGCAGGCC 59.313 50.000 25.91 2.62 35.58 5.19
5328 5634 3.937706 GAGAAGTCCTTGTCATGTCATGG 59.062 47.826 15.72 15.72 33.58 3.66
5388 5694 0.647410 CTCGACATTGCCGTCATGTC 59.353 55.000 8.21 8.21 40.76 3.06
5389 5695 0.246360 TCTCGACATTGCCGTCATGT 59.754 50.000 0.00 0.00 35.54 3.21
5390 5696 1.358877 TTCTCGACATTGCCGTCATG 58.641 50.000 0.00 0.00 35.54 3.07
5455 5779 3.821033 GTGCACTTGTTTCTTGGATAGGT 59.179 43.478 10.32 0.00 0.00 3.08
5498 5822 5.837979 ACATAGTCTGCCAGATAGATGTTCT 59.162 40.000 11.25 0.00 0.00 3.01
5503 5827 5.245751 CCTTGACATAGTCTGCCAGATAGAT 59.754 44.000 0.00 0.00 33.15 1.98
5504 5828 4.586421 CCTTGACATAGTCTGCCAGATAGA 59.414 45.833 0.00 0.00 33.15 1.98
5505 5829 4.798924 GCCTTGACATAGTCTGCCAGATAG 60.799 50.000 0.00 0.00 33.15 2.08
5506 5830 3.070159 GCCTTGACATAGTCTGCCAGATA 59.930 47.826 0.00 0.00 33.15 1.98
5556 5884 1.152355 CCCTCCCCCACAAAGCAAA 60.152 57.895 0.00 0.00 0.00 3.68
5557 5885 2.525592 CCCTCCCCCACAAAGCAA 59.474 61.111 0.00 0.00 0.00 3.91
5658 5991 9.533831 AGACATGTGTATATATACAGGTGATGA 57.466 33.333 27.47 11.10 41.22 2.92
5659 5992 9.794685 GAGACATGTGTATATATACAGGTGATG 57.205 37.037 27.47 23.85 41.22 3.07
5660 5993 9.533831 TGAGACATGTGTATATATACAGGTGAT 57.466 33.333 27.47 18.21 41.22 3.06
5661 5994 8.934023 TGAGACATGTGTATATATACAGGTGA 57.066 34.615 27.47 12.91 41.22 4.02
5662 5995 9.981114 TTTGAGACATGTGTATATATACAGGTG 57.019 33.333 27.47 23.19 41.22 4.00
5691 6024 5.470098 CCATAGCTGCGAGGTGTATATTTTT 59.530 40.000 0.00 0.00 0.00 1.94
5692 6025 4.997395 CCATAGCTGCGAGGTGTATATTTT 59.003 41.667 0.00 0.00 0.00 1.82
5693 6026 4.283467 TCCATAGCTGCGAGGTGTATATTT 59.717 41.667 0.00 0.00 0.00 1.40
5694 6027 3.832490 TCCATAGCTGCGAGGTGTATATT 59.168 43.478 0.00 0.00 0.00 1.28
5695 6028 3.431415 TCCATAGCTGCGAGGTGTATAT 58.569 45.455 0.00 0.00 0.00 0.86
5696 6029 2.820197 CTCCATAGCTGCGAGGTGTATA 59.180 50.000 0.00 0.00 0.00 1.47
5697 6030 1.615883 CTCCATAGCTGCGAGGTGTAT 59.384 52.381 0.00 0.00 0.00 2.29
5698 6031 1.032794 CTCCATAGCTGCGAGGTGTA 58.967 55.000 0.00 0.00 0.00 2.90
5699 6032 1.819229 CTCCATAGCTGCGAGGTGT 59.181 57.895 0.00 0.00 0.00 4.16
5700 6033 1.593750 GCTCCATAGCTGCGAGGTG 60.594 63.158 0.00 6.80 45.85 4.00
5701 6034 2.818132 GCTCCATAGCTGCGAGGT 59.182 61.111 0.00 0.00 45.85 3.85
5709 6042 0.317938 CACGTACCTCGCTCCATAGC 60.318 60.000 0.00 0.00 45.86 2.97
5710 6043 1.306148 TCACGTACCTCGCTCCATAG 58.694 55.000 0.00 0.00 44.19 2.23
5711 6044 1.607148 CATCACGTACCTCGCTCCATA 59.393 52.381 0.00 0.00 44.19 2.74
5712 6045 0.385751 CATCACGTACCTCGCTCCAT 59.614 55.000 0.00 0.00 44.19 3.41
5713 6046 0.678684 TCATCACGTACCTCGCTCCA 60.679 55.000 0.00 0.00 44.19 3.86
5714 6047 0.669077 ATCATCACGTACCTCGCTCC 59.331 55.000 0.00 0.00 44.19 4.70
5715 6048 1.759994 CATCATCACGTACCTCGCTC 58.240 55.000 0.00 0.00 44.19 5.03
5716 6049 0.249073 GCATCATCACGTACCTCGCT 60.249 55.000 0.00 0.00 44.19 4.93
5717 6050 1.215655 GGCATCATCACGTACCTCGC 61.216 60.000 0.00 0.00 44.19 5.03
5718 6051 0.102300 TGGCATCATCACGTACCTCG 59.898 55.000 0.00 0.00 46.00 4.63
5719 6052 2.533266 ATGGCATCATCACGTACCTC 57.467 50.000 0.00 0.00 0.00 3.85
5720 6053 3.005897 GTCTATGGCATCATCACGTACCT 59.994 47.826 1.65 0.00 34.96 3.08
5721 6054 3.318017 GTCTATGGCATCATCACGTACC 58.682 50.000 1.65 0.00 34.96 3.34
5722 6055 3.005897 AGGTCTATGGCATCATCACGTAC 59.994 47.826 1.65 0.00 34.96 3.67
5723 6056 3.230976 AGGTCTATGGCATCATCACGTA 58.769 45.455 1.65 0.00 34.96 3.57
5724 6057 2.042464 AGGTCTATGGCATCATCACGT 58.958 47.619 1.65 0.00 34.96 4.49
5725 6058 2.827800 AGGTCTATGGCATCATCACG 57.172 50.000 1.65 0.00 34.96 4.35
5726 6059 4.526262 ACTCTAGGTCTATGGCATCATCAC 59.474 45.833 1.65 0.00 34.96 3.06
5727 6060 4.745351 ACTCTAGGTCTATGGCATCATCA 58.255 43.478 1.65 0.00 34.96 3.07
5728 6061 5.359576 CCTACTCTAGGTCTATGGCATCATC 59.640 48.000 1.65 0.00 41.18 2.92
5729 6062 5.268387 CCTACTCTAGGTCTATGGCATCAT 58.732 45.833 1.65 0.00 41.18 2.45
5730 6063 4.509302 CCCTACTCTAGGTCTATGGCATCA 60.509 50.000 1.65 0.00 44.73 3.07
5731 6064 4.020543 CCCTACTCTAGGTCTATGGCATC 58.979 52.174 1.65 0.00 44.73 3.91
5732 6065 3.403051 ACCCTACTCTAGGTCTATGGCAT 59.597 47.826 4.88 4.88 44.73 4.40
5733 6066 2.789992 ACCCTACTCTAGGTCTATGGCA 59.210 50.000 0.00 0.00 44.73 4.92
5734 6067 3.529216 ACCCTACTCTAGGTCTATGGC 57.471 52.381 0.00 0.00 44.73 4.40
5741 6074 4.727792 GGTCTATGACCCTACTCTAGGT 57.272 50.000 5.49 0.00 46.19 3.08
5753 6086 6.174760 AGGACGTATAGATCAGGTCTATGAC 58.825 44.000 12.92 6.79 46.99 3.06
5754 6087 6.375830 AGGACGTATAGATCAGGTCTATGA 57.624 41.667 12.92 0.00 46.99 2.15
5755 6088 6.539464 GGTAGGACGTATAGATCAGGTCTATG 59.461 46.154 12.92 0.59 46.99 2.23
5757 6090 5.046014 GGGTAGGACGTATAGATCAGGTCTA 60.046 48.000 0.00 0.00 43.35 2.59
5758 6091 4.263418 GGGTAGGACGTATAGATCAGGTCT 60.263 50.000 0.00 0.00 41.11 3.85
5759 6092 4.009002 GGGTAGGACGTATAGATCAGGTC 58.991 52.174 0.00 0.00 0.00 3.85
5760 6093 3.396946 TGGGTAGGACGTATAGATCAGGT 59.603 47.826 0.00 0.00 0.00 4.00
5761 6094 4.030314 TGGGTAGGACGTATAGATCAGG 57.970 50.000 0.00 0.00 0.00 3.86
5762 6095 5.630661 CTTGGGTAGGACGTATAGATCAG 57.369 47.826 0.00 0.00 0.00 2.90
5772 6105 7.904148 CTAGAATAGTGACCTTGGGTAGGACG 61.904 50.000 0.00 0.00 41.01 4.79
5773 6106 5.302313 CTAGAATAGTGACCTTGGGTAGGAC 59.698 48.000 0.00 0.00 39.13 3.85
5774 6107 5.195146 TCTAGAATAGTGACCTTGGGTAGGA 59.805 44.000 0.00 0.00 42.60 2.94
5775 6108 5.455872 TCTAGAATAGTGACCTTGGGTAGG 58.544 45.833 0.00 0.00 44.24 3.18
5776 6109 6.608002 ACTTCTAGAATAGTGACCTTGGGTAG 59.392 42.308 5.44 0.00 40.38 3.18
5777 6110 6.500336 ACTTCTAGAATAGTGACCTTGGGTA 58.500 40.000 5.44 0.00 40.38 3.69
5778 6111 5.342866 ACTTCTAGAATAGTGACCTTGGGT 58.657 41.667 5.44 0.00 40.38 4.51
5779 6112 5.941555 ACTTCTAGAATAGTGACCTTGGG 57.058 43.478 5.44 0.00 40.38 4.12
5780 6113 7.342284 TCCTTACTTCTAGAATAGTGACCTTGG 59.658 40.741 5.44 0.00 40.38 3.61
5781 6114 8.192110 GTCCTTACTTCTAGAATAGTGACCTTG 58.808 40.741 5.44 0.00 40.38 3.61
5782 6115 7.894364 TGTCCTTACTTCTAGAATAGTGACCTT 59.106 37.037 5.44 0.00 40.38 3.50
5783 6116 7.411808 TGTCCTTACTTCTAGAATAGTGACCT 58.588 38.462 5.44 0.00 40.38 3.85
5784 6117 7.642082 TGTCCTTACTTCTAGAATAGTGACC 57.358 40.000 5.44 0.00 40.38 4.02
5785 6118 9.738832 GAATGTCCTTACTTCTAGAATAGTGAC 57.261 37.037 5.44 9.78 40.38 3.67
5786 6119 9.475620 TGAATGTCCTTACTTCTAGAATAGTGA 57.524 33.333 5.44 0.00 40.38 3.41
5796 6129 8.540388 TGCTATACTTTGAATGTCCTTACTTCT 58.460 33.333 0.00 0.00 0.00 2.85
5797 6130 8.718102 TGCTATACTTTGAATGTCCTTACTTC 57.282 34.615 0.00 0.00 0.00 3.01
5798 6131 9.167311 CTTGCTATACTTTGAATGTCCTTACTT 57.833 33.333 0.00 0.00 0.00 2.24
5799 6132 7.770897 CCTTGCTATACTTTGAATGTCCTTACT 59.229 37.037 0.00 0.00 0.00 2.24
5800 6133 7.769044 TCCTTGCTATACTTTGAATGTCCTTAC 59.231 37.037 0.00 0.00 0.00 2.34
5801 6134 7.857456 TCCTTGCTATACTTTGAATGTCCTTA 58.143 34.615 0.00 0.00 0.00 2.69
5802 6135 6.721318 TCCTTGCTATACTTTGAATGTCCTT 58.279 36.000 0.00 0.00 0.00 3.36
5803 6136 6.313519 TCCTTGCTATACTTTGAATGTCCT 57.686 37.500 0.00 0.00 0.00 3.85
5804 6137 7.573968 ATTCCTTGCTATACTTTGAATGTCC 57.426 36.000 0.00 0.00 0.00 4.02
5806 6139 8.993121 CGATATTCCTTGCTATACTTTGAATGT 58.007 33.333 0.00 0.00 0.00 2.71
5807 6140 9.208022 TCGATATTCCTTGCTATACTTTGAATG 57.792 33.333 0.00 0.00 0.00 2.67
5808 6141 9.950496 ATCGATATTCCTTGCTATACTTTGAAT 57.050 29.630 0.00 0.00 0.00 2.57
5809 6142 9.778741 AATCGATATTCCTTGCTATACTTTGAA 57.221 29.630 0.00 0.00 0.00 2.69
5810 6143 9.208022 CAATCGATATTCCTTGCTATACTTTGA 57.792 33.333 0.00 0.00 0.00 2.69
5811 6144 9.208022 TCAATCGATATTCCTTGCTATACTTTG 57.792 33.333 0.00 0.00 0.00 2.77
5812 6145 9.778741 TTCAATCGATATTCCTTGCTATACTTT 57.221 29.630 0.00 0.00 0.00 2.66
5813 6146 9.429359 CTTCAATCGATATTCCTTGCTATACTT 57.571 33.333 0.00 0.00 0.00 2.24
5814 6147 7.547370 GCTTCAATCGATATTCCTTGCTATACT 59.453 37.037 0.00 0.00 0.00 2.12
5815 6148 7.201565 GGCTTCAATCGATATTCCTTGCTATAC 60.202 40.741 0.00 0.00 0.00 1.47
5816 6149 6.818644 GGCTTCAATCGATATTCCTTGCTATA 59.181 38.462 0.00 0.00 0.00 1.31
5817 6150 5.645497 GGCTTCAATCGATATTCCTTGCTAT 59.355 40.000 0.00 0.00 0.00 2.97
5818 6151 4.997395 GGCTTCAATCGATATTCCTTGCTA 59.003 41.667 0.00 0.00 0.00 3.49
5819 6152 3.817647 GGCTTCAATCGATATTCCTTGCT 59.182 43.478 0.00 0.00 0.00 3.91
5820 6153 3.565482 TGGCTTCAATCGATATTCCTTGC 59.435 43.478 0.00 0.00 0.00 4.01
5821 6154 5.471116 TGATGGCTTCAATCGATATTCCTTG 59.529 40.000 0.00 0.00 0.00 3.61
5822 6155 5.624159 TGATGGCTTCAATCGATATTCCTT 58.376 37.500 0.00 0.00 0.00 3.36
5823 6156 5.233083 TGATGGCTTCAATCGATATTCCT 57.767 39.130 0.00 0.00 0.00 3.36
5824 6157 4.394300 CCTGATGGCTTCAATCGATATTCC 59.606 45.833 0.00 0.00 32.78 3.01
5825 6158 4.999950 ACCTGATGGCTTCAATCGATATTC 59.000 41.667 0.00 0.00 36.63 1.75
5826 6159 4.758674 CACCTGATGGCTTCAATCGATATT 59.241 41.667 0.00 0.00 36.63 1.28
5827 6160 4.321718 CACCTGATGGCTTCAATCGATAT 58.678 43.478 0.00 0.00 36.63 1.63
5828 6161 3.732212 CACCTGATGGCTTCAATCGATA 58.268 45.455 0.00 0.00 36.63 2.92
5829 6162 2.569059 CACCTGATGGCTTCAATCGAT 58.431 47.619 4.53 0.00 36.63 3.59
5830 6163 2.013563 GCACCTGATGGCTTCAATCGA 61.014 52.381 4.53 0.00 36.63 3.59
5831 6164 0.379669 GCACCTGATGGCTTCAATCG 59.620 55.000 4.53 0.00 36.63 3.34
5832 6165 1.466856 TGCACCTGATGGCTTCAATC 58.533 50.000 4.53 0.00 36.63 2.67
5833 6166 1.927487 TTGCACCTGATGGCTTCAAT 58.073 45.000 4.53 0.00 36.63 2.57
5834 6167 1.820519 GATTGCACCTGATGGCTTCAA 59.179 47.619 4.53 0.00 36.63 2.69
5835 6168 1.466856 GATTGCACCTGATGGCTTCA 58.533 50.000 2.86 2.86 36.63 3.02
5836 6169 0.743097 GGATTGCACCTGATGGCTTC 59.257 55.000 0.00 0.00 36.63 3.86
5837 6170 1.033746 CGGATTGCACCTGATGGCTT 61.034 55.000 0.00 0.00 36.63 4.35
5838 6171 1.452651 CGGATTGCACCTGATGGCT 60.453 57.895 0.00 0.00 36.63 4.75
5839 6172 3.113745 CGGATTGCACCTGATGGC 58.886 61.111 0.00 0.00 36.63 4.40
5840 6173 3.113745 GCGGATTGCACCTGATGG 58.886 61.111 0.00 0.00 45.45 3.51
5849 6182 2.125512 ACTGGTCGAGCGGATTGC 60.126 61.111 29.10 0.00 46.98 3.56
5850 6183 4.094684 GACTGGTCGAGCGGATTG 57.905 61.111 29.10 9.69 0.00 2.67
5860 6193 0.809385 TCCGAATGAGACGACTGGTC 59.191 55.000 0.00 0.00 46.45 4.02
5861 6194 1.475403 ATCCGAATGAGACGACTGGT 58.525 50.000 0.00 0.00 0.00 4.00
5862 6195 2.287668 GGTATCCGAATGAGACGACTGG 60.288 54.545 0.00 0.00 36.01 4.00
5863 6196 2.619177 AGGTATCCGAATGAGACGACTG 59.381 50.000 0.00 0.00 36.01 3.51
5864 6197 2.879646 GAGGTATCCGAATGAGACGACT 59.120 50.000 0.00 0.00 36.01 4.18
5865 6198 2.030981 GGAGGTATCCGAATGAGACGAC 60.031 54.545 0.00 0.00 36.01 4.34
5866 6199 2.228059 GGAGGTATCCGAATGAGACGA 58.772 52.381 0.00 0.00 36.01 4.20
5867 6200 2.708386 GGAGGTATCCGAATGAGACG 57.292 55.000 0.00 0.00 36.01 4.18
5877 6210 5.055144 GGTCGAGTAAAATTGGAGGTATCC 58.945 45.833 0.00 0.00 46.87 2.59
5878 6211 5.753921 CAGGTCGAGTAAAATTGGAGGTATC 59.246 44.000 0.00 0.00 0.00 2.24
5879 6212 5.396436 CCAGGTCGAGTAAAATTGGAGGTAT 60.396 44.000 0.00 0.00 0.00 2.73
5880 6213 4.081309 CCAGGTCGAGTAAAATTGGAGGTA 60.081 45.833 0.00 0.00 0.00 3.08
5881 6214 3.307480 CCAGGTCGAGTAAAATTGGAGGT 60.307 47.826 0.00 0.00 0.00 3.85
5882 6215 3.055385 TCCAGGTCGAGTAAAATTGGAGG 60.055 47.826 0.00 0.00 0.00 4.30
5883 6216 4.202245 TCCAGGTCGAGTAAAATTGGAG 57.798 45.455 0.00 0.00 0.00 3.86
5884 6217 4.224147 TCATCCAGGTCGAGTAAAATTGGA 59.776 41.667 0.00 0.00 37.61 3.53
5885 6218 4.513442 TCATCCAGGTCGAGTAAAATTGG 58.487 43.478 0.00 0.00 0.00 3.16
5886 6219 5.643777 ACTTCATCCAGGTCGAGTAAAATTG 59.356 40.000 0.00 0.00 0.00 2.32
5887 6220 5.805728 ACTTCATCCAGGTCGAGTAAAATT 58.194 37.500 0.00 0.00 0.00 1.82
5888 6221 5.046591 TGACTTCATCCAGGTCGAGTAAAAT 60.047 40.000 0.00 0.00 33.21 1.82
5889 6222 4.282449 TGACTTCATCCAGGTCGAGTAAAA 59.718 41.667 0.00 0.00 33.21 1.52
5890 6223 3.830178 TGACTTCATCCAGGTCGAGTAAA 59.170 43.478 0.00 0.00 33.21 2.01
5891 6224 3.427573 TGACTTCATCCAGGTCGAGTAA 58.572 45.455 0.00 0.00 33.21 2.24
5892 6225 3.081710 TGACTTCATCCAGGTCGAGTA 57.918 47.619 0.00 0.00 33.21 2.59
5893 6226 1.924731 TGACTTCATCCAGGTCGAGT 58.075 50.000 0.00 0.00 33.21 4.18
5894 6227 3.452474 GAATGACTTCATCCAGGTCGAG 58.548 50.000 0.00 0.00 35.10 4.04
5895 6228 2.159240 CGAATGACTTCATCCAGGTCGA 60.159 50.000 4.86 0.00 35.04 4.20
5896 6229 2.159240 TCGAATGACTTCATCCAGGTCG 60.159 50.000 4.56 4.56 35.10 4.79
5897 6230 3.526931 TCGAATGACTTCATCCAGGTC 57.473 47.619 0.00 0.00 35.10 3.85
5898 6231 3.452264 TGATCGAATGACTTCATCCAGGT 59.548 43.478 0.00 0.00 35.10 4.00
5899 6232 4.063998 TGATCGAATGACTTCATCCAGG 57.936 45.455 0.00 0.00 35.10 4.45
5900 6233 6.218746 TGTATGATCGAATGACTTCATCCAG 58.781 40.000 0.39 0.00 35.10 3.86
5901 6234 6.160576 TGTATGATCGAATGACTTCATCCA 57.839 37.500 0.39 0.00 35.10 3.41
5902 6235 5.636965 CCTGTATGATCGAATGACTTCATCC 59.363 44.000 0.39 0.00 35.10 3.51
5903 6236 6.450545 TCCTGTATGATCGAATGACTTCATC 58.549 40.000 0.39 0.00 35.10 2.92
5904 6237 6.410942 TCCTGTATGATCGAATGACTTCAT 57.589 37.500 2.77 2.77 38.41 2.57
5905 6238 5.852282 TCCTGTATGATCGAATGACTTCA 57.148 39.130 0.00 0.00 0.00 3.02
5906 6239 6.018669 GGTTTCCTGTATGATCGAATGACTTC 60.019 42.308 0.00 0.00 0.00 3.01
5907 6240 5.817816 GGTTTCCTGTATGATCGAATGACTT 59.182 40.000 0.00 0.00 0.00 3.01
5908 6241 5.104941 TGGTTTCCTGTATGATCGAATGACT 60.105 40.000 0.00 0.00 0.00 3.41
5909 6242 5.006746 GTGGTTTCCTGTATGATCGAATGAC 59.993 44.000 0.00 0.00 0.00 3.06
5910 6243 5.104941 AGTGGTTTCCTGTATGATCGAATGA 60.105 40.000 0.00 0.00 0.00 2.57
5911 6244 5.118990 AGTGGTTTCCTGTATGATCGAATG 58.881 41.667 0.00 0.00 0.00 2.67
5912 6245 5.104941 TGAGTGGTTTCCTGTATGATCGAAT 60.105 40.000 0.00 0.00 0.00 3.34
5913 6246 4.221924 TGAGTGGTTTCCTGTATGATCGAA 59.778 41.667 0.00 0.00 0.00 3.71
5914 6247 3.767131 TGAGTGGTTTCCTGTATGATCGA 59.233 43.478 0.00 0.00 0.00 3.59
5915 6248 4.115516 CTGAGTGGTTTCCTGTATGATCG 58.884 47.826 0.00 0.00 0.00 3.69
5916 6249 5.105146 ACTCTGAGTGGTTTCCTGTATGATC 60.105 44.000 10.00 0.00 0.00 2.92
5917 6250 4.780021 ACTCTGAGTGGTTTCCTGTATGAT 59.220 41.667 10.00 0.00 0.00 2.45
5918 6251 4.160329 ACTCTGAGTGGTTTCCTGTATGA 58.840 43.478 10.00 0.00 0.00 2.15
5919 6252 4.543590 ACTCTGAGTGGTTTCCTGTATG 57.456 45.455 10.00 0.00 0.00 2.39
5920 6253 5.084519 TGTACTCTGAGTGGTTTCCTGTAT 58.915 41.667 20.19 0.00 0.00 2.29
5921 6254 4.476297 TGTACTCTGAGTGGTTTCCTGTA 58.524 43.478 20.19 0.00 0.00 2.74
5922 6255 3.305720 TGTACTCTGAGTGGTTTCCTGT 58.694 45.455 20.19 0.00 0.00 4.00
5923 6256 3.574396 TCTGTACTCTGAGTGGTTTCCTG 59.426 47.826 20.19 5.58 0.00 3.86
5924 6257 3.845860 TCTGTACTCTGAGTGGTTTCCT 58.154 45.455 20.19 0.00 0.00 3.36
5925 6258 4.281182 TCTTCTGTACTCTGAGTGGTTTCC 59.719 45.833 20.19 2.30 0.00 3.13
5926 6259 5.224135 GTCTTCTGTACTCTGAGTGGTTTC 58.776 45.833 20.19 6.28 0.00 2.78
5927 6260 4.039366 GGTCTTCTGTACTCTGAGTGGTTT 59.961 45.833 20.19 0.00 0.00 3.27
5928 6261 3.574826 GGTCTTCTGTACTCTGAGTGGTT 59.425 47.826 20.19 0.00 0.00 3.67
5929 6262 3.158676 GGTCTTCTGTACTCTGAGTGGT 58.841 50.000 20.19 0.00 0.00 4.16
5930 6263 3.426615 AGGTCTTCTGTACTCTGAGTGG 58.573 50.000 20.19 10.10 0.00 4.00
5931 6264 5.492895 TCTAGGTCTTCTGTACTCTGAGTG 58.507 45.833 20.19 3.98 0.00 3.51
5932 6265 5.249852 ACTCTAGGTCTTCTGTACTCTGAGT 59.750 44.000 15.57 15.57 0.00 3.41
5933 6266 5.741011 ACTCTAGGTCTTCTGTACTCTGAG 58.259 45.833 2.45 2.45 0.00 3.35
5934 6267 5.248705 TGACTCTAGGTCTTCTGTACTCTGA 59.751 44.000 11.21 0.00 44.74 3.27
5935 6268 5.353123 GTGACTCTAGGTCTTCTGTACTCTG 59.647 48.000 11.21 0.00 44.74 3.35
5936 6269 5.249852 AGTGACTCTAGGTCTTCTGTACTCT 59.750 44.000 11.21 0.00 44.74 3.24
5937 6270 5.493809 AGTGACTCTAGGTCTTCTGTACTC 58.506 45.833 11.21 0.00 44.74 2.59
5938 6271 5.493809 GAGTGACTCTAGGTCTTCTGTACT 58.506 45.833 5.12 6.32 44.74 2.73
5939 6272 4.330620 CGAGTGACTCTAGGTCTTCTGTAC 59.669 50.000 11.26 0.00 44.74 2.90
5940 6273 4.505808 CGAGTGACTCTAGGTCTTCTGTA 58.494 47.826 11.26 0.00 44.74 2.74
5941 6274 3.340034 CGAGTGACTCTAGGTCTTCTGT 58.660 50.000 11.26 0.00 44.74 3.41
5942 6275 2.680841 CCGAGTGACTCTAGGTCTTCTG 59.319 54.545 11.26 0.00 44.74 3.02
5943 6276 2.356330 CCCGAGTGACTCTAGGTCTTCT 60.356 54.545 11.26 9.56 44.74 2.85
5944 6277 2.018515 CCCGAGTGACTCTAGGTCTTC 58.981 57.143 11.26 8.56 44.74 2.87
5945 6278 1.634459 TCCCGAGTGACTCTAGGTCTT 59.366 52.381 11.26 2.41 44.74 3.01
5946 6279 1.287217 TCCCGAGTGACTCTAGGTCT 58.713 55.000 11.26 0.00 44.74 3.85
5947 6280 1.950909 CATCCCGAGTGACTCTAGGTC 59.049 57.143 11.26 4.84 44.70 3.85
5948 6281 1.410365 CCATCCCGAGTGACTCTAGGT 60.410 57.143 11.26 0.00 37.26 3.08
5949 6282 1.323412 CCATCCCGAGTGACTCTAGG 58.677 60.000 11.26 11.20 38.43 3.02
5950 6283 0.671251 GCCATCCCGAGTGACTCTAG 59.329 60.000 11.26 1.74 0.00 2.43
5951 6284 0.033503 TGCCATCCCGAGTGACTCTA 60.034 55.000 11.26 0.00 0.00 2.43
5952 6285 0.904865 TTGCCATCCCGAGTGACTCT 60.905 55.000 11.26 0.00 0.00 3.24
5953 6286 0.741221 GTTGCCATCCCGAGTGACTC 60.741 60.000 1.65 1.65 0.00 3.36
5954 6287 1.296715 GTTGCCATCCCGAGTGACT 59.703 57.895 0.00 0.00 0.00 3.41
5955 6288 1.003839 TGTTGCCATCCCGAGTGAC 60.004 57.895 0.00 0.00 0.00 3.67
5956 6289 1.296392 CTGTTGCCATCCCGAGTGA 59.704 57.895 0.00 0.00 0.00 3.41
5957 6290 1.003355 ACTGTTGCCATCCCGAGTG 60.003 57.895 0.00 0.00 0.00 3.51
5958 6291 1.296715 GACTGTTGCCATCCCGAGT 59.703 57.895 0.00 0.00 0.00 4.18
5959 6292 0.742281 CTGACTGTTGCCATCCCGAG 60.742 60.000 0.00 0.00 0.00 4.63
5960 6293 1.296392 CTGACTGTTGCCATCCCGA 59.704 57.895 0.00 0.00 0.00 5.14
5961 6294 1.746615 CCTGACTGTTGCCATCCCG 60.747 63.158 0.00 0.00 0.00 5.14
5962 6295 2.048603 GCCTGACTGTTGCCATCCC 61.049 63.158 0.00 0.00 0.00 3.85
5963 6296 2.401766 CGCCTGACTGTTGCCATCC 61.402 63.158 0.00 0.00 0.00 3.51
5964 6297 1.672356 ACGCCTGACTGTTGCCATC 60.672 57.895 0.00 0.00 0.00 3.51
5965 6298 2.431683 ACGCCTGACTGTTGCCAT 59.568 55.556 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.