Multiple sequence alignment - TraesCS4B01G321200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G321200 chr4B 100.000 3457 0 0 1 3457 612259030 612262486 0.000000e+00 6384.0
1 TraesCS4B01G321200 chr4D 92.474 2405 82 36 410 2787 482689432 482691764 0.000000e+00 3347.0
2 TraesCS4B01G321200 chr5A 90.891 2492 128 38 531 2966 659880932 659878484 0.000000e+00 3253.0
3 TraesCS4B01G321200 chr5A 84.110 365 37 12 3094 3457 659878440 659878096 1.990000e-87 333.0
4 TraesCS4B01G321200 chr5A 89.524 105 3 4 437 537 659881218 659881118 3.620000e-25 126.0
5 TraesCS4B01G321200 chrUn 83.547 468 66 5 1376 1834 91652912 91652447 8.870000e-116 427.0
6 TraesCS4B01G321200 chrUn 83.439 471 67 5 1373 1834 239778791 239779259 8.870000e-116 427.0
7 TraesCS4B01G321200 chr6B 86.022 186 24 2 11 195 468252383 468252199 7.570000e-47 198.0
8 TraesCS4B01G321200 chr6B 94.737 38 2 0 1950 1987 89566059 89566022 3.730000e-05 60.2
9 TraesCS4B01G321200 chr6D 85.326 184 25 2 11 193 302578786 302578604 4.550000e-44 189.0
10 TraesCS4B01G321200 chr7B 79.184 245 51 0 1813 2057 748457716 748457960 1.650000e-38 171.0
11 TraesCS4B01G321200 chr7B 93.333 105 7 0 2970 3074 484454840 484454944 4.620000e-34 156.0
12 TraesCS4B01G321200 chr7B 90.000 60 6 0 1300 1359 601265253 601265312 1.030000e-10 78.7
13 TraesCS4B01G321200 chr6A 82.540 189 30 3 5 192 413212023 413212209 2.760000e-36 163.0
14 TraesCS4B01G321200 chr6A 91.150 113 8 2 2972 3083 315625368 315625257 5.980000e-33 152.0
15 TraesCS4B01G321200 chr6A 86.301 73 9 1 1300 1371 534597099 534597171 1.030000e-10 78.7
16 TraesCS4B01G321200 chr5B 95.000 100 5 0 2975 3074 695894739 695894838 1.280000e-34 158.0
17 TraesCS4B01G321200 chr5B 89.831 118 9 2 2977 3093 306435383 306435268 7.730000e-32 148.0
18 TraesCS4B01G321200 chr1D 94.118 102 6 0 2978 3079 420554542 420554643 4.620000e-34 156.0
19 TraesCS4B01G321200 chr7D 91.071 112 8 2 2965 3075 561963318 561963428 2.150000e-32 150.0
20 TraesCS4B01G321200 chr3B 89.256 121 11 2 2965 3084 490924668 490924549 2.150000e-32 150.0
21 TraesCS4B01G321200 chr2B 90.435 115 9 2 2969 3082 774087848 774087961 2.150000e-32 150.0
22 TraesCS4B01G321200 chr2B 93.617 47 2 1 12 58 524006550 524006595 6.190000e-08 69.4
23 TraesCS4B01G321200 chr3A 84.722 144 20 2 9 151 489305228 489305086 3.600000e-30 143.0
24 TraesCS4B01G321200 chr3A 78.689 122 22 3 1 122 360820201 360820318 1.030000e-10 78.7
25 TraesCS4B01G321200 chr1B 86.260 131 15 3 2950 3078 150801847 150801976 4.650000e-29 139.0
26 TraesCS4B01G321200 chr1B 91.781 73 6 0 1300 1372 561545958 561546030 6.100000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G321200 chr4B 612259030 612262486 3456 False 6384.000000 6384 100.000 1 3457 1 chr4B.!!$F1 3456
1 TraesCS4B01G321200 chr4D 482689432 482691764 2332 False 3347.000000 3347 92.474 410 2787 1 chr4D.!!$F1 2377
2 TraesCS4B01G321200 chr5A 659878096 659881218 3122 True 1237.333333 3253 88.175 437 3457 3 chr5A.!!$R1 3020

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
367 368 0.031449 GCTTGCTTTTACCGGTGCAA 59.969 50.0 23.78 23.78 42.16 4.08 F
982 1197 0.313043 CATTTCAGCGCCATCCATCC 59.687 55.0 2.29 0.00 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2295 2525 0.739112 CCGCTCTCTCTGCTTTCACC 60.739 60.0 0.0 0.0 0.0 4.02 R
2513 2758 0.036765 GCAAGGGATGTGTCGGTGTA 60.037 55.0 0.0 0.0 0.0 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.969117 GAACAACACATGAGCAACTCA 57.031 42.857 0.00 0.00 44.99 3.41
21 22 4.291540 GAACAACACATGAGCAACTCAA 57.708 40.909 0.00 0.00 44.04 3.02
22 23 3.976793 ACAACACATGAGCAACTCAAG 57.023 42.857 0.00 0.00 44.04 3.02
23 24 3.544684 ACAACACATGAGCAACTCAAGA 58.455 40.909 0.00 0.00 44.04 3.02
24 25 3.947196 ACAACACATGAGCAACTCAAGAA 59.053 39.130 0.00 0.00 44.04 2.52
25 26 4.398988 ACAACACATGAGCAACTCAAGAAA 59.601 37.500 0.00 0.00 44.04 2.52
26 27 4.825546 ACACATGAGCAACTCAAGAAAG 57.174 40.909 0.00 0.19 44.04 2.62
27 28 4.454678 ACACATGAGCAACTCAAGAAAGA 58.545 39.130 0.00 0.00 44.04 2.52
28 29 5.068636 ACACATGAGCAACTCAAGAAAGAT 58.931 37.500 0.00 0.00 44.04 2.40
29 30 5.533903 ACACATGAGCAACTCAAGAAAGATT 59.466 36.000 0.00 0.00 44.04 2.40
30 31 6.040166 ACACATGAGCAACTCAAGAAAGATTT 59.960 34.615 0.00 0.00 44.04 2.17
31 32 6.362551 CACATGAGCAACTCAAGAAAGATTTG 59.637 38.462 0.00 0.00 44.04 2.32
32 33 6.263842 ACATGAGCAACTCAAGAAAGATTTGA 59.736 34.615 0.00 0.00 44.04 2.69
33 34 6.889301 TGAGCAACTCAAGAAAGATTTGAT 57.111 33.333 0.00 0.00 37.57 2.57
34 35 7.281040 TGAGCAACTCAAGAAAGATTTGATT 57.719 32.000 0.00 0.00 37.57 2.57
35 36 7.143340 TGAGCAACTCAAGAAAGATTTGATTG 58.857 34.615 0.00 0.00 37.57 2.67
36 37 7.013559 TGAGCAACTCAAGAAAGATTTGATTGA 59.986 33.333 0.00 0.00 37.57 2.57
38 39 6.089150 GCAACTCAAGAAAGATTTGATTGAGC 59.911 38.462 19.80 10.51 46.88 4.26
39 40 6.889301 ACTCAAGAAAGATTTGATTGAGCA 57.111 33.333 19.80 0.00 46.88 4.26
40 41 6.675987 ACTCAAGAAAGATTTGATTGAGCAC 58.324 36.000 19.80 0.00 46.88 4.40
41 42 6.017400 TCAAGAAAGATTTGATTGAGCACC 57.983 37.500 0.00 0.00 30.03 5.01
42 43 5.771666 TCAAGAAAGATTTGATTGAGCACCT 59.228 36.000 0.00 0.00 30.03 4.00
43 44 5.640189 AGAAAGATTTGATTGAGCACCTG 57.360 39.130 0.00 0.00 0.00 4.00
44 45 3.863142 AAGATTTGATTGAGCACCTGC 57.137 42.857 0.00 0.00 42.49 4.85
55 56 2.670251 CACCTGCGGGCGGTTAAA 60.670 61.111 12.89 0.00 35.63 1.52
56 57 2.359478 ACCTGCGGGCGGTTAAAG 60.359 61.111 12.89 0.00 35.63 1.85
57 58 2.046700 CCTGCGGGCGGTTAAAGA 60.047 61.111 0.00 0.00 0.00 2.52
58 59 2.106683 CCTGCGGGCGGTTAAAGAG 61.107 63.158 0.00 0.00 0.00 2.85
59 60 2.046700 TGCGGGCGGTTAAAGAGG 60.047 61.111 0.00 0.00 0.00 3.69
60 61 2.266689 GCGGGCGGTTAAAGAGGA 59.733 61.111 0.00 0.00 0.00 3.71
61 62 1.153229 GCGGGCGGTTAAAGAGGAT 60.153 57.895 0.00 0.00 0.00 3.24
62 63 0.105408 GCGGGCGGTTAAAGAGGATA 59.895 55.000 0.00 0.00 0.00 2.59
63 64 1.473788 GCGGGCGGTTAAAGAGGATAA 60.474 52.381 0.00 0.00 0.00 1.75
64 65 2.207590 CGGGCGGTTAAAGAGGATAAC 58.792 52.381 0.00 0.00 33.47 1.89
65 66 2.159000 CGGGCGGTTAAAGAGGATAACT 60.159 50.000 0.00 0.00 34.44 2.24
66 67 3.068590 CGGGCGGTTAAAGAGGATAACTA 59.931 47.826 0.00 0.00 34.44 2.24
67 68 4.441913 CGGGCGGTTAAAGAGGATAACTAA 60.442 45.833 0.00 0.00 34.44 2.24
68 69 5.430886 GGGCGGTTAAAGAGGATAACTAAA 58.569 41.667 0.00 0.00 34.44 1.85
69 70 5.882000 GGGCGGTTAAAGAGGATAACTAAAA 59.118 40.000 0.00 0.00 34.44 1.52
70 71 6.375174 GGGCGGTTAAAGAGGATAACTAAAAA 59.625 38.462 0.00 0.00 34.44 1.94
71 72 7.246311 GGCGGTTAAAGAGGATAACTAAAAAC 58.754 38.462 0.00 0.00 34.44 2.43
72 73 7.094677 GGCGGTTAAAGAGGATAACTAAAAACA 60.095 37.037 0.00 0.00 34.44 2.83
73 74 8.456471 GCGGTTAAAGAGGATAACTAAAAACAT 58.544 33.333 0.00 0.00 34.44 2.71
80 81 9.686683 AAGAGGATAACTAAAAACATATGTGCT 57.313 29.630 9.63 0.00 0.00 4.40
174 175 8.841444 ACGATTTGATATGTGTTATTTTGAGC 57.159 30.769 0.00 0.00 0.00 4.26
175 176 8.677300 ACGATTTGATATGTGTTATTTTGAGCT 58.323 29.630 0.00 0.00 0.00 4.09
176 177 9.507280 CGATTTGATATGTGTTATTTTGAGCTT 57.493 29.630 0.00 0.00 0.00 3.74
179 180 8.969121 TTGATATGTGTTATTTTGAGCTTGTG 57.031 30.769 0.00 0.00 0.00 3.33
180 181 8.334263 TGATATGTGTTATTTTGAGCTTGTGA 57.666 30.769 0.00 0.00 0.00 3.58
181 182 8.791675 TGATATGTGTTATTTTGAGCTTGTGAA 58.208 29.630 0.00 0.00 0.00 3.18
182 183 8.970691 ATATGTGTTATTTTGAGCTTGTGAAC 57.029 30.769 0.00 0.00 0.00 3.18
183 184 6.449635 TGTGTTATTTTGAGCTTGTGAACT 57.550 33.333 0.00 0.00 0.00 3.01
184 185 6.862209 TGTGTTATTTTGAGCTTGTGAACTT 58.138 32.000 0.00 0.00 0.00 2.66
185 186 7.319646 TGTGTTATTTTGAGCTTGTGAACTTT 58.680 30.769 0.00 0.00 0.00 2.66
186 187 8.462811 TGTGTTATTTTGAGCTTGTGAACTTTA 58.537 29.630 0.00 0.00 0.00 1.85
187 188 9.296400 GTGTTATTTTGAGCTTGTGAACTTTAA 57.704 29.630 0.00 0.00 0.00 1.52
188 189 9.862371 TGTTATTTTGAGCTTGTGAACTTTAAA 57.138 25.926 0.00 0.00 0.00 1.52
215 216 6.611380 AAATTGCGCTAGTTTTAAATGACG 57.389 33.333 9.73 0.00 0.00 4.35
216 217 4.994220 TTGCGCTAGTTTTAAATGACGA 57.006 36.364 9.73 0.00 0.00 4.20
217 218 4.577687 TGCGCTAGTTTTAAATGACGAG 57.422 40.909 9.73 0.00 0.00 4.18
218 219 4.239304 TGCGCTAGTTTTAAATGACGAGA 58.761 39.130 9.73 0.00 0.00 4.04
219 220 4.090930 TGCGCTAGTTTTAAATGACGAGAC 59.909 41.667 9.73 0.00 0.00 3.36
220 221 4.492085 GCGCTAGTTTTAAATGACGAGACC 60.492 45.833 0.00 0.00 0.00 3.85
221 222 4.863131 CGCTAGTTTTAAATGACGAGACCT 59.137 41.667 4.82 0.00 0.00 3.85
222 223 5.220228 CGCTAGTTTTAAATGACGAGACCTG 60.220 44.000 4.82 0.00 0.00 4.00
223 224 5.446073 GCTAGTTTTAAATGACGAGACCTGC 60.446 44.000 4.82 0.00 0.00 4.85
224 225 4.642429 AGTTTTAAATGACGAGACCTGCT 58.358 39.130 0.00 0.00 0.00 4.24
225 226 5.790593 AGTTTTAAATGACGAGACCTGCTA 58.209 37.500 0.00 0.00 0.00 3.49
226 227 6.407202 AGTTTTAAATGACGAGACCTGCTAT 58.593 36.000 0.00 0.00 0.00 2.97
227 228 6.535508 AGTTTTAAATGACGAGACCTGCTATC 59.464 38.462 0.00 0.00 0.00 2.08
228 229 2.783828 AATGACGAGACCTGCTATCG 57.216 50.000 0.00 0.00 42.04 2.92
233 234 2.847441 ACGAGACCTGCTATCGTATCA 58.153 47.619 0.00 0.00 46.95 2.15
234 235 2.809119 ACGAGACCTGCTATCGTATCAG 59.191 50.000 0.00 0.00 46.95 2.90
235 236 2.809119 CGAGACCTGCTATCGTATCAGT 59.191 50.000 0.00 0.00 0.00 3.41
236 237 3.364465 CGAGACCTGCTATCGTATCAGTG 60.364 52.174 0.00 0.00 0.00 3.66
237 238 3.556999 AGACCTGCTATCGTATCAGTGT 58.443 45.455 0.00 0.00 0.00 3.55
238 239 3.566322 AGACCTGCTATCGTATCAGTGTC 59.434 47.826 0.00 0.00 32.87 3.67
239 240 2.623889 ACCTGCTATCGTATCAGTGTCC 59.376 50.000 0.00 0.00 0.00 4.02
240 241 2.350868 CCTGCTATCGTATCAGTGTCCG 60.351 54.545 0.00 0.00 0.00 4.79
241 242 2.290916 CTGCTATCGTATCAGTGTCCGT 59.709 50.000 0.00 0.00 0.00 4.69
242 243 2.032924 TGCTATCGTATCAGTGTCCGTG 59.967 50.000 0.00 0.00 0.00 4.94
243 244 2.604855 GCTATCGTATCAGTGTCCGTGG 60.605 54.545 0.00 0.00 0.00 4.94
244 245 1.758936 ATCGTATCAGTGTCCGTGGA 58.241 50.000 0.00 0.00 0.00 4.02
245 246 1.758936 TCGTATCAGTGTCCGTGGAT 58.241 50.000 0.00 0.00 0.00 3.41
246 247 2.097036 TCGTATCAGTGTCCGTGGATT 58.903 47.619 0.00 0.00 0.00 3.01
247 248 2.159296 TCGTATCAGTGTCCGTGGATTG 60.159 50.000 0.00 0.00 0.00 2.67
248 249 2.159296 CGTATCAGTGTCCGTGGATTGA 60.159 50.000 0.00 0.00 0.00 2.57
249 250 3.490933 CGTATCAGTGTCCGTGGATTGAT 60.491 47.826 14.06 14.06 32.03 2.57
250 251 3.634397 ATCAGTGTCCGTGGATTGATT 57.366 42.857 0.00 0.00 0.00 2.57
251 252 2.698803 TCAGTGTCCGTGGATTGATTG 58.301 47.619 0.00 0.00 0.00 2.67
252 253 1.131126 CAGTGTCCGTGGATTGATTGC 59.869 52.381 0.00 0.00 0.00 3.56
253 254 1.164411 GTGTCCGTGGATTGATTGCA 58.836 50.000 0.00 0.00 0.00 4.08
254 255 1.135689 GTGTCCGTGGATTGATTGCAC 60.136 52.381 0.00 0.00 42.80 4.57
258 259 3.996825 GTGGATTGATTGCACGGAC 57.003 52.632 0.00 0.00 36.91 4.79
259 260 0.096976 GTGGATTGATTGCACGGACG 59.903 55.000 0.00 0.00 36.91 4.79
260 261 0.036858 TGGATTGATTGCACGGACGA 60.037 50.000 0.00 0.00 0.00 4.20
261 262 1.083489 GGATTGATTGCACGGACGAA 58.917 50.000 0.00 0.00 0.00 3.85
262 263 1.670811 GGATTGATTGCACGGACGAAT 59.329 47.619 0.00 0.00 0.00 3.34
263 264 2.869801 GGATTGATTGCACGGACGAATA 59.130 45.455 0.00 0.00 0.00 1.75
264 265 3.498397 GGATTGATTGCACGGACGAATAT 59.502 43.478 0.00 0.00 0.00 1.28
265 266 3.942539 TTGATTGCACGGACGAATATG 57.057 42.857 0.00 0.00 0.00 1.78
266 267 2.209273 TGATTGCACGGACGAATATGG 58.791 47.619 0.00 0.00 0.00 2.74
267 268 2.210116 GATTGCACGGACGAATATGGT 58.790 47.619 0.00 0.00 0.00 3.55
268 269 1.364721 TTGCACGGACGAATATGGTG 58.635 50.000 0.00 0.00 0.00 4.17
269 270 0.248012 TGCACGGACGAATATGGTGT 59.752 50.000 0.00 0.00 0.00 4.16
270 271 0.928229 GCACGGACGAATATGGTGTC 59.072 55.000 0.00 0.00 0.00 3.67
271 272 1.567504 CACGGACGAATATGGTGTCC 58.432 55.000 9.99 9.99 46.91 4.02
273 274 3.284197 GGACGAATATGGTGTCCGG 57.716 57.895 0.00 0.00 42.42 5.14
274 275 0.462789 GGACGAATATGGTGTCCGGT 59.537 55.000 0.00 0.00 42.42 5.28
275 276 1.134610 GGACGAATATGGTGTCCGGTT 60.135 52.381 0.00 0.00 42.42 4.44
276 277 2.624636 GACGAATATGGTGTCCGGTTT 58.375 47.619 0.00 0.00 0.00 3.27
277 278 3.430651 GGACGAATATGGTGTCCGGTTTA 60.431 47.826 0.00 0.00 42.42 2.01
278 279 3.788937 ACGAATATGGTGTCCGGTTTAG 58.211 45.455 0.00 0.00 0.00 1.85
279 280 3.196254 ACGAATATGGTGTCCGGTTTAGT 59.804 43.478 0.00 0.00 0.00 2.24
280 281 3.554324 CGAATATGGTGTCCGGTTTAGTG 59.446 47.826 0.00 0.00 0.00 2.74
281 282 4.510571 GAATATGGTGTCCGGTTTAGTGT 58.489 43.478 0.00 0.00 0.00 3.55
282 283 2.467566 ATGGTGTCCGGTTTAGTGTC 57.532 50.000 0.00 0.00 0.00 3.67
283 284 1.121378 TGGTGTCCGGTTTAGTGTCA 58.879 50.000 0.00 0.00 0.00 3.58
284 285 1.695242 TGGTGTCCGGTTTAGTGTCAT 59.305 47.619 0.00 0.00 0.00 3.06
285 286 2.073816 GGTGTCCGGTTTAGTGTCATG 58.926 52.381 0.00 0.00 0.00 3.07
286 287 2.289195 GGTGTCCGGTTTAGTGTCATGA 60.289 50.000 0.00 0.00 0.00 3.07
287 288 3.395639 GTGTCCGGTTTAGTGTCATGAA 58.604 45.455 0.00 0.00 0.00 2.57
288 289 3.432252 GTGTCCGGTTTAGTGTCATGAAG 59.568 47.826 0.00 0.00 0.00 3.02
289 290 3.322541 TGTCCGGTTTAGTGTCATGAAGA 59.677 43.478 0.00 0.00 0.00 2.87
290 291 4.202274 TGTCCGGTTTAGTGTCATGAAGAA 60.202 41.667 0.00 0.00 0.00 2.52
291 292 4.935808 GTCCGGTTTAGTGTCATGAAGAAT 59.064 41.667 0.00 0.00 0.00 2.40
292 293 5.411669 GTCCGGTTTAGTGTCATGAAGAATT 59.588 40.000 0.00 0.00 0.00 2.17
293 294 5.411361 TCCGGTTTAGTGTCATGAAGAATTG 59.589 40.000 0.00 0.00 0.00 2.32
294 295 5.411361 CCGGTTTAGTGTCATGAAGAATTGA 59.589 40.000 0.00 0.00 0.00 2.57
295 296 6.072728 CCGGTTTAGTGTCATGAAGAATTGAA 60.073 38.462 0.00 0.00 0.00 2.69
296 297 7.017645 CGGTTTAGTGTCATGAAGAATTGAAG 58.982 38.462 0.00 0.00 0.00 3.02
297 298 7.095229 CGGTTTAGTGTCATGAAGAATTGAAGA 60.095 37.037 0.00 0.00 0.00 2.87
298 299 8.734386 GGTTTAGTGTCATGAAGAATTGAAGAT 58.266 33.333 0.00 0.00 0.00 2.40
299 300 9.552114 GTTTAGTGTCATGAAGAATTGAAGATG 57.448 33.333 0.00 0.00 0.00 2.90
300 301 6.192234 AGTGTCATGAAGAATTGAAGATGC 57.808 37.500 0.00 0.00 0.00 3.91
301 302 5.944599 AGTGTCATGAAGAATTGAAGATGCT 59.055 36.000 0.00 0.00 0.00 3.79
302 303 7.108194 AGTGTCATGAAGAATTGAAGATGCTA 58.892 34.615 0.00 0.00 0.00 3.49
303 304 7.774157 AGTGTCATGAAGAATTGAAGATGCTAT 59.226 33.333 0.00 0.00 0.00 2.97
304 305 7.856398 GTGTCATGAAGAATTGAAGATGCTATG 59.144 37.037 0.00 0.00 0.00 2.23
305 306 7.771826 TGTCATGAAGAATTGAAGATGCTATGA 59.228 33.333 0.00 0.00 0.00 2.15
306 307 8.283992 GTCATGAAGAATTGAAGATGCTATGAG 58.716 37.037 0.00 0.00 0.00 2.90
307 308 8.208903 TCATGAAGAATTGAAGATGCTATGAGA 58.791 33.333 0.00 0.00 0.00 3.27
308 309 8.837389 CATGAAGAATTGAAGATGCTATGAGAA 58.163 33.333 0.00 0.00 0.00 2.87
309 310 8.975663 TGAAGAATTGAAGATGCTATGAGAAT 57.024 30.769 0.00 0.00 0.00 2.40
310 311 9.053840 TGAAGAATTGAAGATGCTATGAGAATC 57.946 33.333 0.00 0.00 29.93 2.52
311 312 7.655236 AGAATTGAAGATGCTATGAGAATCG 57.345 36.000 0.00 0.00 35.34 3.34
312 313 7.440198 AGAATTGAAGATGCTATGAGAATCGA 58.560 34.615 0.00 0.00 35.34 3.59
313 314 8.095792 AGAATTGAAGATGCTATGAGAATCGAT 58.904 33.333 0.00 0.00 35.34 3.59
314 315 7.598189 ATTGAAGATGCTATGAGAATCGATG 57.402 36.000 0.00 0.00 35.34 3.84
315 316 6.336842 TGAAGATGCTATGAGAATCGATGA 57.663 37.500 0.00 0.00 35.34 2.92
316 317 6.388278 TGAAGATGCTATGAGAATCGATGAG 58.612 40.000 0.00 0.00 35.34 2.90
317 318 6.208204 TGAAGATGCTATGAGAATCGATGAGA 59.792 38.462 0.00 0.00 35.34 3.27
318 319 6.587206 AGATGCTATGAGAATCGATGAGAA 57.413 37.500 0.00 0.00 35.34 2.87
319 320 6.990798 AGATGCTATGAGAATCGATGAGAAA 58.009 36.000 0.00 0.00 35.34 2.52
320 321 7.440198 AGATGCTATGAGAATCGATGAGAAAA 58.560 34.615 0.00 0.00 35.34 2.29
321 322 6.834959 TGCTATGAGAATCGATGAGAAAAC 57.165 37.500 0.00 0.00 38.61 2.43
322 323 5.755375 TGCTATGAGAATCGATGAGAAAACC 59.245 40.000 0.00 0.00 38.61 3.27
323 324 5.755375 GCTATGAGAATCGATGAGAAAACCA 59.245 40.000 0.00 0.00 38.61 3.67
324 325 6.258727 GCTATGAGAATCGATGAGAAAACCAA 59.741 38.462 0.00 0.00 38.61 3.67
325 326 7.041508 GCTATGAGAATCGATGAGAAAACCAAT 60.042 37.037 0.00 0.00 38.61 3.16
326 327 6.426980 TGAGAATCGATGAGAAAACCAATG 57.573 37.500 0.00 0.00 38.61 2.82
327 328 6.172630 TGAGAATCGATGAGAAAACCAATGA 58.827 36.000 0.00 0.00 38.61 2.57
328 329 6.092670 TGAGAATCGATGAGAAAACCAATGAC 59.907 38.462 0.00 0.00 38.61 3.06
329 330 6.176183 AGAATCGATGAGAAAACCAATGACT 58.824 36.000 0.00 0.00 0.00 3.41
330 331 5.808042 ATCGATGAGAAAACCAATGACTG 57.192 39.130 0.00 0.00 0.00 3.51
331 332 4.893608 TCGATGAGAAAACCAATGACTGA 58.106 39.130 0.00 0.00 0.00 3.41
332 333 4.931601 TCGATGAGAAAACCAATGACTGAG 59.068 41.667 0.00 0.00 0.00 3.35
333 334 4.436584 CGATGAGAAAACCAATGACTGAGC 60.437 45.833 0.00 0.00 0.00 4.26
334 335 3.819368 TGAGAAAACCAATGACTGAGCA 58.181 40.909 0.00 0.00 0.00 4.26
335 336 3.565482 TGAGAAAACCAATGACTGAGCAC 59.435 43.478 0.00 0.00 0.00 4.40
336 337 2.549754 AGAAAACCAATGACTGAGCACG 59.450 45.455 0.00 0.00 0.00 5.34
337 338 1.967319 AAACCAATGACTGAGCACGT 58.033 45.000 0.00 0.00 0.00 4.49
338 339 1.229428 AACCAATGACTGAGCACGTG 58.771 50.000 12.28 12.28 0.00 4.49
339 340 1.230635 ACCAATGACTGAGCACGTGC 61.231 55.000 32.79 32.79 42.49 5.34
343 344 4.064491 GACTGAGCACGTGCGCAC 62.064 66.667 37.69 30.42 45.55 5.34
359 360 3.472263 CACCCGTGCTTGCTTTTAC 57.528 52.632 0.00 0.00 0.00 2.01
360 361 0.039527 CACCCGTGCTTGCTTTTACC 60.040 55.000 0.00 0.00 0.00 2.85
361 362 1.209127 CCCGTGCTTGCTTTTACCG 59.791 57.895 0.00 0.00 0.00 4.02
362 363 1.209127 CCGTGCTTGCTTTTACCGG 59.791 57.895 0.00 0.00 0.00 5.28
363 364 1.512156 CCGTGCTTGCTTTTACCGGT 61.512 55.000 13.98 13.98 0.00 5.28
364 365 0.385473 CGTGCTTGCTTTTACCGGTG 60.385 55.000 19.93 0.10 0.00 4.94
365 366 0.663269 GTGCTTGCTTTTACCGGTGC 60.663 55.000 19.93 13.05 0.00 5.01
366 367 1.103987 TGCTTGCTTTTACCGGTGCA 61.104 50.000 19.93 15.96 0.00 4.57
367 368 0.031449 GCTTGCTTTTACCGGTGCAA 59.969 50.000 23.78 23.78 42.16 4.08
369 370 1.394618 TTGCTTTTACCGGTGCAAGT 58.605 45.000 22.15 0.00 39.98 3.16
370 371 1.394618 TGCTTTTACCGGTGCAAGTT 58.605 45.000 19.93 0.00 32.12 2.66
371 372 1.066303 TGCTTTTACCGGTGCAAGTTG 59.934 47.619 19.93 0.00 32.12 3.16
372 373 1.766069 CTTTTACCGGTGCAAGTTGC 58.234 50.000 19.93 21.17 45.29 4.17
386 387 5.162000 GCAAGTTGCAATATACAGAGTCC 57.838 43.478 22.90 0.00 44.26 3.85
387 388 4.035675 GCAAGTTGCAATATACAGAGTCCC 59.964 45.833 22.90 0.00 44.26 4.46
388 389 5.431765 CAAGTTGCAATATACAGAGTCCCT 58.568 41.667 0.59 0.00 0.00 4.20
389 390 5.700402 AGTTGCAATATACAGAGTCCCTT 57.300 39.130 0.59 0.00 0.00 3.95
390 391 5.675538 AGTTGCAATATACAGAGTCCCTTC 58.324 41.667 0.59 0.00 0.00 3.46
391 392 4.689612 TGCAATATACAGAGTCCCTTCC 57.310 45.455 0.00 0.00 0.00 3.46
392 393 4.037222 TGCAATATACAGAGTCCCTTCCA 58.963 43.478 0.00 0.00 0.00 3.53
393 394 4.473196 TGCAATATACAGAGTCCCTTCCAA 59.527 41.667 0.00 0.00 0.00 3.53
394 395 5.045213 TGCAATATACAGAGTCCCTTCCAAA 60.045 40.000 0.00 0.00 0.00 3.28
395 396 5.885912 GCAATATACAGAGTCCCTTCCAAAA 59.114 40.000 0.00 0.00 0.00 2.44
396 397 6.377146 GCAATATACAGAGTCCCTTCCAAAAA 59.623 38.462 0.00 0.00 0.00 1.94
417 418 4.749245 AAAAGTTGCAACATACCGAGAG 57.251 40.909 30.11 0.00 0.00 3.20
511 516 1.107538 TCGGATCGATGTCTCCACCC 61.108 60.000 0.54 0.00 0.00 4.61
512 517 1.109920 CGGATCGATGTCTCCACCCT 61.110 60.000 0.54 0.00 0.00 4.34
513 518 1.818131 CGGATCGATGTCTCCACCCTA 60.818 57.143 0.54 0.00 0.00 3.53
514 519 2.317040 GGATCGATGTCTCCACCCTAA 58.683 52.381 0.54 0.00 0.00 2.69
537 542 5.121105 ACTAACGGCCACACTATTATTTCC 58.879 41.667 2.24 0.00 0.00 3.13
589 786 2.502130 TGCCGAATACCATCACCTTGTA 59.498 45.455 0.00 0.00 0.00 2.41
591 788 3.560068 GCCGAATACCATCACCTTGTAAG 59.440 47.826 0.00 0.00 0.00 2.34
594 791 4.034048 CGAATACCATCACCTTGTAAGCAC 59.966 45.833 0.00 0.00 0.00 4.40
596 793 5.950544 ATACCATCACCTTGTAAGCACTA 57.049 39.130 0.00 0.00 0.00 2.74
597 794 4.844349 ACCATCACCTTGTAAGCACTAT 57.156 40.909 0.00 0.00 0.00 2.12
598 795 5.179452 ACCATCACCTTGTAAGCACTATT 57.821 39.130 0.00 0.00 0.00 1.73
599 796 6.308015 ACCATCACCTTGTAAGCACTATTA 57.692 37.500 0.00 0.00 0.00 0.98
600 797 6.900194 ACCATCACCTTGTAAGCACTATTAT 58.100 36.000 0.00 0.00 0.00 1.28
601 798 6.992715 ACCATCACCTTGTAAGCACTATTATC 59.007 38.462 0.00 0.00 0.00 1.75
602 799 6.146184 CCATCACCTTGTAAGCACTATTATCG 59.854 42.308 0.00 0.00 0.00 2.92
603 800 6.459670 TCACCTTGTAAGCACTATTATCGA 57.540 37.500 0.00 0.00 0.00 3.59
604 801 7.050970 TCACCTTGTAAGCACTATTATCGAT 57.949 36.000 2.16 2.16 0.00 3.59
605 802 6.923508 TCACCTTGTAAGCACTATTATCGATG 59.076 38.462 8.54 0.00 0.00 3.84
646 850 5.618056 TGTAGTATTAGAATAGACCGGCG 57.382 43.478 0.00 0.00 0.00 6.46
680 884 0.678950 CACAATGACCCCCACCAAAC 59.321 55.000 0.00 0.00 0.00 2.93
913 1124 5.188555 TGCTCATTTTATCCTCACACTCTCT 59.811 40.000 0.00 0.00 0.00 3.10
920 1131 1.735920 CTCACACTCTCTGCGTGCC 60.736 63.158 0.00 0.00 35.84 5.01
933 1144 2.746359 GTGCCCACAGCTCACTCT 59.254 61.111 0.00 0.00 44.23 3.24
982 1197 0.313043 CATTTCAGCGCCATCCATCC 59.687 55.000 2.29 0.00 0.00 3.51
995 1210 2.573869 CATCCTCAGTGCGTCGGT 59.426 61.111 0.00 0.00 0.00 4.69
999 1214 2.430921 CTCAGTGCGTCGGTCACC 60.431 66.667 0.00 0.00 35.14 4.02
1306 1527 2.401195 GCCATCAAGAACGCGCTC 59.599 61.111 5.73 2.65 0.00 5.03
1348 1569 0.318762 ACTGGGACGTCAAGAAGCTC 59.681 55.000 18.91 0.00 0.00 4.09
1351 1572 1.270305 TGGGACGTCAAGAAGCTCAAG 60.270 52.381 18.91 0.00 0.00 3.02
1744 1965 4.077184 TTCGCGCCCAAGGACGAT 62.077 61.111 0.00 0.00 34.01 3.73
2286 2516 2.752354 CCTCTCTACTGTGACTGTGAGG 59.248 54.545 11.24 11.24 35.05 3.86
2287 2517 3.560239 CCTCTCTACTGTGACTGTGAGGA 60.560 52.174 17.11 7.66 40.56 3.71
2289 2519 4.013050 TCTCTACTGTGACTGTGAGGATG 58.987 47.826 5.32 0.00 0.00 3.51
2292 2522 0.979665 CTGTGACTGTGAGGATGGGT 59.020 55.000 0.00 0.00 0.00 4.51
2318 2548 2.177594 AAAGCAGAGAGAGCGGTGGG 62.178 60.000 0.00 0.00 37.01 4.61
2319 2549 4.154347 GCAGAGAGAGCGGTGGGG 62.154 72.222 0.00 0.00 0.00 4.96
2367 2597 3.087031 CAGCCCATCACATTCTTCTTGT 58.913 45.455 0.00 0.00 0.00 3.16
2377 2610 6.169094 TCACATTCTTCTTGTCATCCTCTTC 58.831 40.000 0.00 0.00 0.00 2.87
2378 2611 5.936372 CACATTCTTCTTGTCATCCTCTTCA 59.064 40.000 0.00 0.00 0.00 3.02
2383 2616 2.005451 CTTGTCATCCTCTTCAAGCCG 58.995 52.381 0.00 0.00 32.54 5.52
2421 2661 0.526954 CATGAGCCGCAGCAATTTCC 60.527 55.000 0.00 0.00 43.56 3.13
2439 2679 7.550196 GCAATTTCCCTGTGTAATTCATGAAAT 59.450 33.333 13.09 6.75 32.68 2.17
2440 2680 9.439500 CAATTTCCCTGTGTAATTCATGAAATT 57.561 29.630 13.09 9.80 40.67 1.82
2475 2720 2.735134 ACATCTCGTTCTTTTACGTGCC 59.265 45.455 0.00 0.00 42.01 5.01
2482 2727 1.950828 TCTTTTACGTGCCGGTTTCA 58.049 45.000 1.90 0.00 0.00 2.69
2483 2728 2.286872 TCTTTTACGTGCCGGTTTCAA 58.713 42.857 1.90 0.00 0.00 2.69
2492 2737 1.946768 TGCCGGTTTCAACAGAAGAAG 59.053 47.619 1.90 0.00 0.00 2.85
2502 2747 3.945285 TCAACAGAAGAAGAAAGCCGTTT 59.055 39.130 0.00 0.00 0.00 3.60
2503 2748 3.971032 ACAGAAGAAGAAAGCCGTTTG 57.029 42.857 0.00 0.00 0.00 2.93
2504 2749 2.033424 ACAGAAGAAGAAAGCCGTTTGC 59.967 45.455 0.00 0.00 41.71 3.68
2525 2770 0.108615 GAGCAGCTACACCGACACAT 60.109 55.000 0.00 0.00 0.00 3.21
2640 2890 4.883585 TGTAAATTGGATGGAGCAGATCAC 59.116 41.667 0.00 0.00 0.00 3.06
2707 2957 1.320344 TGGATCGAGGTCGTCCTTGG 61.320 60.000 14.95 5.42 45.24 3.61
2782 3032 1.834188 GCTTCAAAATCCGGGGAGAA 58.166 50.000 0.00 0.00 0.00 2.87
2787 3037 1.282157 CAAAATCCGGGGAGAAGAGGT 59.718 52.381 0.00 0.00 0.00 3.85
2821 3084 3.512516 GCCATTCCACTCGCAGCC 61.513 66.667 0.00 0.00 0.00 4.85
2822 3085 3.197790 CCATTCCACTCGCAGCCG 61.198 66.667 0.00 0.00 0.00 5.52
2823 3086 3.197790 CATTCCACTCGCAGCCGG 61.198 66.667 0.00 0.00 34.56 6.13
2868 3131 4.246458 GCTATCAGTTCATACGGATTCCC 58.754 47.826 0.00 0.00 39.45 3.97
2869 3132 4.262463 GCTATCAGTTCATACGGATTCCCA 60.262 45.833 0.00 0.00 39.45 4.37
2871 3134 2.169769 TCAGTTCATACGGATTCCCACC 59.830 50.000 0.00 0.00 0.00 4.61
2872 3135 2.093181 CAGTTCATACGGATTCCCACCA 60.093 50.000 0.00 0.00 0.00 4.17
2875 3138 3.943671 TCATACGGATTCCCACCAATT 57.056 42.857 0.00 0.00 0.00 2.32
2876 3139 4.243793 TCATACGGATTCCCACCAATTT 57.756 40.909 0.00 0.00 0.00 1.82
2877 3140 4.605183 TCATACGGATTCCCACCAATTTT 58.395 39.130 0.00 0.00 0.00 1.82
2878 3141 5.756918 TCATACGGATTCCCACCAATTTTA 58.243 37.500 0.00 0.00 0.00 1.52
2879 3142 6.188407 TCATACGGATTCCCACCAATTTTAA 58.812 36.000 0.00 0.00 0.00 1.52
2881 3144 7.343316 TCATACGGATTCCCACCAATTTTAATT 59.657 33.333 0.00 0.00 0.00 1.40
2886 3149 6.097129 GGATTCCCACCAATTTTAATTACCGA 59.903 38.462 0.00 0.00 0.00 4.69
2889 3152 4.401202 CCCACCAATTTTAATTACCGAGCT 59.599 41.667 0.00 0.00 0.00 4.09
2891 3154 6.459161 CCCACCAATTTTAATTACCGAGCTAC 60.459 42.308 0.00 0.00 0.00 3.58
2892 3155 6.317893 CCACCAATTTTAATTACCGAGCTACT 59.682 38.462 0.00 0.00 0.00 2.57
2908 3177 2.613223 GCTACTCCAAGTTCAGGACCAC 60.613 54.545 0.00 0.00 0.00 4.16
2909 3178 1.807814 ACTCCAAGTTCAGGACCACT 58.192 50.000 0.00 0.00 0.00 4.00
2926 3197 4.425577 CCACTGCTTGGTCTGAAATTAC 57.574 45.455 0.00 0.00 41.10 1.89
2932 3203 6.998673 ACTGCTTGGTCTGAAATTACTTAACT 59.001 34.615 0.00 0.00 0.00 2.24
2938 3209 6.086871 GGTCTGAAATTACTTAACTGCAAGC 58.913 40.000 0.00 0.00 37.60 4.01
2944 3215 2.638480 ACTTAACTGCAAGCAGACCA 57.362 45.000 27.17 9.53 46.30 4.02
2948 3219 4.342092 ACTTAACTGCAAGCAGACCAAAAT 59.658 37.500 27.17 1.15 46.30 1.82
2950 3221 4.935352 AACTGCAAGCAGACCAAAATAA 57.065 36.364 27.17 0.00 46.30 1.40
2960 3231 8.299570 CAAGCAGACCAAAATAATAAACTCTGT 58.700 33.333 0.00 0.00 0.00 3.41
2963 3234 7.910683 GCAGACCAAAATAATAAACTCTGTAGC 59.089 37.037 0.00 0.00 0.00 3.58
2966 3237 9.556030 GACCAAAATAATAAACTCTGTAGCAAC 57.444 33.333 0.00 0.00 0.00 4.17
2967 3238 8.520351 ACCAAAATAATAAACTCTGTAGCAACC 58.480 33.333 0.00 0.00 0.00 3.77
2969 3240 9.906660 CAAAATAATAAACTCTGTAGCAACCAA 57.093 29.630 0.00 0.00 0.00 3.67
2974 3245 8.630054 AATAAACTCTGTAGCAACCAATAACA 57.370 30.769 0.00 0.00 0.00 2.41
2975 3246 5.941948 AACTCTGTAGCAACCAATAACAC 57.058 39.130 0.00 0.00 0.00 3.32
2976 3247 4.968259 ACTCTGTAGCAACCAATAACACA 58.032 39.130 0.00 0.00 0.00 3.72
2977 3248 5.560724 ACTCTGTAGCAACCAATAACACAT 58.439 37.500 0.00 0.00 0.00 3.21
2978 3249 6.707290 ACTCTGTAGCAACCAATAACACATA 58.293 36.000 0.00 0.00 0.00 2.29
2979 3250 6.594159 ACTCTGTAGCAACCAATAACACATAC 59.406 38.462 0.00 0.00 0.00 2.39
2980 3251 6.707290 TCTGTAGCAACCAATAACACATACT 58.293 36.000 0.00 0.00 0.00 2.12
2981 3252 6.816640 TCTGTAGCAACCAATAACACATACTC 59.183 38.462 0.00 0.00 0.00 2.59
2983 3254 4.270008 AGCAACCAATAACACATACTCCC 58.730 43.478 0.00 0.00 0.00 4.30
2984 3255 3.064820 GCAACCAATAACACATACTCCCG 59.935 47.826 0.00 0.00 0.00 5.14
2985 3256 2.914059 ACCAATAACACATACTCCCGC 58.086 47.619 0.00 0.00 0.00 6.13
2987 3258 1.864711 CAATAACACATACTCCCGCCG 59.135 52.381 0.00 0.00 0.00 6.46
2988 3259 1.117150 ATAACACATACTCCCGCCGT 58.883 50.000 0.00 0.00 0.00 5.68
2989 3260 0.457035 TAACACATACTCCCGCCGTC 59.543 55.000 0.00 0.00 0.00 4.79
2990 3261 2.106332 CACATACTCCCGCCGTCC 59.894 66.667 0.00 0.00 0.00 4.79
2991 3262 3.152400 ACATACTCCCGCCGTCCC 61.152 66.667 0.00 0.00 0.00 4.46
2992 3263 3.151710 CATACTCCCGCCGTCCCA 61.152 66.667 0.00 0.00 0.00 4.37
2999 3270 0.677414 TCCCGCCGTCCCAAAATAAC 60.677 55.000 0.00 0.00 0.00 1.89
3000 3271 0.678684 CCCGCCGTCCCAAAATAACT 60.679 55.000 0.00 0.00 0.00 2.24
3001 3272 0.450184 CCGCCGTCCCAAAATAACTG 59.550 55.000 0.00 0.00 0.00 3.16
3004 3275 2.433436 GCCGTCCCAAAATAACTGTCT 58.567 47.619 0.00 0.00 0.00 3.41
3005 3276 2.418976 GCCGTCCCAAAATAACTGTCTC 59.581 50.000 0.00 0.00 0.00 3.36
3006 3277 3.670625 CCGTCCCAAAATAACTGTCTCA 58.329 45.455 0.00 0.00 0.00 3.27
3007 3278 4.069304 CCGTCCCAAAATAACTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
3009 3280 4.378459 CGTCCCAAAATAACTGTCTCAAGC 60.378 45.833 0.00 0.00 0.00 4.01
3010 3281 4.762251 GTCCCAAAATAACTGTCTCAAGCT 59.238 41.667 0.00 0.00 0.00 3.74
3011 3282 5.241728 GTCCCAAAATAACTGTCTCAAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
3012 3283 6.430000 GTCCCAAAATAACTGTCTCAAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
3013 3284 6.655003 TCCCAAAATAACTGTCTCAAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
3014 3285 6.431234 CCCAAAATAACTGTCTCAAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
3015 3286 7.606456 CCCAAAATAACTGTCTCAAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
3016 3287 9.167311 CCAAAATAACTGTCTCAAGCTTAGTAT 57.833 33.333 0.00 0.00 0.00 2.12
3024 3295 9.726438 ACTGTCTCAAGCTTAGTATAAATTTGT 57.274 29.630 0.00 0.00 0.00 2.83
3049 3320 7.148355 ACTAGAGCTAGTACAAAGTTGAGAC 57.852 40.000 8.35 0.00 43.98 3.36
3050 3321 6.715718 ACTAGAGCTAGTACAAAGTTGAGACA 59.284 38.462 8.35 0.00 43.98 3.41
3051 3322 5.774630 AGAGCTAGTACAAAGTTGAGACAC 58.225 41.667 0.00 0.00 0.00 3.67
3052 3323 5.536916 AGAGCTAGTACAAAGTTGAGACACT 59.463 40.000 0.00 0.00 0.00 3.55
3053 3324 6.041069 AGAGCTAGTACAAAGTTGAGACACTT 59.959 38.462 0.00 0.00 38.74 3.16
3054 3325 7.230913 AGAGCTAGTACAAAGTTGAGACACTTA 59.769 37.037 0.00 0.00 35.87 2.24
3055 3326 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
3056 3327 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
3057 3328 8.989980 GCTAGTACAAAGTTGAGACACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
3064 3335 9.370126 CAAAGTTGAGACACTTATTTTAAGACG 57.630 33.333 1.47 0.00 35.87 4.18
3065 3336 7.653767 AGTTGAGACACTTATTTTAAGACGG 57.346 36.000 1.47 0.00 0.00 4.79
3066 3337 7.439381 AGTTGAGACACTTATTTTAAGACGGA 58.561 34.615 1.47 0.00 0.00 4.69
3067 3338 7.599245 AGTTGAGACACTTATTTTAAGACGGAG 59.401 37.037 1.47 0.00 0.00 4.63
3068 3339 6.395629 TGAGACACTTATTTTAAGACGGAGG 58.604 40.000 1.47 0.00 0.00 4.30
3069 3340 5.731591 AGACACTTATTTTAAGACGGAGGG 58.268 41.667 1.47 0.00 0.00 4.30
3070 3341 5.482878 AGACACTTATTTTAAGACGGAGGGA 59.517 40.000 1.47 0.00 0.00 4.20
3071 3342 5.731591 ACACTTATTTTAAGACGGAGGGAG 58.268 41.667 1.47 0.00 0.00 4.30
3072 3343 5.247792 ACACTTATTTTAAGACGGAGGGAGT 59.752 40.000 1.47 0.00 0.00 3.85
3073 3344 6.438425 ACACTTATTTTAAGACGGAGGGAGTA 59.562 38.462 1.47 0.00 0.00 2.59
3074 3345 6.979238 CACTTATTTTAAGACGGAGGGAGTAG 59.021 42.308 1.47 0.00 0.00 2.57
3075 3346 6.666980 ACTTATTTTAAGACGGAGGGAGTAGT 59.333 38.462 1.47 0.00 0.00 2.73
3076 3347 7.836183 ACTTATTTTAAGACGGAGGGAGTAGTA 59.164 37.037 1.47 0.00 0.00 1.82
3077 3348 5.904362 TTTTAAGACGGAGGGAGTAGTAC 57.096 43.478 0.00 0.00 0.00 2.73
3078 3349 4.574674 TTAAGACGGAGGGAGTAGTACA 57.425 45.455 2.52 0.00 0.00 2.90
3079 3350 2.713863 AGACGGAGGGAGTAGTACAG 57.286 55.000 2.52 0.00 0.00 2.74
3080 3351 1.914798 AGACGGAGGGAGTAGTACAGT 59.085 52.381 2.52 0.00 0.00 3.55
3081 3352 3.110705 AGACGGAGGGAGTAGTACAGTA 58.889 50.000 2.52 0.00 0.00 2.74
3082 3353 3.521126 AGACGGAGGGAGTAGTACAGTAA 59.479 47.826 2.52 0.00 0.00 2.24
3083 3354 3.615155 ACGGAGGGAGTAGTACAGTAAC 58.385 50.000 2.52 0.00 0.00 2.50
3084 3355 3.265479 ACGGAGGGAGTAGTACAGTAACT 59.735 47.826 2.52 0.00 0.00 2.24
3085 3356 4.471386 ACGGAGGGAGTAGTACAGTAACTA 59.529 45.833 2.52 0.00 0.00 2.24
3086 3357 5.055812 CGGAGGGAGTAGTACAGTAACTAG 58.944 50.000 2.52 0.00 32.69 2.57
3087 3358 5.396213 CGGAGGGAGTAGTACAGTAACTAGT 60.396 48.000 2.52 0.00 38.14 2.57
3088 3359 6.054941 GGAGGGAGTAGTACAGTAACTAGTC 58.945 48.000 2.52 9.41 45.63 2.59
3089 3360 6.126796 GGAGGGAGTAGTACAGTAACTAGTCT 60.127 46.154 15.03 0.00 45.64 3.24
3090 3361 7.269522 AGGGAGTAGTACAGTAACTAGTCTT 57.730 40.000 15.03 5.32 45.64 3.01
3091 3362 7.337938 AGGGAGTAGTACAGTAACTAGTCTTC 58.662 42.308 15.03 9.85 45.64 2.87
3092 3363 7.037730 AGGGAGTAGTACAGTAACTAGTCTTCA 60.038 40.741 15.03 0.00 45.64 3.02
3093 3364 7.280652 GGGAGTAGTACAGTAACTAGTCTTCAG 59.719 44.444 15.03 0.00 45.64 3.02
3094 3365 7.201635 GGAGTAGTACAGTAACTAGTCTTCAGC 60.202 44.444 15.03 0.09 45.64 4.26
3095 3366 7.166851 AGTAGTACAGTAACTAGTCTTCAGCA 58.833 38.462 2.52 0.00 31.32 4.41
3096 3367 6.503589 AGTACAGTAACTAGTCTTCAGCAG 57.496 41.667 0.00 0.00 0.00 4.24
3107 3378 8.312669 ACTAGTCTTCAGCAGGTAAATAAGAT 57.687 34.615 0.00 0.00 0.00 2.40
3109 3380 7.187824 AGTCTTCAGCAGGTAAATAAGATCA 57.812 36.000 0.00 0.00 0.00 2.92
3113 3384 5.065914 TCAGCAGGTAAATAAGATCATGCC 58.934 41.667 0.00 0.00 38.15 4.40
3125 3396 2.139118 GATCATGCCGGAGCTACTTTC 58.861 52.381 5.05 0.00 40.80 2.62
3128 3399 2.092968 TCATGCCGGAGCTACTTTCATT 60.093 45.455 5.05 0.00 40.80 2.57
3133 3404 3.430374 GCCGGAGCTACTTTCATTACAGA 60.430 47.826 5.05 0.00 35.50 3.41
3136 3407 4.438336 CGGAGCTACTTTCATTACAGACGA 60.438 45.833 0.00 0.00 0.00 4.20
3137 3408 5.038033 GGAGCTACTTTCATTACAGACGAG 58.962 45.833 0.00 0.00 0.00 4.18
3149 3420 6.312918 TCATTACAGACGAGAAATTAAGGCAC 59.687 38.462 0.00 0.00 0.00 5.01
3150 3421 4.002906 ACAGACGAGAAATTAAGGCACA 57.997 40.909 0.00 0.00 0.00 4.57
3157 3428 5.168569 CGAGAAATTAAGGCACACACTCTA 58.831 41.667 0.00 0.00 0.00 2.43
3158 3429 5.812642 CGAGAAATTAAGGCACACACTCTAT 59.187 40.000 0.00 0.00 0.00 1.98
3159 3430 6.237942 CGAGAAATTAAGGCACACACTCTATG 60.238 42.308 0.00 0.00 0.00 2.23
3160 3431 6.711277 AGAAATTAAGGCACACACTCTATGA 58.289 36.000 0.00 0.00 0.00 2.15
3161 3432 7.341805 AGAAATTAAGGCACACACTCTATGAT 58.658 34.615 0.00 0.00 0.00 2.45
3162 3433 6.932356 AATTAAGGCACACACTCTATGATG 57.068 37.500 0.00 0.00 0.00 3.07
3163 3434 3.988976 AAGGCACACACTCTATGATGT 57.011 42.857 0.00 0.00 0.00 3.06
3172 3443 4.753233 ACACTCTATGATGTGAAGTGAGC 58.247 43.478 7.73 0.00 37.59 4.26
3175 3446 6.183360 ACACTCTATGATGTGAAGTGAGCTAG 60.183 42.308 7.73 0.00 37.59 3.42
3176 3447 5.890985 ACTCTATGATGTGAAGTGAGCTAGT 59.109 40.000 0.00 0.00 0.00 2.57
3177 3448 7.012799 CACTCTATGATGTGAAGTGAGCTAGTA 59.987 40.741 0.00 0.00 36.38 1.82
3178 3449 7.012894 ACTCTATGATGTGAAGTGAGCTAGTAC 59.987 40.741 0.00 0.00 0.00 2.73
3179 3450 7.057264 TCTATGATGTGAAGTGAGCTAGTACT 58.943 38.462 0.00 0.00 0.00 2.73
3180 3451 5.984695 TGATGTGAAGTGAGCTAGTACTT 57.015 39.130 0.00 9.50 39.67 2.24
3181 3452 5.714047 TGATGTGAAGTGAGCTAGTACTTG 58.286 41.667 13.37 0.00 37.27 3.16
3182 3453 5.243954 TGATGTGAAGTGAGCTAGTACTTGT 59.756 40.000 13.37 0.00 37.27 3.16
3183 3454 6.433093 TGATGTGAAGTGAGCTAGTACTTGTA 59.567 38.462 13.37 2.73 37.27 2.41
3184 3455 6.255596 TGTGAAGTGAGCTAGTACTTGTAG 57.744 41.667 13.37 0.00 37.27 2.74
3185 3456 6.002082 TGTGAAGTGAGCTAGTACTTGTAGA 58.998 40.000 13.37 1.77 37.27 2.59
3186 3457 6.149640 TGTGAAGTGAGCTAGTACTTGTAGAG 59.850 42.308 13.37 0.00 37.27 2.43
3198 3469 6.448006 AGTACTTGTAGAGTTGTAGTTGCAG 58.552 40.000 0.00 0.00 39.86 4.41
3228 3499 6.302535 TGGGAGAAAGAAATGATTACCGTA 57.697 37.500 0.00 0.00 0.00 4.02
3229 3500 6.346096 TGGGAGAAAGAAATGATTACCGTAG 58.654 40.000 0.00 0.00 0.00 3.51
3230 3501 5.236695 GGGAGAAAGAAATGATTACCGTAGC 59.763 44.000 0.00 0.00 0.00 3.58
3231 3502 5.815740 GGAGAAAGAAATGATTACCGTAGCA 59.184 40.000 0.00 0.00 0.00 3.49
3232 3503 6.238130 GGAGAAAGAAATGATTACCGTAGCAC 60.238 42.308 0.00 0.00 0.00 4.40
3249 3520 2.115266 CAGCACGGGGGAAAAGGT 59.885 61.111 0.00 0.00 0.00 3.50
3251 3522 0.676782 CAGCACGGGGGAAAAGGTAG 60.677 60.000 0.00 0.00 0.00 3.18
3254 3525 0.034477 CACGGGGGAAAAGGTAGCAT 60.034 55.000 0.00 0.00 0.00 3.79
3256 3527 0.751643 CGGGGGAAAAGGTAGCATGG 60.752 60.000 0.00 0.00 0.00 3.66
3264 3535 2.910688 AAGGTAGCATGGATGTACCG 57.089 50.000 0.00 0.00 42.61 4.02
3266 3537 0.756903 GGTAGCATGGATGTACCGGT 59.243 55.000 13.98 13.98 42.61 5.28
3267 3538 1.965643 GGTAGCATGGATGTACCGGTA 59.034 52.381 11.16 11.16 42.61 4.02
3268 3539 2.288640 GGTAGCATGGATGTACCGGTAC 60.289 54.545 33.42 33.42 42.61 3.34
3269 3540 1.789523 AGCATGGATGTACCGGTACT 58.210 50.000 37.37 25.76 42.61 2.73
3270 3541 2.953453 AGCATGGATGTACCGGTACTA 58.047 47.619 37.37 26.39 42.61 1.82
3276 3547 0.666913 ATGTACCGGTACTAGCTGCG 59.333 55.000 37.37 0.00 37.00 5.18
3279 3550 1.431488 TACCGGTACTAGCTGCGTCG 61.431 60.000 11.16 0.00 0.00 5.12
3282 3553 1.872679 GGTACTAGCTGCGTCGCAC 60.873 63.158 17.58 13.33 33.79 5.34
3302 3573 3.865745 CACGATCAATGTACTCAAGGACC 59.134 47.826 0.00 0.00 0.00 4.46
3303 3574 3.513912 ACGATCAATGTACTCAAGGACCA 59.486 43.478 0.00 0.00 0.00 4.02
3308 3579 5.245531 TCAATGTACTCAAGGACCAATGTC 58.754 41.667 0.00 0.00 40.98 3.06
3364 3635 8.721478 AGTGCTGTAGTATTTACACAAGAAATG 58.279 33.333 0.00 0.00 0.00 2.32
3376 3647 8.684386 TTACACAAGAAATGACTACAATTCCA 57.316 30.769 0.00 0.00 36.81 3.53
3386 3657 6.435430 TGACTACAATTCCATACATTGCAC 57.565 37.500 0.00 0.00 35.36 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.969117 TGAGTTGCTCATGTGTTGTTC 57.031 42.857 0.00 0.00 35.39 3.18
2 3 3.544684 TCTTGAGTTGCTCATGTGTTGT 58.455 40.909 10.44 0.00 40.39 3.32
3 4 4.556942 TTCTTGAGTTGCTCATGTGTTG 57.443 40.909 10.44 0.00 40.39 3.33
4 5 4.883585 TCTTTCTTGAGTTGCTCATGTGTT 59.116 37.500 10.44 0.00 40.39 3.32
6 7 5.624344 ATCTTTCTTGAGTTGCTCATGTG 57.376 39.130 10.44 0.00 40.39 3.21
8 9 6.675026 TCAAATCTTTCTTGAGTTGCTCATG 58.325 36.000 0.00 3.07 40.39 3.07
9 10 6.889301 TCAAATCTTTCTTGAGTTGCTCAT 57.111 33.333 0.00 0.00 40.39 2.90
10 11 6.889301 ATCAAATCTTTCTTGAGTTGCTCA 57.111 33.333 0.00 0.00 40.49 4.26
11 12 7.365741 TCAATCAAATCTTTCTTGAGTTGCTC 58.634 34.615 0.00 0.00 40.49 4.26
12 13 7.281040 TCAATCAAATCTTTCTTGAGTTGCT 57.719 32.000 0.00 0.00 40.49 3.91
13 14 6.089150 GCTCAATCAAATCTTTCTTGAGTTGC 59.911 38.462 17.38 7.92 42.92 4.17
14 15 7.114529 GTGCTCAATCAAATCTTTCTTGAGTTG 59.885 37.037 17.38 5.44 42.92 3.16
15 16 7.144000 GTGCTCAATCAAATCTTTCTTGAGTT 58.856 34.615 17.38 0.00 42.92 3.01
16 17 6.294397 GGTGCTCAATCAAATCTTTCTTGAGT 60.294 38.462 17.38 0.35 42.92 3.41
17 18 6.072064 AGGTGCTCAATCAAATCTTTCTTGAG 60.072 38.462 14.46 14.46 43.51 3.02
18 19 5.771666 AGGTGCTCAATCAAATCTTTCTTGA 59.228 36.000 0.00 0.00 37.22 3.02
19 20 5.862323 CAGGTGCTCAATCAAATCTTTCTTG 59.138 40.000 0.00 0.00 0.00 3.02
20 21 5.566230 GCAGGTGCTCAATCAAATCTTTCTT 60.566 40.000 0.00 0.00 38.21 2.52
21 22 4.082354 GCAGGTGCTCAATCAAATCTTTCT 60.082 41.667 0.00 0.00 38.21 2.52
22 23 4.171754 GCAGGTGCTCAATCAAATCTTTC 58.828 43.478 0.00 0.00 38.21 2.62
23 24 3.366679 CGCAGGTGCTCAATCAAATCTTT 60.367 43.478 0.00 0.00 39.32 2.52
24 25 2.163010 CGCAGGTGCTCAATCAAATCTT 59.837 45.455 0.00 0.00 39.32 2.40
25 26 1.741706 CGCAGGTGCTCAATCAAATCT 59.258 47.619 0.00 0.00 39.32 2.40
26 27 2.184385 CGCAGGTGCTCAATCAAATC 57.816 50.000 0.00 0.00 39.32 2.17
41 42 2.106683 CCTCTTTAACCGCCCGCAG 61.107 63.158 0.00 0.00 0.00 5.18
42 43 1.906105 ATCCTCTTTAACCGCCCGCA 61.906 55.000 0.00 0.00 0.00 5.69
43 44 0.105408 TATCCTCTTTAACCGCCCGC 59.895 55.000 0.00 0.00 0.00 6.13
44 45 2.159000 AGTTATCCTCTTTAACCGCCCG 60.159 50.000 0.00 0.00 31.31 6.13
45 46 3.555527 AGTTATCCTCTTTAACCGCCC 57.444 47.619 0.00 0.00 31.31 6.13
46 47 6.990341 TTTTAGTTATCCTCTTTAACCGCC 57.010 37.500 0.00 0.00 31.31 6.13
47 48 7.809665 TGTTTTTAGTTATCCTCTTTAACCGC 58.190 34.615 0.00 0.00 31.31 5.68
54 55 9.686683 AGCACATATGTTTTTAGTTATCCTCTT 57.313 29.630 5.37 0.00 0.00 2.85
148 149 9.929722 GCTCAAAATAACACATATCAAATCGTA 57.070 29.630 0.00 0.00 0.00 3.43
149 150 8.677300 AGCTCAAAATAACACATATCAAATCGT 58.323 29.630 0.00 0.00 0.00 3.73
150 151 9.507280 AAGCTCAAAATAACACATATCAAATCG 57.493 29.630 0.00 0.00 0.00 3.34
153 154 9.409312 CACAAGCTCAAAATAACACATATCAAA 57.591 29.630 0.00 0.00 0.00 2.69
154 155 8.791675 TCACAAGCTCAAAATAACACATATCAA 58.208 29.630 0.00 0.00 0.00 2.57
155 156 8.334263 TCACAAGCTCAAAATAACACATATCA 57.666 30.769 0.00 0.00 0.00 2.15
156 157 9.065871 GTTCACAAGCTCAAAATAACACATATC 57.934 33.333 0.00 0.00 0.00 1.63
157 158 8.796475 AGTTCACAAGCTCAAAATAACACATAT 58.204 29.630 0.00 0.00 0.00 1.78
158 159 8.165239 AGTTCACAAGCTCAAAATAACACATA 57.835 30.769 0.00 0.00 0.00 2.29
159 160 7.042797 AGTTCACAAGCTCAAAATAACACAT 57.957 32.000 0.00 0.00 0.00 3.21
160 161 6.449635 AGTTCACAAGCTCAAAATAACACA 57.550 33.333 0.00 0.00 0.00 3.72
161 162 7.755582 AAAGTTCACAAGCTCAAAATAACAC 57.244 32.000 0.00 0.00 0.00 3.32
162 163 9.862371 TTTAAAGTTCACAAGCTCAAAATAACA 57.138 25.926 0.00 0.00 0.00 2.41
190 191 7.380065 TCGTCATTTAAAACTAGCGCAATTTTT 59.620 29.630 11.47 13.57 0.00 1.94
191 192 6.858993 TCGTCATTTAAAACTAGCGCAATTTT 59.141 30.769 11.47 15.09 0.00 1.82
192 193 6.375377 TCGTCATTTAAAACTAGCGCAATTT 58.625 32.000 11.47 7.55 0.00 1.82
193 194 5.933790 TCGTCATTTAAAACTAGCGCAATT 58.066 33.333 11.47 0.00 0.00 2.32
194 195 5.350365 TCTCGTCATTTAAAACTAGCGCAAT 59.650 36.000 11.47 0.00 0.00 3.56
195 196 4.687018 TCTCGTCATTTAAAACTAGCGCAA 59.313 37.500 11.47 0.00 0.00 4.85
196 197 4.090930 GTCTCGTCATTTAAAACTAGCGCA 59.909 41.667 11.47 0.00 0.00 6.09
197 198 4.492085 GGTCTCGTCATTTAAAACTAGCGC 60.492 45.833 0.00 0.00 0.00 5.92
198 199 4.863131 AGGTCTCGTCATTTAAAACTAGCG 59.137 41.667 0.00 0.00 0.00 4.26
199 200 5.446073 GCAGGTCTCGTCATTTAAAACTAGC 60.446 44.000 0.00 0.00 0.00 3.42
200 201 5.869888 AGCAGGTCTCGTCATTTAAAACTAG 59.130 40.000 0.00 0.00 0.00 2.57
201 202 5.790593 AGCAGGTCTCGTCATTTAAAACTA 58.209 37.500 0.00 0.00 0.00 2.24
202 203 4.642429 AGCAGGTCTCGTCATTTAAAACT 58.358 39.130 0.00 0.00 0.00 2.66
203 204 6.508088 CGATAGCAGGTCTCGTCATTTAAAAC 60.508 42.308 0.00 0.00 0.00 2.43
204 205 5.518847 CGATAGCAGGTCTCGTCATTTAAAA 59.481 40.000 0.00 0.00 0.00 1.52
205 206 5.041287 CGATAGCAGGTCTCGTCATTTAAA 58.959 41.667 0.00 0.00 0.00 1.52
206 207 4.097437 ACGATAGCAGGTCTCGTCATTTAA 59.903 41.667 7.19 0.00 41.42 1.52
207 208 3.630769 ACGATAGCAGGTCTCGTCATTTA 59.369 43.478 7.19 0.00 41.42 1.40
208 209 2.427453 ACGATAGCAGGTCTCGTCATTT 59.573 45.455 7.19 0.00 41.42 2.32
209 210 2.025155 ACGATAGCAGGTCTCGTCATT 58.975 47.619 7.19 0.00 41.42 2.57
210 211 1.681538 ACGATAGCAGGTCTCGTCAT 58.318 50.000 7.19 0.00 41.42 3.06
211 212 2.320745 TACGATAGCAGGTCTCGTCA 57.679 50.000 15.45 1.99 43.88 4.35
212 213 2.806818 TGATACGATAGCAGGTCTCGTC 59.193 50.000 15.45 4.65 43.88 4.20
213 214 2.809119 CTGATACGATAGCAGGTCTCGT 59.191 50.000 16.14 16.14 46.38 4.18
214 215 2.809119 ACTGATACGATAGCAGGTCTCG 59.191 50.000 5.90 5.90 45.96 4.04
215 216 3.566322 ACACTGATACGATAGCAGGTCTC 59.434 47.826 12.59 0.00 45.96 3.36
216 217 3.556999 ACACTGATACGATAGCAGGTCT 58.443 45.455 12.59 0.00 45.96 3.85
217 218 3.304794 GGACACTGATACGATAGCAGGTC 60.305 52.174 12.59 14.06 45.96 3.85
218 219 2.623889 GGACACTGATACGATAGCAGGT 59.376 50.000 12.59 8.60 45.96 4.00
219 220 2.350868 CGGACACTGATACGATAGCAGG 60.351 54.545 12.59 6.36 45.96 4.85
220 221 2.290916 ACGGACACTGATACGATAGCAG 59.709 50.000 8.19 8.19 47.00 4.24
221 222 2.032924 CACGGACACTGATACGATAGCA 59.967 50.000 0.00 0.00 42.67 3.49
222 223 2.604855 CCACGGACACTGATACGATAGC 60.605 54.545 0.00 0.00 42.67 2.97
223 224 2.876550 TCCACGGACACTGATACGATAG 59.123 50.000 0.00 0.00 46.19 2.08
224 225 2.921821 TCCACGGACACTGATACGATA 58.078 47.619 0.00 0.00 0.00 2.92
225 226 1.758936 TCCACGGACACTGATACGAT 58.241 50.000 0.00 0.00 0.00 3.73
226 227 1.758936 ATCCACGGACACTGATACGA 58.241 50.000 0.00 0.00 0.00 3.43
227 228 2.159296 TCAATCCACGGACACTGATACG 60.159 50.000 0.00 0.00 0.00 3.06
228 229 3.520290 TCAATCCACGGACACTGATAC 57.480 47.619 0.00 0.00 0.00 2.24
229 230 4.441792 CAATCAATCCACGGACACTGATA 58.558 43.478 7.30 0.00 0.00 2.15
230 231 3.273434 CAATCAATCCACGGACACTGAT 58.727 45.455 0.00 0.00 0.00 2.90
231 232 2.698803 CAATCAATCCACGGACACTGA 58.301 47.619 0.00 0.00 0.00 3.41
232 233 1.131126 GCAATCAATCCACGGACACTG 59.869 52.381 0.00 0.00 0.00 3.66
233 234 1.271325 TGCAATCAATCCACGGACACT 60.271 47.619 0.00 0.00 0.00 3.55
234 235 1.135689 GTGCAATCAATCCACGGACAC 60.136 52.381 0.00 0.00 0.00 3.67
235 236 1.164411 GTGCAATCAATCCACGGACA 58.836 50.000 0.00 0.00 0.00 4.02
236 237 0.096976 CGTGCAATCAATCCACGGAC 59.903 55.000 4.65 0.00 46.03 4.79
237 238 2.465774 CGTGCAATCAATCCACGGA 58.534 52.632 4.65 0.00 46.03 4.69
240 241 0.096976 CGTCCGTGCAATCAATCCAC 59.903 55.000 0.00 0.00 0.00 4.02
241 242 0.036858 TCGTCCGTGCAATCAATCCA 60.037 50.000 0.00 0.00 0.00 3.41
242 243 1.083489 TTCGTCCGTGCAATCAATCC 58.917 50.000 0.00 0.00 0.00 3.01
243 244 4.457810 CATATTCGTCCGTGCAATCAATC 58.542 43.478 0.00 0.00 0.00 2.67
244 245 3.250762 CCATATTCGTCCGTGCAATCAAT 59.749 43.478 0.00 0.00 0.00 2.57
245 246 2.611751 CCATATTCGTCCGTGCAATCAA 59.388 45.455 0.00 0.00 0.00 2.57
246 247 2.209273 CCATATTCGTCCGTGCAATCA 58.791 47.619 0.00 0.00 0.00 2.57
247 248 2.032894 CACCATATTCGTCCGTGCAATC 60.033 50.000 0.00 0.00 0.00 2.67
248 249 1.939934 CACCATATTCGTCCGTGCAAT 59.060 47.619 0.00 0.00 0.00 3.56
249 250 1.338294 ACACCATATTCGTCCGTGCAA 60.338 47.619 0.00 0.00 0.00 4.08
250 251 0.248012 ACACCATATTCGTCCGTGCA 59.752 50.000 0.00 0.00 0.00 4.57
251 252 0.928229 GACACCATATTCGTCCGTGC 59.072 55.000 0.00 0.00 0.00 5.34
252 253 1.567504 GGACACCATATTCGTCCGTG 58.432 55.000 0.00 0.00 39.86 4.94
255 256 0.462789 ACCGGACACCATATTCGTCC 59.537 55.000 9.46 0.00 44.79 4.79
256 257 2.304751 AACCGGACACCATATTCGTC 57.695 50.000 9.46 0.00 0.00 4.20
257 258 2.773993 AAACCGGACACCATATTCGT 57.226 45.000 9.46 0.00 0.00 3.85
258 259 3.554324 CACTAAACCGGACACCATATTCG 59.446 47.826 9.46 0.00 0.00 3.34
259 260 4.510571 ACACTAAACCGGACACCATATTC 58.489 43.478 9.46 0.00 0.00 1.75
260 261 4.020039 TGACACTAAACCGGACACCATATT 60.020 41.667 9.46 0.00 0.00 1.28
261 262 3.516300 TGACACTAAACCGGACACCATAT 59.484 43.478 9.46 0.00 0.00 1.78
262 263 2.898612 TGACACTAAACCGGACACCATA 59.101 45.455 9.46 0.00 0.00 2.74
263 264 1.695242 TGACACTAAACCGGACACCAT 59.305 47.619 9.46 0.00 0.00 3.55
264 265 1.121378 TGACACTAAACCGGACACCA 58.879 50.000 9.46 0.00 0.00 4.17
265 266 2.073816 CATGACACTAAACCGGACACC 58.926 52.381 9.46 0.00 0.00 4.16
266 267 3.034721 TCATGACACTAAACCGGACAC 57.965 47.619 9.46 0.00 0.00 3.67
267 268 3.322541 TCTTCATGACACTAAACCGGACA 59.677 43.478 9.46 0.00 0.00 4.02
268 269 3.921677 TCTTCATGACACTAAACCGGAC 58.078 45.455 9.46 0.00 0.00 4.79
269 270 4.610605 TTCTTCATGACACTAAACCGGA 57.389 40.909 9.46 0.00 0.00 5.14
270 271 5.411361 TCAATTCTTCATGACACTAAACCGG 59.589 40.000 0.00 0.00 0.00 5.28
271 272 6.480524 TCAATTCTTCATGACACTAAACCG 57.519 37.500 0.00 0.00 0.00 4.44
272 273 8.099364 TCTTCAATTCTTCATGACACTAAACC 57.901 34.615 0.00 0.00 0.00 3.27
273 274 9.552114 CATCTTCAATTCTTCATGACACTAAAC 57.448 33.333 0.00 0.00 0.00 2.01
274 275 8.239314 GCATCTTCAATTCTTCATGACACTAAA 58.761 33.333 0.00 0.00 0.00 1.85
275 276 7.609146 AGCATCTTCAATTCTTCATGACACTAA 59.391 33.333 0.00 0.00 0.00 2.24
276 277 7.108194 AGCATCTTCAATTCTTCATGACACTA 58.892 34.615 0.00 0.00 0.00 2.74
277 278 5.944599 AGCATCTTCAATTCTTCATGACACT 59.055 36.000 0.00 0.00 0.00 3.55
278 279 6.192234 AGCATCTTCAATTCTTCATGACAC 57.808 37.500 0.00 0.00 0.00 3.67
279 280 7.771826 TCATAGCATCTTCAATTCTTCATGACA 59.228 33.333 0.00 0.00 0.00 3.58
280 281 8.151141 TCATAGCATCTTCAATTCTTCATGAC 57.849 34.615 0.00 0.00 0.00 3.06
281 282 8.208903 TCTCATAGCATCTTCAATTCTTCATGA 58.791 33.333 0.00 0.00 0.00 3.07
282 283 8.379457 TCTCATAGCATCTTCAATTCTTCATG 57.621 34.615 0.00 0.00 0.00 3.07
283 284 8.975663 TTCTCATAGCATCTTCAATTCTTCAT 57.024 30.769 0.00 0.00 0.00 2.57
284 285 8.975663 ATTCTCATAGCATCTTCAATTCTTCA 57.024 30.769 0.00 0.00 0.00 3.02
285 286 8.222433 CGATTCTCATAGCATCTTCAATTCTTC 58.778 37.037 0.00 0.00 0.00 2.87
286 287 7.930325 TCGATTCTCATAGCATCTTCAATTCTT 59.070 33.333 0.00 0.00 0.00 2.52
287 288 7.440198 TCGATTCTCATAGCATCTTCAATTCT 58.560 34.615 0.00 0.00 0.00 2.40
288 289 7.649370 TCGATTCTCATAGCATCTTCAATTC 57.351 36.000 0.00 0.00 0.00 2.17
289 290 7.876582 TCATCGATTCTCATAGCATCTTCAATT 59.123 33.333 0.00 0.00 0.00 2.32
290 291 7.384477 TCATCGATTCTCATAGCATCTTCAAT 58.616 34.615 0.00 0.00 0.00 2.57
291 292 6.752168 TCATCGATTCTCATAGCATCTTCAA 58.248 36.000 0.00 0.00 0.00 2.69
292 293 6.208204 TCTCATCGATTCTCATAGCATCTTCA 59.792 38.462 0.00 0.00 0.00 3.02
293 294 6.619744 TCTCATCGATTCTCATAGCATCTTC 58.380 40.000 0.00 0.00 0.00 2.87
294 295 6.587206 TCTCATCGATTCTCATAGCATCTT 57.413 37.500 0.00 0.00 0.00 2.40
295 296 6.587206 TTCTCATCGATTCTCATAGCATCT 57.413 37.500 0.00 0.00 0.00 2.90
296 297 7.359933 GGTTTTCTCATCGATTCTCATAGCATC 60.360 40.741 0.00 0.00 0.00 3.91
297 298 6.426328 GGTTTTCTCATCGATTCTCATAGCAT 59.574 38.462 0.00 0.00 0.00 3.79
298 299 5.755375 GGTTTTCTCATCGATTCTCATAGCA 59.245 40.000 0.00 0.00 0.00 3.49
299 300 5.755375 TGGTTTTCTCATCGATTCTCATAGC 59.245 40.000 0.00 0.00 0.00 2.97
300 301 7.776933 TTGGTTTTCTCATCGATTCTCATAG 57.223 36.000 0.00 0.00 0.00 2.23
301 302 7.986889 TCATTGGTTTTCTCATCGATTCTCATA 59.013 33.333 0.00 0.00 0.00 2.15
302 303 6.825213 TCATTGGTTTTCTCATCGATTCTCAT 59.175 34.615 0.00 0.00 0.00 2.90
303 304 6.092670 GTCATTGGTTTTCTCATCGATTCTCA 59.907 38.462 0.00 0.00 0.00 3.27
304 305 6.314896 AGTCATTGGTTTTCTCATCGATTCTC 59.685 38.462 0.00 0.00 0.00 2.87
305 306 6.093219 CAGTCATTGGTTTTCTCATCGATTCT 59.907 38.462 0.00 0.00 0.00 2.40
306 307 6.092670 TCAGTCATTGGTTTTCTCATCGATTC 59.907 38.462 0.00 0.00 0.00 2.52
307 308 5.939883 TCAGTCATTGGTTTTCTCATCGATT 59.060 36.000 0.00 0.00 0.00 3.34
308 309 5.491070 TCAGTCATTGGTTTTCTCATCGAT 58.509 37.500 0.00 0.00 0.00 3.59
309 310 4.893608 TCAGTCATTGGTTTTCTCATCGA 58.106 39.130 0.00 0.00 0.00 3.59
310 311 4.436584 GCTCAGTCATTGGTTTTCTCATCG 60.437 45.833 0.00 0.00 0.00 3.84
311 312 4.456911 TGCTCAGTCATTGGTTTTCTCATC 59.543 41.667 0.00 0.00 0.00 2.92
312 313 4.217118 GTGCTCAGTCATTGGTTTTCTCAT 59.783 41.667 0.00 0.00 0.00 2.90
313 314 3.565482 GTGCTCAGTCATTGGTTTTCTCA 59.435 43.478 0.00 0.00 0.00 3.27
314 315 3.364366 CGTGCTCAGTCATTGGTTTTCTC 60.364 47.826 0.00 0.00 0.00 2.87
315 316 2.549754 CGTGCTCAGTCATTGGTTTTCT 59.450 45.455 0.00 0.00 0.00 2.52
316 317 2.290641 ACGTGCTCAGTCATTGGTTTTC 59.709 45.455 0.00 0.00 0.00 2.29
317 318 2.033299 CACGTGCTCAGTCATTGGTTTT 59.967 45.455 0.82 0.00 0.00 2.43
318 319 1.603802 CACGTGCTCAGTCATTGGTTT 59.396 47.619 0.82 0.00 0.00 3.27
319 320 1.229428 CACGTGCTCAGTCATTGGTT 58.771 50.000 0.82 0.00 0.00 3.67
320 321 1.230635 GCACGTGCTCAGTCATTGGT 61.231 55.000 32.55 0.00 38.21 3.67
321 322 1.499056 GCACGTGCTCAGTCATTGG 59.501 57.895 32.55 0.00 38.21 3.16
322 323 1.131218 CGCACGTGCTCAGTCATTG 59.869 57.895 35.27 14.82 39.32 2.82
323 324 2.671177 GCGCACGTGCTCAGTCATT 61.671 57.895 35.27 0.00 39.32 2.57
324 325 3.114616 GCGCACGTGCTCAGTCAT 61.115 61.111 35.27 0.00 39.32 3.06
325 326 4.583866 TGCGCACGTGCTCAGTCA 62.584 61.111 35.27 21.60 39.32 3.41
326 327 4.064491 GTGCGCACGTGCTCAGTC 62.064 66.667 35.27 20.34 36.34 3.51
341 342 0.039527 GGTAAAAGCAAGCACGGGTG 60.040 55.000 0.00 0.00 0.00 4.61
342 343 1.512156 CGGTAAAAGCAAGCACGGGT 61.512 55.000 0.00 0.00 0.00 5.28
343 344 1.209127 CGGTAAAAGCAAGCACGGG 59.791 57.895 0.00 0.00 0.00 5.28
344 345 1.209127 CCGGTAAAAGCAAGCACGG 59.791 57.895 0.00 0.00 0.00 4.94
345 346 0.385473 CACCGGTAAAAGCAAGCACG 60.385 55.000 6.87 0.00 0.00 5.34
346 347 0.663269 GCACCGGTAAAAGCAAGCAC 60.663 55.000 6.87 0.00 0.00 4.40
347 348 1.103987 TGCACCGGTAAAAGCAAGCA 61.104 50.000 14.38 11.07 33.48 3.91
348 349 0.031449 TTGCACCGGTAAAAGCAAGC 59.969 50.000 22.15 13.18 41.55 4.01
350 351 1.394618 ACTTGCACCGGTAAAAGCAA 58.605 45.000 23.78 23.78 43.90 3.91
351 352 1.066303 CAACTTGCACCGGTAAAAGCA 59.934 47.619 22.24 18.22 34.79 3.91
352 353 1.766069 CAACTTGCACCGGTAAAAGC 58.234 50.000 22.24 16.04 0.00 3.51
353 354 1.766069 GCAACTTGCACCGGTAAAAG 58.234 50.000 21.20 21.20 44.26 2.27
354 355 3.949031 GCAACTTGCACCGGTAAAA 57.051 47.368 6.87 3.51 44.26 1.52
364 365 4.035675 GGGACTCTGTATATTGCAACTTGC 59.964 45.833 0.00 6.82 45.29 4.01
365 366 5.431765 AGGGACTCTGTATATTGCAACTTG 58.568 41.667 0.00 0.00 0.00 3.16
366 367 5.700402 AGGGACTCTGTATATTGCAACTT 57.300 39.130 0.00 0.00 0.00 2.66
367 368 5.396884 GGAAGGGACTCTGTATATTGCAACT 60.397 44.000 0.00 0.00 38.49 3.16
368 369 4.816925 GGAAGGGACTCTGTATATTGCAAC 59.183 45.833 0.00 0.00 38.49 4.17
369 370 4.473196 TGGAAGGGACTCTGTATATTGCAA 59.527 41.667 0.00 0.00 38.49 4.08
370 371 4.037222 TGGAAGGGACTCTGTATATTGCA 58.963 43.478 0.00 0.00 38.49 4.08
371 372 4.689612 TGGAAGGGACTCTGTATATTGC 57.310 45.455 0.00 0.00 38.49 3.56
372 373 7.938140 TTTTTGGAAGGGACTCTGTATATTG 57.062 36.000 0.00 0.00 38.49 1.90
395 396 4.023193 CCTCTCGGTATGTTGCAACTTTTT 60.023 41.667 28.61 14.03 0.00 1.94
396 397 3.502211 CCTCTCGGTATGTTGCAACTTTT 59.498 43.478 28.61 16.30 0.00 2.27
397 398 3.074412 CCTCTCGGTATGTTGCAACTTT 58.926 45.455 28.61 18.61 0.00 2.66
398 399 2.301870 TCCTCTCGGTATGTTGCAACTT 59.698 45.455 28.61 24.28 0.00 2.66
399 400 1.899814 TCCTCTCGGTATGTTGCAACT 59.100 47.619 28.61 16.94 0.00 3.16
400 401 2.380084 TCCTCTCGGTATGTTGCAAC 57.620 50.000 22.83 22.83 0.00 4.17
401 402 3.071479 GTTTCCTCTCGGTATGTTGCAA 58.929 45.455 0.00 0.00 0.00 4.08
402 403 2.037902 TGTTTCCTCTCGGTATGTTGCA 59.962 45.455 0.00 0.00 0.00 4.08
403 404 2.673368 CTGTTTCCTCTCGGTATGTTGC 59.327 50.000 0.00 0.00 0.00 4.17
404 405 4.177026 CTCTGTTTCCTCTCGGTATGTTG 58.823 47.826 0.00 0.00 0.00 3.33
405 406 3.368531 GCTCTGTTTCCTCTCGGTATGTT 60.369 47.826 0.00 0.00 0.00 2.71
406 407 2.166664 GCTCTGTTTCCTCTCGGTATGT 59.833 50.000 0.00 0.00 0.00 2.29
407 408 2.428890 AGCTCTGTTTCCTCTCGGTATG 59.571 50.000 0.00 0.00 0.00 2.39
408 409 2.428890 CAGCTCTGTTTCCTCTCGGTAT 59.571 50.000 0.00 0.00 0.00 2.73
409 410 1.819288 CAGCTCTGTTTCCTCTCGGTA 59.181 52.381 0.00 0.00 0.00 4.02
410 411 0.605589 CAGCTCTGTTTCCTCTCGGT 59.394 55.000 0.00 0.00 0.00 4.69
411 412 0.891373 TCAGCTCTGTTTCCTCTCGG 59.109 55.000 0.00 0.00 0.00 4.63
412 413 1.543802 AGTCAGCTCTGTTTCCTCTCG 59.456 52.381 0.00 0.00 0.00 4.04
413 414 2.415357 CGAGTCAGCTCTGTTTCCTCTC 60.415 54.545 0.00 0.00 39.53 3.20
414 415 1.543802 CGAGTCAGCTCTGTTTCCTCT 59.456 52.381 0.00 0.00 39.53 3.69
415 416 1.989430 CGAGTCAGCTCTGTTTCCTC 58.011 55.000 0.00 0.00 39.53 3.71
416 417 0.037790 GCGAGTCAGCTCTGTTTCCT 60.038 55.000 0.00 0.00 39.53 3.36
417 418 1.016653 GGCGAGTCAGCTCTGTTTCC 61.017 60.000 6.86 0.00 39.53 3.13
418 419 0.037790 AGGCGAGTCAGCTCTGTTTC 60.038 55.000 6.86 0.00 39.53 2.78
511 516 7.042254 GGAAATAATAGTGTGGCCGTTAGTTAG 60.042 40.741 0.00 0.00 0.00 2.34
512 517 6.762661 GGAAATAATAGTGTGGCCGTTAGTTA 59.237 38.462 0.00 0.00 0.00 2.24
513 518 5.587443 GGAAATAATAGTGTGGCCGTTAGTT 59.413 40.000 0.00 0.00 0.00 2.24
514 519 5.104652 AGGAAATAATAGTGTGGCCGTTAGT 60.105 40.000 0.00 0.00 0.00 2.24
559 756 1.173913 GGTATTCGGCAGTTTGGCTT 58.826 50.000 1.13 0.00 41.25 4.35
599 796 9.398170 CAAACTTGTTGATAAAAAGACATCGAT 57.602 29.630 0.00 0.00 0.00 3.59
600 797 8.402472 ACAAACTTGTTGATAAAAAGACATCGA 58.598 29.630 0.00 0.00 38.47 3.59
601 798 8.560576 ACAAACTTGTTGATAAAAAGACATCG 57.439 30.769 0.00 0.00 38.47 3.84
646 850 1.378531 TTGTGCTCCATTATGCGTCC 58.621 50.000 0.00 0.00 0.00 4.79
680 884 4.280819 TCCTCCATTCCTAGCCATTTTTG 58.719 43.478 0.00 0.00 0.00 2.44
982 1197 2.430921 GGTGACCGACGCACTGAG 60.431 66.667 5.74 0.00 36.53 3.35
995 1210 3.695606 GGCCGAGCTCAGTGGTGA 61.696 66.667 15.40 0.00 0.00 4.02
999 1214 2.513204 CCATGGCCGAGCTCAGTG 60.513 66.667 15.40 2.36 0.00 3.66
1049 1270 4.486503 GCAGCAGGCCAGGAGGAG 62.487 72.222 5.01 0.00 36.89 3.69
1601 1822 4.309950 GGTGAGGTTGGCGACGGT 62.310 66.667 0.00 0.00 0.00 4.83
1852 2073 2.671177 CGACGCCTTCACCAGCTTG 61.671 63.158 0.00 0.00 0.00 4.01
1900 2121 4.397832 TTGTACTTCCCGCCCGCC 62.398 66.667 0.00 0.00 0.00 6.13
2266 2496 3.680490 TCCTCACAGTCACAGTAGAGAG 58.320 50.000 0.00 0.00 0.00 3.20
2286 2516 1.002624 TGCTTTCACCGGACCCATC 60.003 57.895 9.46 0.00 0.00 3.51
2287 2517 1.002134 CTGCTTTCACCGGACCCAT 60.002 57.895 9.46 0.00 0.00 4.00
2289 2519 1.376037 CTCTGCTTTCACCGGACCC 60.376 63.158 9.46 0.00 0.00 4.46
2292 2522 0.891373 CTCTCTCTGCTTTCACCGGA 59.109 55.000 9.46 0.00 0.00 5.14
2295 2525 0.739112 CCGCTCTCTCTGCTTTCACC 60.739 60.000 0.00 0.00 0.00 4.02
2367 2597 1.623311 TCAACGGCTTGAAGAGGATGA 59.377 47.619 0.00 0.00 33.20 2.92
2383 2616 5.334319 TCATGCAATCAATCAACGATCAAC 58.666 37.500 0.00 0.00 0.00 3.18
2439 2679 7.817478 AGAACGAGATGTATTGTACACATGAAA 59.183 33.333 0.00 0.00 42.23 2.69
2440 2680 7.320399 AGAACGAGATGTATTGTACACATGAA 58.680 34.615 0.00 0.00 42.23 2.57
2441 2681 6.863275 AGAACGAGATGTATTGTACACATGA 58.137 36.000 0.00 0.00 42.23 3.07
2475 2720 4.282873 GCTTTCTTCTTCTGTTGAAACCG 58.717 43.478 0.00 0.00 0.00 4.44
2482 2727 3.489229 GCAAACGGCTTTCTTCTTCTGTT 60.489 43.478 0.00 0.00 40.25 3.16
2483 2728 2.033424 GCAAACGGCTTTCTTCTTCTGT 59.967 45.455 0.00 0.00 40.25 3.41
2502 2747 4.435436 CGGTGTAGCTGCTCCGCA 62.435 66.667 27.84 6.40 38.41 5.69
2503 2748 4.129737 TCGGTGTAGCTGCTCCGC 62.130 66.667 32.10 10.04 42.95 5.54
2504 2749 2.202623 GTCGGTGTAGCTGCTCCG 60.203 66.667 31.41 31.41 44.12 4.63
2505 2750 1.446272 GTGTCGGTGTAGCTGCTCC 60.446 63.158 4.91 12.39 0.00 4.70
2513 2758 0.036765 GCAAGGGATGTGTCGGTGTA 60.037 55.000 0.00 0.00 0.00 2.90
2525 2770 2.749839 CGCGGAAATGGCAAGGGA 60.750 61.111 0.00 0.00 0.00 4.20
2661 2911 9.470399 AGGACAAAGAGGAGTAAAAACTAAAAA 57.530 29.630 0.00 0.00 0.00 1.94
2662 2912 9.470399 AAGGACAAAGAGGAGTAAAAACTAAAA 57.530 29.630 0.00 0.00 0.00 1.52
2663 2913 8.899771 CAAGGACAAAGAGGAGTAAAAACTAAA 58.100 33.333 0.00 0.00 0.00 1.85
2664 2914 7.501225 CCAAGGACAAAGAGGAGTAAAAACTAA 59.499 37.037 0.00 0.00 0.00 2.24
2665 2915 6.996282 CCAAGGACAAAGAGGAGTAAAAACTA 59.004 38.462 0.00 0.00 0.00 2.24
2666 2916 5.828328 CCAAGGACAAAGAGGAGTAAAAACT 59.172 40.000 0.00 0.00 0.00 2.66
2782 3032 3.699894 CAGGCGCACTGGACCTCT 61.700 66.667 10.83 0.00 43.70 3.69
2827 3090 2.341543 CCAGCTCATCCGGATCCG 59.658 66.667 27.65 27.65 39.44 4.18
2828 3091 2.031768 GCCAGCTCATCCGGATCC 59.968 66.667 15.88 0.00 0.00 3.36
2849 3112 3.181454 GGTGGGAATCCGTATGAACTGAT 60.181 47.826 0.00 0.00 35.24 2.90
2868 3131 7.316544 AGTAGCTCGGTAATTAAAATTGGTG 57.683 36.000 0.00 0.00 0.00 4.17
2869 3132 6.541278 GGAGTAGCTCGGTAATTAAAATTGGT 59.459 38.462 0.00 0.00 0.00 3.67
2871 3134 7.548196 TGGAGTAGCTCGGTAATTAAAATTG 57.452 36.000 0.00 0.00 0.00 2.32
2872 3135 7.827729 ACTTGGAGTAGCTCGGTAATTAAAATT 59.172 33.333 0.00 0.00 0.00 1.82
2875 3138 6.290294 ACTTGGAGTAGCTCGGTAATTAAA 57.710 37.500 0.00 0.00 0.00 1.52
2876 3139 5.927281 ACTTGGAGTAGCTCGGTAATTAA 57.073 39.130 0.00 0.00 0.00 1.40
2877 3140 5.419788 TGAACTTGGAGTAGCTCGGTAATTA 59.580 40.000 0.00 0.00 0.00 1.40
2878 3141 4.222145 TGAACTTGGAGTAGCTCGGTAATT 59.778 41.667 0.00 0.00 0.00 1.40
2879 3142 3.767673 TGAACTTGGAGTAGCTCGGTAAT 59.232 43.478 0.00 0.00 0.00 1.89
2881 3144 2.753452 CTGAACTTGGAGTAGCTCGGTA 59.247 50.000 0.00 0.00 0.00 4.02
2886 3149 1.903183 GGTCCTGAACTTGGAGTAGCT 59.097 52.381 0.00 0.00 33.78 3.32
2889 3152 2.632996 CAGTGGTCCTGAACTTGGAGTA 59.367 50.000 0.00 0.00 44.49 2.59
2891 3154 1.879796 GCAGTGGTCCTGAACTTGGAG 60.880 57.143 0.00 0.00 44.49 3.86
2892 3155 0.108585 GCAGTGGTCCTGAACTTGGA 59.891 55.000 0.00 0.00 44.49 3.53
2908 3177 7.301054 CAGTTAAGTAATTTCAGACCAAGCAG 58.699 38.462 0.00 0.00 0.00 4.24
2909 3178 6.293955 GCAGTTAAGTAATTTCAGACCAAGCA 60.294 38.462 0.00 0.00 0.00 3.91
2910 3179 6.086871 GCAGTTAAGTAATTTCAGACCAAGC 58.913 40.000 0.00 0.00 0.00 4.01
2914 3183 6.086871 GCTTGCAGTTAAGTAATTTCAGACC 58.913 40.000 0.00 0.00 0.00 3.85
2915 3184 6.668323 TGCTTGCAGTTAAGTAATTTCAGAC 58.332 36.000 0.00 0.00 0.00 3.51
2923 3194 4.079980 TGGTCTGCTTGCAGTTAAGTAA 57.920 40.909 20.20 0.00 0.00 2.24
2926 3197 3.988379 TTTGGTCTGCTTGCAGTTAAG 57.012 42.857 20.20 0.00 0.00 1.85
2932 3203 6.991938 AGTTTATTATTTTGGTCTGCTTGCA 58.008 32.000 0.00 0.00 0.00 4.08
2938 3209 8.946085 TGCTACAGAGTTTATTATTTTGGTCTG 58.054 33.333 0.00 0.00 36.95 3.51
2948 3219 9.727859 TGTTATTGGTTGCTACAGAGTTTATTA 57.272 29.630 0.00 0.00 0.00 0.98
2950 3221 7.663905 TGTGTTATTGGTTGCTACAGAGTTTAT 59.336 33.333 0.00 0.00 0.00 1.40
2960 3231 5.433526 GGGAGTATGTGTTATTGGTTGCTA 58.566 41.667 0.00 0.00 0.00 3.49
2963 3234 3.064820 GCGGGAGTATGTGTTATTGGTTG 59.935 47.826 0.00 0.00 0.00 3.77
2966 3237 2.218603 GGCGGGAGTATGTGTTATTGG 58.781 52.381 0.00 0.00 0.00 3.16
2967 3238 1.864711 CGGCGGGAGTATGTGTTATTG 59.135 52.381 0.00 0.00 0.00 1.90
2969 3240 1.068127 GACGGCGGGAGTATGTGTTAT 59.932 52.381 13.24 0.00 0.00 1.89
2970 3241 0.457035 GACGGCGGGAGTATGTGTTA 59.543 55.000 13.24 0.00 0.00 2.41
2973 3244 2.106332 GGACGGCGGGAGTATGTG 59.894 66.667 13.24 0.00 0.00 3.21
2974 3245 3.152400 GGGACGGCGGGAGTATGT 61.152 66.667 13.24 0.00 0.00 2.29
2975 3246 2.246761 TTTGGGACGGCGGGAGTATG 62.247 60.000 13.24 0.00 0.00 2.39
2976 3247 1.555477 TTTTGGGACGGCGGGAGTAT 61.555 55.000 13.24 0.00 0.00 2.12
2977 3248 1.555477 ATTTTGGGACGGCGGGAGTA 61.555 55.000 13.24 0.00 0.00 2.59
2978 3249 1.555477 TATTTTGGGACGGCGGGAGT 61.555 55.000 13.24 0.00 0.00 3.85
2979 3250 0.393267 TTATTTTGGGACGGCGGGAG 60.393 55.000 13.24 0.00 0.00 4.30
2980 3251 0.677414 GTTATTTTGGGACGGCGGGA 60.677 55.000 13.24 0.00 0.00 5.14
2981 3252 0.678684 AGTTATTTTGGGACGGCGGG 60.679 55.000 13.24 0.00 0.00 6.13
2983 3254 1.129811 GACAGTTATTTTGGGACGGCG 59.870 52.381 4.80 4.80 0.00 6.46
2984 3255 2.418976 GAGACAGTTATTTTGGGACGGC 59.581 50.000 0.00 0.00 0.00 5.68
2985 3256 3.670625 TGAGACAGTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
2987 3258 4.762251 AGCTTGAGACAGTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
2988 3259 4.985538 AGCTTGAGACAGTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
2989 3260 5.712152 AAGCTTGAGACAGTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
2990 3261 7.440523 ACTAAGCTTGAGACAGTTATTTTGG 57.559 36.000 9.86 0.00 0.00 3.28
3024 3295 7.881751 TGTCTCAACTTTGTACTAGCTCTAGTA 59.118 37.037 11.59 11.59 43.98 1.82
3026 3297 7.024768 GTGTCTCAACTTTGTACTAGCTCTAG 58.975 42.308 0.00 2.55 39.04 2.43
3027 3298 6.715718 AGTGTCTCAACTTTGTACTAGCTCTA 59.284 38.462 0.00 0.00 0.00 2.43
3028 3299 5.536916 AGTGTCTCAACTTTGTACTAGCTCT 59.463 40.000 0.00 0.00 0.00 4.09
3029 3300 5.774630 AGTGTCTCAACTTTGTACTAGCTC 58.225 41.667 0.00 0.00 0.00 4.09
3030 3301 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
3031 3302 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
3038 3309 9.370126 CGTCTTAAAATAAGTGTCTCAACTTTG 57.630 33.333 0.00 0.00 40.77 2.77
3039 3310 8.557029 CCGTCTTAAAATAAGTGTCTCAACTTT 58.443 33.333 0.00 0.00 40.77 2.66
3040 3311 7.929785 TCCGTCTTAAAATAAGTGTCTCAACTT 59.070 33.333 0.00 0.00 42.89 2.66
3041 3312 7.439381 TCCGTCTTAAAATAAGTGTCTCAACT 58.561 34.615 0.00 0.00 0.00 3.16
3042 3313 7.148623 CCTCCGTCTTAAAATAAGTGTCTCAAC 60.149 40.741 0.00 0.00 0.00 3.18
3043 3314 6.872020 CCTCCGTCTTAAAATAAGTGTCTCAA 59.128 38.462 0.00 0.00 0.00 3.02
3044 3315 6.395629 CCTCCGTCTTAAAATAAGTGTCTCA 58.604 40.000 0.00 0.00 0.00 3.27
3045 3316 5.811100 CCCTCCGTCTTAAAATAAGTGTCTC 59.189 44.000 0.00 0.00 0.00 3.36
3046 3317 5.482878 TCCCTCCGTCTTAAAATAAGTGTCT 59.517 40.000 0.00 0.00 0.00 3.41
3047 3318 5.727434 TCCCTCCGTCTTAAAATAAGTGTC 58.273 41.667 0.00 0.00 0.00 3.67
3048 3319 5.247792 ACTCCCTCCGTCTTAAAATAAGTGT 59.752 40.000 0.00 0.00 0.00 3.55
3049 3320 5.731591 ACTCCCTCCGTCTTAAAATAAGTG 58.268 41.667 0.00 0.00 0.00 3.16
3050 3321 6.666980 ACTACTCCCTCCGTCTTAAAATAAGT 59.333 38.462 0.00 0.00 0.00 2.24
3051 3322 7.110043 ACTACTCCCTCCGTCTTAAAATAAG 57.890 40.000 0.00 0.00 0.00 1.73
3052 3323 7.615365 TGTACTACTCCCTCCGTCTTAAAATAA 59.385 37.037 0.00 0.00 0.00 1.40
3053 3324 7.118723 TGTACTACTCCCTCCGTCTTAAAATA 58.881 38.462 0.00 0.00 0.00 1.40
3054 3325 5.954150 TGTACTACTCCCTCCGTCTTAAAAT 59.046 40.000 0.00 0.00 0.00 1.82
3055 3326 5.324409 TGTACTACTCCCTCCGTCTTAAAA 58.676 41.667 0.00 0.00 0.00 1.52
3056 3327 4.922206 TGTACTACTCCCTCCGTCTTAAA 58.078 43.478 0.00 0.00 0.00 1.52
3057 3328 4.018960 ACTGTACTACTCCCTCCGTCTTAA 60.019 45.833 0.00 0.00 0.00 1.85
3058 3329 3.521126 ACTGTACTACTCCCTCCGTCTTA 59.479 47.826 0.00 0.00 0.00 2.10
3059 3330 2.308275 ACTGTACTACTCCCTCCGTCTT 59.692 50.000 0.00 0.00 0.00 3.01
3060 3331 1.914798 ACTGTACTACTCCCTCCGTCT 59.085 52.381 0.00 0.00 0.00 4.18
3061 3332 2.416680 ACTGTACTACTCCCTCCGTC 57.583 55.000 0.00 0.00 0.00 4.79
3062 3333 3.265479 AGTTACTGTACTACTCCCTCCGT 59.735 47.826 0.00 0.00 0.00 4.69
3063 3334 3.883669 AGTTACTGTACTACTCCCTCCG 58.116 50.000 0.00 0.00 0.00 4.63
3064 3335 6.000246 ACTAGTTACTGTACTACTCCCTCC 58.000 45.833 0.00 0.00 0.00 4.30
3065 3336 6.888105 AGACTAGTTACTGTACTACTCCCTC 58.112 44.000 0.00 0.00 0.00 4.30
3066 3337 6.889595 AGACTAGTTACTGTACTACTCCCT 57.110 41.667 0.00 0.00 0.00 4.20
3067 3338 7.108847 TGAAGACTAGTTACTGTACTACTCCC 58.891 42.308 0.00 0.00 0.00 4.30
3068 3339 7.201635 GCTGAAGACTAGTTACTGTACTACTCC 60.202 44.444 0.00 0.00 0.00 3.85
3069 3340 7.333921 TGCTGAAGACTAGTTACTGTACTACTC 59.666 40.741 0.00 0.00 0.00 2.59
3070 3341 7.166851 TGCTGAAGACTAGTTACTGTACTACT 58.833 38.462 0.00 0.00 0.00 2.57
3071 3342 7.375106 TGCTGAAGACTAGTTACTGTACTAC 57.625 40.000 0.00 0.00 0.00 2.73
3072 3343 6.598457 CCTGCTGAAGACTAGTTACTGTACTA 59.402 42.308 0.00 0.00 0.00 1.82
3073 3344 5.416326 CCTGCTGAAGACTAGTTACTGTACT 59.584 44.000 0.00 0.00 0.00 2.73
3074 3345 5.183522 ACCTGCTGAAGACTAGTTACTGTAC 59.816 44.000 0.00 0.00 0.00 2.90
3075 3346 5.322754 ACCTGCTGAAGACTAGTTACTGTA 58.677 41.667 0.00 0.00 0.00 2.74
3076 3347 4.153411 ACCTGCTGAAGACTAGTTACTGT 58.847 43.478 0.00 0.00 0.00 3.55
3077 3348 4.792521 ACCTGCTGAAGACTAGTTACTG 57.207 45.455 0.00 0.00 0.00 2.74
3078 3349 6.912951 TTTACCTGCTGAAGACTAGTTACT 57.087 37.500 0.00 0.00 0.00 2.24
3079 3350 9.303537 CTTATTTACCTGCTGAAGACTAGTTAC 57.696 37.037 0.00 0.00 0.00 2.50
3080 3351 9.251440 TCTTATTTACCTGCTGAAGACTAGTTA 57.749 33.333 0.00 0.00 0.00 2.24
3081 3352 8.135382 TCTTATTTACCTGCTGAAGACTAGTT 57.865 34.615 0.00 0.00 0.00 2.24
3082 3353 7.719871 TCTTATTTACCTGCTGAAGACTAGT 57.280 36.000 0.00 0.00 0.00 2.57
3083 3354 8.417106 TGATCTTATTTACCTGCTGAAGACTAG 58.583 37.037 0.00 0.00 0.00 2.57
3084 3355 8.306313 TGATCTTATTTACCTGCTGAAGACTA 57.694 34.615 0.00 0.00 0.00 2.59
3085 3356 7.187824 TGATCTTATTTACCTGCTGAAGACT 57.812 36.000 0.00 0.00 0.00 3.24
3086 3357 7.519649 GCATGATCTTATTTACCTGCTGAAGAC 60.520 40.741 0.00 0.00 0.00 3.01
3087 3358 6.484643 GCATGATCTTATTTACCTGCTGAAGA 59.515 38.462 0.00 0.00 0.00 2.87
3088 3359 6.293845 GGCATGATCTTATTTACCTGCTGAAG 60.294 42.308 0.00 0.00 0.00 3.02
3089 3360 5.532406 GGCATGATCTTATTTACCTGCTGAA 59.468 40.000 0.00 0.00 0.00 3.02
3090 3361 5.065914 GGCATGATCTTATTTACCTGCTGA 58.934 41.667 0.00 0.00 0.00 4.26
3091 3362 4.083643 CGGCATGATCTTATTTACCTGCTG 60.084 45.833 0.00 0.00 0.00 4.41
3092 3363 4.067896 CGGCATGATCTTATTTACCTGCT 58.932 43.478 0.00 0.00 0.00 4.24
3093 3364 3.189287 CCGGCATGATCTTATTTACCTGC 59.811 47.826 0.00 0.00 0.00 4.85
3094 3365 4.641396 TCCGGCATGATCTTATTTACCTG 58.359 43.478 0.00 0.00 0.00 4.00
3095 3366 4.804261 GCTCCGGCATGATCTTATTTACCT 60.804 45.833 0.00 0.00 38.54 3.08
3096 3367 3.437049 GCTCCGGCATGATCTTATTTACC 59.563 47.826 0.00 0.00 38.54 2.85
3107 3378 0.901827 TGAAAGTAGCTCCGGCATGA 59.098 50.000 0.00 0.00 41.70 3.07
3109 3380 2.717639 AATGAAAGTAGCTCCGGCAT 57.282 45.000 0.00 0.00 41.70 4.40
3113 3384 3.791887 CGTCTGTAATGAAAGTAGCTCCG 59.208 47.826 0.00 0.00 0.00 4.63
3125 3396 6.092122 TGTGCCTTAATTTCTCGTCTGTAATG 59.908 38.462 0.00 0.00 0.00 1.90
3128 3399 4.927425 GTGTGCCTTAATTTCTCGTCTGTA 59.073 41.667 0.00 0.00 0.00 2.74
3133 3404 3.740115 AGTGTGTGCCTTAATTTCTCGT 58.260 40.909 0.00 0.00 0.00 4.18
3136 3407 6.711277 TCATAGAGTGTGTGCCTTAATTTCT 58.289 36.000 0.00 0.00 0.00 2.52
3137 3408 6.985188 TCATAGAGTGTGTGCCTTAATTTC 57.015 37.500 0.00 0.00 0.00 2.17
3144 3415 2.833943 TCACATCATAGAGTGTGTGCCT 59.166 45.455 5.53 0.00 44.55 4.75
3149 3420 4.565962 GCTCACTTCACATCATAGAGTGTG 59.434 45.833 0.00 0.00 45.37 3.82
3150 3421 4.465660 AGCTCACTTCACATCATAGAGTGT 59.534 41.667 0.00 0.00 37.07 3.55
3157 3428 6.071108 ACAAGTACTAGCTCACTTCACATCAT 60.071 38.462 0.00 0.00 32.72 2.45
3158 3429 5.243954 ACAAGTACTAGCTCACTTCACATCA 59.756 40.000 0.00 0.00 32.72 3.07
3159 3430 5.715070 ACAAGTACTAGCTCACTTCACATC 58.285 41.667 0.00 0.00 32.72 3.06
3160 3431 5.730296 ACAAGTACTAGCTCACTTCACAT 57.270 39.130 0.00 0.00 32.72 3.21
3161 3432 6.002082 TCTACAAGTACTAGCTCACTTCACA 58.998 40.000 0.00 0.00 32.72 3.58
3162 3433 6.149807 ACTCTACAAGTACTAGCTCACTTCAC 59.850 42.308 0.00 0.00 36.07 3.18
3163 3434 6.239396 ACTCTACAAGTACTAGCTCACTTCA 58.761 40.000 0.00 0.00 36.07 3.02
3164 3435 6.746745 ACTCTACAAGTACTAGCTCACTTC 57.253 41.667 0.00 0.00 36.07 3.01
3165 3436 6.490721 ACAACTCTACAAGTACTAGCTCACTT 59.509 38.462 0.00 0.00 37.17 3.16
3166 3437 6.005198 ACAACTCTACAAGTACTAGCTCACT 58.995 40.000 0.00 0.00 37.17 3.41
3167 3438 6.256912 ACAACTCTACAAGTACTAGCTCAC 57.743 41.667 0.00 0.00 37.17 3.51
3168 3439 7.166851 ACTACAACTCTACAAGTACTAGCTCA 58.833 38.462 0.00 0.00 37.17 4.26
3169 3440 7.614124 ACTACAACTCTACAAGTACTAGCTC 57.386 40.000 0.00 0.00 37.17 4.09
3171 3442 6.527372 GCAACTACAACTCTACAAGTACTAGC 59.473 42.308 0.00 0.00 37.17 3.42
3172 3443 7.591165 TGCAACTACAACTCTACAAGTACTAG 58.409 38.462 0.00 0.00 37.17 2.57
3175 3446 6.444633 TCTGCAACTACAACTCTACAAGTAC 58.555 40.000 0.00 0.00 37.17 2.73
3176 3447 6.644248 TCTGCAACTACAACTCTACAAGTA 57.356 37.500 0.00 0.00 37.17 2.24
3177 3448 5.531122 TCTGCAACTACAACTCTACAAGT 57.469 39.130 0.00 0.00 41.10 3.16
3178 3449 5.986135 AGTTCTGCAACTACAACTCTACAAG 59.014 40.000 0.00 0.00 41.39 3.16
3179 3450 5.753438 CAGTTCTGCAACTACAACTCTACAA 59.247 40.000 0.00 0.00 41.24 2.41
3180 3451 5.289595 CAGTTCTGCAACTACAACTCTACA 58.710 41.667 0.00 0.00 41.24 2.74
3181 3452 4.150804 GCAGTTCTGCAACTACAACTCTAC 59.849 45.833 18.26 0.00 41.24 2.59
3182 3453 4.039245 AGCAGTTCTGCAACTACAACTCTA 59.961 41.667 23.69 0.00 41.24 2.43
3183 3454 3.134458 GCAGTTCTGCAACTACAACTCT 58.866 45.455 18.26 0.00 41.24 3.24
3184 3455 3.059325 CAGCAGTTCTGCAACTACAACTC 60.059 47.826 23.69 0.00 41.24 3.01
3185 3456 2.874701 CAGCAGTTCTGCAACTACAACT 59.125 45.455 23.69 0.00 41.24 3.16
3186 3457 2.031682 CCAGCAGTTCTGCAACTACAAC 60.032 50.000 23.69 0.00 41.24 3.32
3198 3469 4.074970 TCATTTCTTTCTCCCAGCAGTTC 58.925 43.478 0.00 0.00 0.00 3.01
3209 3480 6.170506 TGTGCTACGGTAATCATTTCTTTCT 58.829 36.000 0.00 0.00 0.00 2.52
3228 3499 3.429372 TTTTCCCCCGTGCTGTGCT 62.429 57.895 0.00 0.00 0.00 4.40
3229 3500 2.909965 TTTTCCCCCGTGCTGTGC 60.910 61.111 0.00 0.00 0.00 4.57
3230 3501 2.268076 CCTTTTCCCCCGTGCTGTG 61.268 63.158 0.00 0.00 0.00 3.66
3231 3502 1.420532 TACCTTTTCCCCCGTGCTGT 61.421 55.000 0.00 0.00 0.00 4.40
3232 3503 0.676782 CTACCTTTTCCCCCGTGCTG 60.677 60.000 0.00 0.00 0.00 4.41
3249 3520 2.953453 AGTACCGGTACATCCATGCTA 58.047 47.619 38.79 4.22 38.48 3.49
3251 3522 2.609737 GCTAGTACCGGTACATCCATGC 60.610 54.545 38.79 27.81 38.48 4.06
3254 3525 2.304092 CAGCTAGTACCGGTACATCCA 58.696 52.381 38.79 22.65 38.48 3.41
3256 3527 1.334779 CGCAGCTAGTACCGGTACATC 60.335 57.143 38.79 27.52 38.48 3.06
3264 3535 1.872679 GTGCGACGCAGCTAGTACC 60.873 63.158 25.21 4.76 40.08 3.34
3266 3537 1.712018 ATCGTGCGACGCAGCTAGTA 61.712 55.000 25.21 5.48 42.21 1.82
3267 3538 2.921538 GATCGTGCGACGCAGCTAGT 62.922 60.000 25.21 7.82 42.21 2.57
3268 3539 2.278206 ATCGTGCGACGCAGCTAG 60.278 61.111 25.21 14.83 42.21 3.42
3269 3540 2.277949 GATCGTGCGACGCAGCTA 60.278 61.111 25.21 12.02 42.21 3.32
3270 3541 3.914605 TTGATCGTGCGACGCAGCT 62.915 57.895 25.21 10.75 42.21 4.24
3276 3547 2.526077 TGAGTACATTGATCGTGCGAC 58.474 47.619 0.00 0.00 0.00 5.19
3279 3550 3.307242 GTCCTTGAGTACATTGATCGTGC 59.693 47.826 0.00 0.00 0.00 5.34
3282 3553 4.123497 TGGTCCTTGAGTACATTGATCG 57.877 45.455 0.00 0.00 0.00 3.69
3302 3573 4.651867 CAGGAGCTGGGGACATTG 57.348 61.111 0.00 0.00 41.51 2.82
3330 3601 5.613358 AAATACTACAGCACTTCAGCAAC 57.387 39.130 0.00 0.00 36.85 4.17
3336 3607 7.884816 TCTTGTGTAAATACTACAGCACTTC 57.115 36.000 0.00 0.00 0.00 3.01
3364 3635 5.590259 AGGTGCAATGTATGGAATTGTAGTC 59.410 40.000 0.00 0.00 37.35 2.59
3386 3657 2.225019 GTGATCACAGCTTCACACAAGG 59.775 50.000 21.07 0.00 41.48 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.