Multiple sequence alignment - TraesCS4B01G314500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G314500 chr4B 100.000 2222 0 0 1 2222 604142984 604145205 0.000000e+00 4104
1 TraesCS4B01G314500 chr4B 96.491 1539 53 1 1 1539 85985496 85987033 0.000000e+00 2542
2 TraesCS4B01G314500 chr4B 95.571 429 19 0 1539 1967 604144093 604144521 0.000000e+00 688
3 TraesCS4B01G314500 chr3A 98.475 1967 30 0 1 1967 684743940 684745906 0.000000e+00 3467
4 TraesCS4B01G314500 chr3A 96.494 1540 53 1 1 1540 459623246 459621708 0.000000e+00 2543
5 TraesCS4B01G314500 chr3A 96.181 1545 55 3 1 1541 11599033 11597489 0.000000e+00 2523
6 TraesCS4B01G314500 chr3A 96.181 1545 55 3 1 1541 11605921 11604377 0.000000e+00 2523
7 TraesCS4B01G314500 chr3A 92.233 103 7 1 2121 2222 1759686 1759788 6.390000e-31 145
8 TraesCS4B01G314500 chr3A 86.992 123 10 5 2105 2222 737183720 737183599 1.380000e-27 134
9 TraesCS4B01G314500 chr6A 97.611 1967 47 0 1 1967 531392489 531390523 0.000000e+00 3373
10 TraesCS4B01G314500 chr2A 97.514 1971 45 2 1 1971 48258089 48260055 0.000000e+00 3365
11 TraesCS4B01G314500 chr2A 96.715 1948 58 3 1 1948 765851481 765849540 0.000000e+00 3238
12 TraesCS4B01G314500 chr2A 95.581 430 18 1 1539 1968 38299912 38300340 0.000000e+00 688
13 TraesCS4B01G314500 chr5A 95.917 1543 61 1 1 1541 23905550 23904008 0.000000e+00 2499
14 TraesCS4B01G314500 chr5A 92.308 104 6 2 2120 2222 693314770 693314872 1.780000e-31 147
15 TraesCS4B01G314500 chr6B 96.037 429 17 0 1539 1967 317213270 317212842 0.000000e+00 699
16 TraesCS4B01G314500 chr6B 95.652 92 4 0 2131 2222 48412072 48412163 4.940000e-32 148
17 TraesCS4B01G314500 chr6B 92.157 102 7 1 2121 2222 720611752 720611852 2.300000e-30 143
18 TraesCS4B01G314500 chr3B 95.592 431 19 0 1537 1967 572677095 572677525 0.000000e+00 691
19 TraesCS4B01G314500 chr3B 91.589 107 7 2 2117 2222 792986273 792986168 1.780000e-31 147
20 TraesCS4B01G314500 chr5B 95.581 430 18 1 1539 1967 492815826 492815397 0.000000e+00 688
21 TraesCS4B01G314500 chr4D 92.199 141 7 3 1969 2105 477914755 477914895 1.740000e-46 196
22 TraesCS4B01G314500 chr1A 97.753 89 2 0 2134 2222 328253584 328253672 1.060000e-33 154
23 TraesCS4B01G314500 chr7A 91.304 115 5 5 2110 2222 50348625 50348514 3.820000e-33 152
24 TraesCS4B01G314500 chr1B 94.681 94 5 0 2129 2222 520523746 520523839 1.780000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G314500 chr4B 604142984 604145205 2221 False 2396 4104 97.7855 1 2222 2 chr4B.!!$F2 2221
1 TraesCS4B01G314500 chr4B 85985496 85987033 1537 False 2542 2542 96.4910 1 1539 1 chr4B.!!$F1 1538
2 TraesCS4B01G314500 chr3A 684743940 684745906 1966 False 3467 3467 98.4750 1 1967 1 chr3A.!!$F2 1966
3 TraesCS4B01G314500 chr3A 459621708 459623246 1538 True 2543 2543 96.4940 1 1540 1 chr3A.!!$R3 1539
4 TraesCS4B01G314500 chr3A 11597489 11599033 1544 True 2523 2523 96.1810 1 1541 1 chr3A.!!$R1 1540
5 TraesCS4B01G314500 chr3A 11604377 11605921 1544 True 2523 2523 96.1810 1 1541 1 chr3A.!!$R2 1540
6 TraesCS4B01G314500 chr6A 531390523 531392489 1966 True 3373 3373 97.6110 1 1967 1 chr6A.!!$R1 1966
7 TraesCS4B01G314500 chr2A 48258089 48260055 1966 False 3365 3365 97.5140 1 1971 1 chr2A.!!$F2 1970
8 TraesCS4B01G314500 chr2A 765849540 765851481 1941 True 3238 3238 96.7150 1 1948 1 chr2A.!!$R1 1947
9 TraesCS4B01G314500 chr5A 23904008 23905550 1542 True 2499 2499 95.9170 1 1541 1 chr5A.!!$R1 1540

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
882 889 5.301805 CGGCAACCTAAGATAATCCCAAATT 59.698 40.0 0.0 0.0 0.0 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1758 2195 0.179059 TGAAACTCCACGCTTGAGCA 60.179 50.0 3.65 0.0 42.21 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
267 270 7.067494 CGGATTAGTTTCTTCATTGGATCCTTT 59.933 37.037 14.23 0.00 0.00 3.11
481 484 7.150640 TGCTGTGCAATTATGTTAAAATGACA 58.849 30.769 0.00 0.00 34.76 3.58
751 754 8.772250 TGAGAAGTAATCATGGGAAATAGACTT 58.228 33.333 0.00 0.00 0.00 3.01
882 889 5.301805 CGGCAACCTAAGATAATCCCAAATT 59.698 40.000 0.00 0.00 0.00 1.82
1261 1698 7.461749 TGGATTTGTCTGAGATTAGTTTCCTT 58.538 34.615 0.00 0.00 0.00 3.36
1383 1820 2.607187 GTGGAGTACGGTCAGTCAATG 58.393 52.381 0.00 0.00 0.00 2.82
1384 1821 2.029290 GTGGAGTACGGTCAGTCAATGT 60.029 50.000 0.00 0.00 0.00 2.71
1385 1822 3.192001 GTGGAGTACGGTCAGTCAATGTA 59.808 47.826 0.00 0.00 0.00 2.29
1386 1823 3.827876 TGGAGTACGGTCAGTCAATGTAA 59.172 43.478 0.00 0.00 0.00 2.41
1387 1824 4.281435 TGGAGTACGGTCAGTCAATGTAAA 59.719 41.667 0.00 0.00 0.00 2.01
1388 1825 5.046878 TGGAGTACGGTCAGTCAATGTAAAT 60.047 40.000 0.00 0.00 0.00 1.40
1389 1826 5.873164 GGAGTACGGTCAGTCAATGTAAATT 59.127 40.000 0.00 0.00 0.00 1.82
1390 1827 6.183360 GGAGTACGGTCAGTCAATGTAAATTG 60.183 42.308 0.00 0.00 0.00 2.32
1391 1828 4.419522 ACGGTCAGTCAATGTAAATTGC 57.580 40.909 0.22 0.00 0.00 3.56
1392 1829 4.072131 ACGGTCAGTCAATGTAAATTGCT 58.928 39.130 0.22 0.00 0.00 3.91
1393 1830 5.242434 ACGGTCAGTCAATGTAAATTGCTA 58.758 37.500 0.22 0.00 0.00 3.49
1394 1831 5.703592 ACGGTCAGTCAATGTAAATTGCTAA 59.296 36.000 0.22 0.00 0.00 3.09
1395 1832 6.128282 ACGGTCAGTCAATGTAAATTGCTAAG 60.128 38.462 0.22 0.00 0.00 2.18
1396 1833 6.128282 CGGTCAGTCAATGTAAATTGCTAAGT 60.128 38.462 0.22 0.00 0.00 2.24
1397 1834 7.023575 GGTCAGTCAATGTAAATTGCTAAGTG 58.976 38.462 0.22 0.00 0.00 3.16
1398 1835 6.524586 GTCAGTCAATGTAAATTGCTAAGTGC 59.475 38.462 0.22 0.00 43.25 4.40
1411 1848 4.488126 GCTAAGTGCACACAGAAAATGA 57.512 40.909 21.04 0.00 42.31 2.57
1412 1849 5.051891 GCTAAGTGCACACAGAAAATGAT 57.948 39.130 21.04 0.00 42.31 2.45
1413 1850 5.464168 GCTAAGTGCACACAGAAAATGATT 58.536 37.500 21.04 2.09 42.31 2.57
1414 1851 5.922544 GCTAAGTGCACACAGAAAATGATTT 59.077 36.000 21.04 1.88 42.31 2.17
1415 1852 7.083858 GCTAAGTGCACACAGAAAATGATTTA 58.916 34.615 21.04 3.04 42.31 1.40
1416 1853 7.272084 GCTAAGTGCACACAGAAAATGATTTAG 59.728 37.037 21.04 13.34 42.31 1.85
1417 1854 6.017400 AGTGCACACAGAAAATGATTTAGG 57.983 37.500 21.04 0.00 0.00 2.69
1418 1855 5.536161 AGTGCACACAGAAAATGATTTAGGT 59.464 36.000 21.04 0.00 0.00 3.08
1419 1856 6.040842 AGTGCACACAGAAAATGATTTAGGTT 59.959 34.615 21.04 0.00 0.00 3.50
1420 1857 7.230510 AGTGCACACAGAAAATGATTTAGGTTA 59.769 33.333 21.04 0.00 0.00 2.85
1421 1858 7.865385 GTGCACACAGAAAATGATTTAGGTTAA 59.135 33.333 13.17 0.00 0.00 2.01
1422 1859 8.081633 TGCACACAGAAAATGATTTAGGTTAAG 58.918 33.333 0.00 0.00 0.00 1.85
1423 1860 7.542130 GCACACAGAAAATGATTTAGGTTAAGG 59.458 37.037 0.00 0.00 0.00 2.69
1424 1861 7.542130 CACACAGAAAATGATTTAGGTTAAGGC 59.458 37.037 0.00 0.00 0.00 4.35
1425 1862 7.451566 ACACAGAAAATGATTTAGGTTAAGGCT 59.548 33.333 0.00 0.00 0.00 4.58
1426 1863 8.956426 CACAGAAAATGATTTAGGTTAAGGCTA 58.044 33.333 0.00 0.00 0.00 3.93
1427 1864 9.528489 ACAGAAAATGATTTAGGTTAAGGCTAA 57.472 29.630 0.00 0.00 0.00 3.09
1428 1865 9.788960 CAGAAAATGATTTAGGTTAAGGCTAAC 57.211 33.333 0.00 0.00 37.30 2.34
1439 1876 5.850614 GGTTAAGGCTAACCGATAGATTGA 58.149 41.667 9.20 0.00 45.91 2.57
1440 1877 6.465084 GGTTAAGGCTAACCGATAGATTGAT 58.535 40.000 9.20 0.00 45.91 2.57
1441 1878 6.935208 GGTTAAGGCTAACCGATAGATTGATT 59.065 38.462 9.20 0.00 45.91 2.57
1442 1879 7.444487 GGTTAAGGCTAACCGATAGATTGATTT 59.556 37.037 9.20 0.00 45.91 2.17
1443 1880 8.837389 GTTAAGGCTAACCGATAGATTGATTTT 58.163 33.333 0.00 0.00 42.76 1.82
1445 1882 8.608844 AAGGCTAACCGATAGATTGATTTTAG 57.391 34.615 0.00 0.00 42.76 1.85
1446 1883 7.736893 AGGCTAACCGATAGATTGATTTTAGT 58.263 34.615 0.00 0.00 42.76 2.24
1447 1884 7.657761 AGGCTAACCGATAGATTGATTTTAGTG 59.342 37.037 0.00 0.00 42.76 2.74
1448 1885 7.095187 GGCTAACCGATAGATTGATTTTAGTGG 60.095 40.741 0.06 0.00 39.76 4.00
1449 1886 7.095187 GCTAACCGATAGATTGATTTTAGTGGG 60.095 40.741 0.06 0.00 39.76 4.61
1450 1887 5.063880 ACCGATAGATTGATTTTAGTGGGC 58.936 41.667 0.00 0.00 39.76 5.36
1451 1888 4.455877 CCGATAGATTGATTTTAGTGGGCC 59.544 45.833 0.00 0.00 39.76 5.80
1452 1889 5.308825 CGATAGATTGATTTTAGTGGGCCT 58.691 41.667 4.53 0.00 39.76 5.19
1453 1890 6.464222 CGATAGATTGATTTTAGTGGGCCTA 58.536 40.000 4.53 0.00 39.76 3.93
1454 1891 6.934645 CGATAGATTGATTTTAGTGGGCCTAA 59.065 38.462 4.53 0.00 39.76 2.69
1455 1892 7.607991 CGATAGATTGATTTTAGTGGGCCTAAT 59.392 37.037 4.53 0.00 34.92 1.73
1456 1893 8.870075 ATAGATTGATTTTAGTGGGCCTAATC 57.130 34.615 4.53 6.97 35.59 1.75
1457 1894 5.765182 AGATTGATTTTAGTGGGCCTAATCG 59.235 40.000 4.53 0.00 35.59 3.34
1458 1895 4.497291 TGATTTTAGTGGGCCTAATCGT 57.503 40.909 4.53 0.00 35.59 3.73
1459 1896 4.196193 TGATTTTAGTGGGCCTAATCGTG 58.804 43.478 4.53 0.00 35.59 4.35
1460 1897 2.032680 TTTAGTGGGCCTAATCGTGC 57.967 50.000 4.53 0.00 35.59 5.34
1461 1898 0.179094 TTAGTGGGCCTAATCGTGCG 60.179 55.000 4.53 0.00 30.55 5.34
1462 1899 2.023414 TAGTGGGCCTAATCGTGCGG 62.023 60.000 4.53 0.00 0.00 5.69
1463 1900 3.395702 TGGGCCTAATCGTGCGGT 61.396 61.111 4.53 0.00 0.00 5.68
1464 1901 2.895372 GGGCCTAATCGTGCGGTG 60.895 66.667 0.84 0.00 0.00 4.94
1465 1902 2.895372 GGCCTAATCGTGCGGTGG 60.895 66.667 0.00 0.00 0.00 4.61
1466 1903 2.125269 GCCTAATCGTGCGGTGGT 60.125 61.111 0.00 0.00 0.00 4.16
1467 1904 1.142314 GCCTAATCGTGCGGTGGTA 59.858 57.895 0.00 0.00 0.00 3.25
1468 1905 0.249741 GCCTAATCGTGCGGTGGTAT 60.250 55.000 0.00 0.00 0.00 2.73
1469 1906 1.808891 GCCTAATCGTGCGGTGGTATT 60.809 52.381 0.00 0.00 0.00 1.89
1470 1907 1.864711 CCTAATCGTGCGGTGGTATTG 59.135 52.381 0.00 0.00 0.00 1.90
1471 1908 1.864711 CTAATCGTGCGGTGGTATTGG 59.135 52.381 0.00 0.00 0.00 3.16
1472 1909 0.250793 AATCGTGCGGTGGTATTGGA 59.749 50.000 0.00 0.00 0.00 3.53
1473 1910 0.468226 ATCGTGCGGTGGTATTGGAT 59.532 50.000 0.00 0.00 0.00 3.41
1474 1911 0.179094 TCGTGCGGTGGTATTGGATC 60.179 55.000 0.00 0.00 0.00 3.36
1475 1912 0.179084 CGTGCGGTGGTATTGGATCT 60.179 55.000 0.00 0.00 0.00 2.75
1476 1913 1.299541 GTGCGGTGGTATTGGATCTG 58.700 55.000 0.00 0.00 0.00 2.90
1477 1914 0.908910 TGCGGTGGTATTGGATCTGT 59.091 50.000 0.00 0.00 0.00 3.41
1478 1915 1.299541 GCGGTGGTATTGGATCTGTG 58.700 55.000 0.00 0.00 0.00 3.66
1479 1916 1.406887 GCGGTGGTATTGGATCTGTGT 60.407 52.381 0.00 0.00 0.00 3.72
1480 1917 2.159014 GCGGTGGTATTGGATCTGTGTA 60.159 50.000 0.00 0.00 0.00 2.90
1481 1918 3.454375 CGGTGGTATTGGATCTGTGTAC 58.546 50.000 0.00 0.00 0.00 2.90
1482 1919 3.118920 CGGTGGTATTGGATCTGTGTACA 60.119 47.826 0.00 0.00 0.00 2.90
1483 1920 4.189231 GGTGGTATTGGATCTGTGTACAC 58.811 47.826 19.36 19.36 0.00 2.90
1484 1921 4.081087 GGTGGTATTGGATCTGTGTACACT 60.081 45.833 25.60 6.76 0.00 3.55
1485 1922 5.488341 GTGGTATTGGATCTGTGTACACTT 58.512 41.667 25.60 11.40 0.00 3.16
1486 1923 5.938125 GTGGTATTGGATCTGTGTACACTTT 59.062 40.000 25.60 11.06 0.00 2.66
1487 1924 5.937540 TGGTATTGGATCTGTGTACACTTTG 59.062 40.000 25.60 15.64 0.00 2.77
1488 1925 5.938125 GGTATTGGATCTGTGTACACTTTGT 59.062 40.000 25.60 10.03 0.00 2.83
1489 1926 5.947228 ATTGGATCTGTGTACACTTTGTG 57.053 39.130 25.60 11.22 39.75 3.33
1490 1927 3.738982 TGGATCTGTGTACACTTTGTGG 58.261 45.455 25.60 9.64 37.94 4.17
1491 1928 3.074412 GGATCTGTGTACACTTTGTGGG 58.926 50.000 25.60 8.13 37.94 4.61
1492 1929 2.631160 TCTGTGTACACTTTGTGGGG 57.369 50.000 25.60 6.92 37.94 4.96
1493 1930 1.841277 TCTGTGTACACTTTGTGGGGT 59.159 47.619 25.60 0.00 37.94 4.95
1494 1931 1.946768 CTGTGTACACTTTGTGGGGTG 59.053 52.381 25.60 0.00 37.94 4.61
1495 1932 1.282447 TGTGTACACTTTGTGGGGTGT 59.718 47.619 25.60 0.00 46.52 4.16
1496 1933 1.673920 GTGTACACTTTGTGGGGTGTG 59.326 52.381 18.92 0.00 44.86 3.82
1497 1934 0.666374 GTACACTTTGTGGGGTGTGC 59.334 55.000 8.68 4.11 44.86 4.57
1498 1935 0.548989 TACACTTTGTGGGGTGTGCT 59.451 50.000 8.68 0.00 44.86 4.40
1499 1936 0.324275 ACACTTTGTGGGGTGTGCTT 60.324 50.000 2.72 0.00 43.79 3.91
1500 1937 1.064314 ACACTTTGTGGGGTGTGCTTA 60.064 47.619 2.72 0.00 43.79 3.09
1501 1938 2.028130 CACTTTGTGGGGTGTGCTTAA 58.972 47.619 0.00 0.00 0.00 1.85
1502 1939 2.428890 CACTTTGTGGGGTGTGCTTAAA 59.571 45.455 0.00 0.00 0.00 1.52
1503 1940 3.100671 ACTTTGTGGGGTGTGCTTAAAA 58.899 40.909 0.00 0.00 0.00 1.52
1504 1941 3.515901 ACTTTGTGGGGTGTGCTTAAAAA 59.484 39.130 0.00 0.00 0.00 1.94
1550 1987 9.584008 AATAGTAGTATAGATGTTCCCGAAGAA 57.416 33.333 0.00 0.00 0.00 2.52
1551 1988 7.893124 AGTAGTATAGATGTTCCCGAAGAAA 57.107 36.000 0.00 0.00 35.85 2.52
1552 1989 7.942990 AGTAGTATAGATGTTCCCGAAGAAAG 58.057 38.462 0.00 0.00 35.85 2.62
1553 1990 7.778853 AGTAGTATAGATGTTCCCGAAGAAAGA 59.221 37.037 0.00 0.00 35.85 2.52
1554 1991 6.807789 AGTATAGATGTTCCCGAAGAAAGAC 58.192 40.000 0.00 0.00 35.85 3.01
1555 1992 2.960819 AGATGTTCCCGAAGAAAGACG 58.039 47.619 0.00 0.00 35.85 4.18
1556 1993 2.561419 AGATGTTCCCGAAGAAAGACGA 59.439 45.455 0.00 0.00 35.85 4.20
1557 1994 2.894763 TGTTCCCGAAGAAAGACGAA 57.105 45.000 0.00 0.00 35.85 3.85
1558 1995 2.750948 TGTTCCCGAAGAAAGACGAAG 58.249 47.619 0.00 0.00 35.85 3.79
1559 1996 1.459975 GTTCCCGAAGAAAGACGAAGC 59.540 52.381 0.00 0.00 35.85 3.86
1560 1997 0.966920 TCCCGAAGAAAGACGAAGCT 59.033 50.000 0.00 0.00 0.00 3.74
1561 1998 1.067776 TCCCGAAGAAAGACGAAGCTC 60.068 52.381 0.00 0.00 0.00 4.09
1562 1999 1.351153 CCGAAGAAAGACGAAGCTCC 58.649 55.000 0.00 0.00 0.00 4.70
1563 2000 1.067495 CCGAAGAAAGACGAAGCTCCT 60.067 52.381 0.00 0.00 0.00 3.69
1564 2001 2.255316 CGAAGAAAGACGAAGCTCCTC 58.745 52.381 0.00 0.00 0.00 3.71
1565 2002 2.255316 GAAGAAAGACGAAGCTCCTCG 58.745 52.381 6.27 6.27 44.50 4.63
1566 2003 0.109039 AGAAAGACGAAGCTCCTCGC 60.109 55.000 7.71 1.63 42.69 5.03
1567 2004 1.406970 GAAAGACGAAGCTCCTCGCG 61.407 60.000 7.71 0.00 45.59 5.87
1568 2005 3.973267 AAGACGAAGCTCCTCGCGC 62.973 63.158 7.71 0.00 45.59 6.86
1569 2006 4.484258 GACGAAGCTCCTCGCGCT 62.484 66.667 5.56 0.00 45.59 5.92
1573 2010 4.459089 AAGCTCCTCGCGCTTCCC 62.459 66.667 5.56 0.00 43.79 3.97
1578 2015 4.918201 CCTCGCGCTTCCCCCATC 62.918 72.222 5.56 0.00 0.00 3.51
1584 2021 4.115199 GCTTCCCCCATCGTGGCT 62.115 66.667 0.00 0.00 35.79 4.75
1585 2022 2.742116 GCTTCCCCCATCGTGGCTA 61.742 63.158 0.00 0.00 35.79 3.93
1586 2023 1.447643 CTTCCCCCATCGTGGCTAG 59.552 63.158 0.00 0.00 35.79 3.42
1587 2024 2.666596 CTTCCCCCATCGTGGCTAGC 62.667 65.000 6.04 6.04 35.79 3.42
1588 2025 4.609018 CCCCCATCGTGGCTAGCG 62.609 72.222 9.00 0.00 35.79 4.26
1589 2026 3.849951 CCCCATCGTGGCTAGCGT 61.850 66.667 9.00 0.00 35.79 5.07
1590 2027 2.586079 CCCATCGTGGCTAGCGTG 60.586 66.667 9.00 0.54 35.79 5.34
1591 2028 3.264897 CCATCGTGGCTAGCGTGC 61.265 66.667 9.00 0.03 0.00 5.34
1592 2029 2.509111 CATCGTGGCTAGCGTGCA 60.509 61.111 9.00 0.00 34.04 4.57
1593 2030 1.884464 CATCGTGGCTAGCGTGCAT 60.884 57.895 9.00 0.00 34.04 3.96
1594 2031 1.884464 ATCGTGGCTAGCGTGCATG 60.884 57.895 9.00 6.97 34.04 4.06
1595 2032 2.296814 ATCGTGGCTAGCGTGCATGA 62.297 55.000 10.93 14.30 34.04 3.07
1596 2033 1.884464 CGTGGCTAGCGTGCATGAT 60.884 57.895 10.93 5.86 34.04 2.45
1597 2034 1.645455 GTGGCTAGCGTGCATGATG 59.355 57.895 10.93 0.00 34.04 3.07
1598 2035 1.524393 TGGCTAGCGTGCATGATGG 60.524 57.895 10.93 6.64 34.04 3.51
1599 2036 2.635899 GCTAGCGTGCATGATGGC 59.364 61.111 16.86 16.86 0.00 4.40
1600 2037 2.933666 CTAGCGTGCATGATGGCG 59.066 61.111 10.93 0.00 36.28 5.69
1601 2038 2.588596 TAGCGTGCATGATGGCGG 60.589 61.111 10.93 0.00 36.28 6.13
1604 2041 4.246206 CGTGCATGATGGCGGCAG 62.246 66.667 19.29 4.49 38.38 4.85
1605 2042 3.896133 GTGCATGATGGCGGCAGG 61.896 66.667 19.29 8.06 38.38 4.85
1618 2055 4.752879 GCAGGCGGCTCACGGTTA 62.753 66.667 9.32 0.00 44.51 2.85
1619 2056 2.509336 CAGGCGGCTCACGGTTAG 60.509 66.667 9.32 0.00 44.51 2.34
1620 2057 4.452733 AGGCGGCTCACGGTTAGC 62.453 66.667 5.25 5.76 44.51 3.09
1621 2058 4.452733 GGCGGCTCACGGTTAGCT 62.453 66.667 13.48 0.00 44.51 3.32
1622 2059 2.434359 GCGGCTCACGGTTAGCTT 60.434 61.111 13.48 0.00 44.51 3.74
1623 2060 2.453638 GCGGCTCACGGTTAGCTTC 61.454 63.158 13.48 3.11 44.51 3.86
1624 2061 1.810030 CGGCTCACGGTTAGCTTCC 60.810 63.158 13.48 0.00 39.97 3.46
1625 2062 1.597461 GGCTCACGGTTAGCTTCCT 59.403 57.895 13.48 0.00 39.97 3.36
1626 2063 0.822164 GGCTCACGGTTAGCTTCCTA 59.178 55.000 13.48 0.00 39.97 2.94
1627 2064 1.206371 GGCTCACGGTTAGCTTCCTAA 59.794 52.381 13.48 0.00 39.97 2.69
1628 2065 2.158943 GGCTCACGGTTAGCTTCCTAAT 60.159 50.000 13.48 0.00 39.97 1.73
1629 2066 3.069158 GGCTCACGGTTAGCTTCCTAATA 59.931 47.826 13.48 0.00 39.97 0.98
1630 2067 4.299978 GCTCACGGTTAGCTTCCTAATAG 58.700 47.826 7.05 0.00 36.06 1.73
1631 2068 4.796618 GCTCACGGTTAGCTTCCTAATAGG 60.797 50.000 7.05 0.00 36.06 2.57
1632 2069 4.539726 TCACGGTTAGCTTCCTAATAGGA 58.460 43.478 4.61 4.61 44.10 2.94
1633 2070 5.145564 TCACGGTTAGCTTCCTAATAGGAT 58.854 41.667 10.21 0.00 45.34 3.24
1634 2071 5.010719 TCACGGTTAGCTTCCTAATAGGATG 59.989 44.000 10.21 13.33 45.34 3.51
1635 2072 4.283722 ACGGTTAGCTTCCTAATAGGATGG 59.716 45.833 19.76 12.78 45.34 3.51
1636 2073 4.527038 CGGTTAGCTTCCTAATAGGATGGA 59.473 45.833 19.76 2.28 45.34 3.41
1637 2074 5.187967 CGGTTAGCTTCCTAATAGGATGGAT 59.812 44.000 19.76 12.85 45.34 3.41
1638 2075 6.410540 GGTTAGCTTCCTAATAGGATGGATG 58.589 44.000 19.76 6.81 45.34 3.51
1639 2076 4.566426 AGCTTCCTAATAGGATGGATGC 57.434 45.455 19.76 14.11 45.34 3.91
1640 2077 3.912528 AGCTTCCTAATAGGATGGATGCA 59.087 43.478 19.76 0.00 45.34 3.96
1641 2078 4.539293 AGCTTCCTAATAGGATGGATGCAT 59.461 41.667 19.76 0.00 45.34 3.96
1642 2079 4.880696 GCTTCCTAATAGGATGGATGCATC 59.119 45.833 18.81 18.81 45.34 3.91
1643 2080 5.435291 CTTCCTAATAGGATGGATGCATCC 58.565 45.833 34.71 34.71 45.34 3.51
1656 2093 5.757850 GGATGCATCCGAGATAAGTTTTT 57.242 39.130 29.34 0.00 37.19 1.94
1679 2116 9.973661 TTTTTAATAGGATGGATTTGTCTGAGA 57.026 29.630 0.00 0.00 0.00 3.27
1684 2121 6.821616 AGGATGGATTTGTCTGAGATTAGT 57.178 37.500 0.00 0.00 0.00 2.24
1685 2122 7.205515 AGGATGGATTTGTCTGAGATTAGTT 57.794 36.000 0.00 0.00 0.00 2.24
1686 2123 7.637511 AGGATGGATTTGTCTGAGATTAGTTT 58.362 34.615 0.00 0.00 0.00 2.66
1687 2124 7.772757 AGGATGGATTTGTCTGAGATTAGTTTC 59.227 37.037 0.00 0.00 0.00 2.78
1688 2125 7.554118 GGATGGATTTGTCTGAGATTAGTTTCA 59.446 37.037 0.00 0.00 0.00 2.69
1689 2126 9.118300 GATGGATTTGTCTGAGATTAGTTTCAT 57.882 33.333 0.00 0.00 0.00 2.57
1691 2128 9.958180 TGGATTTGTCTGAGATTAGTTTCATAA 57.042 29.630 0.00 0.00 0.00 1.90
1703 2140 9.678260 AGATTAGTTTCATAATAGGATGGATGC 57.322 33.333 0.00 0.00 0.00 3.91
1704 2141 9.453572 GATTAGTTTCATAATAGGATGGATGCA 57.546 33.333 0.00 0.00 0.00 3.96
1705 2142 8.621532 TTAGTTTCATAATAGGATGGATGCAC 57.378 34.615 0.00 0.00 0.00 4.57
1706 2143 6.845908 AGTTTCATAATAGGATGGATGCACT 58.154 36.000 0.00 0.00 0.00 4.40
1707 2144 6.939163 AGTTTCATAATAGGATGGATGCACTC 59.061 38.462 0.00 0.00 0.00 3.51
1708 2145 6.692849 TTCATAATAGGATGGATGCACTCT 57.307 37.500 0.00 0.00 0.00 3.24
1709 2146 6.046290 TCATAATAGGATGGATGCACTCTG 57.954 41.667 0.00 0.00 0.00 3.35
1710 2147 5.781818 TCATAATAGGATGGATGCACTCTGA 59.218 40.000 0.00 0.00 0.00 3.27
1711 2148 6.442885 TCATAATAGGATGGATGCACTCTGAT 59.557 38.462 0.00 0.00 0.00 2.90
1712 2149 5.579753 AATAGGATGGATGCACTCTGATT 57.420 39.130 0.00 0.00 0.00 2.57
1713 2150 3.947612 AGGATGGATGCACTCTGATTT 57.052 42.857 0.00 0.00 0.00 2.17
1714 2151 6.692849 ATAGGATGGATGCACTCTGATTTA 57.307 37.500 0.00 0.00 0.00 1.40
1715 2152 4.970711 AGGATGGATGCACTCTGATTTAG 58.029 43.478 0.00 0.00 0.00 1.85
1716 2153 4.411540 AGGATGGATGCACTCTGATTTAGT 59.588 41.667 0.00 0.00 0.00 2.24
1717 2154 5.104193 AGGATGGATGCACTCTGATTTAGTT 60.104 40.000 0.00 0.00 0.00 2.24
1718 2155 5.591877 GGATGGATGCACTCTGATTTAGTTT 59.408 40.000 0.00 0.00 0.00 2.66
1719 2156 6.238593 GGATGGATGCACTCTGATTTAGTTTC 60.239 42.308 0.00 0.00 0.00 2.78
1720 2157 4.943705 TGGATGCACTCTGATTTAGTTTCC 59.056 41.667 0.00 0.00 0.00 3.13
1721 2158 5.189180 GGATGCACTCTGATTTAGTTTCCT 58.811 41.667 0.00 0.00 0.00 3.36
1722 2159 6.070251 TGGATGCACTCTGATTTAGTTTCCTA 60.070 38.462 0.00 0.00 0.00 2.94
1723 2160 6.481644 GGATGCACTCTGATTTAGTTTCCTAG 59.518 42.308 0.00 0.00 0.00 3.02
1724 2161 6.605471 TGCACTCTGATTTAGTTTCCTAGA 57.395 37.500 0.00 0.00 0.00 2.43
1725 2162 7.004555 TGCACTCTGATTTAGTTTCCTAGAA 57.995 36.000 0.00 0.00 0.00 2.10
1726 2163 7.624549 TGCACTCTGATTTAGTTTCCTAGAAT 58.375 34.615 0.00 0.00 0.00 2.40
1727 2164 8.758829 TGCACTCTGATTTAGTTTCCTAGAATA 58.241 33.333 0.00 0.00 0.00 1.75
1728 2165 9.255304 GCACTCTGATTTAGTTTCCTAGAATAG 57.745 37.037 0.00 0.00 38.80 1.73
1739 2176 1.645710 CTAGAATAGGATGCCCCCGT 58.354 55.000 0.00 0.00 34.22 5.28
1740 2177 1.276421 CTAGAATAGGATGCCCCCGTG 59.724 57.143 0.00 0.00 34.22 4.94
1741 2178 0.399949 AGAATAGGATGCCCCCGTGA 60.400 55.000 0.00 0.00 34.66 4.35
1742 2179 0.693049 GAATAGGATGCCCCCGTGAT 59.307 55.000 0.00 0.00 34.66 3.06
1743 2180 1.906574 GAATAGGATGCCCCCGTGATA 59.093 52.381 0.00 0.00 34.66 2.15
1744 2181 2.038863 ATAGGATGCCCCCGTGATAA 57.961 50.000 0.00 0.00 34.66 1.75
1745 2182 2.038863 TAGGATGCCCCCGTGATAAT 57.961 50.000 0.00 0.00 34.66 1.28
1746 2183 1.149101 AGGATGCCCCCGTGATAATT 58.851 50.000 0.00 0.00 34.66 1.40
1747 2184 2.344592 AGGATGCCCCCGTGATAATTA 58.655 47.619 0.00 0.00 34.66 1.40
1748 2185 2.305927 AGGATGCCCCCGTGATAATTAG 59.694 50.000 0.00 0.00 34.66 1.73
1749 2186 2.039879 GGATGCCCCCGTGATAATTAGT 59.960 50.000 0.00 0.00 0.00 2.24
1750 2187 3.497942 GGATGCCCCCGTGATAATTAGTT 60.498 47.826 0.00 0.00 0.00 2.24
1751 2188 3.655615 TGCCCCCGTGATAATTAGTTT 57.344 42.857 0.00 0.00 0.00 2.66
1752 2189 3.547746 TGCCCCCGTGATAATTAGTTTC 58.452 45.455 0.00 0.00 0.00 2.78
1753 2190 2.882761 GCCCCCGTGATAATTAGTTTCC 59.117 50.000 0.00 0.00 0.00 3.13
1754 2191 3.434596 GCCCCCGTGATAATTAGTTTCCT 60.435 47.826 0.00 0.00 0.00 3.36
1755 2192 4.202388 GCCCCCGTGATAATTAGTTTCCTA 60.202 45.833 0.00 0.00 0.00 2.94
1756 2193 5.688235 GCCCCCGTGATAATTAGTTTCCTAA 60.688 44.000 0.00 0.00 37.56 2.69
1757 2194 6.540083 CCCCCGTGATAATTAGTTTCCTAAT 58.460 40.000 0.00 0.00 44.07 1.73
1767 2204 5.545658 TTAGTTTCCTAATTGCTCAAGCG 57.454 39.130 0.00 0.00 45.83 4.68
1768 2205 3.412386 AGTTTCCTAATTGCTCAAGCGT 58.588 40.909 0.00 0.00 45.83 5.07
1769 2206 3.189287 AGTTTCCTAATTGCTCAAGCGTG 59.811 43.478 0.00 0.00 45.83 5.34
1770 2207 1.737838 TCCTAATTGCTCAAGCGTGG 58.262 50.000 0.00 0.00 45.83 4.94
1771 2208 1.277842 TCCTAATTGCTCAAGCGTGGA 59.722 47.619 0.00 0.00 45.83 4.02
1772 2209 1.667724 CCTAATTGCTCAAGCGTGGAG 59.332 52.381 0.00 0.00 45.83 3.86
1773 2210 2.350522 CTAATTGCTCAAGCGTGGAGT 58.649 47.619 0.00 0.00 45.83 3.85
1774 2211 1.609208 AATTGCTCAAGCGTGGAGTT 58.391 45.000 0.00 0.00 45.83 3.01
1775 2212 1.609208 ATTGCTCAAGCGTGGAGTTT 58.391 45.000 0.00 0.00 45.83 2.66
1776 2213 0.944386 TTGCTCAAGCGTGGAGTTTC 59.056 50.000 0.00 0.00 45.83 2.78
1777 2214 0.179059 TGCTCAAGCGTGGAGTTTCA 60.179 50.000 0.00 0.00 45.83 2.69
1778 2215 1.160137 GCTCAAGCGTGGAGTTTCAT 58.840 50.000 0.00 0.00 34.83 2.57
1779 2216 2.289382 TGCTCAAGCGTGGAGTTTCATA 60.289 45.455 0.00 0.00 45.83 2.15
1780 2217 2.939103 GCTCAAGCGTGGAGTTTCATAT 59.061 45.455 0.00 0.00 34.83 1.78
1781 2218 3.375299 GCTCAAGCGTGGAGTTTCATATT 59.625 43.478 0.00 0.00 34.83 1.28
1782 2219 4.142600 GCTCAAGCGTGGAGTTTCATATTT 60.143 41.667 0.00 0.00 34.83 1.40
1783 2220 5.619981 GCTCAAGCGTGGAGTTTCATATTTT 60.620 40.000 0.00 0.00 34.83 1.82
1784 2221 5.938322 TCAAGCGTGGAGTTTCATATTTTC 58.062 37.500 0.00 0.00 0.00 2.29
1785 2222 4.965119 AGCGTGGAGTTTCATATTTTCC 57.035 40.909 0.00 0.00 0.00 3.13
1786 2223 4.589908 AGCGTGGAGTTTCATATTTTCCT 58.410 39.130 0.00 0.00 0.00 3.36
1787 2224 4.636206 AGCGTGGAGTTTCATATTTTCCTC 59.364 41.667 0.00 0.00 0.00 3.71
1788 2225 4.201920 GCGTGGAGTTTCATATTTTCCTCC 60.202 45.833 0.00 0.00 39.13 4.30
1789 2226 4.941263 CGTGGAGTTTCATATTTTCCTCCA 59.059 41.667 0.00 0.00 44.55 3.86
1791 2228 4.941263 TGGAGTTTCATATTTTCCTCCACG 59.059 41.667 0.00 0.00 42.54 4.94
1792 2229 4.335594 GGAGTTTCATATTTTCCTCCACGG 59.664 45.833 0.00 0.00 38.65 4.94
1793 2230 4.918588 AGTTTCATATTTTCCTCCACGGT 58.081 39.130 0.00 0.00 0.00 4.83
1794 2231 4.700213 AGTTTCATATTTTCCTCCACGGTG 59.300 41.667 0.00 0.00 0.00 4.94
1795 2232 3.275617 TCATATTTTCCTCCACGGTGG 57.724 47.619 21.27 21.27 39.43 4.61
1796 2233 2.841266 TCATATTTTCCTCCACGGTGGA 59.159 45.455 27.17 27.17 45.98 4.02
1803 2240 2.115910 TCCACGGTGGAGTACGGT 59.884 61.111 25.53 0.00 42.67 4.83
1804 2241 1.973281 TCCACGGTGGAGTACGGTC 60.973 63.158 25.53 0.00 42.67 4.79
1805 2242 2.270257 CCACGGTGGAGTACGGTCA 61.270 63.158 22.77 0.00 40.96 4.02
1806 2243 1.211969 CACGGTGGAGTACGGTCAG 59.788 63.158 0.00 0.00 40.42 3.51
1807 2244 1.228367 ACGGTGGAGTACGGTCAGT 60.228 57.895 0.00 0.00 38.30 3.41
1808 2245 1.239968 ACGGTGGAGTACGGTCAGTC 61.240 60.000 0.00 0.00 38.30 3.51
1809 2246 1.239296 CGGTGGAGTACGGTCAGTCA 61.239 60.000 0.00 0.00 0.00 3.41
1810 2247 0.963962 GGTGGAGTACGGTCAGTCAA 59.036 55.000 0.00 0.00 0.00 3.18
1811 2248 1.549170 GGTGGAGTACGGTCAGTCAAT 59.451 52.381 0.00 0.00 0.00 2.57
1851 2717 6.981559 GCACACAGAAAATGGTTTAGGTTAAA 59.018 34.615 0.00 0.00 0.00 1.52
1894 2760 2.185867 GGCCTAATCGTGCGGTGA 59.814 61.111 0.00 0.00 0.00 4.02
1902 2768 4.509970 CCTAATCGTGCGGTGATATTGAAA 59.490 41.667 0.00 0.00 0.00 2.69
1991 2857 6.607004 AAAATCTGCAGTACCTGTACTACT 57.393 37.500 14.67 0.00 43.98 2.57
1994 2860 4.659115 TCTGCAGTACCTGTACTACTTCA 58.341 43.478 14.67 5.53 43.98 3.02
1997 2863 3.427233 GCAGTACCTGTACTACTTCACGG 60.427 52.174 9.50 0.00 43.98 4.94
2000 2866 5.412594 CAGTACCTGTACTACTTCACGGTTA 59.587 44.000 9.50 0.00 43.98 2.85
2001 2867 6.003950 AGTACCTGTACTACTTCACGGTTAA 58.996 40.000 8.17 0.00 43.98 2.01
2002 2868 5.789643 ACCTGTACTACTTCACGGTTAAA 57.210 39.130 0.00 0.00 0.00 1.52
2003 2869 6.160576 ACCTGTACTACTTCACGGTTAAAA 57.839 37.500 0.00 0.00 0.00 1.52
2005 2871 6.479990 ACCTGTACTACTTCACGGTTAAAAAC 59.520 38.462 0.00 0.00 0.00 2.43
2006 2872 6.479660 CCTGTACTACTTCACGGTTAAAAACA 59.520 38.462 0.00 0.00 0.00 2.83
2007 2873 7.011295 CCTGTACTACTTCACGGTTAAAAACAA 59.989 37.037 0.00 0.00 0.00 2.83
2008 2874 7.683746 TGTACTACTTCACGGTTAAAAACAAC 58.316 34.615 0.00 0.00 0.00 3.32
2009 2875 6.740411 ACTACTTCACGGTTAAAAACAACA 57.260 33.333 0.00 0.00 0.00 3.33
2010 2876 7.143514 ACTACTTCACGGTTAAAAACAACAA 57.856 32.000 0.00 0.00 0.00 2.83
2013 2879 6.448852 ACTTCACGGTTAAAAACAACAACTT 58.551 32.000 0.00 0.00 0.00 2.66
2014 2880 6.924612 ACTTCACGGTTAAAAACAACAACTTT 59.075 30.769 0.00 0.00 0.00 2.66
2016 2882 6.444633 TCACGGTTAAAAACAACAACTTTCA 58.555 32.000 0.00 0.00 0.00 2.69
2017 2883 6.921857 TCACGGTTAAAAACAACAACTTTCAA 59.078 30.769 0.00 0.00 0.00 2.69
2018 2884 7.437267 TCACGGTTAAAAACAACAACTTTCAAA 59.563 29.630 0.00 0.00 0.00 2.69
2020 2886 6.728413 CGGTTAAAAACAACAACTTTCAAACG 59.272 34.615 0.00 0.00 0.00 3.60
2021 2887 7.358187 CGGTTAAAAACAACAACTTTCAAACGA 60.358 33.333 0.00 0.00 0.00 3.85
2022 2888 8.436970 GGTTAAAAACAACAACTTTCAAACGAT 58.563 29.630 0.00 0.00 0.00 3.73
2027 2893 9.790389 AAAACAACAACTTTCAAACGATATACA 57.210 25.926 0.00 0.00 0.00 2.29
2028 2894 9.790389 AAACAACAACTTTCAAACGATATACAA 57.210 25.926 0.00 0.00 0.00 2.41
2030 2896 8.073768 ACAACAACTTTCAAACGATATACAAGG 58.926 33.333 0.00 0.00 0.00 3.61
2031 2897 6.608610 ACAACTTTCAAACGATATACAAGGC 58.391 36.000 0.00 0.00 0.00 4.35
2032 2898 5.813080 ACTTTCAAACGATATACAAGGCC 57.187 39.130 0.00 0.00 0.00 5.19
2033 2899 5.250200 ACTTTCAAACGATATACAAGGCCA 58.750 37.500 5.01 0.00 0.00 5.36
2034 2900 5.708230 ACTTTCAAACGATATACAAGGCCAA 59.292 36.000 5.01 0.00 0.00 4.52
2036 2902 5.092554 TCAAACGATATACAAGGCCAAGA 57.907 39.130 5.01 0.00 0.00 3.02
2037 2903 5.680619 TCAAACGATATACAAGGCCAAGAT 58.319 37.500 5.01 0.00 0.00 2.40
2038 2904 5.527214 TCAAACGATATACAAGGCCAAGATG 59.473 40.000 5.01 0.21 0.00 2.90
2039 2905 3.403038 ACGATATACAAGGCCAAGATGC 58.597 45.455 5.01 0.00 0.00 3.91
2040 2906 3.181455 ACGATATACAAGGCCAAGATGCA 60.181 43.478 5.01 0.00 0.00 3.96
2041 2907 4.005650 CGATATACAAGGCCAAGATGCAT 58.994 43.478 5.01 0.00 0.00 3.96
2042 2908 5.178061 CGATATACAAGGCCAAGATGCATA 58.822 41.667 5.01 0.00 0.00 3.14
2043 2909 5.063944 CGATATACAAGGCCAAGATGCATAC 59.936 44.000 5.01 0.00 0.00 2.39
2045 2911 3.931907 ACAAGGCCAAGATGCATACTA 57.068 42.857 5.01 0.00 0.00 1.82
2046 2912 3.813443 ACAAGGCCAAGATGCATACTAG 58.187 45.455 5.01 0.00 0.00 2.57
2047 2913 3.455910 ACAAGGCCAAGATGCATACTAGA 59.544 43.478 5.01 0.00 0.00 2.43
2048 2914 4.080356 ACAAGGCCAAGATGCATACTAGAA 60.080 41.667 5.01 0.00 0.00 2.10
2050 2916 4.649692 AGGCCAAGATGCATACTAGAATG 58.350 43.478 5.01 0.00 0.00 2.67
2063 2929 7.881643 CATACTAGAATGCTCTGGATGTTAC 57.118 40.000 0.00 0.00 34.37 2.50
2064 2930 5.283457 ACTAGAATGCTCTGGATGTTACC 57.717 43.478 0.00 0.00 34.37 2.85
2065 2931 4.716784 ACTAGAATGCTCTGGATGTTACCA 59.283 41.667 0.00 0.00 34.37 3.25
2066 2932 4.574674 AGAATGCTCTGGATGTTACCAA 57.425 40.909 0.00 0.00 39.59 3.67
2067 2933 4.922206 AGAATGCTCTGGATGTTACCAAA 58.078 39.130 0.00 0.00 39.59 3.28
2068 2934 4.702131 AGAATGCTCTGGATGTTACCAAAC 59.298 41.667 0.00 0.00 39.59 2.93
2069 2935 6.521598 TAGAATGCTCTGGATGTTACCAAACA 60.522 38.462 0.00 0.00 40.27 2.83
2070 2936 8.277329 TAGAATGCTCTGGATGTTACCAAACAG 61.277 40.741 0.00 0.00 39.79 3.16
2080 2946 4.992688 TGTTACCAAACAGCAACTTGAAG 58.007 39.130 0.00 0.00 40.69 3.02
2082 2948 5.648526 TGTTACCAAACAGCAACTTGAAGTA 59.351 36.000 0.00 0.00 40.69 2.24
2083 2949 4.900635 ACCAAACAGCAACTTGAAGTAG 57.099 40.909 0.00 0.00 0.00 2.57
2084 2950 3.066760 ACCAAACAGCAACTTGAAGTAGC 59.933 43.478 0.00 0.00 0.00 3.58
2085 2951 3.066621 CCAAACAGCAACTTGAAGTAGCA 59.933 43.478 0.00 0.00 0.00 3.49
2088 2954 4.558538 ACAGCAACTTGAAGTAGCAAAG 57.441 40.909 0.00 0.00 0.00 2.77
2091 2957 4.512944 CAGCAACTTGAAGTAGCAAAGAGA 59.487 41.667 0.00 0.00 0.00 3.10
2092 2958 5.180868 CAGCAACTTGAAGTAGCAAAGAGAT 59.819 40.000 0.00 0.00 0.00 2.75
2093 2959 5.411053 AGCAACTTGAAGTAGCAAAGAGATC 59.589 40.000 0.00 0.00 0.00 2.75
2095 2961 5.392767 ACTTGAAGTAGCAAAGAGATCGA 57.607 39.130 0.00 0.00 0.00 3.59
2096 2962 5.971763 ACTTGAAGTAGCAAAGAGATCGAT 58.028 37.500 0.00 0.00 0.00 3.59
2097 2963 7.101652 ACTTGAAGTAGCAAAGAGATCGATA 57.898 36.000 0.00 0.00 0.00 2.92
2098 2964 6.975772 ACTTGAAGTAGCAAAGAGATCGATAC 59.024 38.462 0.00 0.00 0.00 2.24
2099 2965 6.451064 TGAAGTAGCAAAGAGATCGATACA 57.549 37.500 0.00 0.00 0.00 2.29
2100 2966 6.863275 TGAAGTAGCAAAGAGATCGATACAA 58.137 36.000 0.00 0.00 0.00 2.41
2101 2967 7.320399 TGAAGTAGCAAAGAGATCGATACAAA 58.680 34.615 0.00 0.00 0.00 2.83
2102 2968 7.817478 TGAAGTAGCAAAGAGATCGATACAAAA 59.183 33.333 0.00 0.00 0.00 2.44
2103 2969 8.547967 AAGTAGCAAAGAGATCGATACAAAAA 57.452 30.769 0.00 0.00 0.00 1.94
2125 2991 8.814038 AAAAAGTAGCAAAGAGATCCATACAT 57.186 30.769 0.00 0.00 0.00 2.29
2126 2992 9.905713 AAAAAGTAGCAAAGAGATCCATACATA 57.094 29.630 0.00 0.00 0.00 2.29
2127 2993 8.894768 AAAGTAGCAAAGAGATCCATACATAC 57.105 34.615 0.00 0.00 0.00 2.39
2128 2994 7.603180 AGTAGCAAAGAGATCCATACATACA 57.397 36.000 0.00 0.00 0.00 2.29
2129 2995 8.023021 AGTAGCAAAGAGATCCATACATACAA 57.977 34.615 0.00 0.00 0.00 2.41
2130 2996 8.486210 AGTAGCAAAGAGATCCATACATACAAA 58.514 33.333 0.00 0.00 0.00 2.83
2131 2997 9.277783 GTAGCAAAGAGATCCATACATACAAAT 57.722 33.333 0.00 0.00 0.00 2.32
2133 2999 9.499479 AGCAAAGAGATCCATACATACAAATAG 57.501 33.333 0.00 0.00 0.00 1.73
2134 3000 9.277783 GCAAAGAGATCCATACATACAAATAGT 57.722 33.333 0.00 0.00 0.00 2.12
2140 3006 9.036980 AGATCCATACATACAAATAGTACTCCC 57.963 37.037 0.00 0.00 35.05 4.30
2141 3007 8.974292 ATCCATACATACAAATAGTACTCCCT 57.026 34.615 0.00 0.00 35.05 4.20
2142 3008 8.418597 TCCATACATACAAATAGTACTCCCTC 57.581 38.462 0.00 0.00 35.05 4.30
2143 3009 7.453752 TCCATACATACAAATAGTACTCCCTCC 59.546 40.741 0.00 0.00 35.05 4.30
2144 3010 5.786264 ACATACAAATAGTACTCCCTCCG 57.214 43.478 0.00 0.00 35.05 4.63
2146 3012 5.659971 ACATACAAATAGTACTCCCTCCGTT 59.340 40.000 0.00 0.00 35.05 4.44
2148 3014 3.450096 ACAAATAGTACTCCCTCCGTTCC 59.550 47.826 0.00 0.00 0.00 3.62
2149 3015 3.684408 AATAGTACTCCCTCCGTTCCT 57.316 47.619 0.00 0.00 0.00 3.36
2150 3016 4.803329 AATAGTACTCCCTCCGTTCCTA 57.197 45.455 0.00 0.00 0.00 2.94
2155 3021 4.892345 AGTACTCCCTCCGTTCCTAAATAC 59.108 45.833 0.00 0.00 0.00 1.89
2156 3022 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
2157 3023 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
2158 3024 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
2159 3025 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
2161 3027 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
2162 3028 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
2163 3029 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
2165 3031 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
2166 3032 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
2168 3034 7.491696 CCGTTCCTAAATACTTGTCTTTCTAGG 59.508 40.741 0.00 0.00 0.00 3.02
2169 3035 7.010275 CGTTCCTAAATACTTGTCTTTCTAGGC 59.990 40.741 0.00 0.00 0.00 3.93
2171 3037 8.090788 TCCTAAATACTTGTCTTTCTAGGCAT 57.909 34.615 0.00 0.00 35.56 4.40
2175 3041 8.635765 AAATACTTGTCTTTCTAGGCATTTCA 57.364 30.769 0.00 0.00 35.56 2.69
2176 3042 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
2177 3043 6.319141 ACTTGTCTTTCTAGGCATTTCAAC 57.681 37.500 0.00 0.00 35.56 3.18
2178 3044 5.827797 ACTTGTCTTTCTAGGCATTTCAACA 59.172 36.000 0.00 0.00 35.56 3.33
2179 3045 6.321181 ACTTGTCTTTCTAGGCATTTCAACAA 59.679 34.615 0.00 0.00 35.56 2.83
2180 3046 6.317789 TGTCTTTCTAGGCATTTCAACAAG 57.682 37.500 0.00 0.00 29.10 3.16
2182 3048 6.145535 GTCTTTCTAGGCATTTCAACAAGTG 58.854 40.000 0.00 0.00 0.00 3.16
2184 3050 5.689383 TTCTAGGCATTTCAACAAGTGAC 57.311 39.130 0.00 0.00 35.39 3.67
2186 3052 6.109156 TCTAGGCATTTCAACAAGTGACTA 57.891 37.500 0.00 0.00 38.51 2.59
2188 3054 4.460263 AGGCATTTCAACAAGTGACTACA 58.540 39.130 0.00 0.00 35.84 2.74
2189 3055 5.072741 AGGCATTTCAACAAGTGACTACAT 58.927 37.500 0.00 0.00 35.84 2.29
2191 3057 6.149474 AGGCATTTCAACAAGTGACTACATAC 59.851 38.462 0.00 0.00 35.84 2.39
2193 3059 6.534059 CATTTCAACAAGTGACTACATACGG 58.466 40.000 0.00 0.00 35.39 4.02
2194 3060 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
2195 3061 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
2196 3062 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
2197 3063 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
2199 3065 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
2200 3066 4.111375 AGTGACTACATACGGAGCAAAG 57.889 45.455 0.00 0.00 0.00 2.77
2202 3068 4.703575 AGTGACTACATACGGAGCAAAGTA 59.296 41.667 0.00 0.00 0.00 2.24
2203 3069 5.184479 AGTGACTACATACGGAGCAAAGTAA 59.816 40.000 0.00 0.00 0.00 2.24
2206 3072 6.533723 TGACTACATACGGAGCAAAGTAAATG 59.466 38.462 0.00 0.00 0.00 2.32
2207 3073 6.636705 ACTACATACGGAGCAAAGTAAATGA 58.363 36.000 0.00 0.00 0.00 2.57
2208 3074 7.101054 ACTACATACGGAGCAAAGTAAATGAA 58.899 34.615 0.00 0.00 0.00 2.57
2210 3076 7.016361 ACATACGGAGCAAAGTAAATGAATC 57.984 36.000 0.00 0.00 0.00 2.52
2211 3077 6.823689 ACATACGGAGCAAAGTAAATGAATCT 59.176 34.615 0.00 0.00 0.00 2.40
2212 3078 5.551760 ACGGAGCAAAGTAAATGAATCTG 57.448 39.130 0.00 0.00 0.00 2.90
2213 3079 4.142600 ACGGAGCAAAGTAAATGAATCTGC 60.143 41.667 0.00 0.00 0.00 4.26
2214 3080 4.142622 CGGAGCAAAGTAAATGAATCTGCA 60.143 41.667 0.00 0.00 0.00 4.41
2216 3082 5.105997 GGAGCAAAGTAAATGAATCTGCACT 60.106 40.000 0.00 0.00 0.00 4.40
2218 3084 5.709164 AGCAAAGTAAATGAATCTGCACTCT 59.291 36.000 0.00 0.00 0.00 3.24
2219 3085 6.881065 AGCAAAGTAAATGAATCTGCACTCTA 59.119 34.615 0.00 0.00 0.00 2.43
2220 3086 7.391554 AGCAAAGTAAATGAATCTGCACTCTAA 59.608 33.333 0.00 0.00 0.00 2.10
2221 3087 8.023128 GCAAAGTAAATGAATCTGCACTCTAAA 58.977 33.333 0.00 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
476 479 7.924412 TCTTAGAGAAAACTTTACACGTGTCAT 59.076 33.333 27.16 6.27 0.00 3.06
481 484 8.882415 TCATTCTTAGAGAAAACTTTACACGT 57.118 30.769 0.00 0.00 37.82 4.49
751 754 5.877012 GGATACTGAAGAAGTCAAGATGCAA 59.123 40.000 0.00 0.00 40.56 4.08
882 889 7.448469 GGGCCTTCAAGCAATCTAGAATTATAA 59.552 37.037 0.84 0.00 0.00 0.98
1261 1698 6.692849 AAATCAGAGTGCATCCATCCTATA 57.307 37.500 0.00 0.00 0.00 1.31
1390 1827 4.488126 TCATTTTCTGTGTGCACTTAGC 57.512 40.909 19.41 6.38 45.96 3.09
1391 1828 7.752239 CCTAAATCATTTTCTGTGTGCACTTAG 59.248 37.037 19.41 15.55 0.00 2.18
1392 1829 7.230510 ACCTAAATCATTTTCTGTGTGCACTTA 59.769 33.333 19.41 5.91 0.00 2.24
1393 1830 6.040842 ACCTAAATCATTTTCTGTGTGCACTT 59.959 34.615 19.41 1.31 0.00 3.16
1394 1831 5.536161 ACCTAAATCATTTTCTGTGTGCACT 59.464 36.000 19.41 0.00 0.00 4.40
1395 1832 5.772521 ACCTAAATCATTTTCTGTGTGCAC 58.227 37.500 10.75 10.75 0.00 4.57
1396 1833 6.403866 AACCTAAATCATTTTCTGTGTGCA 57.596 33.333 0.00 0.00 0.00 4.57
1397 1834 7.542130 CCTTAACCTAAATCATTTTCTGTGTGC 59.458 37.037 0.00 0.00 0.00 4.57
1398 1835 7.542130 GCCTTAACCTAAATCATTTTCTGTGTG 59.458 37.037 0.00 0.00 0.00 3.82
1399 1836 7.451566 AGCCTTAACCTAAATCATTTTCTGTGT 59.548 33.333 0.00 0.00 0.00 3.72
1400 1837 7.830739 AGCCTTAACCTAAATCATTTTCTGTG 58.169 34.615 0.00 0.00 0.00 3.66
1401 1838 9.528489 TTAGCCTTAACCTAAATCATTTTCTGT 57.472 29.630 0.00 0.00 0.00 3.41
1402 1839 9.788960 GTTAGCCTTAACCTAAATCATTTTCTG 57.211 33.333 0.00 0.00 34.37 3.02
1417 1854 7.964604 AATCAATCTATCGGTTAGCCTTAAC 57.035 36.000 0.00 0.00 38.74 2.01
1418 1855 8.974060 AAAATCAATCTATCGGTTAGCCTTAA 57.026 30.769 0.00 0.00 0.00 1.85
1419 1856 9.706691 CTAAAATCAATCTATCGGTTAGCCTTA 57.293 33.333 0.00 0.00 0.00 2.69
1420 1857 8.211629 ACTAAAATCAATCTATCGGTTAGCCTT 58.788 33.333 0.00 0.00 0.00 4.35
1421 1858 7.657761 CACTAAAATCAATCTATCGGTTAGCCT 59.342 37.037 0.00 0.00 0.00 4.58
1422 1859 7.095187 CCACTAAAATCAATCTATCGGTTAGCC 60.095 40.741 0.00 0.00 0.00 3.93
1423 1860 7.095187 CCCACTAAAATCAATCTATCGGTTAGC 60.095 40.741 0.00 0.00 0.00 3.09
1424 1861 7.095187 GCCCACTAAAATCAATCTATCGGTTAG 60.095 40.741 0.00 0.00 0.00 2.34
1425 1862 6.708949 GCCCACTAAAATCAATCTATCGGTTA 59.291 38.462 0.00 0.00 0.00 2.85
1426 1863 5.531287 GCCCACTAAAATCAATCTATCGGTT 59.469 40.000 0.00 0.00 0.00 4.44
1427 1864 5.063880 GCCCACTAAAATCAATCTATCGGT 58.936 41.667 0.00 0.00 0.00 4.69
1428 1865 4.455877 GGCCCACTAAAATCAATCTATCGG 59.544 45.833 0.00 0.00 0.00 4.18
1429 1866 5.308825 AGGCCCACTAAAATCAATCTATCG 58.691 41.667 0.00 0.00 0.00 2.92
1430 1867 8.870075 ATTAGGCCCACTAAAATCAATCTATC 57.130 34.615 0.00 0.00 44.39 2.08
1431 1868 7.607991 CGATTAGGCCCACTAAAATCAATCTAT 59.392 37.037 0.00 0.00 44.39 1.98
1432 1869 6.934645 CGATTAGGCCCACTAAAATCAATCTA 59.065 38.462 0.00 0.00 44.39 1.98
1433 1870 5.765182 CGATTAGGCCCACTAAAATCAATCT 59.235 40.000 0.00 0.00 44.39 2.40
1434 1871 5.531287 ACGATTAGGCCCACTAAAATCAATC 59.469 40.000 0.00 0.00 44.39 2.67
1435 1872 5.299279 CACGATTAGGCCCACTAAAATCAAT 59.701 40.000 0.00 0.00 44.39 2.57
1436 1873 4.638421 CACGATTAGGCCCACTAAAATCAA 59.362 41.667 0.00 0.00 44.39 2.57
1437 1874 4.196193 CACGATTAGGCCCACTAAAATCA 58.804 43.478 0.00 0.00 44.39 2.57
1438 1875 3.003378 GCACGATTAGGCCCACTAAAATC 59.997 47.826 0.00 0.00 44.39 2.17
1439 1876 2.949644 GCACGATTAGGCCCACTAAAAT 59.050 45.455 0.00 0.00 44.39 1.82
1440 1877 2.361789 GCACGATTAGGCCCACTAAAA 58.638 47.619 0.00 0.00 44.39 1.52
1441 1878 1.741055 CGCACGATTAGGCCCACTAAA 60.741 52.381 0.00 0.00 44.39 1.85
1442 1879 0.179094 CGCACGATTAGGCCCACTAA 60.179 55.000 0.00 0.00 45.24 2.24
1443 1880 1.440060 CGCACGATTAGGCCCACTA 59.560 57.895 0.00 0.00 0.00 2.74
1444 1881 2.186903 CGCACGATTAGGCCCACT 59.813 61.111 0.00 0.00 0.00 4.00
1445 1882 2.895372 CCGCACGATTAGGCCCAC 60.895 66.667 0.00 0.00 0.00 4.61
1446 1883 3.395702 ACCGCACGATTAGGCCCA 61.396 61.111 0.00 0.00 0.00 5.36
1447 1884 2.895372 CACCGCACGATTAGGCCC 60.895 66.667 0.00 0.00 0.00 5.80
1448 1885 2.300850 TACCACCGCACGATTAGGCC 62.301 60.000 0.00 0.00 0.00 5.19
1449 1886 0.249741 ATACCACCGCACGATTAGGC 60.250 55.000 0.00 0.00 0.00 3.93
1450 1887 1.864711 CAATACCACCGCACGATTAGG 59.135 52.381 0.00 0.00 0.00 2.69
1451 1888 1.864711 CCAATACCACCGCACGATTAG 59.135 52.381 0.00 0.00 0.00 1.73
1452 1889 1.481363 TCCAATACCACCGCACGATTA 59.519 47.619 0.00 0.00 0.00 1.75
1453 1890 0.250793 TCCAATACCACCGCACGATT 59.749 50.000 0.00 0.00 0.00 3.34
1454 1891 0.468226 ATCCAATACCACCGCACGAT 59.532 50.000 0.00 0.00 0.00 3.73
1455 1892 0.179094 GATCCAATACCACCGCACGA 60.179 55.000 0.00 0.00 0.00 4.35
1456 1893 0.179084 AGATCCAATACCACCGCACG 60.179 55.000 0.00 0.00 0.00 5.34
1457 1894 1.299541 CAGATCCAATACCACCGCAC 58.700 55.000 0.00 0.00 0.00 5.34
1458 1895 0.908910 ACAGATCCAATACCACCGCA 59.091 50.000 0.00 0.00 0.00 5.69
1459 1896 1.299541 CACAGATCCAATACCACCGC 58.700 55.000 0.00 0.00 0.00 5.68
1460 1897 2.691409 ACACAGATCCAATACCACCG 57.309 50.000 0.00 0.00 0.00 4.94
1461 1898 4.081087 AGTGTACACAGATCCAATACCACC 60.081 45.833 27.06 0.00 0.00 4.61
1462 1899 5.086104 AGTGTACACAGATCCAATACCAC 57.914 43.478 27.06 0.00 0.00 4.16
1463 1900 5.755409 AAGTGTACACAGATCCAATACCA 57.245 39.130 27.06 0.00 0.00 3.25
1464 1901 5.938125 ACAAAGTGTACACAGATCCAATACC 59.062 40.000 27.06 0.00 0.00 2.73
1465 1902 6.128282 CCACAAAGTGTACACAGATCCAATAC 60.128 42.308 27.06 0.00 0.00 1.89
1466 1903 5.937540 CCACAAAGTGTACACAGATCCAATA 59.062 40.000 27.06 0.00 0.00 1.90
1467 1904 4.761739 CCACAAAGTGTACACAGATCCAAT 59.238 41.667 27.06 1.38 0.00 3.16
1468 1905 4.133820 CCACAAAGTGTACACAGATCCAA 58.866 43.478 27.06 0.00 0.00 3.53
1469 1906 3.495983 CCCACAAAGTGTACACAGATCCA 60.496 47.826 27.06 0.00 0.00 3.41
1470 1907 3.074412 CCCACAAAGTGTACACAGATCC 58.926 50.000 27.06 0.00 0.00 3.36
1471 1908 3.074412 CCCCACAAAGTGTACACAGATC 58.926 50.000 27.06 0.12 0.00 2.75
1472 1909 2.441750 ACCCCACAAAGTGTACACAGAT 59.558 45.455 27.06 10.64 0.00 2.90
1473 1910 1.841277 ACCCCACAAAGTGTACACAGA 59.159 47.619 27.06 0.00 0.00 3.41
1474 1911 1.946768 CACCCCACAAAGTGTACACAG 59.053 52.381 27.06 17.96 0.00 3.66
1475 1912 1.282447 ACACCCCACAAAGTGTACACA 59.718 47.619 27.06 0.00 45.14 3.72
1476 1913 1.673920 CACACCCCACAAAGTGTACAC 59.326 52.381 18.56 18.56 45.20 2.90
1477 1914 2.019668 GCACACCCCACAAAGTGTACA 61.020 52.381 0.00 0.00 45.20 2.90
1478 1915 0.666374 GCACACCCCACAAAGTGTAC 59.334 55.000 0.00 0.00 45.20 2.90
1479 1916 0.548989 AGCACACCCCACAAAGTGTA 59.451 50.000 0.00 0.00 45.20 2.90
1481 1918 1.686355 TAAGCACACCCCACAAAGTG 58.314 50.000 0.00 0.00 39.93 3.16
1482 1919 2.445682 TTAAGCACACCCCACAAAGT 57.554 45.000 0.00 0.00 0.00 2.66
1483 1920 3.810310 TTTTAAGCACACCCCACAAAG 57.190 42.857 0.00 0.00 0.00 2.77
1524 1961 9.584008 TTCTTCGGGAACATCTATACTACTATT 57.416 33.333 0.00 0.00 0.00 1.73
1525 1962 9.584008 TTTCTTCGGGAACATCTATACTACTAT 57.416 33.333 0.00 0.00 33.13 2.12
1526 1963 8.985315 TTTCTTCGGGAACATCTATACTACTA 57.015 34.615 0.00 0.00 33.13 1.82
1527 1964 7.778853 TCTTTCTTCGGGAACATCTATACTACT 59.221 37.037 0.00 0.00 33.13 2.57
1528 1965 7.861872 GTCTTTCTTCGGGAACATCTATACTAC 59.138 40.741 0.00 0.00 33.13 2.73
1529 1966 7.255035 CGTCTTTCTTCGGGAACATCTATACTA 60.255 40.741 0.00 0.00 33.13 1.82
1530 1967 6.459848 CGTCTTTCTTCGGGAACATCTATACT 60.460 42.308 0.00 0.00 33.13 2.12
1531 1968 5.686397 CGTCTTTCTTCGGGAACATCTATAC 59.314 44.000 0.00 0.00 33.13 1.47
1532 1969 5.591472 TCGTCTTTCTTCGGGAACATCTATA 59.409 40.000 0.00 0.00 33.13 1.31
1533 1970 4.401519 TCGTCTTTCTTCGGGAACATCTAT 59.598 41.667 0.00 0.00 33.13 1.98
1534 1971 3.760151 TCGTCTTTCTTCGGGAACATCTA 59.240 43.478 0.00 0.00 33.13 1.98
1535 1972 2.561419 TCGTCTTTCTTCGGGAACATCT 59.439 45.455 0.00 0.00 33.13 2.90
1536 1973 2.955614 TCGTCTTTCTTCGGGAACATC 58.044 47.619 0.00 0.00 33.13 3.06
1537 1974 3.326747 CTTCGTCTTTCTTCGGGAACAT 58.673 45.455 0.00 0.00 33.13 2.71
1538 1975 2.750948 CTTCGTCTTTCTTCGGGAACA 58.249 47.619 0.00 0.00 33.13 3.18
1539 1976 1.459975 GCTTCGTCTTTCTTCGGGAAC 59.540 52.381 0.00 0.00 33.13 3.62
1540 1977 1.343465 AGCTTCGTCTTTCTTCGGGAA 59.657 47.619 0.00 0.00 0.00 3.97
1541 1978 0.966920 AGCTTCGTCTTTCTTCGGGA 59.033 50.000 0.00 0.00 0.00 5.14
1542 1979 1.351153 GAGCTTCGTCTTTCTTCGGG 58.649 55.000 0.00 0.00 0.00 5.14
1543 1980 1.067495 AGGAGCTTCGTCTTTCTTCGG 60.067 52.381 0.00 0.00 0.00 4.30
1544 1981 2.255316 GAGGAGCTTCGTCTTTCTTCG 58.745 52.381 0.00 0.00 0.00 3.79
1545 1982 2.255316 CGAGGAGCTTCGTCTTTCTTC 58.745 52.381 0.00 0.00 35.91 2.87
1546 1983 1.670380 GCGAGGAGCTTCGTCTTTCTT 60.670 52.381 9.41 0.00 44.04 2.52
1547 1984 0.109039 GCGAGGAGCTTCGTCTTTCT 60.109 55.000 9.41 0.00 44.04 2.52
1548 1985 1.406970 CGCGAGGAGCTTCGTCTTTC 61.407 60.000 0.00 0.00 45.59 2.62
1549 1986 1.444553 CGCGAGGAGCTTCGTCTTT 60.445 57.895 0.00 0.00 45.59 2.52
1550 1987 2.179517 CGCGAGGAGCTTCGTCTT 59.820 61.111 0.00 0.00 45.59 3.01
1551 1988 4.484258 GCGCGAGGAGCTTCGTCT 62.484 66.667 12.10 0.00 45.59 4.18
1552 1989 4.484258 AGCGCGAGGAGCTTCGTC 62.484 66.667 12.10 3.35 43.24 4.20
1561 1998 4.918201 GATGGGGGAAGCGCGAGG 62.918 72.222 12.10 0.00 0.00 4.63
1567 2004 2.666596 CTAGCCACGATGGGGGAAGC 62.667 65.000 0.00 0.00 38.19 3.86
1568 2005 1.447643 CTAGCCACGATGGGGGAAG 59.552 63.158 0.00 0.00 38.19 3.46
1569 2006 2.742116 GCTAGCCACGATGGGGGAA 61.742 63.158 2.29 0.00 38.19 3.97
1570 2007 3.161450 GCTAGCCACGATGGGGGA 61.161 66.667 2.29 0.00 38.19 4.81
1571 2008 4.609018 CGCTAGCCACGATGGGGG 62.609 72.222 9.66 0.00 38.19 5.40
1572 2009 3.849951 ACGCTAGCCACGATGGGG 61.850 66.667 9.66 0.00 38.19 4.96
1573 2010 2.586079 CACGCTAGCCACGATGGG 60.586 66.667 9.66 0.00 38.19 4.00
1574 2011 3.264897 GCACGCTAGCCACGATGG 61.265 66.667 9.66 0.00 41.55 3.51
1575 2012 1.884464 ATGCACGCTAGCCACGATG 60.884 57.895 9.66 1.30 0.00 3.84
1576 2013 1.884464 CATGCACGCTAGCCACGAT 60.884 57.895 9.66 0.00 0.00 3.73
1577 2014 2.296814 ATCATGCACGCTAGCCACGA 62.297 55.000 9.66 0.00 0.00 4.35
1578 2015 1.884464 ATCATGCACGCTAGCCACG 60.884 57.895 9.66 0.00 0.00 4.94
1579 2016 1.645455 CATCATGCACGCTAGCCAC 59.355 57.895 9.66 0.00 0.00 5.01
1580 2017 1.524393 CCATCATGCACGCTAGCCA 60.524 57.895 9.66 1.33 0.00 4.75
1581 2018 2.901292 GCCATCATGCACGCTAGCC 61.901 63.158 9.66 0.00 0.00 3.93
1582 2019 2.635899 GCCATCATGCACGCTAGC 59.364 61.111 4.06 4.06 0.00 3.42
1583 2020 2.601398 CCGCCATCATGCACGCTAG 61.601 63.158 0.00 0.00 0.00 3.42
1584 2021 2.588596 CCGCCATCATGCACGCTA 60.589 61.111 0.00 0.00 0.00 4.26
1587 2024 4.246206 CTGCCGCCATCATGCACG 62.246 66.667 0.00 0.00 0.00 5.34
1588 2025 3.896133 CCTGCCGCCATCATGCAC 61.896 66.667 0.00 0.00 0.00 4.57
1601 2038 4.752879 TAACCGTGAGCCGCCTGC 62.753 66.667 0.00 0.00 41.71 4.85
1602 2039 2.509336 CTAACCGTGAGCCGCCTG 60.509 66.667 0.00 0.00 34.38 4.85
1603 2040 4.452733 GCTAACCGTGAGCCGCCT 62.453 66.667 0.00 0.00 33.60 5.52
1604 2041 3.952628 AAGCTAACCGTGAGCCGCC 62.953 63.158 4.05 0.00 41.06 6.13
1605 2042 2.434359 AAGCTAACCGTGAGCCGC 60.434 61.111 4.05 0.00 41.06 6.53
1606 2043 1.810030 GGAAGCTAACCGTGAGCCG 60.810 63.158 4.05 0.00 41.06 5.52
1607 2044 0.822164 TAGGAAGCTAACCGTGAGCC 59.178 55.000 4.05 0.00 41.06 4.70
1608 2045 2.667473 TTAGGAAGCTAACCGTGAGC 57.333 50.000 0.00 0.00 40.42 4.26
1609 2046 4.583489 TCCTATTAGGAAGCTAACCGTGAG 59.417 45.833 10.10 0.00 42.51 3.51
1610 2047 4.539726 TCCTATTAGGAAGCTAACCGTGA 58.460 43.478 10.10 0.00 42.51 4.35
1611 2048 4.931661 TCCTATTAGGAAGCTAACCGTG 57.068 45.455 10.10 0.00 42.51 4.94
1634 2071 5.757850 AAAAACTTATCTCGGATGCATCC 57.242 39.130 32.34 32.34 43.65 3.51
1653 2090 9.973661 TCTCAGACAAATCCATCCTATTAAAAA 57.026 29.630 0.00 0.00 0.00 1.94
1658 2095 8.943085 ACTAATCTCAGACAAATCCATCCTATT 58.057 33.333 0.00 0.00 0.00 1.73
1659 2096 8.503428 ACTAATCTCAGACAAATCCATCCTAT 57.497 34.615 0.00 0.00 0.00 2.57
1660 2097 7.921041 ACTAATCTCAGACAAATCCATCCTA 57.079 36.000 0.00 0.00 0.00 2.94
1661 2098 6.821616 ACTAATCTCAGACAAATCCATCCT 57.178 37.500 0.00 0.00 0.00 3.24
1662 2099 7.554118 TGAAACTAATCTCAGACAAATCCATCC 59.446 37.037 0.00 0.00 0.00 3.51
1663 2100 8.498054 TGAAACTAATCTCAGACAAATCCATC 57.502 34.615 0.00 0.00 0.00 3.51
1665 2102 9.958180 TTATGAAACTAATCTCAGACAAATCCA 57.042 29.630 0.00 0.00 0.00 3.41
1677 2114 9.678260 GCATCCATCCTATTATGAAACTAATCT 57.322 33.333 0.00 0.00 0.00 2.40
1678 2115 9.453572 TGCATCCATCCTATTATGAAACTAATC 57.546 33.333 0.00 0.00 0.00 1.75
1679 2116 9.236006 GTGCATCCATCCTATTATGAAACTAAT 57.764 33.333 0.00 0.00 0.00 1.73
1680 2117 8.439971 AGTGCATCCATCCTATTATGAAACTAA 58.560 33.333 0.00 0.00 0.00 2.24
1681 2118 7.977818 AGTGCATCCATCCTATTATGAAACTA 58.022 34.615 0.00 0.00 0.00 2.24
1682 2119 6.845908 AGTGCATCCATCCTATTATGAAACT 58.154 36.000 0.00 0.00 0.00 2.66
1683 2120 6.939163 AGAGTGCATCCATCCTATTATGAAAC 59.061 38.462 0.00 0.00 0.00 2.78
1684 2121 6.938596 CAGAGTGCATCCATCCTATTATGAAA 59.061 38.462 0.00 0.00 0.00 2.69
1685 2122 6.270695 TCAGAGTGCATCCATCCTATTATGAA 59.729 38.462 0.00 0.00 0.00 2.57
1686 2123 5.781818 TCAGAGTGCATCCATCCTATTATGA 59.218 40.000 0.00 0.00 0.00 2.15
1687 2124 6.046290 TCAGAGTGCATCCATCCTATTATG 57.954 41.667 0.00 0.00 0.00 1.90
1688 2125 6.887886 ATCAGAGTGCATCCATCCTATTAT 57.112 37.500 0.00 0.00 0.00 1.28
1689 2126 6.692849 AATCAGAGTGCATCCATCCTATTA 57.307 37.500 0.00 0.00 0.00 0.98
1690 2127 5.579753 AATCAGAGTGCATCCATCCTATT 57.420 39.130 0.00 0.00 0.00 1.73
1691 2128 5.579753 AAATCAGAGTGCATCCATCCTAT 57.420 39.130 0.00 0.00 0.00 2.57
1692 2129 5.604231 ACTAAATCAGAGTGCATCCATCCTA 59.396 40.000 0.00 0.00 0.00 2.94
1693 2130 3.947612 AAATCAGAGTGCATCCATCCT 57.052 42.857 0.00 0.00 0.00 3.24
1694 2131 4.712476 ACTAAATCAGAGTGCATCCATCC 58.288 43.478 0.00 0.00 0.00 3.51
1695 2132 6.238593 GGAAACTAAATCAGAGTGCATCCATC 60.239 42.308 0.00 0.00 30.76 3.51
1696 2133 5.591877 GGAAACTAAATCAGAGTGCATCCAT 59.408 40.000 0.00 0.00 30.76 3.41
1697 2134 4.943705 GGAAACTAAATCAGAGTGCATCCA 59.056 41.667 0.00 0.00 30.76 3.41
1698 2135 5.189180 AGGAAACTAAATCAGAGTGCATCC 58.811 41.667 0.00 0.00 40.61 3.51
1699 2136 7.268586 TCTAGGAAACTAAATCAGAGTGCATC 58.731 38.462 0.00 0.00 43.83 3.91
1700 2137 7.187824 TCTAGGAAACTAAATCAGAGTGCAT 57.812 36.000 0.00 0.00 43.83 3.96
1701 2138 6.605471 TCTAGGAAACTAAATCAGAGTGCA 57.395 37.500 0.00 0.00 43.83 4.57
1702 2139 9.255304 CTATTCTAGGAAACTAAATCAGAGTGC 57.745 37.037 0.00 0.00 43.83 4.40
1720 2157 1.276421 CACGGGGGCATCCTATTCTAG 59.724 57.143 0.00 0.00 35.33 2.43
1721 2158 1.132977 TCACGGGGGCATCCTATTCTA 60.133 52.381 0.00 0.00 35.33 2.10
1722 2159 0.399949 TCACGGGGGCATCCTATTCT 60.400 55.000 0.00 0.00 35.33 2.40
1723 2160 0.693049 ATCACGGGGGCATCCTATTC 59.307 55.000 0.00 0.00 35.33 1.75
1724 2161 2.038863 TATCACGGGGGCATCCTATT 57.961 50.000 0.00 0.00 35.33 1.73
1725 2162 2.038863 TTATCACGGGGGCATCCTAT 57.961 50.000 0.00 0.00 35.33 2.57
1726 2163 2.038863 ATTATCACGGGGGCATCCTA 57.961 50.000 0.00 0.00 35.33 2.94
1727 2164 1.149101 AATTATCACGGGGGCATCCT 58.851 50.000 0.00 0.00 35.33 3.24
1728 2165 2.039879 ACTAATTATCACGGGGGCATCC 59.960 50.000 0.00 0.00 0.00 3.51
1729 2166 3.418684 ACTAATTATCACGGGGGCATC 57.581 47.619 0.00 0.00 0.00 3.91
1730 2167 3.876309 AACTAATTATCACGGGGGCAT 57.124 42.857 0.00 0.00 0.00 4.40
1731 2168 3.547746 GAAACTAATTATCACGGGGGCA 58.452 45.455 0.00 0.00 0.00 5.36
1732 2169 2.882761 GGAAACTAATTATCACGGGGGC 59.117 50.000 0.00 0.00 0.00 5.80
1733 2170 4.432980 AGGAAACTAATTATCACGGGGG 57.567 45.455 0.00 0.00 40.61 5.40
1746 2183 4.391830 CACGCTTGAGCAATTAGGAAACTA 59.608 41.667 3.65 0.00 41.13 2.24
1747 2184 3.189287 CACGCTTGAGCAATTAGGAAACT 59.811 43.478 3.65 0.00 42.94 2.66
1748 2185 3.492313 CACGCTTGAGCAATTAGGAAAC 58.508 45.455 3.65 0.00 42.21 2.78
1749 2186 2.487762 CCACGCTTGAGCAATTAGGAAA 59.512 45.455 3.65 0.00 42.21 3.13
1750 2187 2.083774 CCACGCTTGAGCAATTAGGAA 58.916 47.619 3.65 0.00 42.21 3.36
1751 2188 1.277842 TCCACGCTTGAGCAATTAGGA 59.722 47.619 3.65 0.14 42.21 2.94
1752 2189 1.667724 CTCCACGCTTGAGCAATTAGG 59.332 52.381 3.65 0.00 42.21 2.69
1753 2190 2.350522 ACTCCACGCTTGAGCAATTAG 58.649 47.619 3.65 0.00 42.21 1.73
1754 2191 2.472695 ACTCCACGCTTGAGCAATTA 57.527 45.000 3.65 0.00 42.21 1.40
1755 2192 1.609208 AACTCCACGCTTGAGCAATT 58.391 45.000 3.65 0.00 42.21 2.32
1756 2193 1.537202 GAAACTCCACGCTTGAGCAAT 59.463 47.619 3.65 0.00 42.21 3.56
1757 2194 0.944386 GAAACTCCACGCTTGAGCAA 59.056 50.000 3.65 0.00 42.21 3.91
1758 2195 0.179059 TGAAACTCCACGCTTGAGCA 60.179 50.000 3.65 0.00 42.21 4.26
1759 2196 1.160137 ATGAAACTCCACGCTTGAGC 58.840 50.000 0.00 0.00 32.98 4.26
1760 2197 5.551760 AAATATGAAACTCCACGCTTGAG 57.448 39.130 0.00 0.00 35.92 3.02
1761 2198 5.106317 GGAAAATATGAAACTCCACGCTTGA 60.106 40.000 0.00 0.00 0.00 3.02
1762 2199 5.095490 GGAAAATATGAAACTCCACGCTTG 58.905 41.667 0.00 0.00 0.00 4.01
1763 2200 5.010282 AGGAAAATATGAAACTCCACGCTT 58.990 37.500 0.00 0.00 0.00 4.68
1764 2201 4.589908 AGGAAAATATGAAACTCCACGCT 58.410 39.130 0.00 0.00 0.00 5.07
1765 2202 4.201920 GGAGGAAAATATGAAACTCCACGC 60.202 45.833 0.00 0.00 43.02 5.34
1766 2203 4.941263 TGGAGGAAAATATGAAACTCCACG 59.059 41.667 12.77 0.00 46.79 4.94
1769 2206 4.335594 CCGTGGAGGAAAATATGAAACTCC 59.664 45.833 0.00 0.00 45.00 3.85
1770 2207 4.941873 ACCGTGGAGGAAAATATGAAACTC 59.058 41.667 0.00 0.00 45.00 3.01
1771 2208 4.700213 CACCGTGGAGGAAAATATGAAACT 59.300 41.667 0.00 0.00 45.00 2.66
1772 2209 4.142469 CCACCGTGGAGGAAAATATGAAAC 60.142 45.833 12.68 0.00 45.00 2.78
1773 2210 4.013728 CCACCGTGGAGGAAAATATGAAA 58.986 43.478 12.68 0.00 45.00 2.69
1774 2211 3.264706 TCCACCGTGGAGGAAAATATGAA 59.735 43.478 16.73 0.00 42.67 2.57
1775 2212 2.841266 TCCACCGTGGAGGAAAATATGA 59.159 45.455 16.73 0.00 42.67 2.15
1776 2213 3.275617 TCCACCGTGGAGGAAAATATG 57.724 47.619 16.73 0.00 42.67 1.78
1786 2223 1.973281 GACCGTACTCCACCGTGGA 60.973 63.158 19.39 19.39 45.98 4.02
1787 2224 2.209064 CTGACCGTACTCCACCGTGG 62.209 65.000 11.73 11.73 39.43 4.94
1788 2225 1.211969 CTGACCGTACTCCACCGTG 59.788 63.158 0.00 0.00 0.00 4.94
1789 2226 1.228367 ACTGACCGTACTCCACCGT 60.228 57.895 0.00 0.00 0.00 4.83
1790 2227 1.239296 TGACTGACCGTACTCCACCG 61.239 60.000 0.00 0.00 0.00 4.94
1791 2228 0.963962 TTGACTGACCGTACTCCACC 59.036 55.000 0.00 0.00 0.00 4.61
1792 2229 2.029290 ACATTGACTGACCGTACTCCAC 60.029 50.000 0.00 0.00 0.00 4.02
1793 2230 2.244695 ACATTGACTGACCGTACTCCA 58.755 47.619 0.00 0.00 0.00 3.86
1794 2231 4.445452 TTACATTGACTGACCGTACTCC 57.555 45.455 0.00 0.00 0.00 3.85
1795 2232 6.672357 GCAATTTACATTGACTGACCGTACTC 60.672 42.308 5.78 0.00 42.35 2.59
1796 2233 5.121768 GCAATTTACATTGACTGACCGTACT 59.878 40.000 5.78 0.00 42.35 2.73
1797 2234 5.121768 AGCAATTTACATTGACTGACCGTAC 59.878 40.000 5.78 0.00 42.35 3.67
1798 2235 5.242434 AGCAATTTACATTGACTGACCGTA 58.758 37.500 5.78 0.00 42.35 4.02
1799 2236 4.072131 AGCAATTTACATTGACTGACCGT 58.928 39.130 5.78 0.00 42.35 4.83
1800 2237 4.685169 AGCAATTTACATTGACTGACCG 57.315 40.909 5.78 0.00 42.35 4.79
1801 2238 7.023575 CACTTAGCAATTTACATTGACTGACC 58.976 38.462 5.78 0.00 42.35 4.02
1802 2239 6.524586 GCACTTAGCAATTTACATTGACTGAC 59.475 38.462 5.78 0.00 42.35 3.51
1803 2240 6.611381 GCACTTAGCAATTTACATTGACTGA 58.389 36.000 5.78 0.00 42.35 3.41
1804 2241 6.859715 GCACTTAGCAATTTACATTGACTG 57.140 37.500 5.78 0.00 42.35 3.51
1851 2717 7.280205 CCACTAAAATCAATCTAACGGTTAGCT 59.720 37.037 20.49 10.35 33.23 3.32
1894 2760 6.370593 CACAAAGCGTACACAGTTTCAATAT 58.629 36.000 0.00 0.00 0.00 1.28
1902 2768 0.534203 CCCCACAAAGCGTACACAGT 60.534 55.000 0.00 0.00 0.00 3.55
1978 2844 4.773323 AACCGTGAAGTAGTACAGGTAC 57.227 45.455 2.52 1.33 36.35 3.34
1979 2845 6.892658 TTTAACCGTGAAGTAGTACAGGTA 57.107 37.500 2.52 0.00 0.00 3.08
1981 2847 6.479660 TGTTTTTAACCGTGAAGTAGTACAGG 59.520 38.462 2.52 0.76 0.00 4.00
1982 2848 7.467557 TGTTTTTAACCGTGAAGTAGTACAG 57.532 36.000 2.52 0.00 0.00 2.74
1983 2849 7.332926 TGTTGTTTTTAACCGTGAAGTAGTACA 59.667 33.333 2.52 0.00 0.00 2.90
1985 2851 7.840342 TGTTGTTTTTAACCGTGAAGTAGTA 57.160 32.000 0.00 0.00 0.00 1.82
1987 2853 7.245604 AGTTGTTGTTTTTAACCGTGAAGTAG 58.754 34.615 0.00 0.00 0.00 2.57
1988 2854 7.143514 AGTTGTTGTTTTTAACCGTGAAGTA 57.856 32.000 0.00 0.00 0.00 2.24
1989 2855 6.016213 AGTTGTTGTTTTTAACCGTGAAGT 57.984 33.333 0.00 0.00 0.00 3.01
1991 2857 6.921857 TGAAAGTTGTTGTTTTTAACCGTGAA 59.078 30.769 0.00 0.00 0.00 3.18
1994 2860 7.565848 GTTTGAAAGTTGTTGTTTTTAACCGT 58.434 30.769 0.00 0.00 0.00 4.83
2001 2867 9.790389 TGTATATCGTTTGAAAGTTGTTGTTTT 57.210 25.926 0.00 0.00 0.00 2.43
2002 2868 9.790389 TTGTATATCGTTTGAAAGTTGTTGTTT 57.210 25.926 0.00 0.00 0.00 2.83
2003 2869 9.445786 CTTGTATATCGTTTGAAAGTTGTTGTT 57.554 29.630 0.00 0.00 0.00 2.83
2005 2871 7.060633 GCCTTGTATATCGTTTGAAAGTTGTTG 59.939 37.037 0.00 0.00 0.00 3.33
2006 2872 7.081976 GCCTTGTATATCGTTTGAAAGTTGTT 58.918 34.615 0.00 0.00 0.00 2.83
2007 2873 6.349033 GGCCTTGTATATCGTTTGAAAGTTGT 60.349 38.462 0.00 0.00 0.00 3.32
2008 2874 6.027749 GGCCTTGTATATCGTTTGAAAGTTG 58.972 40.000 0.00 0.00 0.00 3.16
2009 2875 5.708230 TGGCCTTGTATATCGTTTGAAAGTT 59.292 36.000 3.32 0.00 0.00 2.66
2010 2876 5.250200 TGGCCTTGTATATCGTTTGAAAGT 58.750 37.500 3.32 0.00 0.00 2.66
2013 2879 5.492895 TCTTGGCCTTGTATATCGTTTGAA 58.507 37.500 3.32 0.00 0.00 2.69
2014 2880 5.092554 TCTTGGCCTTGTATATCGTTTGA 57.907 39.130 3.32 0.00 0.00 2.69
2016 2882 4.275936 GCATCTTGGCCTTGTATATCGTTT 59.724 41.667 3.32 0.00 0.00 3.60
2017 2883 3.815401 GCATCTTGGCCTTGTATATCGTT 59.185 43.478 3.32 0.00 0.00 3.85
2018 2884 3.181455 TGCATCTTGGCCTTGTATATCGT 60.181 43.478 3.32 0.00 0.00 3.73
2020 2886 6.176183 AGTATGCATCTTGGCCTTGTATATC 58.824 40.000 0.19 2.42 0.00 1.63
2021 2887 6.131972 AGTATGCATCTTGGCCTTGTATAT 57.868 37.500 0.19 0.00 0.00 0.86
2022 2888 5.567037 AGTATGCATCTTGGCCTTGTATA 57.433 39.130 0.19 3.48 0.00 1.47
2025 2891 2.814805 AGTATGCATCTTGGCCTTGT 57.185 45.000 0.19 0.00 0.00 3.16
2026 2892 4.077300 TCTAGTATGCATCTTGGCCTTG 57.923 45.455 0.19 0.00 0.00 3.61
2027 2893 4.778213 TTCTAGTATGCATCTTGGCCTT 57.222 40.909 0.19 0.00 0.00 4.35
2028 2894 4.649692 CATTCTAGTATGCATCTTGGCCT 58.350 43.478 0.19 0.00 0.00 5.19
2039 2905 6.870965 GGTAACATCCAGAGCATTCTAGTATG 59.129 42.308 5.04 5.04 30.73 2.39
2040 2906 6.554982 TGGTAACATCCAGAGCATTCTAGTAT 59.445 38.462 0.00 0.00 46.17 2.12
2041 2907 5.897250 TGGTAACATCCAGAGCATTCTAGTA 59.103 40.000 0.00 0.00 46.17 1.82
2042 2908 4.716784 TGGTAACATCCAGAGCATTCTAGT 59.283 41.667 0.00 0.00 46.17 2.57
2043 2909 5.282055 TGGTAACATCCAGAGCATTCTAG 57.718 43.478 0.00 0.00 46.17 2.43
2058 2924 9.482627 GCTACTTCAAGTTGCTGTTTGGTAACA 62.483 40.741 15.76 0.00 43.63 2.41
2060 2926 5.220970 GCTACTTCAAGTTGCTGTTTGGTAA 60.221 40.000 15.76 0.00 42.32 2.85
2062 2928 3.066760 GCTACTTCAAGTTGCTGTTTGGT 59.933 43.478 15.76 0.00 42.32 3.67
2063 2929 3.066621 TGCTACTTCAAGTTGCTGTTTGG 59.933 43.478 22.08 0.00 45.07 3.28
2064 2930 4.291540 TGCTACTTCAAGTTGCTGTTTG 57.708 40.909 22.08 0.00 45.07 2.93
2065 2931 4.981806 TTGCTACTTCAAGTTGCTGTTT 57.018 36.364 22.08 0.00 45.07 2.83
2066 2932 4.640201 TCTTTGCTACTTCAAGTTGCTGTT 59.360 37.500 22.08 0.00 45.07 3.16
2067 2933 4.199310 TCTTTGCTACTTCAAGTTGCTGT 58.801 39.130 22.08 2.10 45.07 4.40
2068 2934 4.512944 TCTCTTTGCTACTTCAAGTTGCTG 59.487 41.667 22.08 13.34 45.07 4.41
2069 2935 4.708177 TCTCTTTGCTACTTCAAGTTGCT 58.292 39.130 22.08 0.00 45.07 3.91
2070 2936 5.619625 ATCTCTTTGCTACTTCAAGTTGC 57.380 39.130 16.12 16.12 45.06 4.17
2072 2938 5.784177 TCGATCTCTTTGCTACTTCAAGTT 58.216 37.500 0.00 0.00 0.00 2.66
2074 2940 6.975197 TGTATCGATCTCTTTGCTACTTCAAG 59.025 38.462 0.00 0.00 0.00 3.02
2075 2941 6.863275 TGTATCGATCTCTTTGCTACTTCAA 58.137 36.000 0.00 0.00 0.00 2.69
2077 2943 7.757097 TTTGTATCGATCTCTTTGCTACTTC 57.243 36.000 0.00 0.00 0.00 3.01
2100 2966 8.814038 ATGTATGGATCTCTTTGCTACTTTTT 57.186 30.769 0.00 0.00 0.00 1.94
2101 2967 9.331282 GTATGTATGGATCTCTTTGCTACTTTT 57.669 33.333 0.00 0.00 0.00 2.27
2102 2968 8.486210 TGTATGTATGGATCTCTTTGCTACTTT 58.514 33.333 0.00 0.00 0.00 2.66
2103 2969 8.023021 TGTATGTATGGATCTCTTTGCTACTT 57.977 34.615 0.00 0.00 0.00 2.24
2104 2970 7.603180 TGTATGTATGGATCTCTTTGCTACT 57.397 36.000 0.00 0.00 0.00 2.57
2105 2971 8.662781 TTTGTATGTATGGATCTCTTTGCTAC 57.337 34.615 0.00 0.00 0.00 3.58
2108 2974 9.277783 ACTATTTGTATGTATGGATCTCTTTGC 57.722 33.333 0.00 0.00 0.00 3.68
2114 2980 9.036980 GGGAGTACTATTTGTATGTATGGATCT 57.963 37.037 0.00 0.00 33.23 2.75
2115 2981 9.036980 AGGGAGTACTATTTGTATGTATGGATC 57.963 37.037 0.00 0.00 33.23 3.36
2116 2982 8.974292 AGGGAGTACTATTTGTATGTATGGAT 57.026 34.615 0.00 0.00 33.23 3.41
2117 2983 7.453752 GGAGGGAGTACTATTTGTATGTATGGA 59.546 40.741 0.00 0.00 33.23 3.41
2118 2984 7.577046 CGGAGGGAGTACTATTTGTATGTATGG 60.577 44.444 0.00 0.00 33.23 2.74
2119 2985 7.039923 ACGGAGGGAGTACTATTTGTATGTATG 60.040 40.741 0.00 0.00 33.23 2.39
2121 2987 6.367983 ACGGAGGGAGTACTATTTGTATGTA 58.632 40.000 0.00 0.00 33.23 2.29
2122 2988 5.206587 ACGGAGGGAGTACTATTTGTATGT 58.793 41.667 0.00 0.00 33.23 2.29
2123 2989 5.786264 ACGGAGGGAGTACTATTTGTATG 57.214 43.478 0.00 0.00 33.23 2.39
2124 2990 5.303845 GGAACGGAGGGAGTACTATTTGTAT 59.696 44.000 0.00 0.00 33.23 2.29
2125 2991 4.646492 GGAACGGAGGGAGTACTATTTGTA 59.354 45.833 0.00 0.00 0.00 2.41
2126 2992 3.450096 GGAACGGAGGGAGTACTATTTGT 59.550 47.826 0.00 0.00 0.00 2.83
2127 2993 3.705072 AGGAACGGAGGGAGTACTATTTG 59.295 47.826 0.00 0.00 0.00 2.32
2128 2994 3.991683 AGGAACGGAGGGAGTACTATTT 58.008 45.455 0.00 0.00 0.00 1.40
2129 2995 3.684408 AGGAACGGAGGGAGTACTATT 57.316 47.619 0.00 0.00 0.00 1.73
2130 2996 4.803329 TTAGGAACGGAGGGAGTACTAT 57.197 45.455 0.00 0.00 0.00 2.12
2131 2997 4.591321 TTTAGGAACGGAGGGAGTACTA 57.409 45.455 0.00 0.00 0.00 1.82
2132 2998 3.463048 TTTAGGAACGGAGGGAGTACT 57.537 47.619 0.00 0.00 0.00 2.73
2133 2999 4.892345 AGTATTTAGGAACGGAGGGAGTAC 59.108 45.833 0.00 0.00 0.00 2.73
2134 3000 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
2135 3001 3.991683 AGTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
2136 3002 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
2137 3003 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
2138 3004 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
2139 3005 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
2140 3006 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
2141 3007 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
2142 3008 7.491696 CCTAGAAAGACAAGTATTTAGGAACGG 59.508 40.741 4.01 0.00 26.70 4.44
2143 3009 7.010275 GCCTAGAAAGACAAGTATTTAGGAACG 59.990 40.741 11.40 0.00 26.70 3.95
2144 3010 7.822822 TGCCTAGAAAGACAAGTATTTAGGAAC 59.177 37.037 11.40 0.00 26.70 3.62
2146 3012 7.490657 TGCCTAGAAAGACAAGTATTTAGGA 57.509 36.000 11.40 0.00 26.70 2.94
2149 3015 9.733556 TGAAATGCCTAGAAAGACAAGTATTTA 57.266 29.630 0.00 0.00 0.00 1.40
2150 3016 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
2155 3021 6.317789 TGTTGAAATGCCTAGAAAGACAAG 57.682 37.500 0.00 0.00 0.00 3.16
2156 3022 6.321181 ACTTGTTGAAATGCCTAGAAAGACAA 59.679 34.615 0.00 0.00 0.00 3.18
2157 3023 5.827797 ACTTGTTGAAATGCCTAGAAAGACA 59.172 36.000 0.00 0.00 0.00 3.41
2158 3024 6.017109 TCACTTGTTGAAATGCCTAGAAAGAC 60.017 38.462 0.00 0.00 0.00 3.01
2159 3025 6.017109 GTCACTTGTTGAAATGCCTAGAAAGA 60.017 38.462 0.00 0.00 35.39 2.52
2161 3027 5.827797 AGTCACTTGTTGAAATGCCTAGAAA 59.172 36.000 0.00 0.00 35.39 2.52
2162 3028 5.376625 AGTCACTTGTTGAAATGCCTAGAA 58.623 37.500 0.00 0.00 35.39 2.10
2163 3029 4.973168 AGTCACTTGTTGAAATGCCTAGA 58.027 39.130 0.00 0.00 35.39 2.43
2165 3031 5.616270 TGTAGTCACTTGTTGAAATGCCTA 58.384 37.500 0.00 0.00 35.39 3.93
2166 3032 4.460263 TGTAGTCACTTGTTGAAATGCCT 58.540 39.130 0.00 0.00 35.39 4.75
2168 3034 6.015504 CGTATGTAGTCACTTGTTGAAATGC 58.984 40.000 0.00 0.00 35.39 3.56
2169 3035 6.367695 TCCGTATGTAGTCACTTGTTGAAATG 59.632 38.462 0.00 0.00 35.39 2.32
2171 3037 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
2174 3040 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
2175 3041 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
2176 3042 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
2177 3043 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
2178 3044 4.021368 ACTTTGCTCCGTATGTAGTCACTT 60.021 41.667 0.00 0.00 0.00 3.16
2179 3045 3.510360 ACTTTGCTCCGTATGTAGTCACT 59.490 43.478 0.00 0.00 0.00 3.41
2180 3046 3.846360 ACTTTGCTCCGTATGTAGTCAC 58.154 45.455 0.00 0.00 0.00 3.67
2182 3048 6.755141 TCATTTACTTTGCTCCGTATGTAGTC 59.245 38.462 0.00 0.00 0.00 2.59
2184 3050 7.534085 TTCATTTACTTTGCTCCGTATGTAG 57.466 36.000 0.00 0.00 0.00 2.74
2186 3052 6.823689 AGATTCATTTACTTTGCTCCGTATGT 59.176 34.615 0.00 0.00 0.00 2.29
2188 3054 6.238484 GCAGATTCATTTACTTTGCTCCGTAT 60.238 38.462 0.00 0.00 0.00 3.06
2189 3055 5.064707 GCAGATTCATTTACTTTGCTCCGTA 59.935 40.000 0.00 0.00 0.00 4.02
2191 3057 4.142622 TGCAGATTCATTTACTTTGCTCCG 60.143 41.667 0.00 0.00 0.00 4.63
2193 3059 5.947443 AGTGCAGATTCATTTACTTTGCTC 58.053 37.500 0.00 0.00 0.00 4.26
2194 3060 5.709164 AGAGTGCAGATTCATTTACTTTGCT 59.291 36.000 0.00 0.00 0.00 3.91
2195 3061 5.947443 AGAGTGCAGATTCATTTACTTTGC 58.053 37.500 0.00 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.