Multiple sequence alignment - TraesCS4B01G314000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G314000 chr4B 100.000 7584 0 0 1 7584 604054627 604047044 0.000000e+00 14006.0
1 TraesCS4B01G314000 chr4B 98.381 247 4 0 5344 5590 408980978 408980732 1.170000e-117 435.0
2 TraesCS4B01G314000 chr4B 97.638 254 5 1 5343 5596 408982387 408982135 1.170000e-117 435.0
3 TraesCS4B01G314000 chr4B 95.541 157 4 1 1652 1805 324329403 324329247 1.630000e-61 248.0
4 TraesCS4B01G314000 chr4B 87.864 206 13 5 1218 1416 324329628 324329428 1.650000e-56 231.0
5 TraesCS4B01G314000 chr4D 95.219 4915 166 36 120 5017 477897551 477892689 0.000000e+00 7710.0
6 TraesCS4B01G314000 chr4D 91.604 1060 51 10 5773 6797 477892196 477891140 0.000000e+00 1430.0
7 TraesCS4B01G314000 chr4D 88.533 375 17 11 6973 7334 477891019 477890658 1.510000e-116 431.0
8 TraesCS4B01G314000 chr4D 89.796 294 20 5 5050 5343 477892691 477892408 1.200000e-97 368.0
9 TraesCS4B01G314000 chr4D 93.519 216 14 0 5590 5805 477892412 477892197 9.490000e-84 322.0
10 TraesCS4B01G314000 chr4D 96.094 128 5 0 6754 6881 477891143 477891016 7.710000e-50 209.0
11 TraesCS4B01G314000 chr4A 93.234 3976 167 30 1402 5343 684589038 684585131 0.000000e+00 5758.0
12 TraesCS4B01G314000 chr4A 88.555 1398 98 29 1 1372 684590381 684589020 0.000000e+00 1639.0
13 TraesCS4B01G314000 chr4A 90.746 1167 70 19 5593 6726 684585132 684583971 0.000000e+00 1522.0
14 TraesCS4B01G314000 chr4A 92.424 330 11 4 7006 7334 684583944 684583628 6.930000e-125 459.0
15 TraesCS4B01G314000 chr4A 89.011 91 10 0 4924 5014 471931242 471931332 6.220000e-21 113.0
16 TraesCS4B01G314000 chr4A 88.889 90 9 1 4927 5015 85905017 85904928 8.050000e-20 110.0
17 TraesCS4B01G314000 chr1A 96.907 291 9 0 3526 3816 41753252 41752962 8.840000e-134 488.0
18 TraesCS4B01G314000 chr1A 87.500 112 12 2 6875 6986 340014999 340015108 2.220000e-25 128.0
19 TraesCS4B01G314000 chr5B 98.031 254 5 0 7331 7584 459570856 459571109 6.980000e-120 442.0
20 TraesCS4B01G314000 chr5B 87.069 116 11 4 6871 6984 693877786 693877673 2.220000e-25 128.0
21 TraesCS4B01G314000 chr7A 97.308 260 6 1 7325 7584 627156425 627156683 2.510000e-119 440.0
22 TraesCS4B01G314000 chr7A 96.552 261 8 1 7324 7584 620197325 620197066 1.510000e-116 431.0
23 TraesCS4B01G314000 chr6A 98.024 253 5 0 7332 7584 38758093 38757841 2.510000e-119 440.0
24 TraesCS4B01G314000 chr6A 97.638 254 6 0 7331 7584 371732392 371732645 3.250000e-118 436.0
25 TraesCS4B01G314000 chr6A 92.500 80 6 0 4935 5014 14351067 14350988 1.730000e-21 115.0
26 TraesCS4B01G314000 chr6A 100.000 44 0 0 1167 1210 52216302 52216259 1.750000e-11 82.4
27 TraesCS4B01G314000 chr2B 98.024 253 5 0 7332 7584 11723877 11723625 2.510000e-119 440.0
28 TraesCS4B01G314000 chr2B 82.934 334 33 14 1096 1416 125495848 125495526 5.790000e-71 279.0
29 TraesCS4B01G314000 chr2B 89.873 79 8 0 1640 1718 125495513 125495435 1.350000e-17 102.0
30 TraesCS4B01G314000 chr6B 97.287 258 5 1 5336 5591 124083261 124083518 3.250000e-118 436.0
31 TraesCS4B01G314000 chr6B 98.008 251 4 1 5344 5593 346316905 346316655 1.170000e-117 435.0
32 TraesCS4B01G314000 chr6B 97.276 257 5 2 5340 5596 346318334 346318080 1.170000e-117 435.0
33 TraesCS4B01G314000 chr6B 97.628 253 5 1 5344 5596 124081339 124081590 4.200000e-117 433.0
34 TraesCS4B01G314000 chr3B 97.638 254 6 0 7331 7584 679723212 679723465 3.250000e-118 436.0
35 TraesCS4B01G314000 chr1B 98.387 248 4 0 5343 5590 641496443 641496196 3.250000e-118 436.0
36 TraesCS4B01G314000 chr1B 97.276 257 5 1 5336 5590 141119628 141119884 1.170000e-117 435.0
37 TraesCS4B01G314000 chr1B 96.154 260 9 1 5337 5596 141116914 141117172 2.530000e-114 424.0
38 TraesCS4B01G314000 chr1B 89.344 122 9 2 1688 1805 44977753 44977632 4.740000e-32 150.0
39 TraesCS4B01G314000 chr1B 90.476 105 8 1 6875 6977 341377973 341377869 3.690000e-28 137.0
40 TraesCS4B01G314000 chr1B 88.679 106 12 0 6876 6981 350726908 350726803 6.180000e-26 130.0
41 TraesCS4B01G314000 chr3A 96.863 255 8 0 7330 7584 673863753 673863499 1.960000e-115 427.0
42 TraesCS4B01G314000 chr1D 95.185 270 11 2 7317 7584 52666991 52666722 7.030000e-115 425.0
43 TraesCS4B01G314000 chr6D 85.671 328 28 10 1096 1416 19273326 19273011 2.040000e-85 327.0
44 TraesCS4B01G314000 chr6D 93.491 169 8 1 1640 1805 19272998 19272830 1.630000e-61 248.0
45 TraesCS4B01G314000 chr6D 92.683 82 5 1 4935 5015 131940434 131940515 4.810000e-22 117.0
46 TraesCS4B01G314000 chrUn 96.450 169 3 1 1640 1805 143930212 143930380 7.500000e-70 276.0
47 TraesCS4B01G314000 chr2D 93.491 169 8 1 1640 1805 362320107 362320275 1.630000e-61 248.0
48 TraesCS4B01G314000 chr2D 85.586 222 19 9 1092 1308 41850852 41851065 3.560000e-53 220.0
49 TraesCS4B01G314000 chr2D 81.463 205 19 10 1096 1298 392353530 392353717 4.740000e-32 150.0
50 TraesCS4B01G314000 chr2D 91.000 100 9 0 6875 6974 263505051 263505150 1.330000e-27 135.0
51 TraesCS4B01G314000 chr2D 87.500 112 12 2 6872 6982 98693495 98693605 2.220000e-25 128.0
52 TraesCS4B01G314000 chr7B 91.753 97 8 0 6878 6974 727421709 727421805 1.330000e-27 135.0
53 TraesCS4B01G314000 chr7B 91.579 95 8 0 6878 6972 665395533 665395439 1.720000e-26 132.0
54 TraesCS4B01G314000 chr7B 87.963 108 11 2 6875 6981 193955950 193955844 7.990000e-25 126.0
55 TraesCS4B01G314000 chr3D 92.683 82 4 2 4935 5015 108916341 108916261 4.810000e-22 117.0
56 TraesCS4B01G314000 chr3D 97.674 43 1 0 1168 1210 460727372 460727330 2.940000e-09 75.0
57 TraesCS4B01G314000 chr5A 87.037 108 6 6 4921 5021 521937811 521937917 1.730000e-21 115.0
58 TraesCS4B01G314000 chr5D 85.849 106 8 6 4921 5021 410399104 410399207 1.040000e-18 106.0
59 TraesCS4B01G314000 chr5D 95.745 47 2 0 1164 1210 238195671 238195717 8.160000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G314000 chr4B 604047044 604054627 7583 True 14006.0 14006 100.000000 1 7584 1 chr4B.!!$R1 7583
1 TraesCS4B01G314000 chr4B 408980732 408982387 1655 True 435.0 435 98.009500 5343 5596 2 chr4B.!!$R3 253
2 TraesCS4B01G314000 chr4D 477890658 477897551 6893 True 1745.0 7710 92.460833 120 7334 6 chr4D.!!$R1 7214
3 TraesCS4B01G314000 chr4A 684583628 684590381 6753 True 2344.5 5758 91.239750 1 7334 4 chr4A.!!$R2 7333
4 TraesCS4B01G314000 chr6B 346316655 346318334 1679 True 435.0 435 97.642000 5340 5596 2 chr6B.!!$R1 256
5 TraesCS4B01G314000 chr6B 124081339 124083518 2179 False 434.5 436 97.457500 5336 5596 2 chr6B.!!$F1 260
6 TraesCS4B01G314000 chr1B 141116914 141119884 2970 False 429.5 435 96.715000 5336 5596 2 chr1B.!!$F1 260

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
445 455 0.320374 TCTTGGCGATCGACCAAAGT 59.680 50.0 30.23 0.00 46.24 2.66 F
1826 1889 0.593618 TTTTGTGTGTGTGTGTGCGT 59.406 45.0 0.00 0.00 0.00 5.24 F
1828 1891 1.231296 TTGTGTGTGTGTGTGCGTGT 61.231 50.0 0.00 0.00 0.00 4.49 F
2695 2779 0.165944 GCACGAGTTTTCATGGTCGG 59.834 55.0 0.00 0.00 36.74 4.79 F
3085 3169 0.600782 CACCAGGGCAAATGCAACAC 60.601 55.0 7.80 0.00 44.36 3.32 F
4397 4483 0.466963 ATGCATCATCAGGTCTGCGA 59.533 50.0 0.00 0.00 37.44 5.10 F
5150 5240 0.167689 GAAGCAGCTGTAGCAAGTGC 59.832 55.0 16.64 7.48 45.16 4.40 F
5665 5755 0.804364 TGCGTGATAGCCTTTTGCAG 59.196 50.0 0.00 0.00 44.83 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2094 2157 0.106217 CCTGTCCTCTCTCTCCCTCC 60.106 65.000 0.0 0.0 0.00 4.30 R
2677 2761 0.796312 CCCGACCATGAAAACTCGTG 59.204 55.000 0.0 0.0 0.00 4.35 R
3115 3199 1.273324 ACACCAGGTAGAAGAGGAGGG 60.273 57.143 0.0 0.0 0.00 4.30 R
4080 4165 1.741028 TTTGGGGAGGACACATGAGA 58.259 50.000 0.0 0.0 0.00 3.27 R
4877 4967 0.322816 TCCTTCCACAAGCCAGATGC 60.323 55.000 0.0 0.0 41.71 3.91 R
5647 5737 1.086696 TCTGCAAAAGGCTATCACGC 58.913 50.000 0.0 0.0 45.15 5.34 R
6308 6436 1.152567 CCTGAGCCCCTCGATCTCT 60.153 63.158 0.0 0.0 32.35 3.10 R
7448 7664 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.0 0.0 0.00 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 91 5.722263 TGCATGGATTTTCGTGATCATTTT 58.278 33.333 0.00 0.00 0.00 1.82
226 232 1.510480 GAGCAACCTGGTCAGCACAC 61.510 60.000 21.47 11.44 43.79 3.82
228 234 1.152984 CAACCTGGTCAGCACACCA 60.153 57.895 0.00 6.61 44.69 4.17
229 235 1.152963 AACCTGGTCAGCACACCAC 60.153 57.895 0.00 0.00 41.84 4.16
230 236 1.920734 AACCTGGTCAGCACACCACA 61.921 55.000 0.00 0.00 41.84 4.17
237 243 1.532868 GTCAGCACACCACAGAATCAC 59.467 52.381 0.00 0.00 0.00 3.06
259 265 5.468072 CACTGAGTATGGATTGCAGGATAAC 59.532 44.000 0.00 0.00 0.00 1.89
445 455 0.320374 TCTTGGCGATCGACCAAAGT 59.680 50.000 30.23 0.00 46.24 2.66
635 645 9.605275 GAATTATGCAGCTAATATAGTGGATGA 57.395 33.333 5.96 0.00 0.00 2.92
636 646 8.954950 ATTATGCAGCTAATATAGTGGATGAC 57.045 34.615 5.96 0.00 0.00 3.06
717 730 4.678309 CGAGGCTCTTACCGAGAAATCTTT 60.678 45.833 13.50 0.00 42.62 2.52
718 731 5.167303 AGGCTCTTACCGAGAAATCTTTT 57.833 39.130 0.00 0.00 42.62 2.27
719 732 5.179533 AGGCTCTTACCGAGAAATCTTTTC 58.820 41.667 0.00 0.00 42.62 2.29
849 871 2.332654 GCGGCGGATGGTTTGAGTT 61.333 57.895 9.78 0.00 0.00 3.01
965 989 6.624204 GCCTCTCTTCTGTACTAGTTCTGTTC 60.624 46.154 0.00 0.00 0.00 3.18
1158 1186 2.507102 GAAGCTGCTCGCGTGCTA 60.507 61.111 30.29 17.30 45.59 3.49
1159 1187 1.880340 GAAGCTGCTCGCGTGCTAT 60.880 57.895 30.29 15.41 45.59 2.97
1210 1241 2.168313 TGTGCGGCTATGAAATCTCTCA 59.832 45.455 0.00 0.00 0.00 3.27
1381 1414 2.741486 TTTAGGGAGTGTGCCGGTGC 62.741 60.000 1.90 0.00 30.73 5.01
1535 1597 0.769247 GGTGGTGGGTAGGTGACTTT 59.231 55.000 0.00 0.00 43.67 2.66
1591 1654 4.082463 ACTTGTTATTTTGGTGGTATGCCG 60.082 41.667 0.00 0.00 37.67 5.69
1735 1798 9.326413 CTACACTTCGGTTTCCATCTATTTAAT 57.674 33.333 0.00 0.00 0.00 1.40
1825 1888 1.691127 TTTTTGTGTGTGTGTGTGCG 58.309 45.000 0.00 0.00 0.00 5.34
1826 1889 0.593618 TTTTGTGTGTGTGTGTGCGT 59.406 45.000 0.00 0.00 0.00 5.24
1828 1891 1.231296 TTGTGTGTGTGTGTGCGTGT 61.231 50.000 0.00 0.00 0.00 4.49
1948 2011 6.829229 TCTCAACTCGGTTGTAATCTTAGA 57.171 37.500 13.95 7.10 43.23 2.10
1962 2025 8.001881 TGTAATCTTAGAAAGAGAGGTAGCAG 57.998 38.462 0.00 0.00 41.61 4.24
2077 2140 3.604582 GAGAAGTCCTGATGGTTCCAAG 58.395 50.000 0.00 0.00 34.23 3.61
2079 2142 2.044793 AGTCCTGATGGTTCCAAGGA 57.955 50.000 7.87 7.87 34.23 3.36
2080 2143 2.566746 AGTCCTGATGGTTCCAAGGAT 58.433 47.619 13.37 3.46 34.23 3.24
2081 2144 3.736094 AGTCCTGATGGTTCCAAGGATA 58.264 45.455 13.37 0.00 34.23 2.59
2082 2145 3.713764 AGTCCTGATGGTTCCAAGGATAG 59.286 47.826 13.37 1.63 34.23 2.08
2083 2146 3.048600 TCCTGATGGTTCCAAGGATAGG 58.951 50.000 7.87 6.19 34.23 2.57
2085 2148 3.048600 CTGATGGTTCCAAGGATAGGGA 58.951 50.000 0.00 0.00 0.00 4.20
2086 2149 3.654806 CTGATGGTTCCAAGGATAGGGAT 59.345 47.826 0.00 0.00 32.15 3.85
2087 2150 4.054369 TGATGGTTCCAAGGATAGGGATT 58.946 43.478 0.00 0.00 32.15 3.01
2089 2152 4.965283 TGGTTCCAAGGATAGGGATTTT 57.035 40.909 0.00 0.00 32.15 1.82
2091 2154 4.293634 TGGTTCCAAGGATAGGGATTTTGA 59.706 41.667 0.00 0.00 32.15 2.69
2092 2155 5.043432 TGGTTCCAAGGATAGGGATTTTGAT 60.043 40.000 0.00 0.00 32.15 2.57
2093 2156 6.161348 TGGTTCCAAGGATAGGGATTTTGATA 59.839 38.462 0.00 0.00 32.15 2.15
2094 2157 6.717084 GGTTCCAAGGATAGGGATTTTGATAG 59.283 42.308 0.00 0.00 32.15 2.08
2095 2158 6.454223 TCCAAGGATAGGGATTTTGATAGG 57.546 41.667 0.00 0.00 0.00 2.57
2097 2160 6.273260 TCCAAGGATAGGGATTTTGATAGGAG 59.727 42.308 0.00 0.00 0.00 3.69
2107 2191 5.245977 GGATTTTGATAGGAGGGAGAGAGAG 59.754 48.000 0.00 0.00 0.00 3.20
2245 2329 2.710902 CCACGCAGATGAGTCGGGA 61.711 63.158 0.00 0.00 0.00 5.14
2449 2533 2.025793 TGGTGTGGAAAAAGTGGAGACA 60.026 45.455 0.00 0.00 38.70 3.41
2600 2684 3.055819 GGTTGAAGGATCTGAGCAGTACA 60.056 47.826 0.00 0.00 0.00 2.90
2601 2685 4.180057 GTTGAAGGATCTGAGCAGTACAG 58.820 47.826 0.00 0.00 36.80 2.74
2602 2686 3.435275 TGAAGGATCTGAGCAGTACAGT 58.565 45.455 0.00 0.00 36.81 3.55
2677 2761 2.749621 CACACAGGAAAGGTTAGATGGC 59.250 50.000 0.00 0.00 0.00 4.40
2695 2779 0.165944 GCACGAGTTTTCATGGTCGG 59.834 55.000 0.00 0.00 36.74 4.79
2824 2908 3.745458 GCAATTTTGATTTTGGGCGAGAA 59.255 39.130 0.00 0.00 0.00 2.87
2869 2953 1.903877 ATGTGGGAGCTCCTGGAACG 61.904 60.000 31.36 0.00 36.20 3.95
3085 3169 0.600782 CACCAGGGCAAATGCAACAC 60.601 55.000 7.80 0.00 44.36 3.32
3115 3199 3.532641 AATATTCCCCATTCTCCAGGC 57.467 47.619 0.00 0.00 0.00 4.85
3383 3467 3.641648 AGCACACAAAATCGTGAAATGG 58.358 40.909 0.00 0.00 39.34 3.16
3524 3608 6.092807 GCGACCTCAAAACTTCATTAGAGAAT 59.907 38.462 0.00 0.00 0.00 2.40
3845 3929 9.657419 CTTTTTAAGGATGTTCATTTTATGCCT 57.343 29.630 0.00 0.00 0.00 4.75
3950 4034 2.037902 TGATGGCGTAGGTCTTGAACAA 59.962 45.455 0.00 0.00 0.00 2.83
3974 4058 3.500680 GCCGTCAATGTTTGAAGAAGGTA 59.499 43.478 5.00 0.00 42.15 3.08
3998 4082 7.665561 AAGACAGCTTTCTCTTTCAGTAATC 57.334 36.000 2.15 0.00 0.00 1.75
4016 4100 8.717821 TCAGTAATCTAACACATGCAGTTTTAC 58.282 33.333 9.12 11.08 0.00 2.01
4072 4157 1.630369 TGATGCCAGCTTACAGAAGGT 59.370 47.619 0.00 0.00 44.26 3.50
4080 4165 3.055530 CAGCTTACAGAAGGTCATCCAGT 60.056 47.826 0.00 0.00 41.49 4.00
4108 4193 5.893500 TGTGTCCTCCCCAAAACATTATAA 58.106 37.500 0.00 0.00 0.00 0.98
4130 4215 5.155278 ACCACAATGCATTTTGATCATGT 57.845 34.783 23.88 11.68 0.00 3.21
4186 4272 7.651304 AGTCAACTCTAATCTGCATAAATCTCG 59.349 37.037 0.00 0.00 0.00 4.04
4189 4275 5.694006 ACTCTAATCTGCATAAATCTCGCAC 59.306 40.000 0.00 0.00 0.00 5.34
4200 4286 4.590400 AAATCTCGCACTCTTTCGAATG 57.410 40.909 0.00 0.78 34.07 2.67
4201 4287 2.724977 TCTCGCACTCTTTCGAATGT 57.275 45.000 10.48 2.56 34.07 2.71
4202 4288 2.328473 TCTCGCACTCTTTCGAATGTG 58.672 47.619 16.84 16.84 34.07 3.21
4232 4318 8.806429 TCATCTGTTTCAAAAGATATAGGCAA 57.194 30.769 0.00 0.00 31.87 4.52
4315 4401 5.743117 AGATGAAGCTAGCTGAAACATCTT 58.257 37.500 29.76 18.68 39.51 2.40
4397 4483 0.466963 ATGCATCATCAGGTCTGCGA 59.533 50.000 0.00 0.00 37.44 5.10
4604 4691 3.816994 CACTGATGGTCATGTCATCCAT 58.183 45.455 20.56 16.39 43.54 3.41
4675 4762 2.959030 TCTATCTCGTAGCTGCCATTGT 59.041 45.455 0.00 0.00 0.00 2.71
4680 4767 4.513442 TCTCGTAGCTGCCATTGTTAATT 58.487 39.130 0.00 0.00 0.00 1.40
4683 4770 4.570772 TCGTAGCTGCCATTGTTAATTCTC 59.429 41.667 0.00 0.00 0.00 2.87
4734 4821 1.055849 TCTAAACTGTGCTGAGGCCA 58.944 50.000 5.01 0.00 37.74 5.36
4748 4835 2.714250 TGAGGCCACTTTTCCTTTCCTA 59.286 45.455 5.01 0.00 31.71 2.94
4808 4895 7.148000 TGTCTTTGTTGTTGTCATGGTATGAAA 60.148 33.333 0.00 0.00 41.69 2.69
4971 5061 3.859411 AAGACGTTTTGGCAGTTCAAA 57.141 38.095 0.00 0.00 35.15 2.69
4989 5079 5.250235 TCAAATTGAACTGCCAAAACGTA 57.750 34.783 0.00 0.00 0.00 3.57
5026 5116 5.012148 ACAGAGGTAGTACATCTTTGTTGCT 59.988 40.000 14.61 0.00 37.10 3.91
5086 5176 9.529325 TGAACTCTGAATATAATCCTTGTAACG 57.471 33.333 0.00 0.00 0.00 3.18
5150 5240 0.167689 GAAGCAGCTGTAGCAAGTGC 59.832 55.000 16.64 7.48 45.16 4.40
5214 5304 7.148086 GCAACCATCAAAGTATGTCCAAGATTA 60.148 37.037 0.00 0.00 0.00 1.75
5217 5307 8.328758 ACCATCAAAGTATGTCCAAGATTAGAA 58.671 33.333 0.00 0.00 0.00 2.10
5286 5376 4.887071 TGAGTGTGCACATTTAAAAGGAGT 59.113 37.500 24.69 0.00 0.00 3.85
5313 5403 3.438087 AGAGATTGCATGTGTTGTACTGC 59.562 43.478 0.00 0.00 35.42 4.40
5339 5429 4.871871 TCTTGGCATAAAGGTAATGGGA 57.128 40.909 0.00 0.00 0.00 4.37
5340 5430 5.402054 TCTTGGCATAAAGGTAATGGGAT 57.598 39.130 0.00 0.00 0.00 3.85
5341 5431 5.139727 TCTTGGCATAAAGGTAATGGGATG 58.860 41.667 0.00 0.00 0.00 3.51
5342 5432 4.534647 TGGCATAAAGGTAATGGGATGT 57.465 40.909 0.00 0.00 0.00 3.06
5360 5450 5.233689 GGGATGTTGTTAGAGTACGTAATGC 59.766 44.000 0.00 0.00 0.00 3.56
5616 5706 5.048504 GTGGAAGATGAGCAGATGTTTTTGA 60.049 40.000 0.00 0.00 0.00 2.69
5621 5711 3.466836 TGAGCAGATGTTTTTGACTCGT 58.533 40.909 0.00 0.00 0.00 4.18
5622 5712 3.248363 TGAGCAGATGTTTTTGACTCGTG 59.752 43.478 0.00 0.00 0.00 4.35
5665 5755 0.804364 TGCGTGATAGCCTTTTGCAG 59.196 50.000 0.00 0.00 44.83 4.41
5666 5756 1.086696 GCGTGATAGCCTTTTGCAGA 58.913 50.000 0.00 0.00 44.83 4.26
5667 5757 1.468520 GCGTGATAGCCTTTTGCAGAA 59.531 47.619 0.00 0.00 44.83 3.02
5675 5765 6.429078 TGATAGCCTTTTGCAGAATAGCTATG 59.571 38.462 26.24 0.00 44.83 2.23
5713 5806 8.592105 TCATTTTGGTATGCTTGAAAGAAAAG 57.408 30.769 0.00 0.00 0.00 2.27
5806 5932 5.886960 AGTTATCCATTTGTTGACAGCTC 57.113 39.130 0.00 0.00 0.00 4.09
5912 6038 7.984391 TGAAGCATAATATTCGTTTGTGATGT 58.016 30.769 0.00 0.00 0.00 3.06
6122 6248 6.017605 AGCTGGATATTCAACTTTTATGCTCG 60.018 38.462 0.00 0.00 0.00 5.03
6150 6278 3.941483 AGTGTTACACAAGAGCATATGCC 59.059 43.478 23.96 15.08 38.17 4.40
6169 6297 1.354337 CTTGCCACGATCTCCACACG 61.354 60.000 0.00 0.00 0.00 4.49
6224 6352 3.682858 TGCAGGCGTATAACAAGAACTTC 59.317 43.478 0.00 0.00 0.00 3.01
6308 6436 0.608308 ACCTGATCGTGACGACTCCA 60.608 55.000 10.91 8.08 39.18 3.86
6402 6532 0.904865 TCCATGGAGCTCGGTGAACT 60.905 55.000 11.44 0.00 0.00 3.01
6407 6537 0.667792 GGAGCTCGGTGAACTGTGAC 60.668 60.000 7.83 0.00 0.00 3.67
6424 6554 2.098614 TGACCTGTTTTCAAGCTGCAA 58.901 42.857 1.02 0.00 0.00 4.08
6425 6555 2.159254 TGACCTGTTTTCAAGCTGCAAC 60.159 45.455 1.02 0.00 0.00 4.17
6426 6556 2.099756 GACCTGTTTTCAAGCTGCAACT 59.900 45.455 1.02 0.00 0.00 3.16
6439 6569 2.669391 GCTGCAACTGTGGCTACATTTC 60.669 50.000 8.88 0.20 35.97 2.17
6734 6897 3.365265 CAGTGGCTTGCCGGTTCC 61.365 66.667 1.90 0.00 0.00 3.62
6805 7008 5.641709 TGACACAAAAATAAACTTGCACGA 58.358 33.333 0.00 0.00 0.00 4.35
6806 7009 5.513495 TGACACAAAAATAAACTTGCACGAC 59.487 36.000 0.00 0.00 0.00 4.34
6883 7086 8.413229 ACAATTGCATATTGTACAAATACTCCC 58.587 33.333 13.23 0.00 40.12 4.30
6884 7087 8.632679 CAATTGCATATTGTACAAATACTCCCT 58.367 33.333 13.23 0.00 32.00 4.20
6885 7088 8.766994 ATTGCATATTGTACAAATACTCCCTT 57.233 30.769 13.23 0.00 32.00 3.95
6886 7089 7.801716 TGCATATTGTACAAATACTCCCTTC 57.198 36.000 13.23 0.00 32.00 3.46
6887 7090 6.481976 TGCATATTGTACAAATACTCCCTTCG 59.518 38.462 13.23 0.00 32.00 3.79
6888 7091 6.482308 GCATATTGTACAAATACTCCCTTCGT 59.518 38.462 13.23 0.00 32.00 3.85
6889 7092 7.307219 GCATATTGTACAAATACTCCCTTCGTC 60.307 40.741 13.23 0.00 32.00 4.20
6890 7093 5.733620 TTGTACAAATACTCCCTTCGTCT 57.266 39.130 5.64 0.00 32.00 4.18
6891 7094 5.320549 TGTACAAATACTCCCTTCGTCTC 57.679 43.478 0.00 0.00 32.00 3.36
6892 7095 4.768448 TGTACAAATACTCCCTTCGTCTCA 59.232 41.667 0.00 0.00 32.00 3.27
6893 7096 4.884668 ACAAATACTCCCTTCGTCTCAA 57.115 40.909 0.00 0.00 0.00 3.02
6894 7097 5.223449 ACAAATACTCCCTTCGTCTCAAA 57.777 39.130 0.00 0.00 0.00 2.69
6895 7098 5.617252 ACAAATACTCCCTTCGTCTCAAAA 58.383 37.500 0.00 0.00 0.00 2.44
6896 7099 6.238648 ACAAATACTCCCTTCGTCTCAAAAT 58.761 36.000 0.00 0.00 0.00 1.82
6897 7100 7.391620 ACAAATACTCCCTTCGTCTCAAAATA 58.608 34.615 0.00 0.00 0.00 1.40
6898 7101 7.881232 ACAAATACTCCCTTCGTCTCAAAATAA 59.119 33.333 0.00 0.00 0.00 1.40
6899 7102 8.391106 CAAATACTCCCTTCGTCTCAAAATAAG 58.609 37.037 0.00 0.00 0.00 1.73
6900 7103 5.485209 ACTCCCTTCGTCTCAAAATAAGT 57.515 39.130 0.00 0.00 0.00 2.24
6901 7104 5.238583 ACTCCCTTCGTCTCAAAATAAGTG 58.761 41.667 0.00 0.00 0.00 3.16
6902 7105 5.221661 ACTCCCTTCGTCTCAAAATAAGTGT 60.222 40.000 0.00 0.00 0.00 3.55
6903 7106 5.235516 TCCCTTCGTCTCAAAATAAGTGTC 58.764 41.667 0.00 0.00 0.00 3.67
6904 7107 5.011738 TCCCTTCGTCTCAAAATAAGTGTCT 59.988 40.000 0.00 0.00 0.00 3.41
6905 7108 5.701290 CCCTTCGTCTCAAAATAAGTGTCTT 59.299 40.000 0.00 0.00 0.00 3.01
6906 7109 6.872020 CCCTTCGTCTCAAAATAAGTGTCTTA 59.128 38.462 0.00 0.00 0.00 2.10
6907 7110 7.386848 CCCTTCGTCTCAAAATAAGTGTCTTAA 59.613 37.037 0.00 0.00 0.00 1.85
6908 7111 8.221766 CCTTCGTCTCAAAATAAGTGTCTTAAC 58.778 37.037 0.00 0.00 0.00 2.01
6909 7112 8.882415 TTCGTCTCAAAATAAGTGTCTTAACT 57.118 30.769 0.00 0.00 0.00 2.24
6910 7113 8.882415 TCGTCTCAAAATAAGTGTCTTAACTT 57.118 30.769 0.00 0.00 42.89 2.66
6911 7114 9.321562 TCGTCTCAAAATAAGTGTCTTAACTTT 57.678 29.630 0.00 0.00 40.77 2.66
6921 7124 9.819267 ATAAGTGTCTTAACTTTATACTGGCTC 57.181 33.333 0.00 0.00 40.77 4.70
6922 7125 7.483580 AGTGTCTTAACTTTATACTGGCTCT 57.516 36.000 0.00 0.00 0.00 4.09
6923 7126 8.591114 AGTGTCTTAACTTTATACTGGCTCTA 57.409 34.615 0.00 0.00 0.00 2.43
6924 7127 8.688151 AGTGTCTTAACTTTATACTGGCTCTAG 58.312 37.037 0.00 0.00 0.00 2.43
6925 7128 8.468399 GTGTCTTAACTTTATACTGGCTCTAGT 58.532 37.037 0.00 0.00 34.71 2.57
6926 7129 9.690913 TGTCTTAACTTTATACTGGCTCTAGTA 57.309 33.333 0.00 0.00 37.54 1.82
6927 7130 9.949174 GTCTTAACTTTATACTGGCTCTAGTAC 57.051 37.037 0.00 0.00 36.09 2.73
6928 7131 9.690913 TCTTAACTTTATACTGGCTCTAGTACA 57.309 33.333 0.00 0.00 36.09 2.90
6935 7138 9.953565 TTTATACTGGCTCTAGTACAAATTTGT 57.046 29.630 25.99 25.99 44.86 2.83
6952 7155 9.338622 ACAAATTTGTACTAAGCTTAAGACACT 57.661 29.630 22.10 7.39 40.16 3.55
6962 7165 9.998106 ACTAAGCTTAAGACACTTATTTTGAGA 57.002 29.630 6.67 0.00 0.00 3.27
6965 7168 9.507329 AAGCTTAAGACACTTATTTTGAGATGA 57.493 29.630 6.67 0.00 0.00 2.92
6966 7169 9.507329 AGCTTAAGACACTTATTTTGAGATGAA 57.493 29.630 6.67 0.00 0.00 2.57
6967 7170 9.766277 GCTTAAGACACTTATTTTGAGATGAAG 57.234 33.333 6.67 0.00 0.00 3.02
6969 7172 7.693969 AAGACACTTATTTTGAGATGAAGGG 57.306 36.000 0.00 0.00 0.00 3.95
6970 7173 7.020827 AGACACTTATTTTGAGATGAAGGGA 57.979 36.000 0.00 0.00 0.00 4.20
6971 7174 7.108847 AGACACTTATTTTGAGATGAAGGGAG 58.891 38.462 0.00 0.00 0.00 4.30
6980 7183 9.981460 ATTTTGAGATGAAGGGAGTACTTATTT 57.019 29.630 0.00 0.00 0.00 1.40
7005 7208 3.510753 AGTGGCATATGCAAATTGTCACA 59.489 39.130 28.07 11.23 45.89 3.58
7016 7232 5.532779 TGCAAATTGTCACACCACTACATAA 59.467 36.000 0.00 0.00 0.00 1.90
7070 7286 3.322211 TTTGAAGATGCATGCCAAAGG 57.678 42.857 16.68 0.00 0.00 3.11
7071 7287 1.927487 TGAAGATGCATGCCAAAGGT 58.073 45.000 16.68 0.00 0.00 3.50
7091 7307 6.566079 AGGTGTGAATCCATCTTTCTGATA 57.434 37.500 0.00 0.00 33.36 2.15
7144 7360 1.828979 TAAAATCCGCTTCACCACCC 58.171 50.000 0.00 0.00 0.00 4.61
7192 7408 6.020360 GCGAGCTTCATTTATTGTTTTCCATC 60.020 38.462 0.00 0.00 0.00 3.51
7202 7418 4.589216 TTGTTTTCCATCCAGCTTCAAG 57.411 40.909 0.00 0.00 0.00 3.02
7233 7449 2.877097 TTCTGGCAATAGCAACCTCA 57.123 45.000 0.00 0.00 44.61 3.86
7234 7450 2.113860 TCTGGCAATAGCAACCTCAC 57.886 50.000 0.00 0.00 44.61 3.51
7235 7451 1.630369 TCTGGCAATAGCAACCTCACT 59.370 47.619 0.00 0.00 44.61 3.41
7236 7452 2.040278 TCTGGCAATAGCAACCTCACTT 59.960 45.455 0.00 0.00 44.61 3.16
7237 7453 3.263170 TCTGGCAATAGCAACCTCACTTA 59.737 43.478 0.00 0.00 44.61 2.24
7238 7454 4.080356 TCTGGCAATAGCAACCTCACTTAT 60.080 41.667 0.00 0.00 44.61 1.73
7239 7455 4.599041 TGGCAATAGCAACCTCACTTATT 58.401 39.130 0.00 0.00 44.61 1.40
7240 7456 5.750524 TGGCAATAGCAACCTCACTTATTA 58.249 37.500 0.00 0.00 44.61 0.98
7241 7457 5.822519 TGGCAATAGCAACCTCACTTATTAG 59.177 40.000 0.00 0.00 44.61 1.73
7242 7458 5.823045 GGCAATAGCAACCTCACTTATTAGT 59.177 40.000 0.00 0.00 44.61 2.24
7243 7459 6.017852 GGCAATAGCAACCTCACTTATTAGTC 60.018 42.308 0.00 0.00 44.61 2.59
7244 7460 6.538742 GCAATAGCAACCTCACTTATTAGTCA 59.461 38.462 0.00 0.00 41.58 3.41
7283 7499 4.062293 CGACCATGTAAGACTCCAAACAA 58.938 43.478 0.00 0.00 0.00 2.83
7319 7535 1.527370 GGCCTTCTCGCCCTACAAT 59.473 57.895 0.00 0.00 43.66 2.71
7334 7550 8.832521 TCGCCCTACAATTTTATACAACATTAG 58.167 33.333 0.00 0.00 0.00 1.73
7335 7551 8.073768 CGCCCTACAATTTTATACAACATTAGG 58.926 37.037 0.00 0.00 0.00 2.69
7336 7552 7.865889 GCCCTACAATTTTATACAACATTAGGC 59.134 37.037 0.00 0.00 0.00 3.93
7337 7553 9.131791 CCCTACAATTTTATACAACATTAGGCT 57.868 33.333 0.00 0.00 0.00 4.58
7338 7554 9.950680 CCTACAATTTTATACAACATTAGGCTG 57.049 33.333 0.00 0.00 0.00 4.85
7339 7555 9.950680 CTACAATTTTATACAACATTAGGCTGG 57.049 33.333 0.00 0.00 0.00 4.85
7340 7556 8.361169 ACAATTTTATACAACATTAGGCTGGT 57.639 30.769 0.00 0.00 0.00 4.00
7341 7557 8.466798 ACAATTTTATACAACATTAGGCTGGTC 58.533 33.333 0.00 0.00 0.00 4.02
7342 7558 8.465999 CAATTTTATACAACATTAGGCTGGTCA 58.534 33.333 0.00 0.00 0.00 4.02
7343 7559 6.995511 TTTATACAACATTAGGCTGGTCAC 57.004 37.500 0.00 0.00 0.00 3.67
7344 7560 2.949177 ACAACATTAGGCTGGTCACA 57.051 45.000 0.00 0.00 0.00 3.58
7345 7561 3.222173 ACAACATTAGGCTGGTCACAA 57.778 42.857 0.00 0.00 0.00 3.33
7346 7562 3.766545 ACAACATTAGGCTGGTCACAAT 58.233 40.909 0.00 0.00 0.00 2.71
7347 7563 3.507233 ACAACATTAGGCTGGTCACAATG 59.493 43.478 0.00 0.04 33.75 2.82
7348 7564 2.726821 ACATTAGGCTGGTCACAATGG 58.273 47.619 9.52 0.00 32.20 3.16
7349 7565 2.026641 CATTAGGCTGGTCACAATGGG 58.973 52.381 0.00 0.00 0.00 4.00
7350 7566 1.367346 TTAGGCTGGTCACAATGGGA 58.633 50.000 0.00 0.00 0.00 4.37
7351 7567 1.367346 TAGGCTGGTCACAATGGGAA 58.633 50.000 0.00 0.00 0.00 3.97
7352 7568 0.038744 AGGCTGGTCACAATGGGAAG 59.961 55.000 0.00 0.00 0.00 3.46
7353 7569 0.967380 GGCTGGTCACAATGGGAAGG 60.967 60.000 0.00 0.00 0.00 3.46
7354 7570 0.038166 GCTGGTCACAATGGGAAGGA 59.962 55.000 0.00 0.00 0.00 3.36
7355 7571 1.547675 GCTGGTCACAATGGGAAGGAA 60.548 52.381 0.00 0.00 0.00 3.36
7356 7572 2.885554 GCTGGTCACAATGGGAAGGAAT 60.886 50.000 0.00 0.00 0.00 3.01
7357 7573 3.434309 CTGGTCACAATGGGAAGGAATT 58.566 45.455 0.00 0.00 0.00 2.17
7358 7574 3.834231 CTGGTCACAATGGGAAGGAATTT 59.166 43.478 0.00 0.00 0.00 1.82
7359 7575 5.004361 TGGTCACAATGGGAAGGAATTTA 57.996 39.130 0.00 0.00 0.00 1.40
7360 7576 5.016173 TGGTCACAATGGGAAGGAATTTAG 58.984 41.667 0.00 0.00 0.00 1.85
7361 7577 5.222233 TGGTCACAATGGGAAGGAATTTAGA 60.222 40.000 0.00 0.00 0.00 2.10
7362 7578 5.714806 GGTCACAATGGGAAGGAATTTAGAA 59.285 40.000 0.00 0.00 0.00 2.10
7363 7579 6.127619 GGTCACAATGGGAAGGAATTTAGAAG 60.128 42.308 0.00 0.00 0.00 2.85
7364 7580 6.434340 GTCACAATGGGAAGGAATTTAGAAGT 59.566 38.462 0.00 0.00 0.00 3.01
7365 7581 7.610305 GTCACAATGGGAAGGAATTTAGAAGTA 59.390 37.037 0.00 0.00 0.00 2.24
7366 7582 8.167392 TCACAATGGGAAGGAATTTAGAAGTAA 58.833 33.333 0.00 0.00 0.00 2.24
7367 7583 8.244113 CACAATGGGAAGGAATTTAGAAGTAAC 58.756 37.037 0.00 0.00 0.00 2.50
7368 7584 7.947890 ACAATGGGAAGGAATTTAGAAGTAACA 59.052 33.333 0.00 0.00 0.00 2.41
7369 7585 8.971073 CAATGGGAAGGAATTTAGAAGTAACAT 58.029 33.333 0.00 0.00 0.00 2.71
7370 7586 8.753497 ATGGGAAGGAATTTAGAAGTAACATC 57.247 34.615 0.00 0.00 0.00 3.06
7371 7587 7.695055 TGGGAAGGAATTTAGAAGTAACATCA 58.305 34.615 0.00 0.00 0.00 3.07
7372 7588 7.610305 TGGGAAGGAATTTAGAAGTAACATCAC 59.390 37.037 0.00 0.00 0.00 3.06
7373 7589 7.610305 GGGAAGGAATTTAGAAGTAACATCACA 59.390 37.037 0.00 0.00 0.00 3.58
7374 7590 8.451748 GGAAGGAATTTAGAAGTAACATCACAC 58.548 37.037 0.00 0.00 0.00 3.82
7375 7591 8.918202 AAGGAATTTAGAAGTAACATCACACA 57.082 30.769 0.00 0.00 0.00 3.72
7376 7592 8.324163 AGGAATTTAGAAGTAACATCACACAC 57.676 34.615 0.00 0.00 0.00 3.82
7377 7593 8.157476 AGGAATTTAGAAGTAACATCACACACT 58.843 33.333 0.00 0.00 0.00 3.55
7378 7594 8.443937 GGAATTTAGAAGTAACATCACACACTC 58.556 37.037 0.00 0.00 0.00 3.51
7379 7595 7.907214 ATTTAGAAGTAACATCACACACTCC 57.093 36.000 0.00 0.00 0.00 3.85
7380 7596 4.955811 AGAAGTAACATCACACACTCCA 57.044 40.909 0.00 0.00 0.00 3.86
7381 7597 5.290493 AGAAGTAACATCACACACTCCAA 57.710 39.130 0.00 0.00 0.00 3.53
7382 7598 5.869579 AGAAGTAACATCACACACTCCAAT 58.130 37.500 0.00 0.00 0.00 3.16
7383 7599 7.004555 AGAAGTAACATCACACACTCCAATA 57.995 36.000 0.00 0.00 0.00 1.90
7384 7600 6.874134 AGAAGTAACATCACACACTCCAATAC 59.126 38.462 0.00 0.00 0.00 1.89
7385 7601 6.109156 AGTAACATCACACACTCCAATACA 57.891 37.500 0.00 0.00 0.00 2.29
7386 7602 6.530120 AGTAACATCACACACTCCAATACAA 58.470 36.000 0.00 0.00 0.00 2.41
7387 7603 5.689383 AACATCACACACTCCAATACAAC 57.311 39.130 0.00 0.00 0.00 3.32
7388 7604 4.973168 ACATCACACACTCCAATACAACT 58.027 39.130 0.00 0.00 0.00 3.16
7389 7605 5.376625 ACATCACACACTCCAATACAACTT 58.623 37.500 0.00 0.00 0.00 2.66
7390 7606 5.827797 ACATCACACACTCCAATACAACTTT 59.172 36.000 0.00 0.00 0.00 2.66
7391 7607 5.749596 TCACACACTCCAATACAACTTTG 57.250 39.130 0.00 0.00 0.00 2.77
7392 7608 4.036262 TCACACACTCCAATACAACTTTGC 59.964 41.667 0.00 0.00 0.00 3.68
7393 7609 4.036734 CACACACTCCAATACAACTTTGCT 59.963 41.667 0.00 0.00 0.00 3.91
7394 7610 4.644685 ACACACTCCAATACAACTTTGCTT 59.355 37.500 0.00 0.00 0.00 3.91
7395 7611 5.825679 ACACACTCCAATACAACTTTGCTTA 59.174 36.000 0.00 0.00 0.00 3.09
7396 7612 6.490040 ACACACTCCAATACAACTTTGCTTAT 59.510 34.615 0.00 0.00 0.00 1.73
7397 7613 6.803320 CACACTCCAATACAACTTTGCTTATG 59.197 38.462 0.00 0.00 0.00 1.90
7398 7614 6.490040 ACACTCCAATACAACTTTGCTTATGT 59.510 34.615 0.00 0.00 0.00 2.29
7399 7615 6.803320 CACTCCAATACAACTTTGCTTATGTG 59.197 38.462 0.00 0.00 0.00 3.21
7400 7616 6.071952 ACTCCAATACAACTTTGCTTATGTGG 60.072 38.462 0.00 0.00 0.00 4.17
7401 7617 4.864247 CCAATACAACTTTGCTTATGTGGC 59.136 41.667 0.00 0.00 0.00 5.01
7402 7618 5.468592 CAATACAACTTTGCTTATGTGGCA 58.531 37.500 0.00 0.00 37.97 4.92
7403 7619 3.369546 ACAACTTTGCTTATGTGGCAC 57.630 42.857 11.55 11.55 39.55 5.01
7404 7620 2.692557 ACAACTTTGCTTATGTGGCACA 59.307 40.909 24.36 24.36 39.55 4.57
7405 7621 3.321682 ACAACTTTGCTTATGTGGCACAT 59.678 39.130 33.18 33.18 44.52 3.21
7406 7622 4.522405 ACAACTTTGCTTATGTGGCACATA 59.478 37.500 31.06 31.06 44.52 2.29
7407 7623 5.185635 ACAACTTTGCTTATGTGGCACATAT 59.814 36.000 33.89 18.57 44.52 1.78
7408 7624 5.920193 ACTTTGCTTATGTGGCACATATT 57.080 34.783 33.89 17.87 44.52 1.28
7409 7625 6.284891 ACTTTGCTTATGTGGCACATATTT 57.715 33.333 33.89 17.52 44.52 1.40
7410 7626 7.403312 ACTTTGCTTATGTGGCACATATTTA 57.597 32.000 33.89 21.55 44.52 1.40
7411 7627 7.835822 ACTTTGCTTATGTGGCACATATTTAA 58.164 30.769 33.89 25.24 44.52 1.52
7412 7628 8.477256 ACTTTGCTTATGTGGCACATATTTAAT 58.523 29.630 33.89 15.77 44.52 1.40
7413 7629 8.645730 TTTGCTTATGTGGCACATATTTAATG 57.354 30.769 33.89 20.34 44.52 1.90
7414 7630 7.579761 TGCTTATGTGGCACATATTTAATGA 57.420 32.000 33.89 19.68 44.52 2.57
7415 7631 8.005192 TGCTTATGTGGCACATATTTAATGAA 57.995 30.769 33.89 20.49 44.52 2.57
7416 7632 8.136800 TGCTTATGTGGCACATATTTAATGAAG 58.863 33.333 33.89 27.40 44.52 3.02
7417 7633 8.352201 GCTTATGTGGCACATATTTAATGAAGA 58.648 33.333 33.89 17.83 44.52 2.87
7418 7634 9.888878 CTTATGTGGCACATATTTAATGAAGAG 57.111 33.333 33.89 22.09 44.52 2.85
7419 7635 9.625747 TTATGTGGCACATATTTAATGAAGAGA 57.374 29.630 33.89 16.11 44.52 3.10
7420 7636 7.558161 TGTGGCACATATTTAATGAAGAGAG 57.442 36.000 17.96 0.00 44.52 3.20
7421 7637 7.337938 TGTGGCACATATTTAATGAAGAGAGA 58.662 34.615 17.96 0.00 44.52 3.10
7422 7638 7.496920 TGTGGCACATATTTAATGAAGAGAGAG 59.503 37.037 17.96 0.00 44.52 3.20
7423 7639 6.994496 TGGCACATATTTAATGAAGAGAGAGG 59.006 38.462 0.00 0.00 0.00 3.69
7424 7640 6.995091 GGCACATATTTAATGAAGAGAGAGGT 59.005 38.462 0.00 0.00 0.00 3.85
7425 7641 7.041508 GGCACATATTTAATGAAGAGAGAGGTG 60.042 40.741 0.00 0.00 0.00 4.00
7426 7642 7.519649 GCACATATTTAATGAAGAGAGAGGTGC 60.520 40.741 0.00 0.00 37.76 5.01
7427 7643 7.714377 CACATATTTAATGAAGAGAGAGGTGCT 59.286 37.037 0.00 0.00 0.00 4.40
7428 7644 8.270744 ACATATTTAATGAAGAGAGAGGTGCTT 58.729 33.333 0.00 0.00 0.00 3.91
7429 7645 6.998968 ATTTAATGAAGAGAGAGGTGCTTG 57.001 37.500 0.00 0.00 0.00 4.01
7430 7646 5.489792 TTAATGAAGAGAGAGGTGCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
7431 7647 2.827800 TGAAGAGAGAGGTGCTTGTG 57.172 50.000 0.00 0.00 0.00 3.33
7432 7648 1.345741 TGAAGAGAGAGGTGCTTGTGG 59.654 52.381 0.00 0.00 0.00 4.17
7433 7649 1.346068 GAAGAGAGAGGTGCTTGTGGT 59.654 52.381 0.00 0.00 0.00 4.16
7434 7650 2.310779 AGAGAGAGGTGCTTGTGGTA 57.689 50.000 0.00 0.00 0.00 3.25
7435 7651 2.609747 AGAGAGAGGTGCTTGTGGTAA 58.390 47.619 0.00 0.00 0.00 2.85
7436 7652 2.300437 AGAGAGAGGTGCTTGTGGTAAC 59.700 50.000 0.00 0.00 0.00 2.50
7437 7653 2.300437 GAGAGAGGTGCTTGTGGTAACT 59.700 50.000 0.00 0.00 37.61 2.24
7438 7654 3.507411 AGAGAGGTGCTTGTGGTAACTA 58.493 45.455 0.00 0.00 37.61 2.24
7439 7655 3.511934 AGAGAGGTGCTTGTGGTAACTAG 59.488 47.826 0.00 0.00 37.61 2.57
7456 7672 5.672421 AACTAGCTAAGTTACCGGAACAT 57.328 39.130 9.46 4.03 46.85 2.71
7457 7673 5.259832 ACTAGCTAAGTTACCGGAACATC 57.740 43.478 9.46 0.00 40.86 3.06
7458 7674 4.708421 ACTAGCTAAGTTACCGGAACATCA 59.292 41.667 9.46 0.00 40.86 3.07
7459 7675 3.858247 AGCTAAGTTACCGGAACATCAC 58.142 45.455 9.46 0.66 40.86 3.06
7460 7676 3.259876 AGCTAAGTTACCGGAACATCACA 59.740 43.478 9.46 0.00 40.86 3.58
7461 7677 3.370061 GCTAAGTTACCGGAACATCACAC 59.630 47.826 9.46 0.00 40.86 3.82
7462 7678 3.478857 AAGTTACCGGAACATCACACA 57.521 42.857 9.46 0.00 40.86 3.72
7463 7679 2.762745 AGTTACCGGAACATCACACAC 58.237 47.619 9.46 0.00 40.86 3.82
7464 7680 2.367567 AGTTACCGGAACATCACACACT 59.632 45.455 9.46 0.00 40.86 3.55
7465 7681 2.735134 GTTACCGGAACATCACACACTC 59.265 50.000 9.46 0.00 38.02 3.51
7466 7682 0.034896 ACCGGAACATCACACACTCC 59.965 55.000 9.46 0.00 0.00 3.85
7467 7683 0.034756 CCGGAACATCACACACTCCA 59.965 55.000 0.00 0.00 0.00 3.86
7468 7684 1.542328 CCGGAACATCACACACTCCAA 60.542 52.381 0.00 0.00 0.00 3.53
7469 7685 1.800586 CGGAACATCACACACTCCAAG 59.199 52.381 0.00 0.00 0.00 3.61
7470 7686 2.547855 CGGAACATCACACACTCCAAGA 60.548 50.000 0.00 0.00 0.00 3.02
7471 7687 3.476552 GGAACATCACACACTCCAAGAA 58.523 45.455 0.00 0.00 0.00 2.52
7472 7688 3.882888 GGAACATCACACACTCCAAGAAA 59.117 43.478 0.00 0.00 0.00 2.52
7473 7689 4.261197 GGAACATCACACACTCCAAGAAAC 60.261 45.833 0.00 0.00 0.00 2.78
7474 7690 3.884895 ACATCACACACTCCAAGAAACA 58.115 40.909 0.00 0.00 0.00 2.83
7475 7691 4.269183 ACATCACACACTCCAAGAAACAA 58.731 39.130 0.00 0.00 0.00 2.83
7476 7692 4.889409 ACATCACACACTCCAAGAAACAAT 59.111 37.500 0.00 0.00 0.00 2.71
7477 7693 4.898829 TCACACACTCCAAGAAACAATG 57.101 40.909 0.00 0.00 0.00 2.82
7478 7694 4.522114 TCACACACTCCAAGAAACAATGA 58.478 39.130 0.00 0.00 0.00 2.57
7479 7695 4.576053 TCACACACTCCAAGAAACAATGAG 59.424 41.667 0.00 0.00 0.00 2.90
7480 7696 4.336433 CACACACTCCAAGAAACAATGAGT 59.664 41.667 0.00 0.00 36.77 3.41
7481 7697 4.576463 ACACACTCCAAGAAACAATGAGTC 59.424 41.667 0.00 0.00 34.21 3.36
7482 7698 4.818546 CACACTCCAAGAAACAATGAGTCT 59.181 41.667 0.00 0.00 34.21 3.24
7483 7699 5.991606 CACACTCCAAGAAACAATGAGTCTA 59.008 40.000 0.00 0.00 34.21 2.59
7484 7700 6.652481 CACACTCCAAGAAACAATGAGTCTAT 59.348 38.462 0.00 0.00 34.21 1.98
7485 7701 7.819415 CACACTCCAAGAAACAATGAGTCTATA 59.181 37.037 0.00 0.00 34.21 1.31
7486 7702 8.375506 ACACTCCAAGAAACAATGAGTCTATAA 58.624 33.333 0.00 0.00 34.21 0.98
7487 7703 8.660373 CACTCCAAGAAACAATGAGTCTATAAC 58.340 37.037 0.00 0.00 34.21 1.89
7488 7704 7.824779 ACTCCAAGAAACAATGAGTCTATAACC 59.175 37.037 0.00 0.00 30.81 2.85
7489 7705 7.918076 TCCAAGAAACAATGAGTCTATAACCT 58.082 34.615 0.00 0.00 0.00 3.50
7490 7706 9.042450 TCCAAGAAACAATGAGTCTATAACCTA 57.958 33.333 0.00 0.00 0.00 3.08
7491 7707 9.667107 CCAAGAAACAATGAGTCTATAACCTAA 57.333 33.333 0.00 0.00 0.00 2.69
7510 7726 8.445275 AACCTAATAAATACATCGTTGCATGA 57.555 30.769 0.00 0.00 0.00 3.07
7511 7727 7.861630 ACCTAATAAATACATCGTTGCATGAC 58.138 34.615 0.00 0.00 0.00 3.06
7512 7728 7.497579 ACCTAATAAATACATCGTTGCATGACA 59.502 33.333 0.00 0.00 0.00 3.58
7513 7729 7.798516 CCTAATAAATACATCGTTGCATGACAC 59.201 37.037 0.00 0.00 0.00 3.67
7514 7730 6.925610 ATAAATACATCGTTGCATGACACT 57.074 33.333 0.00 0.00 0.00 3.55
7515 7731 8.432110 AATAAATACATCGTTGCATGACACTA 57.568 30.769 0.00 0.00 0.00 2.74
7516 7732 5.718649 AATACATCGTTGCATGACACTAC 57.281 39.130 0.00 0.00 0.00 2.73
7517 7733 3.038788 ACATCGTTGCATGACACTACA 57.961 42.857 0.00 0.00 0.00 2.74
7518 7734 3.599343 ACATCGTTGCATGACACTACAT 58.401 40.909 0.00 0.00 0.00 2.29
7519 7735 4.754322 ACATCGTTGCATGACACTACATA 58.246 39.130 0.00 0.00 0.00 2.29
7520 7736 4.805719 ACATCGTTGCATGACACTACATAG 59.194 41.667 0.00 0.00 0.00 2.23
7521 7737 4.712122 TCGTTGCATGACACTACATAGA 57.288 40.909 0.00 0.00 0.00 1.98
7522 7738 5.262588 TCGTTGCATGACACTACATAGAT 57.737 39.130 0.00 0.00 0.00 1.98
7523 7739 5.043248 TCGTTGCATGACACTACATAGATG 58.957 41.667 0.00 0.00 0.00 2.90
7524 7740 4.805719 CGTTGCATGACACTACATAGATGT 59.194 41.667 0.00 0.08 44.48 3.06
7525 7741 5.291858 CGTTGCATGACACTACATAGATGTT 59.708 40.000 0.00 0.00 41.97 2.71
7526 7742 6.508563 CGTTGCATGACACTACATAGATGTTC 60.509 42.308 0.00 0.00 41.97 3.18
7527 7743 5.359756 TGCATGACACTACATAGATGTTCC 58.640 41.667 0.00 0.00 41.97 3.62
7528 7744 5.129320 TGCATGACACTACATAGATGTTCCT 59.871 40.000 0.00 0.00 41.97 3.36
7529 7745 6.323739 TGCATGACACTACATAGATGTTCCTA 59.676 38.462 0.00 0.00 41.97 2.94
7530 7746 6.642950 GCATGACACTACATAGATGTTCCTAC 59.357 42.308 0.00 0.00 41.97 3.18
7531 7747 6.710597 TGACACTACATAGATGTTCCTACC 57.289 41.667 0.00 0.00 41.97 3.18
7532 7748 5.597182 TGACACTACATAGATGTTCCTACCC 59.403 44.000 0.00 0.00 41.97 3.69
7533 7749 5.525484 ACACTACATAGATGTTCCTACCCA 58.475 41.667 0.00 0.00 41.97 4.51
7534 7750 5.363005 ACACTACATAGATGTTCCTACCCAC 59.637 44.000 0.00 0.00 41.97 4.61
7535 7751 5.598830 CACTACATAGATGTTCCTACCCACT 59.401 44.000 0.00 0.00 41.97 4.00
7536 7752 6.776116 CACTACATAGATGTTCCTACCCACTA 59.224 42.308 0.00 0.00 41.97 2.74
7537 7753 7.451877 CACTACATAGATGTTCCTACCCACTAT 59.548 40.741 0.00 0.00 41.97 2.12
7538 7754 6.672266 ACATAGATGTTCCTACCCACTATG 57.328 41.667 0.00 0.00 37.90 2.23
7539 7755 6.382087 ACATAGATGTTCCTACCCACTATGA 58.618 40.000 1.97 0.00 37.90 2.15
7540 7756 6.844388 ACATAGATGTTCCTACCCACTATGAA 59.156 38.462 1.97 0.00 37.90 2.57
7541 7757 5.878406 AGATGTTCCTACCCACTATGAAG 57.122 43.478 0.00 0.00 0.00 3.02
7542 7758 4.656112 AGATGTTCCTACCCACTATGAAGG 59.344 45.833 0.00 0.00 0.00 3.46
7543 7759 3.798515 TGTTCCTACCCACTATGAAGGT 58.201 45.455 0.00 0.00 37.69 3.50
7544 7760 4.950361 TGTTCCTACCCACTATGAAGGTA 58.050 43.478 0.00 0.00 35.02 3.08
7551 7767 7.598759 CTACCCACTATGAAGGTAGTAACAT 57.401 40.000 7.19 0.00 45.39 2.71
7552 7768 8.701908 CTACCCACTATGAAGGTAGTAACATA 57.298 38.462 7.19 0.00 45.39 2.29
7553 7769 7.598759 ACCCACTATGAAGGTAGTAACATAG 57.401 40.000 0.00 0.00 44.14 2.23
7555 7771 7.287235 ACCCACTATGAAGGTAGTAACATAGTC 59.713 40.741 13.37 0.00 46.61 2.59
7556 7772 7.506261 CCCACTATGAAGGTAGTAACATAGTCT 59.494 40.741 13.37 0.00 46.61 3.24
7557 7773 9.570468 CCACTATGAAGGTAGTAACATAGTCTA 57.430 37.037 13.37 0.00 46.61 2.59
7562 7778 9.696572 ATGAAGGTAGTAACATAGTCTAGTGAA 57.303 33.333 0.00 0.00 0.00 3.18
7563 7779 9.175312 TGAAGGTAGTAACATAGTCTAGTGAAG 57.825 37.037 0.00 0.00 0.00 3.02
7564 7780 9.176460 GAAGGTAGTAACATAGTCTAGTGAAGT 57.824 37.037 0.00 0.00 0.00 3.01
7565 7781 8.508883 AGGTAGTAACATAGTCTAGTGAAGTG 57.491 38.462 0.00 0.00 0.00 3.16
7566 7782 8.108364 AGGTAGTAACATAGTCTAGTGAAGTGT 58.892 37.037 0.00 0.00 0.00 3.55
7567 7783 8.182881 GGTAGTAACATAGTCTAGTGAAGTGTG 58.817 40.741 0.00 0.00 0.00 3.82
7568 7784 7.762588 AGTAACATAGTCTAGTGAAGTGTGT 57.237 36.000 0.00 0.00 0.00 3.72
7569 7785 8.859236 AGTAACATAGTCTAGTGAAGTGTGTA 57.141 34.615 0.00 0.00 0.00 2.90
7570 7786 9.293404 AGTAACATAGTCTAGTGAAGTGTGTAA 57.707 33.333 0.00 0.00 0.00 2.41
7571 7787 9.557338 GTAACATAGTCTAGTGAAGTGTGTAAG 57.443 37.037 0.00 0.00 0.00 2.34
7572 7788 7.762588 ACATAGTCTAGTGAAGTGTGTAAGT 57.237 36.000 0.00 0.00 0.00 2.24
7573 7789 8.179509 ACATAGTCTAGTGAAGTGTGTAAGTT 57.820 34.615 0.00 0.00 0.00 2.66
7574 7790 9.293404 ACATAGTCTAGTGAAGTGTGTAAGTTA 57.707 33.333 0.00 0.00 0.00 2.24
7575 7791 9.557338 CATAGTCTAGTGAAGTGTGTAAGTTAC 57.443 37.037 6.06 6.06 0.00 2.50
7576 7792 7.820578 AGTCTAGTGAAGTGTGTAAGTTACT 57.179 36.000 14.00 0.00 0.00 2.24
7577 7793 8.915057 AGTCTAGTGAAGTGTGTAAGTTACTA 57.085 34.615 14.00 1.06 0.00 1.82
7578 7794 9.001542 AGTCTAGTGAAGTGTGTAAGTTACTAG 57.998 37.037 14.00 6.07 38.31 2.57
7579 7795 7.750014 GTCTAGTGAAGTGTGTAAGTTACTAGC 59.250 40.741 14.00 5.48 37.40 3.42
7580 7796 6.651975 AGTGAAGTGTGTAAGTTACTAGCT 57.348 37.500 14.00 6.35 0.00 3.32
7581 7797 7.052142 AGTGAAGTGTGTAAGTTACTAGCTT 57.948 36.000 14.00 13.25 0.00 3.74
7582 7798 8.174733 AGTGAAGTGTGTAAGTTACTAGCTTA 57.825 34.615 14.00 0.00 0.00 3.09
7583 7799 8.804204 AGTGAAGTGTGTAAGTTACTAGCTTAT 58.196 33.333 14.00 3.60 32.01 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 5.875359 CCCTAGTAATCACAAGGAAGTGTTC 59.125 44.000 0.00 0.00 40.37 3.18
54 55 5.461737 TCACGAAAATCCATGCAACTTTTTC 59.538 36.000 13.30 13.30 34.51 2.29
85 91 4.500603 TTGCCGGAAAATAGCGTAAAAA 57.499 36.364 5.05 0.00 0.00 1.94
90 96 3.250040 GTGATATTGCCGGAAAATAGCGT 59.750 43.478 5.05 0.00 30.30 5.07
102 108 4.808895 TCAAGTATGTGTCGTGATATTGCC 59.191 41.667 0.00 0.00 0.00 4.52
226 232 4.743057 TCCATACTCAGTGATTCTGTGG 57.257 45.455 0.00 0.00 43.97 4.17
228 234 5.121811 GCAATCCATACTCAGTGATTCTGT 58.878 41.667 0.00 0.00 43.97 3.41
229 235 5.121105 TGCAATCCATACTCAGTGATTCTG 58.879 41.667 0.00 0.00 44.85 3.02
230 236 5.363562 TGCAATCCATACTCAGTGATTCT 57.636 39.130 0.00 0.00 0.00 2.40
237 243 4.999950 GGTTATCCTGCAATCCATACTCAG 59.000 45.833 0.00 0.00 0.00 3.35
259 265 1.751927 GCAGGCATGGAGAGTTGGG 60.752 63.158 0.00 0.00 0.00 4.12
497 507 4.493547 CACTTCAGAGGTTCAGATCAGAC 58.506 47.826 0.00 0.00 0.00 3.51
545 555 1.519013 CTCCGCTTCAGAGCTCAGC 60.519 63.158 17.77 15.16 46.96 4.26
635 645 3.585862 ACATCTAATTGTTCGTCTGCGT 58.414 40.909 0.00 0.00 39.49 5.24
636 646 5.034797 TCTACATCTAATTGTTCGTCTGCG 58.965 41.667 0.00 0.00 39.92 5.18
717 730 4.011517 GCCTCCACGGAACCGGAA 62.012 66.667 9.46 1.81 44.69 4.30
834 850 1.197721 CTGACAACTCAAACCATCCGC 59.802 52.381 0.00 0.00 0.00 5.54
849 871 4.373116 GCTTCCGACGCCCTGACA 62.373 66.667 0.00 0.00 0.00 3.58
965 989 1.376812 GGAGTGGTGGCCTAAACCG 60.377 63.158 3.32 0.00 40.86 4.44
1132 1160 1.893786 GAGCAGCTTCGGAGAGGAA 59.106 57.895 0.00 0.00 38.43 3.36
1189 1220 2.168313 TGAGAGATTTCATAGCCGCACA 59.832 45.455 0.00 0.00 0.00 4.57
1382 1415 4.087892 CAGGAGACCAGCCACCGG 62.088 72.222 0.00 0.00 0.00 5.28
1384 1417 1.484444 AAGACAGGAGACCAGCCACC 61.484 60.000 0.00 0.00 0.00 4.61
1392 1425 3.433615 CCAAATTCGTGAAGACAGGAGAC 59.566 47.826 0.00 0.00 40.99 3.36
1393 1426 3.557054 CCCAAATTCGTGAAGACAGGAGA 60.557 47.826 0.00 0.00 40.99 3.71
1591 1654 3.670055 CAGGTGAAAACAATCGATTGCAC 59.330 43.478 32.70 28.73 41.38 4.57
1825 1888 2.024414 AGGAAACAAGGTCTTGCACAC 58.976 47.619 10.31 0.00 44.03 3.82
1826 1889 2.426738 CAAGGAAACAAGGTCTTGCACA 59.573 45.455 10.31 0.00 44.03 4.57
1828 1891 3.011566 TCAAGGAAACAAGGTCTTGCA 57.988 42.857 10.31 0.00 44.03 4.08
1962 2025 1.355971 CATCAGCCAACTGCAATTGC 58.644 50.000 23.69 23.69 44.10 3.56
2077 2140 5.101529 TCCCTCCTATCAAAATCCCTATCC 58.898 45.833 0.00 0.00 0.00 2.59
2079 2142 5.994629 TCTCCCTCCTATCAAAATCCCTAT 58.005 41.667 0.00 0.00 0.00 2.57
2080 2143 5.137949 TCTCTCCCTCCTATCAAAATCCCTA 59.862 44.000 0.00 0.00 0.00 3.53
2081 2144 4.077745 TCTCTCCCTCCTATCAAAATCCCT 60.078 45.833 0.00 0.00 0.00 4.20
2082 2145 4.235372 TCTCTCCCTCCTATCAAAATCCC 58.765 47.826 0.00 0.00 0.00 3.85
2083 2146 5.151454 TCTCTCTCCCTCCTATCAAAATCC 58.849 45.833 0.00 0.00 0.00 3.01
2085 2148 5.102870 TCCTCTCTCTCCCTCCTATCAAAAT 60.103 44.000 0.00 0.00 0.00 1.82
2086 2149 4.233053 TCCTCTCTCTCCCTCCTATCAAAA 59.767 45.833 0.00 0.00 0.00 2.44
2087 2150 3.794399 TCCTCTCTCTCCCTCCTATCAAA 59.206 47.826 0.00 0.00 0.00 2.69
2089 2152 2.714250 GTCCTCTCTCTCCCTCCTATCA 59.286 54.545 0.00 0.00 0.00 2.15
2091 2154 2.716424 CTGTCCTCTCTCTCCCTCCTAT 59.284 54.545 0.00 0.00 0.00 2.57
2092 2155 2.131854 CTGTCCTCTCTCTCCCTCCTA 58.868 57.143 0.00 0.00 0.00 2.94
2093 2156 0.926293 CTGTCCTCTCTCTCCCTCCT 59.074 60.000 0.00 0.00 0.00 3.69
2094 2157 0.106217 CCTGTCCTCTCTCTCCCTCC 60.106 65.000 0.00 0.00 0.00 4.30
2095 2158 0.923358 TCCTGTCCTCTCTCTCCCTC 59.077 60.000 0.00 0.00 0.00 4.30
2097 2160 2.107366 CTTTCCTGTCCTCTCTCTCCC 58.893 57.143 0.00 0.00 0.00 4.30
2107 2191 0.771755 AGTCCCAACCTTTCCTGTCC 59.228 55.000 0.00 0.00 0.00 4.02
2154 2238 2.171237 CCACCATCTCTTGTATCAGCCA 59.829 50.000 0.00 0.00 0.00 4.75
2245 2329 7.800300 AGAGTCTACACCTTTTCTAATTCCT 57.200 36.000 0.00 0.00 0.00 3.36
2600 2684 0.460284 CGCAATTGACGGCTCCTACT 60.460 55.000 10.34 0.00 0.00 2.57
2601 2685 0.459585 TCGCAATTGACGGCTCCTAC 60.460 55.000 10.34 0.00 0.00 3.18
2602 2686 0.179111 CTCGCAATTGACGGCTCCTA 60.179 55.000 10.34 0.00 0.00 2.94
2677 2761 0.796312 CCCGACCATGAAAACTCGTG 59.204 55.000 0.00 0.00 0.00 4.35
2824 2908 2.975489 TCTTCTTCCAGAAACAGAGCCT 59.025 45.455 0.00 0.00 33.19 4.58
3115 3199 1.273324 ACACCAGGTAGAAGAGGAGGG 60.273 57.143 0.00 0.00 0.00 4.30
3383 3467 2.292569 CACCAGATGGCTTATCATGTGC 59.707 50.000 0.00 0.00 37.17 4.57
3524 3608 3.512329 TCCGCTACACTTGTAAGATCCAA 59.488 43.478 0.00 0.00 0.00 3.53
3760 3844 7.341030 TCTTCAAATTCATAATCTCCTCAGCA 58.659 34.615 0.00 0.00 0.00 4.41
3861 3945 6.979817 TGTTGATTCAAACAATTCACAGAAGG 59.020 34.615 0.00 0.00 37.12 3.46
3866 3950 5.049167 GCCTGTTGATTCAAACAATTCACA 58.951 37.500 0.00 0.00 39.47 3.58
3950 4034 2.270352 TCTTCAAACATTGACGGCCT 57.730 45.000 0.00 0.00 39.87 5.19
3974 4058 7.449247 AGATTACTGAAAGAGAAAGCTGTCTT 58.551 34.615 8.12 4.14 36.76 3.01
3998 4082 5.845953 CAGAACGTAAAACTGCATGTGTTAG 59.154 40.000 6.65 0.00 29.62 2.34
4016 4100 7.148918 CCAGAAATTTGACAATAAAGCAGAACG 60.149 37.037 0.00 0.00 0.00 3.95
4027 4111 4.581868 CCATTGCCCAGAAATTTGACAAT 58.418 39.130 0.00 0.00 0.00 2.71
4072 4157 2.762887 GAGGACACATGAGACTGGATGA 59.237 50.000 0.00 0.00 0.00 2.92
4080 4165 1.741028 TTTGGGGAGGACACATGAGA 58.259 50.000 0.00 0.00 0.00 3.27
4108 4193 5.155278 ACATGATCAAAATGCATTGTGGT 57.845 34.783 25.88 21.26 0.00 4.16
4130 4215 2.890311 ACGGAATGGCAATGACAGAAAA 59.110 40.909 0.00 0.00 0.00 2.29
4169 4255 5.847304 AGAGTGCGAGATTTATGCAGATTA 58.153 37.500 0.00 0.00 39.67 1.75
4189 4275 6.536582 ACAGATGAATACCACATTCGAAAGAG 59.463 38.462 7.49 0.00 43.69 2.85
4397 4483 4.694982 TGCAACAATGTACGAGAATCATGT 59.305 37.500 0.00 0.00 33.17 3.21
4515 4602 6.489700 TGCACAAAGAAAGATGGATACTTCAA 59.510 34.615 0.00 0.00 42.97 2.69
4701 4788 8.918116 AGCACAGTTTAGAAGACAGATATCATA 58.082 33.333 5.32 0.00 0.00 2.15
4725 4812 1.270826 GAAAGGAAAAGTGGCCTCAGC 59.729 52.381 3.32 0.00 32.07 4.26
4734 4821 6.717084 CAGGAACAAGATAGGAAAGGAAAAGT 59.283 38.462 0.00 0.00 0.00 2.66
4877 4967 0.322816 TCCTTCCACAAGCCAGATGC 60.323 55.000 0.00 0.00 41.71 3.91
4878 4968 2.426024 CAATCCTTCCACAAGCCAGATG 59.574 50.000 0.00 0.00 0.00 2.90
4971 5061 6.320494 TGTAATACGTTTTGGCAGTTCAAT 57.680 33.333 0.00 0.00 0.00 2.57
4989 5079 9.251440 TGTACTACCTCTGTTCACTAATGTAAT 57.749 33.333 0.00 0.00 0.00 1.89
5026 5116 3.255642 GGCAGGTCAACAAGAAAATAGCA 59.744 43.478 0.00 0.00 0.00 3.49
5086 5176 9.818796 TTGTTTTGTTTGAGTTTCAAAATTAGC 57.181 25.926 5.86 0.00 46.53 3.09
5093 5183 7.254252 CGCCATATTGTTTTGTTTGAGTTTCAA 60.254 33.333 0.00 0.00 34.03 2.69
5094 5184 6.199908 CGCCATATTGTTTTGTTTGAGTTTCA 59.800 34.615 0.00 0.00 0.00 2.69
5150 5240 2.121786 GAAAATGCATGCATAGTGGCG 58.878 47.619 32.36 0.00 35.31 5.69
5188 5278 4.458989 TCTTGGACATACTTTGATGGTTGC 59.541 41.667 0.00 0.00 0.00 4.17
5245 5335 7.592938 CACACTCATGCATTTTAGGAAAACTA 58.407 34.615 0.00 0.00 32.37 2.24
5248 5338 5.229423 GCACACTCATGCATTTTAGGAAAA 58.771 37.500 0.00 0.00 45.39 2.29
5263 5353 4.887071 ACTCCTTTTAAATGTGCACACTCA 59.113 37.500 24.37 6.86 0.00 3.41
5286 5376 6.710295 AGTACAACACATGCAATCTCTAACAA 59.290 34.615 0.00 0.00 0.00 2.83
5298 5388 3.438087 AGAATCAGCAGTACAACACATGC 59.562 43.478 0.00 0.00 38.97 4.06
5313 5403 6.239120 CCCATTACCTTTATGCCAAGAATCAG 60.239 42.308 0.00 0.00 0.00 2.90
5339 5429 4.266976 GCGCATTACGTACTCTAACAACAT 59.733 41.667 0.30 0.00 46.11 2.71
5340 5430 3.609373 GCGCATTACGTACTCTAACAACA 59.391 43.478 0.30 0.00 46.11 3.33
5341 5431 3.000376 GGCGCATTACGTACTCTAACAAC 60.000 47.826 10.83 0.00 46.11 3.32
5342 5432 3.119388 AGGCGCATTACGTACTCTAACAA 60.119 43.478 10.83 0.00 46.11 2.83
5569 5659 2.093711 TCTGTTATGGCGCTGCTAGAAA 60.094 45.455 7.64 0.00 0.00 2.52
5647 5737 1.086696 TCTGCAAAAGGCTATCACGC 58.913 50.000 0.00 0.00 45.15 5.34
5665 5755 6.039717 TGAAAATGACCAAGGCATAGCTATTC 59.960 38.462 2.64 0.00 0.00 1.75
5666 5756 5.893255 TGAAAATGACCAAGGCATAGCTATT 59.107 36.000 2.64 0.00 0.00 1.73
5667 5757 5.448654 TGAAAATGACCAAGGCATAGCTAT 58.551 37.500 0.00 0.00 0.00 2.97
5675 5765 4.388485 ACCAAAATGAAAATGACCAAGGC 58.612 39.130 0.00 0.00 0.00 4.35
5713 5806 7.415206 CCCTAGTAACTTCACCAAAATATGTGC 60.415 40.741 0.00 0.00 32.51 4.57
5806 5932 7.495934 ACATAAGGAATTCTGAAATACACTCCG 59.504 37.037 5.23 0.00 0.00 4.63
5885 6011 9.454585 CATCACAAACGAATATTATGCTTCAAT 57.545 29.630 0.00 0.00 0.00 2.57
6129 6255 3.941483 AGGCATATGCTCTTGTGTAACAC 59.059 43.478 26.12 5.71 44.51 3.32
6130 6256 4.220693 AGGCATATGCTCTTGTGTAACA 57.779 40.909 26.12 0.00 43.58 2.41
6150 6278 1.354337 CGTGTGGAGATCGTGGCAAG 61.354 60.000 0.00 0.00 0.00 4.01
6169 6297 6.593382 AGTTTCTTAGCAGAGATGACATTGAC 59.407 38.462 0.00 0.00 0.00 3.18
6308 6436 1.152567 CCTGAGCCCCTCGATCTCT 60.153 63.158 0.00 0.00 32.35 3.10
6377 6505 2.801631 CGAGCTCCATGGAGGGGTC 61.802 68.421 36.92 27.27 41.40 4.46
6402 6532 1.405105 GCAGCTTGAAAACAGGTCACA 59.595 47.619 0.00 0.00 0.00 3.58
6407 6537 2.159198 ACAGTTGCAGCTTGAAAACAGG 60.159 45.455 0.00 0.00 0.00 4.00
6424 6554 4.892934 TGGAAAAAGAAATGTAGCCACAGT 59.107 37.500 0.00 0.00 38.30 3.55
6425 6555 5.452078 TGGAAAAAGAAATGTAGCCACAG 57.548 39.130 0.00 0.00 38.30 3.66
6426 6556 7.615365 AGATATGGAAAAAGAAATGTAGCCACA 59.385 33.333 0.00 0.00 39.52 4.17
6494 6624 3.182972 ACAGTACATTTTTCCGACGAACG 59.817 43.478 0.00 0.00 42.18 3.95
6588 6734 2.482864 CCAAGTGCCCAAACACAAATC 58.517 47.619 0.00 0.00 43.23 2.17
6716 6879 4.043200 GAACCGGCAAGCCACTGC 62.043 66.667 12.19 0.00 41.85 4.40
6752 6915 3.683365 ATTTTCACCATGGGTCTTTGC 57.317 42.857 18.09 0.00 31.02 3.68
6877 7080 6.014840 ACACTTATTTTGAGACGAAGGGAGTA 60.015 38.462 0.00 0.00 0.00 2.59
6878 7081 5.221661 ACACTTATTTTGAGACGAAGGGAGT 60.222 40.000 0.00 0.00 0.00 3.85
6879 7082 5.238583 ACACTTATTTTGAGACGAAGGGAG 58.761 41.667 0.00 0.00 0.00 4.30
6880 7083 5.011738 AGACACTTATTTTGAGACGAAGGGA 59.988 40.000 0.00 0.00 0.00 4.20
6881 7084 5.238583 AGACACTTATTTTGAGACGAAGGG 58.761 41.667 0.00 0.00 0.00 3.95
6882 7085 6.787085 AAGACACTTATTTTGAGACGAAGG 57.213 37.500 0.00 0.00 0.00 3.46
6883 7086 8.979574 AGTTAAGACACTTATTTTGAGACGAAG 58.020 33.333 0.00 0.00 0.00 3.79
6884 7087 8.882415 AGTTAAGACACTTATTTTGAGACGAA 57.118 30.769 0.00 0.00 0.00 3.85
6885 7088 8.882415 AAGTTAAGACACTTATTTTGAGACGA 57.118 30.769 0.00 0.00 35.10 4.20
6895 7098 9.819267 GAGCCAGTATAAAGTTAAGACACTTAT 57.181 33.333 0.00 0.00 35.87 1.73
6896 7099 9.032624 AGAGCCAGTATAAAGTTAAGACACTTA 57.967 33.333 0.00 0.00 35.87 2.24
6897 7100 7.908453 AGAGCCAGTATAAAGTTAAGACACTT 58.092 34.615 0.00 0.00 38.74 3.16
6898 7101 7.483580 AGAGCCAGTATAAAGTTAAGACACT 57.516 36.000 0.00 0.00 0.00 3.55
6899 7102 8.468399 ACTAGAGCCAGTATAAAGTTAAGACAC 58.532 37.037 0.00 0.00 0.00 3.67
6900 7103 8.591114 ACTAGAGCCAGTATAAAGTTAAGACA 57.409 34.615 0.00 0.00 0.00 3.41
6901 7104 9.949174 GTACTAGAGCCAGTATAAAGTTAAGAC 57.051 37.037 0.00 0.00 33.71 3.01
6902 7105 9.690913 TGTACTAGAGCCAGTATAAAGTTAAGA 57.309 33.333 0.00 0.00 33.71 2.10
6909 7112 9.953565 ACAAATTTGTACTAGAGCCAGTATAAA 57.046 29.630 22.10 12.08 42.52 1.40
6926 7129 9.338622 AGTGTCTTAAGCTTAGTACAAATTTGT 57.661 29.630 25.99 25.99 44.86 2.83
6936 7139 9.998106 TCTCAAAATAAGTGTCTTAAGCTTAGT 57.002 29.630 6.24 0.00 0.00 2.24
6939 7142 9.507329 TCATCTCAAAATAAGTGTCTTAAGCTT 57.493 29.630 3.48 3.48 0.00 3.74
6940 7143 9.507329 TTCATCTCAAAATAAGTGTCTTAAGCT 57.493 29.630 0.00 0.00 0.00 3.74
6941 7144 9.766277 CTTCATCTCAAAATAAGTGTCTTAAGC 57.234 33.333 0.00 0.00 0.00 3.09
6943 7146 9.231297 CCCTTCATCTCAAAATAAGTGTCTTAA 57.769 33.333 0.00 0.00 0.00 1.85
6944 7147 8.602424 TCCCTTCATCTCAAAATAAGTGTCTTA 58.398 33.333 0.00 0.00 0.00 2.10
6945 7148 7.461749 TCCCTTCATCTCAAAATAAGTGTCTT 58.538 34.615 0.00 0.00 0.00 3.01
6946 7149 7.020827 TCCCTTCATCTCAAAATAAGTGTCT 57.979 36.000 0.00 0.00 0.00 3.41
6947 7150 6.881602 ACTCCCTTCATCTCAAAATAAGTGTC 59.118 38.462 0.00 0.00 0.00 3.67
6948 7151 6.784031 ACTCCCTTCATCTCAAAATAAGTGT 58.216 36.000 0.00 0.00 0.00 3.55
6949 7152 8.043710 AGTACTCCCTTCATCTCAAAATAAGTG 58.956 37.037 0.00 0.00 0.00 3.16
6950 7153 8.152023 AGTACTCCCTTCATCTCAAAATAAGT 57.848 34.615 0.00 0.00 0.00 2.24
6954 7157 9.981460 AAATAAGTACTCCCTTCATCTCAAAAT 57.019 29.630 0.00 0.00 0.00 1.82
6955 7158 9.231297 CAAATAAGTACTCCCTTCATCTCAAAA 57.769 33.333 0.00 0.00 0.00 2.44
6956 7159 8.602424 TCAAATAAGTACTCCCTTCATCTCAAA 58.398 33.333 0.00 0.00 0.00 2.69
6957 7160 8.146053 TCAAATAAGTACTCCCTTCATCTCAA 57.854 34.615 0.00 0.00 0.00 3.02
6958 7161 7.733773 TCAAATAAGTACTCCCTTCATCTCA 57.266 36.000 0.00 0.00 0.00 3.27
6959 7162 8.261522 ACTTCAAATAAGTACTCCCTTCATCTC 58.738 37.037 0.00 0.00 0.00 2.75
6960 7163 8.043710 CACTTCAAATAAGTACTCCCTTCATCT 58.956 37.037 0.00 0.00 0.00 2.90
6961 7164 7.281100 CCACTTCAAATAAGTACTCCCTTCATC 59.719 40.741 0.00 0.00 0.00 2.92
6962 7165 7.112779 CCACTTCAAATAAGTACTCCCTTCAT 58.887 38.462 0.00 0.00 0.00 2.57
6963 7166 6.472887 CCACTTCAAATAAGTACTCCCTTCA 58.527 40.000 0.00 0.00 0.00 3.02
6964 7167 5.354513 GCCACTTCAAATAAGTACTCCCTTC 59.645 44.000 0.00 0.00 0.00 3.46
6965 7168 5.222048 TGCCACTTCAAATAAGTACTCCCTT 60.222 40.000 0.00 0.00 0.00 3.95
6966 7169 4.288626 TGCCACTTCAAATAAGTACTCCCT 59.711 41.667 0.00 0.00 0.00 4.20
6967 7170 4.585879 TGCCACTTCAAATAAGTACTCCC 58.414 43.478 0.00 0.00 0.00 4.30
6968 7171 7.520614 GCATATGCCACTTCAAATAAGTACTCC 60.521 40.741 17.26 0.00 34.31 3.85
6969 7172 7.012327 TGCATATGCCACTTCAAATAAGTACTC 59.988 37.037 24.54 0.00 41.18 2.59
6970 7173 6.828273 TGCATATGCCACTTCAAATAAGTACT 59.172 34.615 24.54 0.00 41.18 2.73
6971 7174 7.026631 TGCATATGCCACTTCAAATAAGTAC 57.973 36.000 24.54 0.00 41.18 2.73
6980 7183 4.220163 TGACAATTTGCATATGCCACTTCA 59.780 37.500 24.54 15.41 41.18 3.02
7005 7208 4.538490 TCAACCCCATTCTTATGTAGTGGT 59.462 41.667 0.00 0.00 0.00 4.16
7016 7232 1.279271 CCTCTTCGTCAACCCCATTCT 59.721 52.381 0.00 0.00 0.00 2.40
7070 7286 5.277058 GCGTATCAGAAAGATGGATTCACAC 60.277 44.000 0.00 0.00 37.57 3.82
7071 7287 4.811024 GCGTATCAGAAAGATGGATTCACA 59.189 41.667 0.00 0.00 37.57 3.58
7091 7307 3.507411 AGTGGGACCATATACTATGCGT 58.493 45.455 0.00 0.00 0.00 5.24
7202 7418 1.466856 TGCCAGAATCCATTCACTGC 58.533 50.000 2.21 2.37 39.23 4.40
7242 7458 1.204704 CGAGCATAGGGTCACAAGTGA 59.795 52.381 7.42 0.00 41.62 3.41
7243 7459 1.204704 TCGAGCATAGGGTCACAAGTG 59.795 52.381 7.42 0.00 41.62 3.16
7244 7460 1.204941 GTCGAGCATAGGGTCACAAGT 59.795 52.381 7.42 0.00 41.62 3.16
7283 7499 0.896940 CCAAGGCTGATGTGGCAACT 60.897 55.000 0.00 0.00 37.61 3.16
7319 7535 6.943146 TGTGACCAGCCTAATGTTGTATAAAA 59.057 34.615 0.00 0.00 0.00 1.52
7334 7550 0.967380 CCTTCCCATTGTGACCAGCC 60.967 60.000 0.00 0.00 0.00 4.85
7335 7551 0.038166 TCCTTCCCATTGTGACCAGC 59.962 55.000 0.00 0.00 0.00 4.85
7336 7552 2.584835 TTCCTTCCCATTGTGACCAG 57.415 50.000 0.00 0.00 0.00 4.00
7337 7553 3.541242 AATTCCTTCCCATTGTGACCA 57.459 42.857 0.00 0.00 0.00 4.02
7338 7554 5.261216 TCTAAATTCCTTCCCATTGTGACC 58.739 41.667 0.00 0.00 0.00 4.02
7339 7555 6.434340 ACTTCTAAATTCCTTCCCATTGTGAC 59.566 38.462 0.00 0.00 0.00 3.67
7340 7556 6.552008 ACTTCTAAATTCCTTCCCATTGTGA 58.448 36.000 0.00 0.00 0.00 3.58
7341 7557 6.840780 ACTTCTAAATTCCTTCCCATTGTG 57.159 37.500 0.00 0.00 0.00 3.33
7342 7558 7.947890 TGTTACTTCTAAATTCCTTCCCATTGT 59.052 33.333 0.00 0.00 0.00 2.71
7343 7559 8.348285 TGTTACTTCTAAATTCCTTCCCATTG 57.652 34.615 0.00 0.00 0.00 2.82
7344 7560 9.190317 GATGTTACTTCTAAATTCCTTCCCATT 57.810 33.333 0.00 0.00 0.00 3.16
7345 7561 8.336235 TGATGTTACTTCTAAATTCCTTCCCAT 58.664 33.333 0.17 0.00 0.00 4.00
7346 7562 7.610305 GTGATGTTACTTCTAAATTCCTTCCCA 59.390 37.037 0.17 0.00 0.00 4.37
7347 7563 7.610305 TGTGATGTTACTTCTAAATTCCTTCCC 59.390 37.037 0.17 0.00 0.00 3.97
7348 7564 8.451748 GTGTGATGTTACTTCTAAATTCCTTCC 58.548 37.037 0.17 0.00 0.00 3.46
7349 7565 8.999431 TGTGTGATGTTACTTCTAAATTCCTTC 58.001 33.333 0.17 0.00 0.00 3.46
7350 7566 8.784043 GTGTGTGATGTTACTTCTAAATTCCTT 58.216 33.333 0.17 0.00 0.00 3.36
7351 7567 8.157476 AGTGTGTGATGTTACTTCTAAATTCCT 58.843 33.333 0.17 0.00 0.00 3.36
7352 7568 8.324163 AGTGTGTGATGTTACTTCTAAATTCC 57.676 34.615 0.17 0.00 0.00 3.01
7353 7569 8.443937 GGAGTGTGTGATGTTACTTCTAAATTC 58.556 37.037 0.17 0.00 0.00 2.17
7354 7570 7.936847 TGGAGTGTGTGATGTTACTTCTAAATT 59.063 33.333 0.17 0.00 0.00 1.82
7355 7571 7.450074 TGGAGTGTGTGATGTTACTTCTAAAT 58.550 34.615 0.17 0.00 0.00 1.40
7356 7572 6.822442 TGGAGTGTGTGATGTTACTTCTAAA 58.178 36.000 0.17 0.00 0.00 1.85
7357 7573 6.413783 TGGAGTGTGTGATGTTACTTCTAA 57.586 37.500 0.17 0.00 0.00 2.10
7358 7574 6.413783 TTGGAGTGTGTGATGTTACTTCTA 57.586 37.500 0.17 0.00 0.00 2.10
7359 7575 4.955811 TGGAGTGTGTGATGTTACTTCT 57.044 40.909 0.17 0.00 0.00 2.85
7360 7576 6.649141 TGTATTGGAGTGTGTGATGTTACTTC 59.351 38.462 0.00 0.00 0.00 3.01
7361 7577 6.530120 TGTATTGGAGTGTGTGATGTTACTT 58.470 36.000 0.00 0.00 0.00 2.24
7362 7578 6.109156 TGTATTGGAGTGTGTGATGTTACT 57.891 37.500 0.00 0.00 0.00 2.24
7363 7579 6.426937 AGTTGTATTGGAGTGTGTGATGTTAC 59.573 38.462 0.00 0.00 0.00 2.50
7364 7580 6.530120 AGTTGTATTGGAGTGTGTGATGTTA 58.470 36.000 0.00 0.00 0.00 2.41
7365 7581 5.376625 AGTTGTATTGGAGTGTGTGATGTT 58.623 37.500 0.00 0.00 0.00 2.71
7366 7582 4.973168 AGTTGTATTGGAGTGTGTGATGT 58.027 39.130 0.00 0.00 0.00 3.06
7367 7583 5.947228 AAGTTGTATTGGAGTGTGTGATG 57.053 39.130 0.00 0.00 0.00 3.07
7368 7584 5.278463 GCAAAGTTGTATTGGAGTGTGTGAT 60.278 40.000 0.00 0.00 0.00 3.06
7369 7585 4.036262 GCAAAGTTGTATTGGAGTGTGTGA 59.964 41.667 0.00 0.00 0.00 3.58
7370 7586 4.036734 AGCAAAGTTGTATTGGAGTGTGTG 59.963 41.667 0.00 0.00 0.00 3.82
7371 7587 4.207165 AGCAAAGTTGTATTGGAGTGTGT 58.793 39.130 0.00 0.00 0.00 3.72
7372 7588 4.836125 AGCAAAGTTGTATTGGAGTGTG 57.164 40.909 0.00 0.00 0.00 3.82
7373 7589 6.490040 ACATAAGCAAAGTTGTATTGGAGTGT 59.510 34.615 0.00 0.00 0.00 3.55
7374 7590 6.803320 CACATAAGCAAAGTTGTATTGGAGTG 59.197 38.462 0.00 0.00 0.00 3.51
7375 7591 6.071952 CCACATAAGCAAAGTTGTATTGGAGT 60.072 38.462 0.00 0.00 0.00 3.85
7376 7592 6.324819 CCACATAAGCAAAGTTGTATTGGAG 58.675 40.000 0.00 0.00 0.00 3.86
7377 7593 5.336372 GCCACATAAGCAAAGTTGTATTGGA 60.336 40.000 0.00 0.00 0.00 3.53
7378 7594 4.864247 GCCACATAAGCAAAGTTGTATTGG 59.136 41.667 0.00 0.00 0.00 3.16
7379 7595 5.345741 GTGCCACATAAGCAAAGTTGTATTG 59.654 40.000 0.00 0.00 43.02 1.90
7380 7596 5.010516 TGTGCCACATAAGCAAAGTTGTATT 59.989 36.000 0.00 0.00 43.02 1.89
7381 7597 4.522405 TGTGCCACATAAGCAAAGTTGTAT 59.478 37.500 0.00 0.00 43.02 2.29
7382 7598 3.885901 TGTGCCACATAAGCAAAGTTGTA 59.114 39.130 0.00 0.00 43.02 2.41
7383 7599 2.692557 TGTGCCACATAAGCAAAGTTGT 59.307 40.909 0.00 0.00 43.02 3.32
7384 7600 3.367992 TGTGCCACATAAGCAAAGTTG 57.632 42.857 0.00 0.00 43.02 3.16
7385 7601 5.920193 ATATGTGCCACATAAGCAAAGTT 57.080 34.783 20.57 0.00 43.50 2.66
7386 7602 5.920193 AATATGTGCCACATAAGCAAAGT 57.080 34.783 20.57 0.54 43.50 2.66
7387 7603 8.757789 CATTAAATATGTGCCACATAAGCAAAG 58.242 33.333 20.57 8.50 43.50 2.77
7388 7604 8.473219 TCATTAAATATGTGCCACATAAGCAAA 58.527 29.630 20.57 12.83 43.50 3.68
7389 7605 8.005192 TCATTAAATATGTGCCACATAAGCAA 57.995 30.769 20.57 14.07 43.50 3.91
7390 7606 7.579761 TCATTAAATATGTGCCACATAAGCA 57.420 32.000 20.57 6.59 43.50 3.91
7391 7607 8.352201 TCTTCATTAAATATGTGCCACATAAGC 58.648 33.333 20.57 0.00 43.50 3.09
7392 7608 9.888878 CTCTTCATTAAATATGTGCCACATAAG 57.111 33.333 20.57 12.73 43.50 1.73
7393 7609 9.625747 TCTCTTCATTAAATATGTGCCACATAA 57.374 29.630 20.57 7.37 43.50 1.90
7394 7610 9.276590 CTCTCTTCATTAAATATGTGCCACATA 57.723 33.333 19.16 19.16 44.29 2.29
7395 7611 7.994911 TCTCTCTTCATTAAATATGTGCCACAT 59.005 33.333 15.69 15.69 42.35 3.21
7396 7612 7.337938 TCTCTCTTCATTAAATATGTGCCACA 58.662 34.615 0.00 0.00 0.00 4.17
7397 7613 7.041508 CCTCTCTCTTCATTAAATATGTGCCAC 60.042 40.741 0.00 0.00 0.00 5.01
7398 7614 6.994496 CCTCTCTCTTCATTAAATATGTGCCA 59.006 38.462 0.00 0.00 0.00 4.92
7399 7615 6.995091 ACCTCTCTCTTCATTAAATATGTGCC 59.005 38.462 0.00 0.00 0.00 5.01
7400 7616 7.519649 GCACCTCTCTCTTCATTAAATATGTGC 60.520 40.741 0.00 0.00 35.67 4.57
7401 7617 7.714377 AGCACCTCTCTCTTCATTAAATATGTG 59.286 37.037 0.00 0.00 0.00 3.21
7402 7618 7.800092 AGCACCTCTCTCTTCATTAAATATGT 58.200 34.615 0.00 0.00 0.00 2.29
7403 7619 8.557864 CAAGCACCTCTCTCTTCATTAAATATG 58.442 37.037 0.00 0.00 0.00 1.78
7404 7620 8.270744 ACAAGCACCTCTCTCTTCATTAAATAT 58.729 33.333 0.00 0.00 0.00 1.28
7405 7621 7.550551 CACAAGCACCTCTCTCTTCATTAAATA 59.449 37.037 0.00 0.00 0.00 1.40
7406 7622 6.373774 CACAAGCACCTCTCTCTTCATTAAAT 59.626 38.462 0.00 0.00 0.00 1.40
7407 7623 5.702670 CACAAGCACCTCTCTCTTCATTAAA 59.297 40.000 0.00 0.00 0.00 1.52
7408 7624 5.240891 CACAAGCACCTCTCTCTTCATTAA 58.759 41.667 0.00 0.00 0.00 1.40
7409 7625 4.323028 CCACAAGCACCTCTCTCTTCATTA 60.323 45.833 0.00 0.00 0.00 1.90
7410 7626 3.558746 CCACAAGCACCTCTCTCTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
7411 7627 2.027377 CCACAAGCACCTCTCTCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
7412 7628 1.345741 CCACAAGCACCTCTCTCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
7413 7629 1.346068 ACCACAAGCACCTCTCTCTTC 59.654 52.381 0.00 0.00 0.00 2.87
7414 7630 1.428869 ACCACAAGCACCTCTCTCTT 58.571 50.000 0.00 0.00 0.00 2.85
7415 7631 2.300437 GTTACCACAAGCACCTCTCTCT 59.700 50.000 0.00 0.00 0.00 3.10
7416 7632 2.300437 AGTTACCACAAGCACCTCTCTC 59.700 50.000 0.00 0.00 0.00 3.20
7417 7633 2.330216 AGTTACCACAAGCACCTCTCT 58.670 47.619 0.00 0.00 0.00 3.10
7418 7634 2.841442 AGTTACCACAAGCACCTCTC 57.159 50.000 0.00 0.00 0.00 3.20
7419 7635 2.028020 GCTAGTTACCACAAGCACCTCT 60.028 50.000 0.00 0.00 35.05 3.69
7420 7636 2.028020 AGCTAGTTACCACAAGCACCTC 60.028 50.000 0.00 0.00 37.44 3.85
7421 7637 1.978580 AGCTAGTTACCACAAGCACCT 59.021 47.619 0.00 0.00 37.44 4.00
7422 7638 2.474410 AGCTAGTTACCACAAGCACC 57.526 50.000 0.00 0.00 37.44 5.01
7423 7639 4.566987 ACTTAGCTAGTTACCACAAGCAC 58.433 43.478 0.00 0.00 37.44 4.40
7424 7640 4.884668 ACTTAGCTAGTTACCACAAGCA 57.115 40.909 0.00 0.00 37.44 3.91
7433 7649 6.377996 TGATGTTCCGGTAACTTAGCTAGTTA 59.622 38.462 0.00 10.09 45.22 2.24
7435 7651 4.708421 TGATGTTCCGGTAACTTAGCTAGT 59.292 41.667 0.00 0.00 38.99 2.57
7436 7652 5.041940 GTGATGTTCCGGTAACTTAGCTAG 58.958 45.833 0.00 0.00 38.99 3.42
7437 7653 4.463539 TGTGATGTTCCGGTAACTTAGCTA 59.536 41.667 0.00 0.00 38.99 3.32
7438 7654 3.259876 TGTGATGTTCCGGTAACTTAGCT 59.740 43.478 0.00 0.00 38.99 3.32
7439 7655 3.370061 GTGTGATGTTCCGGTAACTTAGC 59.630 47.826 0.00 0.00 38.99 3.09
7440 7656 4.387862 GTGTGTGATGTTCCGGTAACTTAG 59.612 45.833 0.00 0.00 38.99 2.18
7441 7657 4.039488 AGTGTGTGATGTTCCGGTAACTTA 59.961 41.667 0.00 0.00 38.99 2.24
7442 7658 3.135994 GTGTGTGATGTTCCGGTAACTT 58.864 45.455 0.00 3.15 38.99 2.66
7443 7659 2.367567 AGTGTGTGATGTTCCGGTAACT 59.632 45.455 0.00 0.00 38.99 2.24
7444 7660 2.735134 GAGTGTGTGATGTTCCGGTAAC 59.265 50.000 0.00 5.56 38.67 2.50
7445 7661 2.289195 GGAGTGTGTGATGTTCCGGTAA 60.289 50.000 0.00 0.00 0.00 2.85
7446 7662 1.274167 GGAGTGTGTGATGTTCCGGTA 59.726 52.381 0.00 0.00 0.00 4.02
7447 7663 0.034896 GGAGTGTGTGATGTTCCGGT 59.965 55.000 0.00 0.00 0.00 5.28
7448 7664 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.00 0.00 0.00 5.14
7449 7665 1.800586 CTTGGAGTGTGTGATGTTCCG 59.199 52.381 0.00 0.00 0.00 4.30
7450 7666 3.126001 TCTTGGAGTGTGTGATGTTCC 57.874 47.619 0.00 0.00 0.00 3.62
7451 7667 4.335315 TGTTTCTTGGAGTGTGTGATGTTC 59.665 41.667 0.00 0.00 0.00 3.18
7452 7668 4.269183 TGTTTCTTGGAGTGTGTGATGTT 58.731 39.130 0.00 0.00 0.00 2.71
7453 7669 3.884895 TGTTTCTTGGAGTGTGTGATGT 58.115 40.909 0.00 0.00 0.00 3.06
7454 7670 4.898829 TTGTTTCTTGGAGTGTGTGATG 57.101 40.909 0.00 0.00 0.00 3.07
7455 7671 5.132502 TCATTGTTTCTTGGAGTGTGTGAT 58.867 37.500 0.00 0.00 0.00 3.06
7456 7672 4.522114 TCATTGTTTCTTGGAGTGTGTGA 58.478 39.130 0.00 0.00 0.00 3.58
7457 7673 4.336433 ACTCATTGTTTCTTGGAGTGTGTG 59.664 41.667 0.00 0.00 37.43 3.82
7458 7674 4.526970 ACTCATTGTTTCTTGGAGTGTGT 58.473 39.130 0.00 0.00 37.43 3.72
7459 7675 4.818546 AGACTCATTGTTTCTTGGAGTGTG 59.181 41.667 0.00 0.00 38.82 3.82
7460 7676 5.041191 AGACTCATTGTTTCTTGGAGTGT 57.959 39.130 0.00 0.00 38.82 3.55
7461 7677 8.660373 GTTATAGACTCATTGTTTCTTGGAGTG 58.340 37.037 0.00 0.00 38.82 3.51
7462 7678 7.824779 GGTTATAGACTCATTGTTTCTTGGAGT 59.175 37.037 0.00 0.00 41.22 3.85
7463 7679 8.043710 AGGTTATAGACTCATTGTTTCTTGGAG 58.956 37.037 0.00 0.00 0.00 3.86
7464 7680 7.918076 AGGTTATAGACTCATTGTTTCTTGGA 58.082 34.615 0.00 0.00 0.00 3.53
7465 7681 9.667107 TTAGGTTATAGACTCATTGTTTCTTGG 57.333 33.333 0.00 0.00 0.00 3.61
7484 7700 9.549078 TCATGCAACGATGTATTTATTAGGTTA 57.451 29.630 0.00 0.00 28.42 2.85
7485 7701 8.342634 GTCATGCAACGATGTATTTATTAGGTT 58.657 33.333 0.00 0.00 28.42 3.50
7486 7702 7.497579 TGTCATGCAACGATGTATTTATTAGGT 59.502 33.333 0.00 0.00 28.42 3.08
7487 7703 7.798516 GTGTCATGCAACGATGTATTTATTAGG 59.201 37.037 0.00 0.00 28.42 2.69
7488 7704 8.551205 AGTGTCATGCAACGATGTATTTATTAG 58.449 33.333 0.00 0.00 28.42 1.73
7489 7705 8.432110 AGTGTCATGCAACGATGTATTTATTA 57.568 30.769 0.00 0.00 28.42 0.98
7490 7706 7.320443 AGTGTCATGCAACGATGTATTTATT 57.680 32.000 0.00 0.00 28.42 1.40
7491 7707 6.925610 AGTGTCATGCAACGATGTATTTAT 57.074 33.333 0.00 0.00 28.42 1.40
7492 7708 6.814146 TGTAGTGTCATGCAACGATGTATTTA 59.186 34.615 0.00 0.00 28.42 1.40
7493 7709 5.641636 TGTAGTGTCATGCAACGATGTATTT 59.358 36.000 0.00 0.00 28.42 1.40
7494 7710 5.175127 TGTAGTGTCATGCAACGATGTATT 58.825 37.500 0.00 0.00 28.42 1.89
7495 7711 4.754322 TGTAGTGTCATGCAACGATGTAT 58.246 39.130 0.00 0.00 31.41 2.29
7496 7712 4.181309 TGTAGTGTCATGCAACGATGTA 57.819 40.909 0.00 0.00 0.00 2.29
7497 7713 3.038788 TGTAGTGTCATGCAACGATGT 57.961 42.857 0.00 0.00 0.00 3.06
7498 7714 5.043248 TCTATGTAGTGTCATGCAACGATG 58.957 41.667 0.00 0.00 0.00 3.84
7499 7715 5.262588 TCTATGTAGTGTCATGCAACGAT 57.737 39.130 0.00 0.00 0.00 3.73
7500 7716 4.712122 TCTATGTAGTGTCATGCAACGA 57.288 40.909 0.00 0.00 0.00 3.85
7501 7717 4.805719 ACATCTATGTAGTGTCATGCAACG 59.194 41.667 0.00 0.00 39.68 4.10
7502 7718 6.238211 GGAACATCTATGTAGTGTCATGCAAC 60.238 42.308 0.00 0.00 40.80 4.17
7503 7719 5.817296 GGAACATCTATGTAGTGTCATGCAA 59.183 40.000 0.00 0.00 40.80 4.08
7504 7720 5.129320 AGGAACATCTATGTAGTGTCATGCA 59.871 40.000 0.00 0.00 40.80 3.96
7505 7721 5.605534 AGGAACATCTATGTAGTGTCATGC 58.394 41.667 0.00 0.00 40.80 4.06
7506 7722 7.148641 GGTAGGAACATCTATGTAGTGTCATG 58.851 42.308 0.00 0.00 40.80 3.07
7507 7723 6.267928 GGGTAGGAACATCTATGTAGTGTCAT 59.732 42.308 0.00 0.00 40.80 3.06
7508 7724 5.597182 GGGTAGGAACATCTATGTAGTGTCA 59.403 44.000 0.00 0.00 40.80 3.58
7509 7725 5.597182 TGGGTAGGAACATCTATGTAGTGTC 59.403 44.000 0.00 0.00 40.80 3.67
7510 7726 5.363005 GTGGGTAGGAACATCTATGTAGTGT 59.637 44.000 0.00 0.00 40.80 3.55
7511 7727 5.598830 AGTGGGTAGGAACATCTATGTAGTG 59.401 44.000 0.00 0.00 40.80 2.74
7512 7728 5.778542 AGTGGGTAGGAACATCTATGTAGT 58.221 41.667 0.00 0.00 40.80 2.73
7513 7729 7.670140 TCATAGTGGGTAGGAACATCTATGTAG 59.330 40.741 0.00 0.00 40.80 2.74
7514 7730 7.532199 TCATAGTGGGTAGGAACATCTATGTA 58.468 38.462 0.00 0.00 40.80 2.29
7515 7731 6.382087 TCATAGTGGGTAGGAACATCTATGT 58.618 40.000 0.00 0.00 44.20 2.29
7516 7732 6.918067 TCATAGTGGGTAGGAACATCTATG 57.082 41.667 0.00 0.00 35.64 2.23
7517 7733 6.498651 CCTTCATAGTGGGTAGGAACATCTAT 59.501 42.308 0.00 0.00 28.58 1.98
7518 7734 5.839063 CCTTCATAGTGGGTAGGAACATCTA 59.161 44.000 0.00 0.00 28.58 1.98
7519 7735 4.656112 CCTTCATAGTGGGTAGGAACATCT 59.344 45.833 0.00 0.00 28.58 2.90
7520 7736 4.409247 ACCTTCATAGTGGGTAGGAACATC 59.591 45.833 0.00 0.00 28.58 3.06
7521 7737 4.371681 ACCTTCATAGTGGGTAGGAACAT 58.628 43.478 0.00 0.00 28.58 2.71
7522 7738 3.798515 ACCTTCATAGTGGGTAGGAACA 58.201 45.455 0.00 0.00 28.58 3.18
7523 7739 5.532664 CTACCTTCATAGTGGGTAGGAAC 57.467 47.826 9.71 0.00 45.09 3.62
7528 7744 8.284435 ACTATGTTACTACCTTCATAGTGGGTA 58.716 37.037 13.45 0.00 45.91 3.69
7529 7745 7.130775 ACTATGTTACTACCTTCATAGTGGGT 58.869 38.462 13.45 0.00 45.91 4.51
7530 7746 7.506261 AGACTATGTTACTACCTTCATAGTGGG 59.494 40.741 17.43 0.00 46.89 4.61
7531 7747 8.466617 AGACTATGTTACTACCTTCATAGTGG 57.533 38.462 17.43 0.00 46.89 4.00
7536 7752 9.696572 TTCACTAGACTATGTTACTACCTTCAT 57.303 33.333 0.00 0.00 0.00 2.57
7537 7753 9.175312 CTTCACTAGACTATGTTACTACCTTCA 57.825 37.037 0.00 0.00 0.00 3.02
7538 7754 9.176460 ACTTCACTAGACTATGTTACTACCTTC 57.824 37.037 0.00 0.00 0.00 3.46
7539 7755 8.958506 CACTTCACTAGACTATGTTACTACCTT 58.041 37.037 0.00 0.00 0.00 3.50
7540 7756 8.108364 ACACTTCACTAGACTATGTTACTACCT 58.892 37.037 0.00 0.00 0.00 3.08
7541 7757 8.182881 CACACTTCACTAGACTATGTTACTACC 58.817 40.741 0.00 0.00 0.00 3.18
7542 7758 8.728833 ACACACTTCACTAGACTATGTTACTAC 58.271 37.037 0.00 0.00 0.00 2.73
7543 7759 8.859236 ACACACTTCACTAGACTATGTTACTA 57.141 34.615 0.00 0.00 0.00 1.82
7544 7760 7.762588 ACACACTTCACTAGACTATGTTACT 57.237 36.000 0.00 0.00 0.00 2.24
7545 7761 9.557338 CTTACACACTTCACTAGACTATGTTAC 57.443 37.037 0.00 0.00 0.00 2.50
7546 7762 9.293404 ACTTACACACTTCACTAGACTATGTTA 57.707 33.333 0.00 0.00 0.00 2.41
7547 7763 8.179509 ACTTACACACTTCACTAGACTATGTT 57.820 34.615 0.00 0.00 0.00 2.71
7548 7764 7.762588 ACTTACACACTTCACTAGACTATGT 57.237 36.000 0.00 0.00 0.00 2.29
7549 7765 9.557338 GTAACTTACACACTTCACTAGACTATG 57.443 37.037 0.00 0.00 0.00 2.23
7550 7766 9.517868 AGTAACTTACACACTTCACTAGACTAT 57.482 33.333 0.00 0.00 0.00 2.12
7551 7767 8.915057 AGTAACTTACACACTTCACTAGACTA 57.085 34.615 0.00 0.00 0.00 2.59
7552 7768 7.820578 AGTAACTTACACACTTCACTAGACT 57.179 36.000 0.00 0.00 0.00 3.24
7553 7769 7.750014 GCTAGTAACTTACACACTTCACTAGAC 59.250 40.741 9.08 0.00 37.49 2.59
7554 7770 7.664731 AGCTAGTAACTTACACACTTCACTAGA 59.335 37.037 9.08 0.00 37.49 2.43
7555 7771 7.818642 AGCTAGTAACTTACACACTTCACTAG 58.181 38.462 1.79 0.00 38.05 2.57
7556 7772 7.756395 AGCTAGTAACTTACACACTTCACTA 57.244 36.000 1.79 0.00 0.00 2.74
7557 7773 6.651975 AGCTAGTAACTTACACACTTCACT 57.348 37.500 1.79 0.00 0.00 3.41
7558 7774 8.983307 ATAAGCTAGTAACTTACACACTTCAC 57.017 34.615 1.79 0.00 32.67 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.