Multiple sequence alignment - TraesCS4B01G316900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G316900 chr4B 100.000 3109 0 0 1 3109 606763708 606766816 0.000000e+00 5742.0
1 TraesCS4B01G316900 chr4B 100.000 179 0 0 3433 3611 606767140 606767318 7.470000e-87 331.0
2 TraesCS4B01G316900 chr4B 87.912 182 17 5 3434 3611 59574462 59574642 3.650000e-50 209.0
3 TraesCS4B01G316900 chr4D 96.362 2144 57 8 911 3040 479540561 479542697 0.000000e+00 3507.0
4 TraesCS4B01G316900 chr4D 88.450 329 21 5 1 327 479540037 479540350 7.320000e-102 381.0
5 TraesCS4B01G316900 chr4D 90.395 177 10 3 783 959 479540397 479540566 3.630000e-55 226.0
6 TraesCS4B01G316900 chr4D 90.476 168 14 1 3443 3608 479542970 479543137 1.690000e-53 220.0
7 TraesCS4B01G316900 chr4D 95.588 68 3 0 3041 3108 479542794 479542861 3.810000e-20 110.0
8 TraesCS4B01G316900 chr4A 95.523 1854 68 5 811 2656 685834609 685836455 0.000000e+00 2950.0
9 TraesCS4B01G316900 chr4A 85.133 1547 207 18 1015 2551 632989706 632991239 0.000000e+00 1561.0
10 TraesCS4B01G316900 chr4A 85.123 1546 207 18 1015 2550 632999852 632998320 0.000000e+00 1559.0
11 TraesCS4B01G316900 chr4A 89.143 175 16 2 3440 3611 22716369 22716195 7.850000e-52 215.0
12 TraesCS4B01G316900 chr4A 90.769 65 4 1 3045 3109 615555464 615555402 6.420000e-13 86.1
13 TraesCS4B01G316900 chr5D 84.298 1573 222 20 1015 2575 537162874 537161315 0.000000e+00 1513.0
14 TraesCS4B01G316900 chr5D 84.456 1544 223 14 1015 2551 537088077 537089610 0.000000e+00 1506.0
15 TraesCS4B01G316900 chr5D 80.528 1592 262 38 997 2555 512534342 512535918 0.000000e+00 1179.0
16 TraesCS4B01G316900 chr5D 90.751 173 13 2 3442 3611 487521961 487521789 1.010000e-55 228.0
17 TraesCS4B01G316900 chr5D 91.304 69 6 0 3041 3109 487522143 487522075 1.070000e-15 95.3
18 TraesCS4B01G316900 chr5B 84.377 1549 218 19 1015 2551 677537454 677538990 0.000000e+00 1498.0
19 TraesCS4B01G316900 chr5B 84.173 1548 221 19 1015 2550 677545043 677543508 0.000000e+00 1480.0
20 TraesCS4B01G316900 chr5B 79.676 679 130 8 1874 2548 643461634 643462308 1.950000e-132 483.0
21 TraesCS4B01G316900 chr5B 94.203 69 4 0 3041 3109 600103704 600103636 4.930000e-19 106.0
22 TraesCS4B01G316900 chr5B 97.059 34 1 0 3009 3042 475686416 475686383 1.400000e-04 58.4
23 TraesCS4B01G316900 chr5A 80.377 1590 263 39 998 2555 640724644 640726216 0.000000e+00 1162.0
24 TraesCS4B01G316900 chr2A 80.180 1559 267 32 1014 2548 18358274 18359814 0.000000e+00 1129.0
25 TraesCS4B01G316900 chr2A 93.080 448 28 2 336 781 376516396 376516842 0.000000e+00 652.0
26 TraesCS4B01G316900 chr2B 94.820 444 21 1 334 775 797544976 797544533 0.000000e+00 691.0
27 TraesCS4B01G316900 chr2B 89.714 175 15 2 3440 3611 185754588 185754762 1.690000e-53 220.0
28 TraesCS4B01G316900 chr2B 87.912 182 18 3 3434 3611 155874323 155874142 1.020000e-50 211.0
29 TraesCS4B01G316900 chr7D 94.595 444 22 1 334 775 40692104 40691661 0.000000e+00 686.0
30 TraesCS4B01G316900 chr7A 94.749 438 21 1 342 777 47565138 47564701 0.000000e+00 680.0
31 TraesCS4B01G316900 chr7A 88.571 70 8 0 3038 3107 475208377 475208446 6.420000e-13 86.1
32 TraesCS4B01G316900 chr6B 94.369 444 23 1 332 773 21155339 21155782 0.000000e+00 680.0
33 TraesCS4B01G316900 chr6B 93.864 440 25 1 336 773 487791517 487791078 0.000000e+00 662.0
34 TraesCS4B01G316900 chr6B 89.503 181 15 3 3434 3611 85338313 85338134 3.630000e-55 226.0
35 TraesCS4B01G316900 chr6B 91.228 57 5 0 3053 3109 176694524 176694468 1.070000e-10 78.7
36 TraesCS4B01G316900 chr1A 94.286 420 22 1 337 754 567712650 567712231 3.040000e-180 641.0
37 TraesCS4B01G316900 chr3B 92.394 447 31 2 331 775 794300304 794300749 5.090000e-178 634.0
38 TraesCS4B01G316900 chr3D 92.099 443 33 1 333 773 453184680 453185122 1.100000e-174 623.0
39 TraesCS4B01G316900 chr2D 88.462 182 17 3 3434 3611 91797204 91797023 2.180000e-52 217.0
40 TraesCS4B01G316900 chr2D 87.912 182 18 3 3434 3611 105660632 105660813 1.020000e-50 211.0
41 TraesCS4B01G316900 chr6D 91.429 70 5 1 3041 3109 471234069 471234000 1.070000e-15 95.3
42 TraesCS4B01G316900 chr6A 90.000 70 6 1 3041 3109 615961229 615961160 4.970000e-14 89.8
43 TraesCS4B01G316900 chr3A 94.340 53 3 0 3041 3093 77899005 77899057 8.310000e-12 82.4
44 TraesCS4B01G316900 chr1D 91.111 45 3 1 2996 3039 279092657 279092701 3.890000e-05 60.2
45 TraesCS4B01G316900 chrUn 100.000 31 0 0 3009 3039 104848362 104848392 1.400000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G316900 chr4B 606763708 606767318 3610 False 3036.5 5742 100.0000 1 3611 2 chr4B.!!$F2 3610
1 TraesCS4B01G316900 chr4D 479540037 479543137 3100 False 888.8 3507 92.2542 1 3608 5 chr4D.!!$F1 3607
2 TraesCS4B01G316900 chr4A 685834609 685836455 1846 False 2950.0 2950 95.5230 811 2656 1 chr4A.!!$F2 1845
3 TraesCS4B01G316900 chr4A 632989706 632991239 1533 False 1561.0 1561 85.1330 1015 2551 1 chr4A.!!$F1 1536
4 TraesCS4B01G316900 chr4A 632998320 632999852 1532 True 1559.0 1559 85.1230 1015 2550 1 chr4A.!!$R3 1535
5 TraesCS4B01G316900 chr5D 537161315 537162874 1559 True 1513.0 1513 84.2980 1015 2575 1 chr5D.!!$R1 1560
6 TraesCS4B01G316900 chr5D 537088077 537089610 1533 False 1506.0 1506 84.4560 1015 2551 1 chr5D.!!$F2 1536
7 TraesCS4B01G316900 chr5D 512534342 512535918 1576 False 1179.0 1179 80.5280 997 2555 1 chr5D.!!$F1 1558
8 TraesCS4B01G316900 chr5B 677537454 677538990 1536 False 1498.0 1498 84.3770 1015 2551 1 chr5B.!!$F2 1536
9 TraesCS4B01G316900 chr5B 677543508 677545043 1535 True 1480.0 1480 84.1730 1015 2550 1 chr5B.!!$R3 1535
10 TraesCS4B01G316900 chr5B 643461634 643462308 674 False 483.0 483 79.6760 1874 2548 1 chr5B.!!$F1 674
11 TraesCS4B01G316900 chr5A 640724644 640726216 1572 False 1162.0 1162 80.3770 998 2555 1 chr5A.!!$F1 1557
12 TraesCS4B01G316900 chr2A 18358274 18359814 1540 False 1129.0 1129 80.1800 1014 2548 1 chr2A.!!$F1 1534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
728 731 0.030101 GAGGTGAGATCGAGAAGCCG 59.970 60.0 0.0 0.00 0.00 5.52 F
754 757 0.033699 AGGATTTCTGGAAGCTGGGC 60.034 55.0 0.0 0.00 0.00 5.36 F
758 761 0.185901 TTTCTGGAAGCTGGGCAGTT 59.814 50.0 0.0 0.00 0.00 3.16 F
986 1035 0.320334 TTTGGCACGAGATCTGCGAA 60.320 50.0 17.6 9.46 35.31 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1696 1747 0.173708 GTCTCCGGCATCTTCGTTCT 59.826 55.000 0.00 0.00 0.00 3.01 R
1923 1992 0.956902 TCTGGCTGTAGTACGCGACA 60.957 55.000 15.93 5.48 0.00 4.35 R
2175 2244 1.661480 CGTCGTCCAGTGGTGGTAA 59.339 57.895 9.54 0.00 45.28 2.85 R
2980 3055 0.813184 CGCTTCCATCTGCAAACCAT 59.187 50.000 0.00 0.00 0.00 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 1.004044 CCATCCACAGAAAGAGCCAGT 59.996 52.381 0.00 0.00 0.00 4.00
40 41 1.768275 TCCACAGAAAGAGCCAGTCAA 59.232 47.619 0.00 0.00 0.00 3.18
44 45 2.641815 ACAGAAAGAGCCAGTCAATCCT 59.358 45.455 0.00 0.00 0.00 3.24
83 84 1.963515 GGGAAGGTTGTGAACATGCTT 59.036 47.619 0.00 0.00 0.00 3.91
98 99 6.040278 TGAACATGCTTTGGTAAACATCTTCA 59.960 34.615 0.00 0.00 28.93 3.02
99 100 5.772521 ACATGCTTTGGTAAACATCTTCAC 58.227 37.500 0.00 0.00 0.00 3.18
101 102 4.130857 TGCTTTGGTAAACATCTTCACGA 58.869 39.130 0.00 0.00 0.00 4.35
102 103 4.576873 TGCTTTGGTAAACATCTTCACGAA 59.423 37.500 0.00 0.00 0.00 3.85
103 104 4.909880 GCTTTGGTAAACATCTTCACGAAC 59.090 41.667 0.00 0.00 0.00 3.95
126 127 7.905604 ACAACATCCCATATATAATGTCACG 57.094 36.000 7.60 0.00 31.37 4.35
145 146 6.071560 TGTCACGATTACTTTCACATACTCCT 60.072 38.462 0.00 0.00 0.00 3.69
148 149 6.414109 CACGATTACTTTCACATACTCCTACG 59.586 42.308 0.00 0.00 0.00 3.51
162 165 8.200120 ACATACTCCTACGAACCCTAAATAAAC 58.800 37.037 0.00 0.00 0.00 2.01
188 191 4.593206 AGTCCTAGGTTGAAGTTCATGTCA 59.407 41.667 9.08 0.00 0.00 3.58
194 197 6.126863 AGGTTGAAGTTCATGTCATAGGAA 57.873 37.500 6.36 0.00 0.00 3.36
219 222 5.409643 ACTTCAAAGATGAACACGTCTTG 57.590 39.130 0.00 0.00 40.59 3.02
223 226 5.547465 TCAAAGATGAACACGTCTTGGTAT 58.453 37.500 0.00 0.00 39.08 2.73
295 298 4.334118 TGCCCATGTGAGCGCTGT 62.334 61.111 18.48 0.00 0.00 4.40
300 303 0.174389 CCATGTGAGCGCTGTCTACT 59.826 55.000 18.48 0.00 0.00 2.57
327 330 1.144057 GCGGTAGGCAGCACATACT 59.856 57.895 0.00 0.00 42.87 2.12
328 331 0.876342 GCGGTAGGCAGCACATACTC 60.876 60.000 0.00 0.00 42.87 2.59
329 332 0.249489 CGGTAGGCAGCACATACTCC 60.249 60.000 0.00 0.00 0.00 3.85
330 333 1.123928 GGTAGGCAGCACATACTCCT 58.876 55.000 0.00 0.00 0.00 3.69
331 334 2.317040 GGTAGGCAGCACATACTCCTA 58.683 52.381 0.00 0.00 0.00 2.94
334 337 3.314307 AGGCAGCACATACTCCTACTA 57.686 47.619 0.00 0.00 0.00 1.82
336 339 3.639094 AGGCAGCACATACTCCTACTAAG 59.361 47.826 0.00 0.00 0.00 2.18
338 341 3.243907 GCAGCACATACTCCTACTAAGGG 60.244 52.174 0.00 0.00 43.84 3.95
340 343 2.037381 GCACATACTCCTACTAAGGGCC 59.963 54.545 0.00 0.00 43.84 5.80
341 344 3.577919 CACATACTCCTACTAAGGGCCT 58.422 50.000 0.00 0.00 43.84 5.19
342 345 3.322254 CACATACTCCTACTAAGGGCCTG 59.678 52.174 6.92 0.00 43.84 4.85
343 346 3.052033 ACATACTCCTACTAAGGGCCTGT 60.052 47.826 6.92 3.82 43.84 4.00
344 347 2.644060 ACTCCTACTAAGGGCCTGTT 57.356 50.000 6.92 0.00 43.84 3.16
345 348 2.468915 ACTCCTACTAAGGGCCTGTTC 58.531 52.381 6.92 0.00 43.84 3.18
346 349 1.409427 CTCCTACTAAGGGCCTGTTCG 59.591 57.143 6.92 0.00 43.84 3.95
347 350 0.464452 CCTACTAAGGGCCTGTTCGG 59.536 60.000 6.92 2.22 39.48 4.30
364 367 3.359002 GCAACTGCCCAACTCCTG 58.641 61.111 0.00 0.00 34.31 3.86
367 370 0.468029 CAACTGCCCAACTCCTGGTT 60.468 55.000 0.00 0.00 44.76 3.67
368 371 0.261696 AACTGCCCAACTCCTGGTTT 59.738 50.000 0.00 0.00 44.76 3.27
369 372 0.178990 ACTGCCCAACTCCTGGTTTC 60.179 55.000 0.00 0.00 44.76 2.78
370 373 0.111253 CTGCCCAACTCCTGGTTTCT 59.889 55.000 0.00 0.00 44.76 2.52
371 374 0.110486 TGCCCAACTCCTGGTTTCTC 59.890 55.000 0.00 0.00 44.76 2.87
373 376 1.884067 GCCCAACTCCTGGTTTCTCTG 60.884 57.143 0.00 0.00 44.76 3.35
374 377 1.699634 CCCAACTCCTGGTTTCTCTGA 59.300 52.381 0.00 0.00 44.76 3.27
375 378 2.106511 CCCAACTCCTGGTTTCTCTGAA 59.893 50.000 0.00 0.00 44.76 3.02
376 379 3.245052 CCCAACTCCTGGTTTCTCTGAAT 60.245 47.826 0.00 0.00 44.76 2.57
377 380 4.006319 CCAACTCCTGGTTTCTCTGAATC 58.994 47.826 0.00 0.00 40.78 2.52
378 381 4.505566 CCAACTCCTGGTTTCTCTGAATCA 60.506 45.833 0.00 0.00 40.78 2.57
379 382 4.550076 ACTCCTGGTTTCTCTGAATCAG 57.450 45.455 3.38 3.38 37.47 2.90
380 383 3.269178 CTCCTGGTTTCTCTGAATCAGC 58.731 50.000 5.18 0.00 36.62 4.26
381 384 2.005451 CCTGGTTTCTCTGAATCAGCG 58.995 52.381 5.18 0.00 36.62 5.18
382 385 2.005451 CTGGTTTCTCTGAATCAGCGG 58.995 52.381 5.18 1.22 31.60 5.52
383 386 1.339055 TGGTTTCTCTGAATCAGCGGG 60.339 52.381 5.18 0.00 0.00 6.13
384 387 0.729690 GTTTCTCTGAATCAGCGGGC 59.270 55.000 5.18 0.00 0.00 6.13
385 388 0.740868 TTTCTCTGAATCAGCGGGCG 60.741 55.000 5.18 0.00 0.00 6.13
386 389 1.604147 TTCTCTGAATCAGCGGGCGA 61.604 55.000 5.18 0.00 0.00 5.54
387 390 1.153568 CTCTGAATCAGCGGGCGAA 60.154 57.895 5.18 0.00 0.00 4.70
388 391 1.150567 CTCTGAATCAGCGGGCGAAG 61.151 60.000 5.18 0.00 0.00 3.79
401 404 3.862124 CGAAGCTGGACCGAACAG 58.138 61.111 0.00 0.00 38.95 3.16
411 414 2.266055 CCGAACAGGTCAGCTCCC 59.734 66.667 0.00 0.00 34.51 4.30
412 415 2.583441 CCGAACAGGTCAGCTCCCA 61.583 63.158 1.93 0.00 34.51 4.37
413 416 1.079543 CGAACAGGTCAGCTCCCAG 60.080 63.158 1.93 0.00 0.00 4.45
414 417 1.536073 CGAACAGGTCAGCTCCCAGA 61.536 60.000 1.93 0.00 0.00 3.86
415 418 0.687354 GAACAGGTCAGCTCCCAGAA 59.313 55.000 1.93 0.00 0.00 3.02
416 419 0.689623 AACAGGTCAGCTCCCAGAAG 59.310 55.000 1.93 0.00 0.00 2.85
417 420 1.078567 CAGGTCAGCTCCCAGAAGC 60.079 63.158 1.93 0.00 42.82 3.86
434 437 4.946478 GAAGCTAGCTTCCCAGATCTAA 57.054 45.455 37.06 0.00 44.76 2.10
435 438 4.881920 GAAGCTAGCTTCCCAGATCTAAG 58.118 47.826 37.06 0.00 44.76 2.18
436 439 4.191804 AGCTAGCTTCCCAGATCTAAGA 57.808 45.455 12.68 0.00 0.00 2.10
437 440 3.895041 AGCTAGCTTCCCAGATCTAAGAC 59.105 47.826 12.68 0.62 0.00 3.01
438 441 3.305064 GCTAGCTTCCCAGATCTAAGACG 60.305 52.174 7.70 1.53 0.00 4.18
439 442 2.035632 AGCTTCCCAGATCTAAGACGG 58.964 52.381 7.74 0.00 0.00 4.79
440 443 1.069358 GCTTCCCAGATCTAAGACGGG 59.931 57.143 8.50 8.50 38.34 5.28
441 444 2.389715 CTTCCCAGATCTAAGACGGGT 58.610 52.381 13.38 0.00 38.15 5.28
442 445 2.068834 TCCCAGATCTAAGACGGGTC 57.931 55.000 13.38 0.00 38.15 4.46
443 446 0.669077 CCCAGATCTAAGACGGGTCG 59.331 60.000 6.87 0.00 31.80 4.79
444 447 1.390565 CCAGATCTAAGACGGGTCGT 58.609 55.000 0.00 0.00 45.10 4.34
445 448 2.569059 CCAGATCTAAGACGGGTCGTA 58.431 52.381 0.00 0.00 41.37 3.43
446 449 2.548904 CCAGATCTAAGACGGGTCGTAG 59.451 54.545 13.42 13.42 41.37 3.51
447 450 3.204526 CAGATCTAAGACGGGTCGTAGT 58.795 50.000 17.30 8.36 41.37 2.73
448 451 4.375272 CAGATCTAAGACGGGTCGTAGTA 58.625 47.826 17.30 8.27 41.37 1.82
449 452 4.996122 CAGATCTAAGACGGGTCGTAGTAT 59.004 45.833 17.30 11.49 41.37 2.12
450 453 6.162079 CAGATCTAAGACGGGTCGTAGTATA 58.838 44.000 17.30 3.81 41.37 1.47
451 454 6.648310 CAGATCTAAGACGGGTCGTAGTATAA 59.352 42.308 17.30 3.53 41.37 0.98
452 455 7.172190 CAGATCTAAGACGGGTCGTAGTATAAA 59.828 40.741 17.30 3.24 41.37 1.40
453 456 7.716998 AGATCTAAGACGGGTCGTAGTATAAAA 59.283 37.037 17.30 2.67 41.37 1.52
454 457 7.624360 TCTAAGACGGGTCGTAGTATAAAAA 57.376 36.000 17.30 0.00 41.37 1.94
455 458 7.472543 TCTAAGACGGGTCGTAGTATAAAAAC 58.527 38.462 17.30 0.00 41.37 2.43
456 459 5.904362 AGACGGGTCGTAGTATAAAAACT 57.096 39.130 0.00 0.00 41.37 2.66
457 460 5.644644 AGACGGGTCGTAGTATAAAAACTG 58.355 41.667 0.00 0.00 41.37 3.16
458 461 4.747810 ACGGGTCGTAGTATAAAAACTGG 58.252 43.478 0.00 0.00 38.73 4.00
459 462 4.114794 CGGGTCGTAGTATAAAAACTGGG 58.885 47.826 0.00 0.00 0.00 4.45
460 463 4.142182 CGGGTCGTAGTATAAAAACTGGGA 60.142 45.833 0.00 0.00 0.00 4.37
461 464 5.354767 GGGTCGTAGTATAAAAACTGGGAG 58.645 45.833 0.00 0.00 0.00 4.30
462 465 4.807834 GGTCGTAGTATAAAAACTGGGAGC 59.192 45.833 0.00 0.00 0.00 4.70
463 466 4.501921 GTCGTAGTATAAAAACTGGGAGCG 59.498 45.833 0.00 0.00 0.00 5.03
464 467 4.398988 TCGTAGTATAAAAACTGGGAGCGA 59.601 41.667 0.00 0.00 0.00 4.93
465 468 4.738740 CGTAGTATAAAAACTGGGAGCGAG 59.261 45.833 0.00 0.00 0.00 5.03
466 469 4.820894 AGTATAAAAACTGGGAGCGAGT 57.179 40.909 0.00 0.00 0.00 4.18
467 470 4.504858 AGTATAAAAACTGGGAGCGAGTG 58.495 43.478 0.00 0.00 0.00 3.51
468 471 2.922740 TAAAAACTGGGAGCGAGTGT 57.077 45.000 0.00 0.00 0.00 3.55
469 472 2.052782 AAAAACTGGGAGCGAGTGTT 57.947 45.000 0.00 0.00 0.00 3.32
470 473 2.052782 AAAACTGGGAGCGAGTGTTT 57.947 45.000 0.00 0.00 33.04 2.83
471 474 1.594331 AAACTGGGAGCGAGTGTTTC 58.406 50.000 0.00 0.00 0.00 2.78
472 475 0.468226 AACTGGGAGCGAGTGTTTCA 59.532 50.000 0.00 0.00 0.00 2.69
473 476 0.687354 ACTGGGAGCGAGTGTTTCAT 59.313 50.000 0.00 0.00 0.00 2.57
474 477 1.081892 CTGGGAGCGAGTGTTTCATG 58.918 55.000 0.00 0.00 0.00 3.07
475 478 0.321564 TGGGAGCGAGTGTTTCATGG 60.322 55.000 0.00 0.00 0.00 3.66
476 479 0.036388 GGGAGCGAGTGTTTCATGGA 60.036 55.000 0.00 0.00 0.00 3.41
477 480 1.407437 GGGAGCGAGTGTTTCATGGAT 60.407 52.381 0.00 0.00 0.00 3.41
478 481 1.936547 GGAGCGAGTGTTTCATGGATC 59.063 52.381 0.00 0.00 0.00 3.36
479 482 1.936547 GAGCGAGTGTTTCATGGATCC 59.063 52.381 4.20 4.20 0.00 3.36
480 483 1.017387 GCGAGTGTTTCATGGATCCC 58.983 55.000 9.90 0.00 0.00 3.85
481 484 1.678728 GCGAGTGTTTCATGGATCCCA 60.679 52.381 9.90 0.00 38.19 4.37
482 485 2.283298 CGAGTGTTTCATGGATCCCAG 58.717 52.381 9.90 1.21 36.75 4.45
483 486 2.093500 CGAGTGTTTCATGGATCCCAGA 60.093 50.000 9.90 4.01 36.75 3.86
484 487 3.619733 CGAGTGTTTCATGGATCCCAGAA 60.620 47.826 9.90 10.50 36.75 3.02
485 488 4.335416 GAGTGTTTCATGGATCCCAGAAA 58.665 43.478 19.29 19.29 36.75 2.52
486 489 4.939255 AGTGTTTCATGGATCCCAGAAAT 58.061 39.130 23.53 11.29 36.75 2.17
487 490 4.952335 AGTGTTTCATGGATCCCAGAAATC 59.048 41.667 23.53 19.70 36.75 2.17
488 491 3.947196 TGTTTCATGGATCCCAGAAATCG 59.053 43.478 23.53 3.29 36.75 3.34
489 492 2.260844 TCATGGATCCCAGAAATCGC 57.739 50.000 9.90 0.00 36.75 4.58
490 493 1.490069 TCATGGATCCCAGAAATCGCA 59.510 47.619 9.90 0.00 36.75 5.10
491 494 1.878088 CATGGATCCCAGAAATCGCAG 59.122 52.381 9.90 0.00 36.75 5.18
492 495 1.203237 TGGATCCCAGAAATCGCAGA 58.797 50.000 9.90 0.00 45.75 4.26
493 496 1.559219 TGGATCCCAGAAATCGCAGAA 59.441 47.619 9.90 0.00 43.58 3.02
494 497 2.216898 GGATCCCAGAAATCGCAGAAG 58.783 52.381 0.00 0.00 43.58 2.85
495 498 1.601430 GATCCCAGAAATCGCAGAAGC 59.399 52.381 0.00 0.00 43.58 3.86
496 499 0.615331 TCCCAGAAATCGCAGAAGCT 59.385 50.000 0.00 0.00 43.58 3.74
497 500 0.731417 CCCAGAAATCGCAGAAGCTG 59.269 55.000 0.00 0.00 43.58 4.24
498 501 0.731417 CCAGAAATCGCAGAAGCTGG 59.269 55.000 0.00 0.00 43.58 4.85
499 502 1.730501 CAGAAATCGCAGAAGCTGGA 58.269 50.000 0.00 0.00 43.58 3.86
500 503 1.664659 CAGAAATCGCAGAAGCTGGAG 59.335 52.381 0.00 0.00 43.58 3.86
501 504 1.277557 AGAAATCGCAGAAGCTGGAGT 59.722 47.619 0.00 0.00 43.58 3.85
502 505 2.079925 GAAATCGCAGAAGCTGGAGTT 58.920 47.619 0.00 0.00 43.58 3.01
503 506 1.731720 AATCGCAGAAGCTGGAGTTC 58.268 50.000 0.00 0.00 43.58 3.01
504 507 0.610174 ATCGCAGAAGCTGGAGTTCA 59.390 50.000 0.00 0.00 43.58 3.18
505 508 0.392706 TCGCAGAAGCTGGAGTTCAA 59.607 50.000 0.00 0.00 39.10 2.69
506 509 0.795085 CGCAGAAGCTGGAGTTCAAG 59.205 55.000 0.00 0.00 39.10 3.02
507 510 1.875576 CGCAGAAGCTGGAGTTCAAGT 60.876 52.381 0.00 0.00 39.10 3.16
508 511 2.225467 GCAGAAGCTGGAGTTCAAGTT 58.775 47.619 0.00 0.00 37.91 2.66
509 512 3.403038 GCAGAAGCTGGAGTTCAAGTTA 58.597 45.455 0.00 0.00 37.91 2.24
510 513 4.006319 GCAGAAGCTGGAGTTCAAGTTAT 58.994 43.478 0.00 0.00 37.91 1.89
511 514 4.457257 GCAGAAGCTGGAGTTCAAGTTATT 59.543 41.667 0.00 0.00 37.91 1.40
512 515 5.048434 GCAGAAGCTGGAGTTCAAGTTATTT 60.048 40.000 0.00 0.00 37.91 1.40
513 516 6.149474 GCAGAAGCTGGAGTTCAAGTTATTTA 59.851 38.462 0.00 0.00 37.91 1.40
514 517 7.522374 CAGAAGCTGGAGTTCAAGTTATTTAC 58.478 38.462 0.00 0.00 0.00 2.01
515 518 6.369065 AGAAGCTGGAGTTCAAGTTATTTACG 59.631 38.462 0.00 0.00 0.00 3.18
516 519 4.935808 AGCTGGAGTTCAAGTTATTTACGG 59.064 41.667 0.00 0.00 0.00 4.02
517 520 4.436986 GCTGGAGTTCAAGTTATTTACGGC 60.437 45.833 0.00 0.00 0.00 5.68
518 521 3.680937 TGGAGTTCAAGTTATTTACGGCG 59.319 43.478 4.80 4.80 0.00 6.46
519 522 3.928375 GGAGTTCAAGTTATTTACGGCGA 59.072 43.478 16.62 0.00 0.00 5.54
520 523 4.032558 GGAGTTCAAGTTATTTACGGCGAG 59.967 45.833 16.62 0.00 0.00 5.03
521 524 3.370061 AGTTCAAGTTATTTACGGCGAGC 59.630 43.478 16.62 0.00 0.00 5.03
522 525 3.241067 TCAAGTTATTTACGGCGAGCT 57.759 42.857 16.62 0.00 0.00 4.09
523 526 2.927477 TCAAGTTATTTACGGCGAGCTG 59.073 45.455 16.62 1.84 0.00 4.24
524 527 1.287425 AGTTATTTACGGCGAGCTGC 58.713 50.000 16.62 0.00 45.38 5.25
534 537 2.434185 CGAGCTGCCACCGCTAAA 60.434 61.111 0.00 0.00 37.96 1.85
535 538 1.815421 CGAGCTGCCACCGCTAAAT 60.815 57.895 0.00 0.00 37.96 1.40
536 539 1.723870 GAGCTGCCACCGCTAAATG 59.276 57.895 0.00 0.00 37.96 2.32
537 540 0.744414 GAGCTGCCACCGCTAAATGA 60.744 55.000 0.00 0.00 37.96 2.57
538 541 0.322456 AGCTGCCACCGCTAAATGAA 60.322 50.000 0.00 0.00 35.63 2.57
539 542 0.525761 GCTGCCACCGCTAAATGAAA 59.474 50.000 0.00 0.00 35.36 2.69
540 543 1.468054 GCTGCCACCGCTAAATGAAAG 60.468 52.381 0.00 0.00 35.36 2.62
541 544 2.083774 CTGCCACCGCTAAATGAAAGA 58.916 47.619 0.00 0.00 35.36 2.52
542 545 2.487762 CTGCCACCGCTAAATGAAAGAA 59.512 45.455 0.00 0.00 35.36 2.52
543 546 2.887783 TGCCACCGCTAAATGAAAGAAA 59.112 40.909 0.00 0.00 35.36 2.52
544 547 3.319405 TGCCACCGCTAAATGAAAGAAAA 59.681 39.130 0.00 0.00 35.36 2.29
545 548 3.673338 GCCACCGCTAAATGAAAGAAAAC 59.327 43.478 0.00 0.00 0.00 2.43
546 549 3.911964 CCACCGCTAAATGAAAGAAAACG 59.088 43.478 0.00 0.00 0.00 3.60
547 550 3.360758 CACCGCTAAATGAAAGAAAACGC 59.639 43.478 0.00 0.00 0.00 4.84
548 551 3.252458 ACCGCTAAATGAAAGAAAACGCT 59.748 39.130 0.00 0.00 0.00 5.07
549 552 4.226761 CCGCTAAATGAAAGAAAACGCTT 58.773 39.130 0.00 0.00 0.00 4.68
550 553 4.320953 CCGCTAAATGAAAGAAAACGCTTC 59.679 41.667 0.00 0.00 0.00 3.86
551 554 4.027991 CGCTAAATGAAAGAAAACGCTTCG 59.972 41.667 0.00 0.00 0.00 3.79
552 555 4.909880 GCTAAATGAAAGAAAACGCTTCGT 59.090 37.500 0.00 0.00 43.97 3.85
553 556 6.075280 GCTAAATGAAAGAAAACGCTTCGTA 58.925 36.000 0.00 0.00 39.99 3.43
554 557 6.031107 GCTAAATGAAAGAAAACGCTTCGTAC 59.969 38.462 0.00 0.00 39.99 3.67
555 558 5.412526 AATGAAAGAAAACGCTTCGTACA 57.587 34.783 0.00 0.00 39.99 2.90
556 559 4.446857 TGAAAGAAAACGCTTCGTACAG 57.553 40.909 0.00 0.00 39.99 2.74
557 560 3.246699 TGAAAGAAAACGCTTCGTACAGG 59.753 43.478 0.00 0.00 39.99 4.00
558 561 1.792006 AGAAAACGCTTCGTACAGGG 58.208 50.000 0.00 0.00 39.99 4.45
559 562 1.342174 AGAAAACGCTTCGTACAGGGA 59.658 47.619 4.53 0.00 39.99 4.20
560 563 2.137523 GAAAACGCTTCGTACAGGGAA 58.862 47.619 4.53 0.00 39.99 3.97
561 564 1.792006 AAACGCTTCGTACAGGGAAG 58.208 50.000 4.53 4.79 39.99 3.46
562 565 0.963962 AACGCTTCGTACAGGGAAGA 59.036 50.000 11.75 0.00 42.74 2.87
563 566 0.963962 ACGCTTCGTACAGGGAAGAA 59.036 50.000 11.75 0.00 42.74 2.52
564 567 1.549170 ACGCTTCGTACAGGGAAGAAT 59.451 47.619 11.75 0.00 42.74 2.40
565 568 2.756760 ACGCTTCGTACAGGGAAGAATA 59.243 45.455 11.75 0.00 42.74 1.75
566 569 3.181489 ACGCTTCGTACAGGGAAGAATAG 60.181 47.826 11.75 4.08 42.74 1.73
567 570 3.066342 CGCTTCGTACAGGGAAGAATAGA 59.934 47.826 11.75 0.00 42.74 1.98
568 571 4.439700 CGCTTCGTACAGGGAAGAATAGAA 60.440 45.833 11.75 0.00 42.74 2.10
569 572 4.804665 GCTTCGTACAGGGAAGAATAGAAC 59.195 45.833 11.75 0.00 42.74 3.01
570 573 4.627611 TCGTACAGGGAAGAATAGAACG 57.372 45.455 0.00 0.00 0.00 3.95
571 574 3.114065 CGTACAGGGAAGAATAGAACGC 58.886 50.000 0.00 0.00 0.00 4.84
572 575 3.428452 CGTACAGGGAAGAATAGAACGCA 60.428 47.826 0.00 0.00 0.00 5.24
573 576 3.252974 ACAGGGAAGAATAGAACGCAG 57.747 47.619 0.00 0.00 0.00 5.18
574 577 1.936547 CAGGGAAGAATAGAACGCAGC 59.063 52.381 0.00 0.00 0.00 5.25
575 578 1.555075 AGGGAAGAATAGAACGCAGCA 59.445 47.619 0.00 0.00 0.00 4.41
576 579 2.027192 AGGGAAGAATAGAACGCAGCAA 60.027 45.455 0.00 0.00 0.00 3.91
577 580 2.096013 GGGAAGAATAGAACGCAGCAAC 59.904 50.000 0.00 0.00 0.00 4.17
578 581 3.003480 GGAAGAATAGAACGCAGCAACT 58.997 45.455 0.00 0.00 0.00 3.16
579 582 4.181578 GGAAGAATAGAACGCAGCAACTA 58.818 43.478 0.00 0.00 0.00 2.24
580 583 4.033014 GGAAGAATAGAACGCAGCAACTAC 59.967 45.833 0.00 0.00 0.00 2.73
581 584 3.522553 AGAATAGAACGCAGCAACTACC 58.477 45.455 0.00 0.00 0.00 3.18
582 585 3.195825 AGAATAGAACGCAGCAACTACCT 59.804 43.478 0.00 0.00 0.00 3.08
583 586 3.611766 ATAGAACGCAGCAACTACCTT 57.388 42.857 0.00 0.00 0.00 3.50
584 587 1.797025 AGAACGCAGCAACTACCTTC 58.203 50.000 0.00 0.00 0.00 3.46
585 588 0.438830 GAACGCAGCAACTACCTTCG 59.561 55.000 0.00 0.00 0.00 3.79
586 589 1.566018 AACGCAGCAACTACCTTCGC 61.566 55.000 0.00 0.00 0.00 4.70
587 590 1.738099 CGCAGCAACTACCTTCGCT 60.738 57.895 0.00 0.00 34.29 4.93
588 591 1.687494 CGCAGCAACTACCTTCGCTC 61.687 60.000 0.00 0.00 30.72 5.03
589 592 1.362406 GCAGCAACTACCTTCGCTCC 61.362 60.000 0.00 0.00 30.72 4.70
590 593 0.741221 CAGCAACTACCTTCGCTCCC 60.741 60.000 0.00 0.00 30.72 4.30
591 594 0.905337 AGCAACTACCTTCGCTCCCT 60.905 55.000 0.00 0.00 0.00 4.20
592 595 0.822164 GCAACTACCTTCGCTCCCTA 59.178 55.000 0.00 0.00 0.00 3.53
593 596 1.206371 GCAACTACCTTCGCTCCCTAA 59.794 52.381 0.00 0.00 0.00 2.69
594 597 2.889852 CAACTACCTTCGCTCCCTAAC 58.110 52.381 0.00 0.00 0.00 2.34
595 598 2.226962 ACTACCTTCGCTCCCTAACA 57.773 50.000 0.00 0.00 0.00 2.41
596 599 2.100989 ACTACCTTCGCTCCCTAACAG 58.899 52.381 0.00 0.00 0.00 3.16
597 600 1.409427 CTACCTTCGCTCCCTAACAGG 59.591 57.143 0.00 0.00 34.30 4.00
598 601 1.153349 CCTTCGCTCCCTAACAGGC 60.153 63.158 0.00 0.00 32.73 4.85
599 602 1.153349 CTTCGCTCCCTAACAGGCC 60.153 63.158 0.00 0.00 32.73 5.19
600 603 1.899437 CTTCGCTCCCTAACAGGCCA 61.899 60.000 5.01 0.00 32.73 5.36
601 604 1.899437 TTCGCTCCCTAACAGGCCAG 61.899 60.000 5.01 0.00 32.73 4.85
602 605 2.359169 CGCTCCCTAACAGGCCAGA 61.359 63.158 5.01 0.00 32.73 3.86
603 606 1.899437 CGCTCCCTAACAGGCCAGAA 61.899 60.000 5.01 0.00 32.73 3.02
604 607 0.548510 GCTCCCTAACAGGCCAGAAT 59.451 55.000 5.01 0.00 32.73 2.40
605 608 1.475930 GCTCCCTAACAGGCCAGAATC 60.476 57.143 5.01 0.00 32.73 2.52
606 609 0.830648 TCCCTAACAGGCCAGAATCG 59.169 55.000 5.01 0.00 32.73 3.34
607 610 0.815615 CCCTAACAGGCCAGAATCGC 60.816 60.000 5.01 0.00 32.73 4.58
608 611 0.179000 CCTAACAGGCCAGAATCGCT 59.821 55.000 5.01 0.00 0.00 4.93
609 612 1.407437 CCTAACAGGCCAGAATCGCTT 60.407 52.381 5.01 0.00 0.00 4.68
610 613 2.158957 CCTAACAGGCCAGAATCGCTTA 60.159 50.000 5.01 0.00 0.00 3.09
611 614 2.489938 AACAGGCCAGAATCGCTTAA 57.510 45.000 5.01 0.00 0.00 1.85
612 615 2.717639 ACAGGCCAGAATCGCTTAAT 57.282 45.000 5.01 0.00 0.00 1.40
613 616 2.292267 ACAGGCCAGAATCGCTTAATG 58.708 47.619 5.01 0.00 0.00 1.90
614 617 1.605710 CAGGCCAGAATCGCTTAATGG 59.394 52.381 5.01 0.00 0.00 3.16
615 618 0.954452 GGCCAGAATCGCTTAATGGG 59.046 55.000 0.00 0.00 0.00 4.00
616 619 0.312102 GCCAGAATCGCTTAATGGGC 59.688 55.000 5.24 0.00 0.00 5.36
617 620 0.954452 CCAGAATCGCTTAATGGGCC 59.046 55.000 0.00 0.00 0.00 5.80
618 621 1.679139 CAGAATCGCTTAATGGGCCA 58.321 50.000 9.61 9.61 0.00 5.36
619 622 1.605710 CAGAATCGCTTAATGGGCCAG 59.394 52.381 13.78 0.00 0.00 4.85
620 623 0.312102 GAATCGCTTAATGGGCCAGC 59.688 55.000 13.78 9.10 0.00 4.85
621 624 1.109323 AATCGCTTAATGGGCCAGCC 61.109 55.000 13.78 0.00 0.00 4.85
622 625 3.585990 CGCTTAATGGGCCAGCCG 61.586 66.667 13.78 6.03 36.85 5.52
623 626 3.219198 GCTTAATGGGCCAGCCGG 61.219 66.667 13.78 0.00 36.85 6.13
642 645 0.179070 GCTACCAGCCCAAGACTAGC 60.179 60.000 0.00 0.00 34.48 3.42
643 646 0.103208 CTACCAGCCCAAGACTAGCG 59.897 60.000 0.00 0.00 0.00 4.26
644 647 0.323999 TACCAGCCCAAGACTAGCGA 60.324 55.000 0.00 0.00 0.00 4.93
645 648 1.192146 ACCAGCCCAAGACTAGCGAA 61.192 55.000 0.00 0.00 0.00 4.70
646 649 0.741221 CCAGCCCAAGACTAGCGAAC 60.741 60.000 0.00 0.00 0.00 3.95
647 650 0.247736 CAGCCCAAGACTAGCGAACT 59.752 55.000 0.00 0.00 0.00 3.01
648 651 0.247736 AGCCCAAGACTAGCGAACTG 59.752 55.000 0.00 0.00 0.00 3.16
649 652 0.741221 GCCCAAGACTAGCGAACTGG 60.741 60.000 0.00 0.00 0.00 4.00
650 653 0.108138 CCCAAGACTAGCGAACTGGG 60.108 60.000 0.00 0.00 0.00 4.45
651 654 0.895530 CCAAGACTAGCGAACTGGGA 59.104 55.000 0.00 0.00 0.00 4.37
652 655 1.482593 CCAAGACTAGCGAACTGGGAT 59.517 52.381 0.00 0.00 0.00 3.85
653 656 2.482142 CCAAGACTAGCGAACTGGGATC 60.482 54.545 0.00 0.00 0.00 3.36
654 657 2.428890 CAAGACTAGCGAACTGGGATCT 59.571 50.000 0.00 0.00 0.00 2.75
655 658 2.028130 AGACTAGCGAACTGGGATCTG 58.972 52.381 0.00 0.00 0.00 2.90
656 659 1.751924 GACTAGCGAACTGGGATCTGT 59.248 52.381 0.00 0.00 0.00 3.41
657 660 1.478510 ACTAGCGAACTGGGATCTGTG 59.521 52.381 0.00 0.00 0.00 3.66
658 661 1.751351 CTAGCGAACTGGGATCTGTGA 59.249 52.381 0.00 0.00 0.00 3.58
659 662 0.976641 AGCGAACTGGGATCTGTGAA 59.023 50.000 0.00 0.00 0.00 3.18
660 663 1.556911 AGCGAACTGGGATCTGTGAAT 59.443 47.619 0.00 0.00 0.00 2.57
661 664 2.026822 AGCGAACTGGGATCTGTGAATT 60.027 45.455 0.00 0.00 0.00 2.17
662 665 2.352960 GCGAACTGGGATCTGTGAATTC 59.647 50.000 0.00 0.00 0.00 2.17
663 666 3.866651 CGAACTGGGATCTGTGAATTCT 58.133 45.455 7.05 0.00 0.00 2.40
664 667 3.620374 CGAACTGGGATCTGTGAATTCTG 59.380 47.826 7.05 0.00 0.00 3.02
665 668 4.583871 GAACTGGGATCTGTGAATTCTGT 58.416 43.478 7.05 0.00 0.00 3.41
666 669 4.647564 ACTGGGATCTGTGAATTCTGTT 57.352 40.909 7.05 0.00 0.00 3.16
667 670 4.330250 ACTGGGATCTGTGAATTCTGTTG 58.670 43.478 7.05 0.00 0.00 3.33
668 671 3.084039 TGGGATCTGTGAATTCTGTTGC 58.916 45.455 7.05 0.00 0.00 4.17
669 672 2.424956 GGGATCTGTGAATTCTGTTGCC 59.575 50.000 7.05 3.84 0.00 4.52
670 673 2.096496 GGATCTGTGAATTCTGTTGCCG 59.904 50.000 7.05 0.00 0.00 5.69
671 674 2.542020 TCTGTGAATTCTGTTGCCGA 57.458 45.000 7.05 0.00 0.00 5.54
672 675 2.844946 TCTGTGAATTCTGTTGCCGAA 58.155 42.857 7.05 0.00 0.00 4.30
673 676 2.548057 TCTGTGAATTCTGTTGCCGAAC 59.452 45.455 7.05 0.00 0.00 3.95
674 677 1.262950 TGTGAATTCTGTTGCCGAACG 59.737 47.619 7.05 0.00 34.49 3.95
675 678 0.871722 TGAATTCTGTTGCCGAACGG 59.128 50.000 9.00 9.00 39.52 4.44
676 679 0.872388 GAATTCTGTTGCCGAACGGT 59.128 50.000 14.63 0.00 39.24 4.83
677 680 1.265905 GAATTCTGTTGCCGAACGGTT 59.734 47.619 14.63 0.00 39.24 4.44
678 681 1.314730 ATTCTGTTGCCGAACGGTTT 58.685 45.000 14.63 0.00 39.24 3.27
679 682 1.096416 TTCTGTTGCCGAACGGTTTT 58.904 45.000 14.63 0.00 39.24 2.43
680 683 1.096416 TCTGTTGCCGAACGGTTTTT 58.904 45.000 14.63 0.00 39.24 1.94
681 684 1.064357 TCTGTTGCCGAACGGTTTTTC 59.936 47.619 14.63 0.00 39.24 2.29
682 685 1.064952 CTGTTGCCGAACGGTTTTTCT 59.935 47.619 14.63 0.00 34.21 2.52
683 686 1.202200 TGTTGCCGAACGGTTTTTCTG 60.202 47.619 14.63 0.00 37.65 3.02
684 687 1.064357 GTTGCCGAACGGTTTTTCTGA 59.936 47.619 14.63 0.00 37.65 3.27
685 688 1.600023 TGCCGAACGGTTTTTCTGAT 58.400 45.000 14.63 0.00 37.65 2.90
686 689 1.533731 TGCCGAACGGTTTTTCTGATC 59.466 47.619 14.63 0.00 37.65 2.92
687 690 1.135774 GCCGAACGGTTTTTCTGATCC 60.136 52.381 14.63 0.00 37.65 3.36
688 691 2.147958 CCGAACGGTTTTTCTGATCCA 58.852 47.619 4.99 0.00 0.00 3.41
689 692 2.095919 CCGAACGGTTTTTCTGATCCAC 60.096 50.000 4.99 0.00 0.00 4.02
690 693 2.806244 CGAACGGTTTTTCTGATCCACT 59.194 45.455 0.00 0.00 0.00 4.00
691 694 3.991773 CGAACGGTTTTTCTGATCCACTA 59.008 43.478 0.00 0.00 0.00 2.74
692 695 4.630069 CGAACGGTTTTTCTGATCCACTAT 59.370 41.667 0.00 0.00 0.00 2.12
693 696 5.121768 CGAACGGTTTTTCTGATCCACTATT 59.878 40.000 0.00 0.00 0.00 1.73
694 697 6.348213 CGAACGGTTTTTCTGATCCACTATTT 60.348 38.462 0.00 0.00 0.00 1.40
695 698 6.894339 ACGGTTTTTCTGATCCACTATTTT 57.106 33.333 0.00 0.00 0.00 1.82
696 699 6.909909 ACGGTTTTTCTGATCCACTATTTTC 58.090 36.000 0.00 0.00 0.00 2.29
697 700 6.021596 CGGTTTTTCTGATCCACTATTTTCG 58.978 40.000 0.00 0.00 0.00 3.46
698 701 6.348213 CGGTTTTTCTGATCCACTATTTTCGT 60.348 38.462 0.00 0.00 0.00 3.85
699 702 7.021790 GGTTTTTCTGATCCACTATTTTCGTC 58.978 38.462 0.00 0.00 0.00 4.20
700 703 6.403333 TTTTCTGATCCACTATTTTCGTCG 57.597 37.500 0.00 0.00 0.00 5.12
701 704 4.041740 TCTGATCCACTATTTTCGTCGG 57.958 45.455 0.00 0.00 0.00 4.79
702 705 3.123804 CTGATCCACTATTTTCGTCGGG 58.876 50.000 0.00 0.00 0.00 5.14
703 706 2.761767 TGATCCACTATTTTCGTCGGGA 59.238 45.455 0.00 0.00 0.00 5.14
704 707 3.196039 TGATCCACTATTTTCGTCGGGAA 59.804 43.478 0.00 0.00 0.00 3.97
705 708 3.241067 TCCACTATTTTCGTCGGGAAG 57.759 47.619 0.00 0.00 35.70 3.46
706 709 1.664151 CCACTATTTTCGTCGGGAAGC 59.336 52.381 0.00 0.00 35.70 3.86
707 710 2.618053 CACTATTTTCGTCGGGAAGCT 58.382 47.619 0.00 0.00 35.70 3.74
708 711 2.348666 CACTATTTTCGTCGGGAAGCTG 59.651 50.000 0.00 0.00 35.70 4.24
709 712 1.933853 CTATTTTCGTCGGGAAGCTGG 59.066 52.381 0.00 0.00 35.70 4.85
710 713 0.323629 ATTTTCGTCGGGAAGCTGGA 59.676 50.000 0.00 0.00 35.70 3.86
711 714 0.320421 TTTTCGTCGGGAAGCTGGAG 60.320 55.000 0.00 0.00 35.70 3.86
712 715 2.167398 TTTCGTCGGGAAGCTGGAGG 62.167 60.000 0.00 0.00 35.70 4.30
713 716 3.382832 CGTCGGGAAGCTGGAGGT 61.383 66.667 0.00 0.00 0.00 3.85
714 717 2.266055 GTCGGGAAGCTGGAGGTG 59.734 66.667 0.00 0.00 0.00 4.00
715 718 2.119611 TCGGGAAGCTGGAGGTGA 59.880 61.111 0.00 0.00 0.00 4.02
716 719 1.984570 TCGGGAAGCTGGAGGTGAG 60.985 63.158 0.00 0.00 0.00 3.51
717 720 1.984570 CGGGAAGCTGGAGGTGAGA 60.985 63.158 0.00 0.00 0.00 3.27
718 721 1.333636 CGGGAAGCTGGAGGTGAGAT 61.334 60.000 0.00 0.00 0.00 2.75
719 722 0.467804 GGGAAGCTGGAGGTGAGATC 59.532 60.000 0.00 0.00 0.00 2.75
720 723 0.103937 GGAAGCTGGAGGTGAGATCG 59.896 60.000 0.00 0.00 0.00 3.69
721 724 1.107114 GAAGCTGGAGGTGAGATCGA 58.893 55.000 0.00 0.00 0.00 3.59
722 725 1.066908 GAAGCTGGAGGTGAGATCGAG 59.933 57.143 0.00 0.00 0.00 4.04
723 726 0.257328 AGCTGGAGGTGAGATCGAGA 59.743 55.000 0.00 0.00 0.00 4.04
724 727 1.107114 GCTGGAGGTGAGATCGAGAA 58.893 55.000 0.00 0.00 0.00 2.87
725 728 1.066908 GCTGGAGGTGAGATCGAGAAG 59.933 57.143 0.00 0.00 0.00 2.85
726 729 1.066908 CTGGAGGTGAGATCGAGAAGC 59.933 57.143 0.00 0.00 0.00 3.86
727 730 0.387565 GGAGGTGAGATCGAGAAGCC 59.612 60.000 0.00 0.00 0.00 4.35
728 731 0.030101 GAGGTGAGATCGAGAAGCCG 59.970 60.000 0.00 0.00 0.00 5.52
729 732 1.066587 GGTGAGATCGAGAAGCCGG 59.933 63.158 0.00 0.00 0.00 6.13
730 733 1.384989 GGTGAGATCGAGAAGCCGGA 61.385 60.000 5.05 0.00 0.00 5.14
731 734 0.671251 GTGAGATCGAGAAGCCGGAT 59.329 55.000 5.05 0.00 0.00 4.18
732 735 1.067821 GTGAGATCGAGAAGCCGGATT 59.932 52.381 3.61 3.61 0.00 3.01
733 736 1.757118 TGAGATCGAGAAGCCGGATTT 59.243 47.619 6.32 0.00 0.00 2.17
734 737 2.131183 GAGATCGAGAAGCCGGATTTG 58.869 52.381 6.32 0.00 0.00 2.32
735 738 1.757118 AGATCGAGAAGCCGGATTTGA 59.243 47.619 6.32 5.88 0.00 2.69
736 739 2.131183 GATCGAGAAGCCGGATTTGAG 58.869 52.381 6.32 0.58 0.00 3.02
737 740 0.175760 TCGAGAAGCCGGATTTGAGG 59.824 55.000 6.32 0.00 0.00 3.86
738 741 0.175760 CGAGAAGCCGGATTTGAGGA 59.824 55.000 6.32 0.00 0.00 3.71
739 742 1.202580 CGAGAAGCCGGATTTGAGGAT 60.203 52.381 6.32 0.00 0.00 3.24
740 743 2.743183 CGAGAAGCCGGATTTGAGGATT 60.743 50.000 6.32 0.00 39.04 3.01
741 744 3.282885 GAGAAGCCGGATTTGAGGATTT 58.717 45.455 6.32 0.00 36.13 2.17
742 745 3.282885 AGAAGCCGGATTTGAGGATTTC 58.717 45.455 6.32 0.00 36.13 2.17
743 746 3.054065 AGAAGCCGGATTTGAGGATTTCT 60.054 43.478 6.32 0.00 36.13 2.52
744 747 2.648059 AGCCGGATTTGAGGATTTCTG 58.352 47.619 5.05 0.00 0.00 3.02
745 748 1.678101 GCCGGATTTGAGGATTTCTGG 59.322 52.381 5.05 0.00 37.63 3.86
746 749 2.683742 GCCGGATTTGAGGATTTCTGGA 60.684 50.000 5.05 0.00 36.87 3.86
747 750 3.620488 CCGGATTTGAGGATTTCTGGAA 58.380 45.455 0.00 0.00 36.87 3.53
748 751 3.629398 CCGGATTTGAGGATTTCTGGAAG 59.371 47.826 0.00 0.00 36.87 3.46
749 752 3.065925 CGGATTTGAGGATTTCTGGAAGC 59.934 47.826 0.00 0.00 0.00 3.86
750 753 4.276642 GGATTTGAGGATTTCTGGAAGCT 58.723 43.478 0.00 0.00 0.00 3.74
751 754 4.097589 GGATTTGAGGATTTCTGGAAGCTG 59.902 45.833 0.00 0.00 0.00 4.24
752 755 2.795231 TGAGGATTTCTGGAAGCTGG 57.205 50.000 0.00 0.00 0.00 4.85
753 756 1.283029 TGAGGATTTCTGGAAGCTGGG 59.717 52.381 0.00 0.00 0.00 4.45
754 757 0.033699 AGGATTTCTGGAAGCTGGGC 60.034 55.000 0.00 0.00 0.00 5.36
755 758 0.323725 GGATTTCTGGAAGCTGGGCA 60.324 55.000 0.00 0.00 0.00 5.36
756 759 1.101331 GATTTCTGGAAGCTGGGCAG 58.899 55.000 0.00 0.00 0.00 4.85
757 760 0.407139 ATTTCTGGAAGCTGGGCAGT 59.593 50.000 0.00 0.00 0.00 4.40
758 761 0.185901 TTTCTGGAAGCTGGGCAGTT 59.814 50.000 0.00 0.00 0.00 3.16
759 762 0.538057 TTCTGGAAGCTGGGCAGTTG 60.538 55.000 0.00 0.00 0.00 3.16
760 763 2.598394 TGGAAGCTGGGCAGTTGC 60.598 61.111 0.00 0.00 41.14 4.17
780 783 3.485463 CCGAACAGGCCCTAATTATCA 57.515 47.619 0.00 0.00 0.00 2.15
781 784 3.815809 CCGAACAGGCCCTAATTATCAA 58.184 45.455 0.00 0.00 0.00 2.57
782 785 4.204012 CCGAACAGGCCCTAATTATCAAA 58.796 43.478 0.00 0.00 0.00 2.69
783 786 4.827284 CCGAACAGGCCCTAATTATCAAAT 59.173 41.667 0.00 0.00 0.00 2.32
784 787 5.048713 CCGAACAGGCCCTAATTATCAAATC 60.049 44.000 0.00 0.00 0.00 2.17
785 788 5.334105 CGAACAGGCCCTAATTATCAAATCG 60.334 44.000 0.00 0.00 0.00 3.34
786 789 5.048846 ACAGGCCCTAATTATCAAATCGT 57.951 39.130 0.00 0.00 0.00 3.73
787 790 4.821805 ACAGGCCCTAATTATCAAATCGTG 59.178 41.667 0.00 0.00 0.00 4.35
819 822 2.154567 TTCCCTAGCTGTATCCGTGT 57.845 50.000 0.00 0.00 0.00 4.49
835 838 1.457303 CGTGTAAGCAACAGACTCTGC 59.543 52.381 5.92 0.00 39.29 4.26
842 845 2.370189 AGCAACAGACTCTGCTTACCTT 59.630 45.455 5.92 0.00 46.71 3.50
843 846 3.142174 GCAACAGACTCTGCTTACCTTT 58.858 45.455 5.92 0.00 34.37 3.11
912 915 4.024893 CGCATCCAAATCTATAAACGTGCT 60.025 41.667 0.00 0.00 0.00 4.40
920 923 4.823790 TCTATAAACGTGCTGCTCGATA 57.176 40.909 27.89 19.60 0.00 2.92
986 1035 0.320334 TTTGGCACGAGATCTGCGAA 60.320 50.000 17.60 9.46 35.31 4.70
993 1042 1.515954 GAGATCTGCGAAACCCCGA 59.484 57.895 0.00 0.00 0.00 5.14
1101 1150 0.609131 CCGGCATGGGTTTCTTCACT 60.609 55.000 0.00 0.00 0.00 3.41
1314 1365 1.354155 CGTCTACGGCATGACGCTA 59.646 57.895 23.72 11.81 46.94 4.26
1404 1455 1.294659 CGCTCTGCTTCTTCCGCTTT 61.295 55.000 0.00 0.00 0.00 3.51
1416 1467 2.644992 CGCTTTTGGCTCGGCTTT 59.355 55.556 0.00 0.00 39.13 3.51
1696 1747 1.651240 GGCGCTCACGTACTACTGGA 61.651 60.000 7.64 0.00 42.83 3.86
1866 1935 1.287041 GCCTCTTTACGTCGCGGTTT 61.287 55.000 6.13 0.00 0.00 3.27
1923 1992 2.264794 GCGTGGTTCCTGGTCGAT 59.735 61.111 0.00 0.00 0.00 3.59
1965 2034 6.216456 AGAACCTATTCCAGAAGGACATCTTT 59.784 38.462 0.00 0.00 45.73 2.52
2487 2556 1.152546 GTGCAACCTCCTGGGGTTT 60.153 57.895 14.57 0.00 46.21 3.27
2697 2772 0.176219 TGTCGTGACCGGAACTTTGT 59.824 50.000 9.46 0.00 33.95 2.83
2743 2818 2.866156 CACTGTTACATGGTAGGCATCG 59.134 50.000 0.00 0.00 0.00 3.84
2775 2850 2.749621 CGCTTGATCTTAGCCAAAAGGT 59.250 45.455 12.74 0.00 35.18 3.50
2791 2866 7.608761 AGCCAAAAGGTCGACAAAAATATACTA 59.391 33.333 18.91 0.00 0.00 1.82
2830 2905 9.612066 AGGAAACATCAAGATTTTAGATCTCTC 57.388 33.333 0.00 0.00 0.00 3.20
2834 2909 8.006298 ACATCAAGATTTTAGATCTCTCGACT 57.994 34.615 0.00 0.00 0.00 4.18
2871 2946 5.428253 TGCAGAGAGAAACTTGTGTTACTT 58.572 37.500 0.00 0.00 34.96 2.24
2919 2994 8.950210 AGATGACATAAATGTTTTGAGTCGAAT 58.050 29.630 0.00 0.00 41.95 3.34
2943 3018 4.577687 TTGAACTGTCATTAACGATCGC 57.422 40.909 16.60 0.00 32.48 4.58
3001 3076 1.589716 GGTTTGCAGATGGAAGCGCT 61.590 55.000 2.64 2.64 0.00 5.92
3026 3101 1.644509 GTTGGGCAAGGGGAGATTTT 58.355 50.000 0.00 0.00 0.00 1.82
3088 3259 7.027778 AGAACCTGAAACATAAACTCACAAC 57.972 36.000 0.00 0.00 0.00 3.32
3098 3269 7.061752 ACATAAACTCACAACGAGAAATAGC 57.938 36.000 0.00 0.00 45.45 2.97
3103 3274 4.620184 ACTCACAACGAGAAATAGCGTAAC 59.380 41.667 0.00 0.00 45.45 2.50
3108 3279 4.025015 ACGAGAAATAGCGTAACGTGAT 57.975 40.909 0.00 0.00 39.21 3.06
3505 3676 6.368791 GCAAGATGTTTATTTCCCCACTTTTC 59.631 38.462 0.00 0.00 0.00 2.29
3513 3684 7.703058 TTATTTCCCCACTTTTCTGAAGATC 57.297 36.000 0.00 0.00 0.00 2.75
3517 3688 3.698040 CCCCACTTTTCTGAAGATCATGG 59.302 47.826 0.00 0.00 0.00 3.66
3518 3689 3.698040 CCCACTTTTCTGAAGATCATGGG 59.302 47.826 10.78 10.78 38.46 4.00
3523 3694 6.865205 CACTTTTCTGAAGATCATGGGAAAAC 59.135 38.462 0.00 0.00 30.28 2.43
3540 3711 5.651139 GGGAAAACCCACTTAGGAGAAATAC 59.349 44.000 0.00 0.00 41.22 1.89
3541 3712 6.243148 GGAAAACCCACTTAGGAGAAATACA 58.757 40.000 0.00 0.00 41.22 2.29
3542 3713 6.890268 GGAAAACCCACTTAGGAGAAATACAT 59.110 38.462 0.00 0.00 41.22 2.29
3546 3717 9.462606 AAACCCACTTAGGAGAAATACATTTAG 57.537 33.333 0.00 0.00 41.22 1.85
3578 3749 6.127563 TGCTCTTGATGTATCATGTTTGCATT 60.128 34.615 14.51 0.00 36.56 3.56
3608 3781 5.353400 CACATGCCGCATTATCTTCATAGAT 59.647 40.000 2.16 0.00 43.51 1.98
3609 3782 6.536224 CACATGCCGCATTATCTTCATAGATA 59.464 38.462 2.16 0.00 41.38 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.079490 TGTGGATGGGTCCTTCTCTCT 59.921 52.381 3.43 0.00 45.32 3.10
6 7 1.484240 CTGTGGATGGGTCCTTCTCTC 59.516 57.143 3.43 0.00 45.32 3.20
37 38 2.046023 CGCCACCAGCAGGATTGA 60.046 61.111 0.35 0.00 44.04 2.57
40 41 4.790962 CAGCGCCACCAGCAGGAT 62.791 66.667 2.29 0.00 44.04 3.24
83 84 5.354513 TGTTGTTCGTGAAGATGTTTACCAA 59.645 36.000 0.00 0.00 0.00 3.67
98 99 8.154203 TGACATTATATATGGGATGTTGTTCGT 58.846 33.333 10.59 0.00 33.21 3.85
99 100 8.443160 GTGACATTATATATGGGATGTTGTTCG 58.557 37.037 10.59 0.00 33.21 3.95
101 102 8.154203 TCGTGACATTATATATGGGATGTTGTT 58.846 33.333 10.59 0.00 33.21 2.83
102 103 7.676004 TCGTGACATTATATATGGGATGTTGT 58.324 34.615 10.59 0.00 33.21 3.32
103 104 8.722480 ATCGTGACATTATATATGGGATGTTG 57.278 34.615 10.59 6.50 33.21 3.33
126 127 7.434602 GGTTCGTAGGAGTATGTGAAAGTAATC 59.565 40.741 0.00 0.00 0.00 1.75
130 131 4.081807 GGGTTCGTAGGAGTATGTGAAAGT 60.082 45.833 0.00 0.00 0.00 2.66
145 146 6.438425 AGGACTCAGTTTATTTAGGGTTCGTA 59.562 38.462 0.00 0.00 0.00 3.43
148 149 7.092979 ACCTAGGACTCAGTTTATTTAGGGTTC 60.093 40.741 17.98 0.00 32.60 3.62
162 165 4.873746 TGAACTTCAACCTAGGACTCAG 57.126 45.455 17.98 8.42 0.00 3.35
188 191 8.883731 CGTGTTCATCTTTGAAGTAATTCCTAT 58.116 33.333 0.00 0.00 42.41 2.57
194 197 7.307989 CCAAGACGTGTTCATCTTTGAAGTAAT 60.308 37.037 0.00 0.00 42.41 1.89
254 257 7.391833 GCAGCCCATTAAAAAGATACTAGCTAT 59.608 37.037 0.00 0.00 0.00 2.97
255 258 6.710744 GCAGCCCATTAAAAAGATACTAGCTA 59.289 38.462 0.00 0.00 0.00 3.32
256 259 5.532779 GCAGCCCATTAAAAAGATACTAGCT 59.467 40.000 0.00 0.00 0.00 3.32
257 260 5.278512 GGCAGCCCATTAAAAAGATACTAGC 60.279 44.000 0.00 0.00 0.00 3.42
258 261 5.241728 GGGCAGCCCATTAAAAAGATACTAG 59.758 44.000 27.33 0.00 44.65 2.57
259 262 5.137551 GGGCAGCCCATTAAAAAGATACTA 58.862 41.667 27.33 0.00 44.65 1.82
260 263 3.960755 GGGCAGCCCATTAAAAAGATACT 59.039 43.478 27.33 0.00 44.65 2.12
261 264 4.322080 GGGCAGCCCATTAAAAAGATAC 57.678 45.455 27.33 0.00 44.65 2.24
292 295 2.120232 CCGCGAGCAATAAGTAGACAG 58.880 52.381 8.23 0.00 0.00 3.51
295 298 2.292569 CCTACCGCGAGCAATAAGTAGA 59.707 50.000 8.23 0.00 31.00 2.59
300 303 0.529773 CTGCCTACCGCGAGCAATAA 60.530 55.000 8.23 0.00 42.08 1.40
327 330 1.481871 CGAACAGGCCCTTAGTAGGA 58.518 55.000 0.00 0.00 45.05 2.94
328 331 0.464452 CCGAACAGGCCCTTAGTAGG 59.536 60.000 0.00 0.00 41.60 3.18
347 350 2.270986 CCAGGAGTTGGGCAGTTGC 61.271 63.158 0.00 0.00 43.75 4.17
348 351 4.085876 CCAGGAGTTGGGCAGTTG 57.914 61.111 0.00 0.00 43.75 3.16
355 358 6.316499 CTGATTCAGAGAAACCAGGAGTTGG 61.316 48.000 8.00 0.00 42.68 3.77
356 359 4.645535 TGATTCAGAGAAACCAGGAGTTG 58.354 43.478 0.00 0.00 39.19 3.16
357 360 4.805609 GCTGATTCAGAGAAACCAGGAGTT 60.806 45.833 17.87 0.00 35.00 3.01
359 362 3.269178 GCTGATTCAGAGAAACCAGGAG 58.731 50.000 17.87 0.00 32.44 3.69
360 363 2.354103 CGCTGATTCAGAGAAACCAGGA 60.354 50.000 17.87 0.00 33.20 3.86
361 364 2.005451 CGCTGATTCAGAGAAACCAGG 58.995 52.381 17.87 0.00 33.20 4.45
363 366 1.339055 CCCGCTGATTCAGAGAAACCA 60.339 52.381 17.87 0.00 33.20 3.67
364 367 1.373570 CCCGCTGATTCAGAGAAACC 58.626 55.000 17.87 0.00 33.20 3.27
367 370 1.153568 CGCCCGCTGATTCAGAGAA 60.154 57.895 17.87 0.00 33.20 2.87
368 371 1.604147 TTCGCCCGCTGATTCAGAGA 61.604 55.000 17.87 5.24 33.20 3.10
369 372 1.150567 CTTCGCCCGCTGATTCAGAG 61.151 60.000 17.87 13.86 32.44 3.35
370 373 1.153568 CTTCGCCCGCTGATTCAGA 60.154 57.895 17.87 0.00 32.44 3.27
371 374 2.817423 GCTTCGCCCGCTGATTCAG 61.817 63.158 9.40 9.40 34.12 3.02
373 376 2.512515 AGCTTCGCCCGCTGATTC 60.513 61.111 0.00 0.00 36.15 2.52
381 384 4.388499 TTCGGTCCAGCTTCGCCC 62.388 66.667 0.00 0.00 0.00 6.13
382 385 3.119096 GTTCGGTCCAGCTTCGCC 61.119 66.667 0.00 0.00 0.00 5.54
383 386 2.357034 TGTTCGGTCCAGCTTCGC 60.357 61.111 0.00 0.00 0.00 4.70
384 387 1.738099 CCTGTTCGGTCCAGCTTCG 60.738 63.158 0.00 0.00 0.00 3.79
385 388 1.371558 ACCTGTTCGGTCCAGCTTC 59.628 57.895 0.00 0.00 44.93 3.86
386 389 3.563512 ACCTGTTCGGTCCAGCTT 58.436 55.556 0.00 0.00 44.93 3.74
394 397 2.266055 GGGAGCTGACCTGTTCGG 59.734 66.667 0.00 0.00 39.35 4.30
395 398 1.079543 CTGGGAGCTGACCTGTTCG 60.080 63.158 0.00 0.00 0.00 3.95
396 399 0.687354 TTCTGGGAGCTGACCTGTTC 59.313 55.000 0.00 0.00 0.00 3.18
397 400 0.689623 CTTCTGGGAGCTGACCTGTT 59.310 55.000 0.00 0.00 0.00 3.16
398 401 1.835927 GCTTCTGGGAGCTGACCTGT 61.836 60.000 0.00 0.00 39.57 4.00
399 402 1.078567 GCTTCTGGGAGCTGACCTG 60.079 63.158 0.00 0.00 39.57 4.00
400 403 3.397906 GCTTCTGGGAGCTGACCT 58.602 61.111 0.00 0.00 39.57 3.85
406 409 3.377933 GAAGCTAGCTTCTGGGAGC 57.622 57.895 38.57 19.36 46.38 4.70
414 417 4.343814 GTCTTAGATCTGGGAAGCTAGCTT 59.656 45.833 29.71 29.71 39.23 3.74
415 418 3.895041 GTCTTAGATCTGGGAAGCTAGCT 59.105 47.826 12.68 12.68 0.00 3.32
416 419 3.305064 CGTCTTAGATCTGGGAAGCTAGC 60.305 52.174 6.62 6.62 0.00 3.42
417 420 3.254657 CCGTCTTAGATCTGGGAAGCTAG 59.745 52.174 5.18 0.00 0.00 3.42
418 421 3.223435 CCGTCTTAGATCTGGGAAGCTA 58.777 50.000 5.18 0.00 0.00 3.32
419 422 2.035632 CCGTCTTAGATCTGGGAAGCT 58.964 52.381 5.18 0.00 0.00 3.74
420 423 1.069358 CCCGTCTTAGATCTGGGAAGC 59.931 57.143 9.07 0.20 42.77 3.86
421 424 2.362717 GACCCGTCTTAGATCTGGGAAG 59.637 54.545 19.42 9.33 42.77 3.46
422 425 2.385803 GACCCGTCTTAGATCTGGGAA 58.614 52.381 19.42 0.00 42.77 3.97
423 426 1.749635 CGACCCGTCTTAGATCTGGGA 60.750 57.143 19.42 8.41 42.77 4.37
424 427 0.669077 CGACCCGTCTTAGATCTGGG 59.331 60.000 12.50 12.50 45.70 4.45
425 428 1.390565 ACGACCCGTCTTAGATCTGG 58.609 55.000 5.18 0.00 33.69 3.86
426 429 3.204526 ACTACGACCCGTCTTAGATCTG 58.795 50.000 13.54 0.00 41.54 2.90
427 430 3.557228 ACTACGACCCGTCTTAGATCT 57.443 47.619 13.54 0.00 41.54 2.75
428 431 7.426929 TTTATACTACGACCCGTCTTAGATC 57.573 40.000 13.54 0.00 41.54 2.75
429 432 7.807977 TTTTATACTACGACCCGTCTTAGAT 57.192 36.000 13.54 6.85 41.54 1.98
430 433 7.336931 AGTTTTTATACTACGACCCGTCTTAGA 59.663 37.037 13.54 1.02 41.54 2.10
431 434 7.430502 CAGTTTTTATACTACGACCCGTCTTAG 59.569 40.741 6.78 6.78 41.54 2.18
432 435 7.250569 CAGTTTTTATACTACGACCCGTCTTA 58.749 38.462 0.00 0.00 41.54 2.10
433 436 6.095377 CAGTTTTTATACTACGACCCGTCTT 58.905 40.000 0.00 0.00 41.54 3.01
434 437 5.393461 CCAGTTTTTATACTACGACCCGTCT 60.393 44.000 0.00 0.00 41.54 4.18
435 438 4.800471 CCAGTTTTTATACTACGACCCGTC 59.200 45.833 0.00 0.00 41.54 4.79
436 439 4.381932 CCCAGTTTTTATACTACGACCCGT 60.382 45.833 0.00 0.00 44.35 5.28
437 440 4.114794 CCCAGTTTTTATACTACGACCCG 58.885 47.826 0.00 0.00 0.00 5.28
438 441 5.343307 TCCCAGTTTTTATACTACGACCC 57.657 43.478 0.00 0.00 0.00 4.46
439 442 4.807834 GCTCCCAGTTTTTATACTACGACC 59.192 45.833 0.00 0.00 0.00 4.79
440 443 4.501921 CGCTCCCAGTTTTTATACTACGAC 59.498 45.833 0.00 0.00 0.00 4.34
441 444 4.398988 TCGCTCCCAGTTTTTATACTACGA 59.601 41.667 0.00 0.00 0.00 3.43
442 445 4.675510 TCGCTCCCAGTTTTTATACTACG 58.324 43.478 0.00 0.00 0.00 3.51
443 446 5.519206 CACTCGCTCCCAGTTTTTATACTAC 59.481 44.000 0.00 0.00 0.00 2.73
444 447 5.186409 ACACTCGCTCCCAGTTTTTATACTA 59.814 40.000 0.00 0.00 0.00 1.82
445 448 4.020485 ACACTCGCTCCCAGTTTTTATACT 60.020 41.667 0.00 0.00 0.00 2.12
446 449 4.251268 ACACTCGCTCCCAGTTTTTATAC 58.749 43.478 0.00 0.00 0.00 1.47
447 450 4.546829 ACACTCGCTCCCAGTTTTTATA 57.453 40.909 0.00 0.00 0.00 0.98
448 451 3.418684 ACACTCGCTCCCAGTTTTTAT 57.581 42.857 0.00 0.00 0.00 1.40
449 452 2.922740 ACACTCGCTCCCAGTTTTTA 57.077 45.000 0.00 0.00 0.00 1.52
450 453 2.052782 AACACTCGCTCCCAGTTTTT 57.947 45.000 0.00 0.00 0.00 1.94
451 454 1.947456 GAAACACTCGCTCCCAGTTTT 59.053 47.619 0.00 0.00 33.04 2.43
452 455 1.134220 TGAAACACTCGCTCCCAGTTT 60.134 47.619 0.00 0.00 35.33 2.66
453 456 0.468226 TGAAACACTCGCTCCCAGTT 59.532 50.000 0.00 0.00 0.00 3.16
454 457 0.687354 ATGAAACACTCGCTCCCAGT 59.313 50.000 0.00 0.00 0.00 4.00
455 458 1.081892 CATGAAACACTCGCTCCCAG 58.918 55.000 0.00 0.00 0.00 4.45
456 459 0.321564 CCATGAAACACTCGCTCCCA 60.322 55.000 0.00 0.00 0.00 4.37
457 460 0.036388 TCCATGAAACACTCGCTCCC 60.036 55.000 0.00 0.00 0.00 4.30
458 461 1.936547 GATCCATGAAACACTCGCTCC 59.063 52.381 0.00 0.00 0.00 4.70
459 462 1.936547 GGATCCATGAAACACTCGCTC 59.063 52.381 6.95 0.00 0.00 5.03
460 463 1.407437 GGGATCCATGAAACACTCGCT 60.407 52.381 15.23 0.00 0.00 4.93
461 464 1.017387 GGGATCCATGAAACACTCGC 58.983 55.000 15.23 0.00 0.00 5.03
462 465 2.093500 TCTGGGATCCATGAAACACTCG 60.093 50.000 15.23 0.00 30.82 4.18
463 466 3.634397 TCTGGGATCCATGAAACACTC 57.366 47.619 15.23 0.00 30.82 3.51
464 467 4.387026 TTTCTGGGATCCATGAAACACT 57.613 40.909 20.54 0.00 31.21 3.55
465 468 4.201950 CGATTTCTGGGATCCATGAAACAC 60.202 45.833 24.35 20.37 35.36 3.32
466 469 3.947196 CGATTTCTGGGATCCATGAAACA 59.053 43.478 24.35 11.23 35.36 2.83
467 470 3.243201 GCGATTTCTGGGATCCATGAAAC 60.243 47.826 24.35 18.59 35.36 2.78
468 471 2.951642 GCGATTTCTGGGATCCATGAAA 59.048 45.455 24.19 24.19 36.20 2.69
469 472 2.092484 TGCGATTTCTGGGATCCATGAA 60.092 45.455 15.23 13.76 30.82 2.57
470 473 1.490069 TGCGATTTCTGGGATCCATGA 59.510 47.619 15.23 7.98 30.82 3.07
471 474 1.878088 CTGCGATTTCTGGGATCCATG 59.122 52.381 15.23 5.44 30.82 3.66
472 475 1.770658 TCTGCGATTTCTGGGATCCAT 59.229 47.619 15.23 0.00 30.82 3.41
473 476 1.203237 TCTGCGATTTCTGGGATCCA 58.797 50.000 15.23 0.00 0.00 3.41
474 477 2.216898 CTTCTGCGATTTCTGGGATCC 58.783 52.381 1.92 1.92 0.00 3.36
475 478 1.601430 GCTTCTGCGATTTCTGGGATC 59.399 52.381 0.00 0.00 0.00 3.36
476 479 1.211457 AGCTTCTGCGATTTCTGGGAT 59.789 47.619 0.00 0.00 45.42 3.85
477 480 0.615331 AGCTTCTGCGATTTCTGGGA 59.385 50.000 0.00 0.00 45.42 4.37
478 481 0.731417 CAGCTTCTGCGATTTCTGGG 59.269 55.000 0.00 0.00 45.42 4.45
479 482 0.731417 CCAGCTTCTGCGATTTCTGG 59.269 55.000 0.00 0.00 45.42 3.86
480 483 1.664659 CTCCAGCTTCTGCGATTTCTG 59.335 52.381 0.00 0.00 45.42 3.02
481 484 1.277557 ACTCCAGCTTCTGCGATTTCT 59.722 47.619 0.00 0.00 45.42 2.52
482 485 1.731720 ACTCCAGCTTCTGCGATTTC 58.268 50.000 0.00 0.00 45.42 2.17
483 486 2.079925 GAACTCCAGCTTCTGCGATTT 58.920 47.619 0.00 0.00 45.42 2.17
484 487 1.002430 TGAACTCCAGCTTCTGCGATT 59.998 47.619 0.00 0.00 45.42 3.34
485 488 0.610174 TGAACTCCAGCTTCTGCGAT 59.390 50.000 0.00 0.00 45.42 4.58
486 489 0.392706 TTGAACTCCAGCTTCTGCGA 59.607 50.000 0.00 0.00 45.42 5.10
487 490 0.795085 CTTGAACTCCAGCTTCTGCG 59.205 55.000 0.00 0.00 45.42 5.18
488 491 1.889545 ACTTGAACTCCAGCTTCTGC 58.110 50.000 0.00 0.00 40.05 4.26
489 492 6.566197 AAATAACTTGAACTCCAGCTTCTG 57.434 37.500 0.00 0.00 0.00 3.02
490 493 6.369065 CGTAAATAACTTGAACTCCAGCTTCT 59.631 38.462 0.00 0.00 0.00 2.85
491 494 6.402226 CCGTAAATAACTTGAACTCCAGCTTC 60.402 42.308 0.00 0.00 0.00 3.86
492 495 5.411669 CCGTAAATAACTTGAACTCCAGCTT 59.588 40.000 0.00 0.00 0.00 3.74
493 496 4.935808 CCGTAAATAACTTGAACTCCAGCT 59.064 41.667 0.00 0.00 0.00 4.24
494 497 4.436986 GCCGTAAATAACTTGAACTCCAGC 60.437 45.833 0.00 0.00 0.00 4.85
495 498 4.201685 CGCCGTAAATAACTTGAACTCCAG 60.202 45.833 0.00 0.00 0.00 3.86
496 499 3.680937 CGCCGTAAATAACTTGAACTCCA 59.319 43.478 0.00 0.00 0.00 3.86
497 500 3.928375 TCGCCGTAAATAACTTGAACTCC 59.072 43.478 0.00 0.00 0.00 3.85
498 501 4.492085 GCTCGCCGTAAATAACTTGAACTC 60.492 45.833 0.00 0.00 0.00 3.01
499 502 3.370061 GCTCGCCGTAAATAACTTGAACT 59.630 43.478 0.00 0.00 0.00 3.01
500 503 3.370061 AGCTCGCCGTAAATAACTTGAAC 59.630 43.478 0.00 0.00 0.00 3.18
501 504 3.369756 CAGCTCGCCGTAAATAACTTGAA 59.630 43.478 0.00 0.00 0.00 2.69
502 505 2.927477 CAGCTCGCCGTAAATAACTTGA 59.073 45.455 0.00 0.00 0.00 3.02
503 506 2.536928 GCAGCTCGCCGTAAATAACTTG 60.537 50.000 0.00 0.00 32.94 3.16
504 507 1.664151 GCAGCTCGCCGTAAATAACTT 59.336 47.619 0.00 0.00 32.94 2.66
505 508 1.287425 GCAGCTCGCCGTAAATAACT 58.713 50.000 0.00 0.00 32.94 2.24
506 509 3.800440 GCAGCTCGCCGTAAATAAC 57.200 52.632 0.00 0.00 32.94 1.89
517 520 1.815421 ATTTAGCGGTGGCAGCTCG 60.815 57.895 15.48 7.73 44.79 5.03
518 521 0.744414 TCATTTAGCGGTGGCAGCTC 60.744 55.000 15.48 6.87 44.79 4.09
520 523 0.525761 TTTCATTTAGCGGTGGCAGC 59.474 50.000 6.62 6.62 43.41 5.25
521 524 2.083774 TCTTTCATTTAGCGGTGGCAG 58.916 47.619 0.00 0.00 43.41 4.85
522 525 2.192664 TCTTTCATTTAGCGGTGGCA 57.807 45.000 0.00 0.00 43.41 4.92
523 526 3.569250 TTTCTTTCATTTAGCGGTGGC 57.431 42.857 0.00 0.00 40.37 5.01
524 527 3.911964 CGTTTTCTTTCATTTAGCGGTGG 59.088 43.478 0.00 0.00 0.00 4.61
525 528 3.360758 GCGTTTTCTTTCATTTAGCGGTG 59.639 43.478 0.00 0.00 0.00 4.94
526 529 3.252458 AGCGTTTTCTTTCATTTAGCGGT 59.748 39.130 0.00 0.00 0.00 5.68
527 530 3.821841 AGCGTTTTCTTTCATTTAGCGG 58.178 40.909 0.00 0.00 0.00 5.52
528 531 4.027991 CGAAGCGTTTTCTTTCATTTAGCG 59.972 41.667 0.00 0.00 0.00 4.26
529 532 4.909880 ACGAAGCGTTTTCTTTCATTTAGC 59.090 37.500 0.00 0.00 36.35 3.09
530 533 7.067116 TGTACGAAGCGTTTTCTTTCATTTAG 58.933 34.615 0.00 0.00 41.54 1.85
531 534 6.946165 TGTACGAAGCGTTTTCTTTCATTTA 58.054 32.000 0.00 0.00 41.54 1.40
532 535 5.812652 TGTACGAAGCGTTTTCTTTCATTT 58.187 33.333 0.00 0.00 41.54 2.32
533 536 5.412526 TGTACGAAGCGTTTTCTTTCATT 57.587 34.783 0.00 0.00 41.54 2.57
534 537 4.084013 CCTGTACGAAGCGTTTTCTTTCAT 60.084 41.667 0.00 0.00 41.54 2.57
535 538 3.246699 CCTGTACGAAGCGTTTTCTTTCA 59.753 43.478 0.00 0.00 41.54 2.69
536 539 3.363673 CCCTGTACGAAGCGTTTTCTTTC 60.364 47.826 0.00 0.00 41.54 2.62
537 540 2.546789 CCCTGTACGAAGCGTTTTCTTT 59.453 45.455 0.00 0.00 41.54 2.52
538 541 2.140717 CCCTGTACGAAGCGTTTTCTT 58.859 47.619 0.00 0.00 41.54 2.52
539 542 1.342174 TCCCTGTACGAAGCGTTTTCT 59.658 47.619 0.00 0.00 41.54 2.52
540 543 1.787012 TCCCTGTACGAAGCGTTTTC 58.213 50.000 0.00 0.00 41.54 2.29
541 544 2.140717 CTTCCCTGTACGAAGCGTTTT 58.859 47.619 0.00 0.00 41.54 2.43
542 545 1.342174 TCTTCCCTGTACGAAGCGTTT 59.658 47.619 0.00 0.00 41.54 3.60
543 546 0.963962 TCTTCCCTGTACGAAGCGTT 59.036 50.000 0.00 0.00 41.54 4.84
544 547 0.963962 TTCTTCCCTGTACGAAGCGT 59.036 50.000 4.60 0.00 44.35 5.07
545 548 2.295253 ATTCTTCCCTGTACGAAGCG 57.705 50.000 4.60 0.00 37.29 4.68
546 549 4.650754 TCTATTCTTCCCTGTACGAAGC 57.349 45.455 4.60 0.00 37.29 3.86
547 550 5.035443 CGTTCTATTCTTCCCTGTACGAAG 58.965 45.833 0.00 3.37 38.47 3.79
548 551 4.676196 GCGTTCTATTCTTCCCTGTACGAA 60.676 45.833 0.00 0.00 0.00 3.85
549 552 3.181493 GCGTTCTATTCTTCCCTGTACGA 60.181 47.826 0.00 0.00 0.00 3.43
550 553 3.114065 GCGTTCTATTCTTCCCTGTACG 58.886 50.000 0.00 0.00 0.00 3.67
551 554 4.113354 CTGCGTTCTATTCTTCCCTGTAC 58.887 47.826 0.00 0.00 0.00 2.90
552 555 3.430374 GCTGCGTTCTATTCTTCCCTGTA 60.430 47.826 0.00 0.00 0.00 2.74
553 556 2.678190 GCTGCGTTCTATTCTTCCCTGT 60.678 50.000 0.00 0.00 0.00 4.00
554 557 1.936547 GCTGCGTTCTATTCTTCCCTG 59.063 52.381 0.00 0.00 0.00 4.45
555 558 1.555075 TGCTGCGTTCTATTCTTCCCT 59.445 47.619 0.00 0.00 0.00 4.20
556 559 2.024176 TGCTGCGTTCTATTCTTCCC 57.976 50.000 0.00 0.00 0.00 3.97
557 560 3.003480 AGTTGCTGCGTTCTATTCTTCC 58.997 45.455 0.00 0.00 0.00 3.46
558 561 4.033014 GGTAGTTGCTGCGTTCTATTCTTC 59.967 45.833 0.00 0.00 0.00 2.87
559 562 3.933332 GGTAGTTGCTGCGTTCTATTCTT 59.067 43.478 0.00 0.00 0.00 2.52
560 563 3.195825 AGGTAGTTGCTGCGTTCTATTCT 59.804 43.478 0.00 0.00 0.00 2.40
561 564 3.522553 AGGTAGTTGCTGCGTTCTATTC 58.477 45.455 0.00 0.00 0.00 1.75
562 565 3.611766 AGGTAGTTGCTGCGTTCTATT 57.388 42.857 0.00 0.00 0.00 1.73
563 566 3.522553 GAAGGTAGTTGCTGCGTTCTAT 58.477 45.455 10.71 0.00 37.74 1.98
564 567 2.670229 CGAAGGTAGTTGCTGCGTTCTA 60.670 50.000 14.19 0.00 38.27 2.10
565 568 1.797025 GAAGGTAGTTGCTGCGTTCT 58.203 50.000 10.71 0.00 37.74 3.01
566 569 0.438830 CGAAGGTAGTTGCTGCGTTC 59.561 55.000 8.76 8.76 37.52 3.95
567 570 1.566018 GCGAAGGTAGTTGCTGCGTT 61.566 55.000 0.00 0.00 0.00 4.84
568 571 2.027625 GCGAAGGTAGTTGCTGCGT 61.028 57.895 0.00 0.00 0.00 5.24
569 572 1.687494 GAGCGAAGGTAGTTGCTGCG 61.687 60.000 0.00 0.00 39.88 5.18
570 573 1.362406 GGAGCGAAGGTAGTTGCTGC 61.362 60.000 0.00 0.00 39.88 5.25
571 574 0.741221 GGGAGCGAAGGTAGTTGCTG 60.741 60.000 0.00 0.00 39.88 4.41
572 575 0.905337 AGGGAGCGAAGGTAGTTGCT 60.905 55.000 0.00 0.00 39.88 3.91
573 576 0.822164 TAGGGAGCGAAGGTAGTTGC 59.178 55.000 0.00 0.00 39.88 4.17
574 577 2.232941 TGTTAGGGAGCGAAGGTAGTTG 59.767 50.000 0.00 0.00 39.88 3.16
575 578 2.496470 CTGTTAGGGAGCGAAGGTAGTT 59.504 50.000 0.00 0.00 39.88 2.24
576 579 2.100989 CTGTTAGGGAGCGAAGGTAGT 58.899 52.381 0.00 0.00 39.88 2.73
577 580 1.409427 CCTGTTAGGGAGCGAAGGTAG 59.591 57.143 0.00 0.00 39.88 3.18
578 581 1.481871 CCTGTTAGGGAGCGAAGGTA 58.518 55.000 0.00 0.00 39.88 3.08
579 582 1.900545 GCCTGTTAGGGAGCGAAGGT 61.901 60.000 0.00 0.00 36.93 3.50
580 583 1.153349 GCCTGTTAGGGAGCGAAGG 60.153 63.158 0.00 0.00 35.37 3.46
581 584 1.153349 GGCCTGTTAGGGAGCGAAG 60.153 63.158 0.00 0.00 35.37 3.79
582 585 1.899437 CTGGCCTGTTAGGGAGCGAA 61.899 60.000 3.32 0.00 35.37 4.70
583 586 2.284331 TGGCCTGTTAGGGAGCGA 60.284 61.111 3.32 0.00 35.37 4.93
584 587 1.899437 TTCTGGCCTGTTAGGGAGCG 61.899 60.000 3.32 0.00 35.37 5.03
585 588 0.548510 ATTCTGGCCTGTTAGGGAGC 59.451 55.000 3.32 0.00 35.37 4.70
586 589 1.202580 CGATTCTGGCCTGTTAGGGAG 60.203 57.143 3.32 0.00 35.37 4.30
587 590 0.830648 CGATTCTGGCCTGTTAGGGA 59.169 55.000 3.32 0.00 35.37 4.20
588 591 0.815615 GCGATTCTGGCCTGTTAGGG 60.816 60.000 3.32 0.00 35.37 3.53
589 592 0.179000 AGCGATTCTGGCCTGTTAGG 59.821 55.000 3.32 0.00 38.80 2.69
590 593 2.029838 AAGCGATTCTGGCCTGTTAG 57.970 50.000 3.32 0.00 0.00 2.34
591 594 3.620427 TTAAGCGATTCTGGCCTGTTA 57.380 42.857 3.32 0.00 0.00 2.41
592 595 2.489938 TTAAGCGATTCTGGCCTGTT 57.510 45.000 3.32 0.00 0.00 3.16
593 596 2.292267 CATTAAGCGATTCTGGCCTGT 58.708 47.619 3.32 0.00 0.00 4.00
594 597 1.605710 CCATTAAGCGATTCTGGCCTG 59.394 52.381 3.32 2.92 0.00 4.85
595 598 1.477558 CCCATTAAGCGATTCTGGCCT 60.478 52.381 3.32 0.00 0.00 5.19
596 599 0.954452 CCCATTAAGCGATTCTGGCC 59.046 55.000 8.93 0.00 0.00 5.36
597 600 0.312102 GCCCATTAAGCGATTCTGGC 59.688 55.000 8.93 4.87 0.00 4.85
598 601 0.954452 GGCCCATTAAGCGATTCTGG 59.046 55.000 7.72 7.72 0.00 3.86
599 602 1.605710 CTGGCCCATTAAGCGATTCTG 59.394 52.381 0.00 0.00 0.00 3.02
600 603 1.972872 CTGGCCCATTAAGCGATTCT 58.027 50.000 0.00 0.00 0.00 2.40
601 604 0.312102 GCTGGCCCATTAAGCGATTC 59.688 55.000 0.00 0.00 0.00 2.52
602 605 1.109323 GGCTGGCCCATTAAGCGATT 61.109 55.000 0.00 0.00 37.83 3.34
603 606 1.529244 GGCTGGCCCATTAAGCGAT 60.529 57.895 0.00 0.00 37.83 4.58
604 607 2.124320 GGCTGGCCCATTAAGCGA 60.124 61.111 0.00 0.00 37.83 4.93
605 608 3.585990 CGGCTGGCCCATTAAGCG 61.586 66.667 0.00 0.00 37.83 4.68
606 609 3.219198 CCGGCTGGCCCATTAAGC 61.219 66.667 0.00 0.77 36.17 3.09
623 626 0.179070 GCTAGTCTTGGGCTGGTAGC 60.179 60.000 0.00 0.00 41.46 3.58
624 627 0.103208 CGCTAGTCTTGGGCTGGTAG 59.897 60.000 0.00 0.00 0.00 3.18
625 628 0.323999 TCGCTAGTCTTGGGCTGGTA 60.324 55.000 0.00 0.00 0.00 3.25
626 629 1.192146 TTCGCTAGTCTTGGGCTGGT 61.192 55.000 0.00 0.00 0.00 4.00
627 630 0.741221 GTTCGCTAGTCTTGGGCTGG 60.741 60.000 0.00 0.00 0.00 4.85
628 631 0.247736 AGTTCGCTAGTCTTGGGCTG 59.752 55.000 0.00 0.00 0.00 4.85
629 632 0.247736 CAGTTCGCTAGTCTTGGGCT 59.752 55.000 0.00 0.00 0.00 5.19
630 633 0.741221 CCAGTTCGCTAGTCTTGGGC 60.741 60.000 0.00 0.00 0.00 5.36
631 634 0.108138 CCCAGTTCGCTAGTCTTGGG 60.108 60.000 5.82 5.82 0.00 4.12
632 635 0.895530 TCCCAGTTCGCTAGTCTTGG 59.104 55.000 0.00 0.00 0.00 3.61
633 636 2.428890 AGATCCCAGTTCGCTAGTCTTG 59.571 50.000 0.00 0.00 0.00 3.02
634 637 2.428890 CAGATCCCAGTTCGCTAGTCTT 59.571 50.000 0.00 0.00 0.00 3.01
635 638 2.028130 CAGATCCCAGTTCGCTAGTCT 58.972 52.381 0.00 0.00 0.00 3.24
636 639 1.751924 ACAGATCCCAGTTCGCTAGTC 59.248 52.381 0.00 0.00 0.00 2.59
637 640 1.478510 CACAGATCCCAGTTCGCTAGT 59.521 52.381 0.00 0.00 0.00 2.57
638 641 1.751351 TCACAGATCCCAGTTCGCTAG 59.249 52.381 0.00 0.00 0.00 3.42
639 642 1.847328 TCACAGATCCCAGTTCGCTA 58.153 50.000 0.00 0.00 0.00 4.26
640 643 0.976641 TTCACAGATCCCAGTTCGCT 59.023 50.000 0.00 0.00 0.00 4.93
641 644 2.029838 ATTCACAGATCCCAGTTCGC 57.970 50.000 0.00 0.00 0.00 4.70
642 645 3.620374 CAGAATTCACAGATCCCAGTTCG 59.380 47.826 8.44 0.00 0.00 3.95
643 646 4.583871 ACAGAATTCACAGATCCCAGTTC 58.416 43.478 8.44 0.00 0.00 3.01
644 647 4.647564 ACAGAATTCACAGATCCCAGTT 57.352 40.909 8.44 0.00 0.00 3.16
645 648 4.330250 CAACAGAATTCACAGATCCCAGT 58.670 43.478 8.44 0.00 0.00 4.00
646 649 3.128242 GCAACAGAATTCACAGATCCCAG 59.872 47.826 8.44 0.00 0.00 4.45
647 650 3.084039 GCAACAGAATTCACAGATCCCA 58.916 45.455 8.44 0.00 0.00 4.37
648 651 2.424956 GGCAACAGAATTCACAGATCCC 59.575 50.000 8.44 0.00 0.00 3.85
649 652 2.096496 CGGCAACAGAATTCACAGATCC 59.904 50.000 8.44 0.88 0.00 3.36
650 653 3.002791 TCGGCAACAGAATTCACAGATC 58.997 45.455 8.44 0.00 0.00 2.75
651 654 3.057969 TCGGCAACAGAATTCACAGAT 57.942 42.857 8.44 0.00 0.00 2.90
652 655 2.542020 TCGGCAACAGAATTCACAGA 57.458 45.000 8.44 0.00 0.00 3.41
653 656 2.662791 CGTTCGGCAACAGAATTCACAG 60.663 50.000 8.44 0.00 33.12 3.66
654 657 1.262950 CGTTCGGCAACAGAATTCACA 59.737 47.619 8.44 0.00 33.12 3.58
655 658 1.399727 CCGTTCGGCAACAGAATTCAC 60.400 52.381 8.44 0.00 33.12 3.18
656 659 0.871722 CCGTTCGGCAACAGAATTCA 59.128 50.000 8.44 0.00 33.12 2.57
657 660 0.872388 ACCGTTCGGCAACAGAATTC 59.128 50.000 11.32 0.00 33.12 2.17
658 661 1.314730 AACCGTTCGGCAACAGAATT 58.685 45.000 11.32 0.00 33.12 2.17
659 662 1.314730 AAACCGTTCGGCAACAGAAT 58.685 45.000 11.32 0.00 33.12 2.40
660 663 1.096416 AAAACCGTTCGGCAACAGAA 58.904 45.000 11.32 0.00 32.14 3.02
661 664 1.064357 GAAAAACCGTTCGGCAACAGA 59.936 47.619 11.32 0.00 32.14 3.41
662 665 1.064952 AGAAAAACCGTTCGGCAACAG 59.935 47.619 11.32 0.00 32.50 3.16
663 666 1.096416 AGAAAAACCGTTCGGCAACA 58.904 45.000 11.32 0.00 32.50 3.33
664 667 1.064357 TCAGAAAAACCGTTCGGCAAC 59.936 47.619 11.32 0.00 32.50 4.17
665 668 1.380524 TCAGAAAAACCGTTCGGCAA 58.619 45.000 11.32 0.00 32.50 4.52
666 669 1.533731 GATCAGAAAAACCGTTCGGCA 59.466 47.619 11.32 0.00 32.50 5.69
667 670 1.135774 GGATCAGAAAAACCGTTCGGC 60.136 52.381 11.32 0.00 32.50 5.54
668 671 2.095919 GTGGATCAGAAAAACCGTTCGG 60.096 50.000 9.81 9.81 32.50 4.30
669 672 2.806244 AGTGGATCAGAAAAACCGTTCG 59.194 45.455 0.00 0.00 32.50 3.95
670 673 6.496338 AATAGTGGATCAGAAAAACCGTTC 57.504 37.500 0.00 0.00 0.00 3.95
671 674 6.894339 AAATAGTGGATCAGAAAAACCGTT 57.106 33.333 0.00 0.00 0.00 4.44
672 675 6.348213 CGAAAATAGTGGATCAGAAAAACCGT 60.348 38.462 0.00 0.00 0.00 4.83
673 676 6.021596 CGAAAATAGTGGATCAGAAAAACCG 58.978 40.000 0.00 0.00 0.00 4.44
674 677 6.909909 ACGAAAATAGTGGATCAGAAAAACC 58.090 36.000 0.00 0.00 0.00 3.27
675 678 6.736853 CGACGAAAATAGTGGATCAGAAAAAC 59.263 38.462 0.00 0.00 0.00 2.43
676 679 6.128391 CCGACGAAAATAGTGGATCAGAAAAA 60.128 38.462 0.00 0.00 0.00 1.94
677 680 5.350365 CCGACGAAAATAGTGGATCAGAAAA 59.650 40.000 0.00 0.00 0.00 2.29
678 681 4.868171 CCGACGAAAATAGTGGATCAGAAA 59.132 41.667 0.00 0.00 0.00 2.52
679 682 4.430007 CCGACGAAAATAGTGGATCAGAA 58.570 43.478 0.00 0.00 0.00 3.02
680 683 3.181479 CCCGACGAAAATAGTGGATCAGA 60.181 47.826 0.00 0.00 0.00 3.27
681 684 3.123804 CCCGACGAAAATAGTGGATCAG 58.876 50.000 0.00 0.00 0.00 2.90
682 685 2.761767 TCCCGACGAAAATAGTGGATCA 59.238 45.455 0.00 0.00 0.00 2.92
683 686 3.447918 TCCCGACGAAAATAGTGGATC 57.552 47.619 0.00 0.00 0.00 3.36
684 687 3.793559 CTTCCCGACGAAAATAGTGGAT 58.206 45.455 0.00 0.00 0.00 3.41
685 688 2.675889 GCTTCCCGACGAAAATAGTGGA 60.676 50.000 0.00 0.00 0.00 4.02
686 689 1.664151 GCTTCCCGACGAAAATAGTGG 59.336 52.381 0.00 0.00 0.00 4.00
687 690 2.348666 CAGCTTCCCGACGAAAATAGTG 59.651 50.000 0.00 0.00 0.00 2.74
688 691 2.618053 CAGCTTCCCGACGAAAATAGT 58.382 47.619 0.00 0.00 0.00 2.12
689 692 1.933853 CCAGCTTCCCGACGAAAATAG 59.066 52.381 0.00 0.00 0.00 1.73
690 693 1.551430 TCCAGCTTCCCGACGAAAATA 59.449 47.619 0.00 0.00 0.00 1.40
691 694 0.323629 TCCAGCTTCCCGACGAAAAT 59.676 50.000 0.00 0.00 0.00 1.82
692 695 0.320421 CTCCAGCTTCCCGACGAAAA 60.320 55.000 0.00 0.00 0.00 2.29
693 696 1.292223 CTCCAGCTTCCCGACGAAA 59.708 57.895 0.00 0.00 0.00 3.46
694 697 2.646175 CCTCCAGCTTCCCGACGAA 61.646 63.158 0.00 0.00 0.00 3.85
695 698 3.068691 CCTCCAGCTTCCCGACGA 61.069 66.667 0.00 0.00 0.00 4.20
696 699 3.382832 ACCTCCAGCTTCCCGACG 61.383 66.667 0.00 0.00 0.00 5.12
697 700 2.232298 CTCACCTCCAGCTTCCCGAC 62.232 65.000 0.00 0.00 0.00 4.79
698 701 1.984570 CTCACCTCCAGCTTCCCGA 60.985 63.158 0.00 0.00 0.00 5.14
699 702 1.333636 ATCTCACCTCCAGCTTCCCG 61.334 60.000 0.00 0.00 0.00 5.14
700 703 0.467804 GATCTCACCTCCAGCTTCCC 59.532 60.000 0.00 0.00 0.00 3.97
701 704 0.103937 CGATCTCACCTCCAGCTTCC 59.896 60.000 0.00 0.00 0.00 3.46
702 705 1.066908 CTCGATCTCACCTCCAGCTTC 59.933 57.143 0.00 0.00 0.00 3.86
703 706 1.110442 CTCGATCTCACCTCCAGCTT 58.890 55.000 0.00 0.00 0.00 3.74
704 707 0.257328 TCTCGATCTCACCTCCAGCT 59.743 55.000 0.00 0.00 0.00 4.24
705 708 1.066908 CTTCTCGATCTCACCTCCAGC 59.933 57.143 0.00 0.00 0.00 4.85
706 709 1.066908 GCTTCTCGATCTCACCTCCAG 59.933 57.143 0.00 0.00 0.00 3.86
707 710 1.107114 GCTTCTCGATCTCACCTCCA 58.893 55.000 0.00 0.00 0.00 3.86
708 711 0.387565 GGCTTCTCGATCTCACCTCC 59.612 60.000 0.00 0.00 0.00 4.30
709 712 0.030101 CGGCTTCTCGATCTCACCTC 59.970 60.000 0.00 0.00 0.00 3.85
710 713 1.388065 CCGGCTTCTCGATCTCACCT 61.388 60.000 0.00 0.00 0.00 4.00
711 714 1.066587 CCGGCTTCTCGATCTCACC 59.933 63.158 0.00 0.00 0.00 4.02
712 715 0.671251 ATCCGGCTTCTCGATCTCAC 59.329 55.000 0.00 0.00 0.00 3.51
713 716 1.403814 AATCCGGCTTCTCGATCTCA 58.596 50.000 0.00 0.00 0.00 3.27
714 717 2.131183 CAAATCCGGCTTCTCGATCTC 58.869 52.381 0.00 0.00 0.00 2.75
715 718 1.757118 TCAAATCCGGCTTCTCGATCT 59.243 47.619 0.00 0.00 0.00 2.75
716 719 2.131183 CTCAAATCCGGCTTCTCGATC 58.869 52.381 0.00 0.00 0.00 3.69
717 720 1.202580 CCTCAAATCCGGCTTCTCGAT 60.203 52.381 0.00 0.00 0.00 3.59
718 721 0.175760 CCTCAAATCCGGCTTCTCGA 59.824 55.000 0.00 0.00 0.00 4.04
719 722 0.175760 TCCTCAAATCCGGCTTCTCG 59.824 55.000 0.00 0.00 0.00 4.04
720 723 2.629336 ATCCTCAAATCCGGCTTCTC 57.371 50.000 0.00 0.00 0.00 2.87
721 724 3.054065 AGAAATCCTCAAATCCGGCTTCT 60.054 43.478 0.00 0.00 0.00 2.85
722 725 3.065925 CAGAAATCCTCAAATCCGGCTTC 59.934 47.826 0.00 0.00 0.00 3.86
723 726 3.019564 CAGAAATCCTCAAATCCGGCTT 58.980 45.455 0.00 0.00 0.00 4.35
724 727 2.648059 CAGAAATCCTCAAATCCGGCT 58.352 47.619 0.00 0.00 0.00 5.52
725 728 1.678101 CCAGAAATCCTCAAATCCGGC 59.322 52.381 0.00 0.00 0.00 6.13
726 729 3.281727 TCCAGAAATCCTCAAATCCGG 57.718 47.619 0.00 0.00 0.00 5.14
727 730 3.065925 GCTTCCAGAAATCCTCAAATCCG 59.934 47.826 0.00 0.00 0.00 4.18
728 731 4.097589 CAGCTTCCAGAAATCCTCAAATCC 59.902 45.833 0.00 0.00 0.00 3.01
729 732 4.097589 CCAGCTTCCAGAAATCCTCAAATC 59.902 45.833 0.00 0.00 0.00 2.17
730 733 4.021916 CCAGCTTCCAGAAATCCTCAAAT 58.978 43.478 0.00 0.00 0.00 2.32
731 734 3.424703 CCAGCTTCCAGAAATCCTCAAA 58.575 45.455 0.00 0.00 0.00 2.69
732 735 2.291153 CCCAGCTTCCAGAAATCCTCAA 60.291 50.000 0.00 0.00 0.00 3.02
733 736 1.283029 CCCAGCTTCCAGAAATCCTCA 59.717 52.381 0.00 0.00 0.00 3.86
734 737 2.021208 GCCCAGCTTCCAGAAATCCTC 61.021 57.143 0.00 0.00 0.00 3.71
735 738 0.033699 GCCCAGCTTCCAGAAATCCT 60.034 55.000 0.00 0.00 0.00 3.24
736 739 0.323725 TGCCCAGCTTCCAGAAATCC 60.324 55.000 0.00 0.00 0.00 3.01
737 740 1.101331 CTGCCCAGCTTCCAGAAATC 58.899 55.000 0.00 0.00 0.00 2.17
738 741 0.407139 ACTGCCCAGCTTCCAGAAAT 59.593 50.000 10.95 0.00 0.00 2.17
739 742 0.185901 AACTGCCCAGCTTCCAGAAA 59.814 50.000 10.95 0.00 0.00 2.52
740 743 0.538057 CAACTGCCCAGCTTCCAGAA 60.538 55.000 10.95 0.00 0.00 3.02
741 744 1.073722 CAACTGCCCAGCTTCCAGA 59.926 57.895 10.95 0.00 0.00 3.86
742 745 2.633509 GCAACTGCCCAGCTTCCAG 61.634 63.158 4.04 4.04 34.31 3.86
743 746 2.598394 GCAACTGCCCAGCTTCCA 60.598 61.111 0.00 0.00 34.31 3.53
760 763 3.485463 TGATAATTAGGGCCTGTTCGG 57.515 47.619 18.53 0.00 0.00 4.30
761 764 5.334105 CGATTTGATAATTAGGGCCTGTTCG 60.334 44.000 18.53 5.44 0.00 3.95
762 765 5.531287 ACGATTTGATAATTAGGGCCTGTTC 59.469 40.000 18.53 6.21 0.00 3.18
763 766 5.299279 CACGATTTGATAATTAGGGCCTGTT 59.701 40.000 18.53 13.56 0.00 3.16
764 767 4.821805 CACGATTTGATAATTAGGGCCTGT 59.178 41.667 18.53 1.03 0.00 4.00
765 768 4.821805 ACACGATTTGATAATTAGGGCCTG 59.178 41.667 18.53 0.00 0.00 4.85
766 769 5.048846 ACACGATTTGATAATTAGGGCCT 57.951 39.130 12.58 12.58 0.00 5.19
767 770 4.215613 GGACACGATTTGATAATTAGGGCC 59.784 45.833 0.00 0.00 0.00 5.80
768 771 4.084013 CGGACACGATTTGATAATTAGGGC 60.084 45.833 0.00 0.00 44.60 5.19
769 772 4.084013 GCGGACACGATTTGATAATTAGGG 60.084 45.833 0.00 0.00 44.60 3.53
770 773 4.084013 GGCGGACACGATTTGATAATTAGG 60.084 45.833 0.00 0.00 44.60 2.69
771 774 4.084013 GGGCGGACACGATTTGATAATTAG 60.084 45.833 0.00 0.00 44.60 1.73
772 775 3.810941 GGGCGGACACGATTTGATAATTA 59.189 43.478 0.00 0.00 44.60 1.40
773 776 2.616842 GGGCGGACACGATTTGATAATT 59.383 45.455 0.00 0.00 44.60 1.40
774 777 2.218603 GGGCGGACACGATTTGATAAT 58.781 47.619 0.00 0.00 44.60 1.28
775 778 1.658994 GGGCGGACACGATTTGATAA 58.341 50.000 0.00 0.00 44.60 1.75
776 779 0.179067 GGGGCGGACACGATTTGATA 60.179 55.000 0.00 0.00 44.60 2.15
777 780 1.451387 GGGGCGGACACGATTTGAT 60.451 57.895 0.00 0.00 44.60 2.57
778 781 2.046700 GGGGCGGACACGATTTGA 60.047 61.111 0.00 0.00 44.60 2.69
779 782 3.496131 CGGGGCGGACACGATTTG 61.496 66.667 0.00 0.00 44.60 2.32
835 838 0.798776 CGACTGGCAGCAAAGGTAAG 59.201 55.000 15.89 0.00 0.00 2.34
836 839 0.107831 ACGACTGGCAGCAAAGGTAA 59.892 50.000 15.89 0.00 0.00 2.85
842 845 1.891919 GTTGGACGACTGGCAGCAA 60.892 57.895 15.89 7.42 0.00 3.91
843 846 2.280797 GTTGGACGACTGGCAGCA 60.281 61.111 15.89 0.32 0.00 4.41
954 957 1.871039 GTGCCAAAGTTCGTCTTGCTA 59.129 47.619 0.00 0.00 36.40 3.49
960 1001 1.390463 GATCTCGTGCCAAAGTTCGTC 59.610 52.381 0.00 0.00 0.00 4.20
1092 1141 1.610038 TCGTAGGCGTCAGTGAAGAAA 59.390 47.619 10.48 0.00 39.49 2.52
1314 1365 0.251354 AGCAGACGACCATGAGCATT 59.749 50.000 0.00 0.00 0.00 3.56
1404 1455 2.283101 ATGCCAAAGCCGAGCCAA 60.283 55.556 0.00 0.00 38.69 4.52
1674 1725 3.129502 TAGTACGTGAGCGCCGCT 61.130 61.111 13.40 13.40 43.88 5.52
1696 1747 0.173708 GTCTCCGGCATCTTCGTTCT 59.826 55.000 0.00 0.00 0.00 3.01
1854 1923 2.279985 TTGGCAAACCGCGACGTA 60.280 55.556 8.23 0.00 43.84 3.57
1923 1992 0.956902 TCTGGCTGTAGTACGCGACA 60.957 55.000 15.93 5.48 0.00 4.35
2175 2244 1.661480 CGTCGTCCAGTGGTGGTAA 59.339 57.895 9.54 0.00 45.28 2.85
2687 2762 5.472148 TGTATACACCTACACAAAGTTCCG 58.528 41.667 0.08 0.00 0.00 4.30
2688 2763 6.461640 ACTGTATACACCTACACAAAGTTCC 58.538 40.000 0.08 0.00 0.00 3.62
2697 2772 9.999660 TGACAAAATTTACTGTATACACCTACA 57.000 29.630 0.08 0.00 0.00 2.74
2743 2818 6.128526 GGCTAAGATCAAGCGTAATATCAACC 60.129 42.308 12.37 0.00 41.03 3.77
2791 2866 9.354673 TCTTGATGTTTCCTTTCTCTAACAAAT 57.645 29.630 0.00 0.00 34.54 2.32
2809 2884 8.006298 AGTCGAGAGATCTAAAATCTTGATGT 57.994 34.615 0.00 0.00 45.19 3.06
2911 2986 6.414408 AATGACAGTTCAATCATTCGACTC 57.586 37.500 0.00 0.00 40.72 3.36
2919 2994 5.220397 GCGATCGTTAATGACAGTTCAATCA 60.220 40.000 17.81 0.00 34.61 2.57
2943 3018 1.212616 GGAACCGATGCATCTTCTCG 58.787 55.000 23.73 12.18 0.00 4.04
2980 3055 0.813184 CGCTTCCATCTGCAAACCAT 59.187 50.000 0.00 0.00 0.00 3.55
2982 3057 1.153958 GCGCTTCCATCTGCAAACC 60.154 57.895 0.00 0.00 0.00 3.27
2989 3064 1.448540 CCGTTGAGCGCTTCCATCT 60.449 57.895 13.26 0.00 39.71 2.90
3001 3076 2.203422 CCCTTGCCCAACCGTTGA 60.203 61.111 13.04 0.00 0.00 3.18
3432 3603 7.290061 TGCTGATTTATTTACCAAGCCTCTAT 58.710 34.615 0.00 0.00 0.00 1.98
3433 3604 6.658849 TGCTGATTTATTTACCAAGCCTCTA 58.341 36.000 0.00 0.00 0.00 2.43
3434 3605 5.509498 TGCTGATTTATTTACCAAGCCTCT 58.491 37.500 0.00 0.00 0.00 3.69
3435 3606 5.835113 TGCTGATTTATTTACCAAGCCTC 57.165 39.130 0.00 0.00 0.00 4.70
3436 3607 5.951747 TCTTGCTGATTTATTTACCAAGCCT 59.048 36.000 0.00 0.00 0.00 4.58
3437 3608 6.207691 TCTTGCTGATTTATTTACCAAGCC 57.792 37.500 0.00 0.00 0.00 4.35
3438 3609 7.761249 ACAATCTTGCTGATTTATTTACCAAGC 59.239 33.333 3.39 0.00 43.00 4.01
3439 3610 9.643693 AACAATCTTGCTGATTTATTTACCAAG 57.356 29.630 3.39 0.00 43.00 3.61
3440 3611 9.421806 CAACAATCTTGCTGATTTATTTACCAA 57.578 29.630 3.39 0.00 43.00 3.67
3441 3612 7.545265 GCAACAATCTTGCTGATTTATTTACCA 59.455 33.333 3.39 0.00 43.00 3.25
3487 3658 7.284919 TCTTCAGAAAAGTGGGGAAATAAAC 57.715 36.000 0.00 0.00 0.00 2.01
3517 3688 6.243148 TGTATTTCTCCTAAGTGGGTTTTCC 58.757 40.000 0.00 0.00 39.75 3.13
3518 3689 7.939784 ATGTATTTCTCCTAAGTGGGTTTTC 57.060 36.000 0.00 0.00 36.20 2.29
3523 3694 8.265055 TCACTAAATGTATTTCTCCTAAGTGGG 58.735 37.037 12.26 0.00 33.23 4.61
3546 3717 8.320396 ACATGATACATCAAGAGCAATATCAC 57.680 34.615 0.00 0.00 40.69 3.06
3553 3724 4.701171 TGCAAACATGATACATCAAGAGCA 59.299 37.500 0.00 5.90 40.69 4.26
3554 3725 5.239359 TGCAAACATGATACATCAAGAGC 57.761 39.130 0.00 3.82 40.69 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.