Multiple sequence alignment - TraesCS4B01G313300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G313300 chr4B 100.000 2540 0 0 1 2540 603146035 603143496 0.000000e+00 4691.0
1 TraesCS4B01G313300 chr4B 91.658 971 48 8 1570 2540 603024394 603023457 0.000000e+00 1314.0
2 TraesCS4B01G313300 chr4B 89.803 814 51 11 746 1531 602873976 602873167 0.000000e+00 1014.0
3 TraesCS4B01G313300 chr4B 89.233 808 51 10 749 1527 603037718 603038518 0.000000e+00 977.0
4 TraesCS4B01G313300 chr4B 88.930 813 56 10 746 1531 602893894 602893089 0.000000e+00 972.0
5 TraesCS4B01G313300 chr4B 88.700 823 54 11 746 1531 603148128 603148948 0.000000e+00 968.0
6 TraesCS4B01G313300 chr4B 91.881 505 40 1 1036 1540 603026133 603025630 0.000000e+00 704.0
7 TraesCS4B01G313300 chr4B 88.491 530 48 8 422 948 603029226 603028707 1.660000e-176 628.0
8 TraesCS4B01G313300 chr4B 82.051 195 32 1 497 691 51638501 51638692 2.020000e-36 163.0
9 TraesCS4B01G313300 chr4B 86.957 92 12 0 1550 1641 603148936 603149027 1.240000e-18 104.0
10 TraesCS4B01G313300 chr4D 89.111 1001 70 9 561 1531 477544037 477543046 0.000000e+00 1208.0
11 TraesCS4B01G313300 chr4D 89.512 820 49 14 746 1531 477558693 477559509 0.000000e+00 1003.0
12 TraesCS4B01G313300 chr4D 95.946 74 3 0 1550 1623 477559497 477559570 1.230000e-23 121.0
13 TraesCS4B01G313300 chr1B 90.000 640 62 2 1717 2354 269218899 269218260 0.000000e+00 826.0
14 TraesCS4B01G313300 chr1B 89.844 640 61 3 1717 2354 25227748 25227111 0.000000e+00 819.0
15 TraesCS4B01G313300 chr1B 89.720 642 58 7 1717 2354 644278204 644278841 0.000000e+00 813.0
16 TraesCS4B01G313300 chr1B 89.425 643 66 2 1717 2357 390272484 390273126 0.000000e+00 809.0
17 TraesCS4B01G313300 chr1B 89.392 641 66 2 1716 2354 636663161 636662521 0.000000e+00 806.0
18 TraesCS4B01G313300 chr1B 80.817 808 98 33 750 1523 402039891 402039107 4.710000e-162 580.0
19 TraesCS4B01G313300 chr1B 80.583 206 30 8 508 706 619104698 619104496 1.570000e-32 150.0
20 TraesCS4B01G313300 chr1B 78.788 231 42 6 508 735 372143132 372142906 5.660000e-32 148.0
21 TraesCS4B01G313300 chr7B 89.612 645 61 6 1717 2357 74093312 74092670 0.000000e+00 815.0
22 TraesCS4B01G313300 chr6B 89.147 645 68 2 1717 2359 611352258 611351614 0.000000e+00 802.0
23 TraesCS4B01G313300 chr5B 88.702 655 70 4 1717 2369 699779003 699778351 0.000000e+00 797.0
24 TraesCS4B01G313300 chr5B 92.289 415 32 0 1 415 311547662 311547248 7.830000e-165 590.0
25 TraesCS4B01G313300 chr4A 90.707 495 41 2 1041 1531 684471181 684471674 0.000000e+00 654.0
26 TraesCS4B01G313300 chr4A 90.121 496 36 4 1040 1526 684449280 684448789 1.280000e-177 632.0
27 TraesCS4B01G313300 chr4A 90.647 417 39 0 1 417 6819018 6819434 2.860000e-154 555.0
28 TraesCS4B01G313300 chr4A 91.030 301 20 4 736 1035 684470852 684471146 1.420000e-107 399.0
29 TraesCS4B01G313300 chr4A 90.196 204 16 2 746 945 684449825 684449622 1.940000e-66 263.0
30 TraesCS4B01G313300 chr4A 89.362 141 9 3 2356 2492 684448683 684448545 3.360000e-39 172.0
31 TraesCS4B01G313300 chr4A 93.243 74 5 0 1550 1623 684471662 684471735 2.670000e-20 110.0
32 TraesCS4B01G313300 chr4A 92.647 68 3 1 2475 2540 684448532 684448465 2.080000e-16 97.1
33 TraesCS4B01G313300 chr3D 92.048 415 33 0 1 415 562173722 562174136 3.640000e-163 584.0
34 TraesCS4B01G313300 chr3D 90.887 417 35 3 1 415 611553697 611554112 7.940000e-155 556.0
35 TraesCS4B01G313300 chr2B 91.106 416 37 0 1 416 800267661 800267246 4.740000e-157 564.0
36 TraesCS4B01G313300 chr1D 91.084 415 37 0 1 415 491721889 491721475 1.710000e-156 562.0
37 TraesCS4B01G313300 chr7D 90.887 417 36 2 1 416 185113955 185114370 2.210000e-155 558.0
38 TraesCS4B01G313300 chr7D 80.172 232 38 5 508 735 580887450 580887677 1.560000e-37 167.0
39 TraesCS4B01G313300 chr5D 91.063 414 36 1 1 414 547504659 547504247 2.210000e-155 558.0
40 TraesCS4B01G313300 chr2D 90.843 415 38 0 1 415 619938644 619938230 7.940000e-155 556.0
41 TraesCS4B01G313300 chr2A 81.933 238 27 8 508 735 97551445 97551214 1.200000e-43 187.0
42 TraesCS4B01G313300 chr3A 79.310 232 38 7 508 735 742039517 742039292 1.220000e-33 154.0
43 TraesCS4B01G313300 chr6D 77.824 239 39 8 508 737 5879055 5878822 4.410000e-28 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G313300 chr4B 603143496 603146035 2539 True 4691.000000 4691 100.000000 1 2540 1 chr4B.!!$R3 2539
1 TraesCS4B01G313300 chr4B 602873167 602873976 809 True 1014.000000 1014 89.803000 746 1531 1 chr4B.!!$R1 785
2 TraesCS4B01G313300 chr4B 603037718 603038518 800 False 977.000000 977 89.233000 749 1527 1 chr4B.!!$F2 778
3 TraesCS4B01G313300 chr4B 602893089 602893894 805 True 972.000000 972 88.930000 746 1531 1 chr4B.!!$R2 785
4 TraesCS4B01G313300 chr4B 603023457 603029226 5769 True 882.000000 1314 90.676667 422 2540 3 chr4B.!!$R4 2118
5 TraesCS4B01G313300 chr4B 603148128 603149027 899 False 536.000000 968 87.828500 746 1641 2 chr4B.!!$F3 895
6 TraesCS4B01G313300 chr4D 477543046 477544037 991 True 1208.000000 1208 89.111000 561 1531 1 chr4D.!!$R1 970
7 TraesCS4B01G313300 chr4D 477558693 477559570 877 False 562.000000 1003 92.729000 746 1623 2 chr4D.!!$F1 877
8 TraesCS4B01G313300 chr1B 269218260 269218899 639 True 826.000000 826 90.000000 1717 2354 1 chr1B.!!$R2 637
9 TraesCS4B01G313300 chr1B 25227111 25227748 637 True 819.000000 819 89.844000 1717 2354 1 chr1B.!!$R1 637
10 TraesCS4B01G313300 chr1B 644278204 644278841 637 False 813.000000 813 89.720000 1717 2354 1 chr1B.!!$F2 637
11 TraesCS4B01G313300 chr1B 390272484 390273126 642 False 809.000000 809 89.425000 1717 2357 1 chr1B.!!$F1 640
12 TraesCS4B01G313300 chr1B 636662521 636663161 640 True 806.000000 806 89.392000 1716 2354 1 chr1B.!!$R6 638
13 TraesCS4B01G313300 chr1B 402039107 402039891 784 True 580.000000 580 80.817000 750 1523 1 chr1B.!!$R4 773
14 TraesCS4B01G313300 chr7B 74092670 74093312 642 True 815.000000 815 89.612000 1717 2357 1 chr7B.!!$R1 640
15 TraesCS4B01G313300 chr6B 611351614 611352258 644 True 802.000000 802 89.147000 1717 2359 1 chr6B.!!$R1 642
16 TraesCS4B01G313300 chr5B 699778351 699779003 652 True 797.000000 797 88.702000 1717 2369 1 chr5B.!!$R2 652
17 TraesCS4B01G313300 chr4A 684470852 684471735 883 False 387.666667 654 91.660000 736 1623 3 chr4A.!!$F2 887
18 TraesCS4B01G313300 chr4A 684448465 684449825 1360 True 291.025000 632 90.581500 746 2540 4 chr4A.!!$R1 1794

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
528 529 0.033109 GTCCTTTGGGGCCTTAGCAT 60.033 55.0 0.84 0.0 42.56 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1870 5831 1.053424 AGGACACGAACCCTAGCAAA 58.947 50.0 0.0 0.0 0.0 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.842936 CCTAGCCCCCGTTCCGAT 60.843 66.667 0.00 0.00 0.00 4.18
20 21 2.421739 CTAGCCCCCGTTCCGATG 59.578 66.667 0.00 0.00 0.00 3.84
21 22 2.042741 TAGCCCCCGTTCCGATGA 60.043 61.111 0.00 0.00 0.00 2.92
22 23 1.458777 TAGCCCCCGTTCCGATGAT 60.459 57.895 0.00 0.00 0.00 2.45
23 24 1.754380 TAGCCCCCGTTCCGATGATG 61.754 60.000 0.00 0.00 0.00 3.07
24 25 2.591715 CCCCCGTTCCGATGATGC 60.592 66.667 0.00 0.00 0.00 3.91
25 26 2.189257 CCCCGTTCCGATGATGCA 59.811 61.111 0.00 0.00 0.00 3.96
26 27 1.227943 CCCCGTTCCGATGATGCAT 60.228 57.895 0.00 0.00 0.00 3.96
27 28 1.230635 CCCCGTTCCGATGATGCATC 61.231 60.000 20.14 20.14 37.50 3.91
28 29 0.250038 CCCGTTCCGATGATGCATCT 60.250 55.000 26.32 12.70 38.59 2.90
29 30 1.000843 CCCGTTCCGATGATGCATCTA 59.999 52.381 26.32 13.82 38.59 1.98
30 31 2.332104 CCGTTCCGATGATGCATCTAG 58.668 52.381 26.32 16.66 38.59 2.43
31 32 1.723542 CGTTCCGATGATGCATCTAGC 59.276 52.381 26.32 14.70 45.96 3.42
41 42 2.510948 GCATCTAGCATCGTCGGTG 58.489 57.895 0.00 0.00 44.79 4.94
42 43 0.941463 GCATCTAGCATCGTCGGTGG 60.941 60.000 7.76 0.00 44.79 4.61
43 44 0.319040 CATCTAGCATCGTCGGTGGG 60.319 60.000 7.76 0.00 0.00 4.61
44 45 2.088674 ATCTAGCATCGTCGGTGGGC 62.089 60.000 7.76 0.00 0.00 5.36
45 46 4.201679 TAGCATCGTCGGTGGGCG 62.202 66.667 7.76 0.00 0.00 6.13
48 49 4.735132 CATCGTCGGTGGGCGTGT 62.735 66.667 0.00 0.00 0.00 4.49
49 50 4.735132 ATCGTCGGTGGGCGTGTG 62.735 66.667 0.00 0.00 0.00 3.82
56 57 4.250305 GTGGGCGTGTGGAGGTGT 62.250 66.667 0.00 0.00 0.00 4.16
57 58 4.248842 TGGGCGTGTGGAGGTGTG 62.249 66.667 0.00 0.00 0.00 3.82
58 59 4.250305 GGGCGTGTGGAGGTGTGT 62.250 66.667 0.00 0.00 0.00 3.72
59 60 2.665185 GGCGTGTGGAGGTGTGTC 60.665 66.667 0.00 0.00 0.00 3.67
60 61 2.421739 GCGTGTGGAGGTGTGTCT 59.578 61.111 0.00 0.00 0.00 3.41
61 62 1.664965 GCGTGTGGAGGTGTGTCTC 60.665 63.158 0.00 0.00 0.00 3.36
66 67 2.657237 GGAGGTGTGTCTCCGGTG 59.343 66.667 0.00 0.00 43.19 4.94
67 68 2.657237 GAGGTGTGTCTCCGGTGG 59.343 66.667 0.00 0.00 0.00 4.61
68 69 1.906824 GAGGTGTGTCTCCGGTGGA 60.907 63.158 0.00 0.00 0.00 4.02
69 70 1.229209 AGGTGTGTCTCCGGTGGAT 60.229 57.895 0.00 0.00 0.00 3.41
70 71 0.836400 AGGTGTGTCTCCGGTGGATT 60.836 55.000 0.00 0.00 0.00 3.01
71 72 0.036306 GGTGTGTCTCCGGTGGATTT 59.964 55.000 0.00 0.00 0.00 2.17
72 73 1.156736 GTGTGTCTCCGGTGGATTTG 58.843 55.000 0.00 0.00 0.00 2.32
73 74 0.762418 TGTGTCTCCGGTGGATTTGT 59.238 50.000 0.00 0.00 0.00 2.83
74 75 1.270625 TGTGTCTCCGGTGGATTTGTC 60.271 52.381 0.00 0.00 0.00 3.18
75 76 1.002087 GTGTCTCCGGTGGATTTGTCT 59.998 52.381 0.00 0.00 0.00 3.41
76 77 1.697432 TGTCTCCGGTGGATTTGTCTT 59.303 47.619 0.00 0.00 0.00 3.01
77 78 2.105821 TGTCTCCGGTGGATTTGTCTTT 59.894 45.455 0.00 0.00 0.00 2.52
78 79 2.484264 GTCTCCGGTGGATTTGTCTTTG 59.516 50.000 0.00 0.00 0.00 2.77
79 80 1.812571 CTCCGGTGGATTTGTCTTTGG 59.187 52.381 0.00 0.00 0.00 3.28
80 81 1.144093 TCCGGTGGATTTGTCTTTGGT 59.856 47.619 0.00 0.00 0.00 3.67
81 82 1.269448 CCGGTGGATTTGTCTTTGGTG 59.731 52.381 0.00 0.00 0.00 4.17
82 83 1.269448 CGGTGGATTTGTCTTTGGTGG 59.731 52.381 0.00 0.00 0.00 4.61
83 84 2.593026 GGTGGATTTGTCTTTGGTGGA 58.407 47.619 0.00 0.00 0.00 4.02
84 85 3.165071 GGTGGATTTGTCTTTGGTGGAT 58.835 45.455 0.00 0.00 0.00 3.41
85 86 3.578282 GGTGGATTTGTCTTTGGTGGATT 59.422 43.478 0.00 0.00 0.00 3.01
86 87 4.040339 GGTGGATTTGTCTTTGGTGGATTT 59.960 41.667 0.00 0.00 0.00 2.17
87 88 4.990426 GTGGATTTGTCTTTGGTGGATTTG 59.010 41.667 0.00 0.00 0.00 2.32
88 89 3.996363 GGATTTGTCTTTGGTGGATTTGC 59.004 43.478 0.00 0.00 0.00 3.68
89 90 4.262592 GGATTTGTCTTTGGTGGATTTGCT 60.263 41.667 0.00 0.00 0.00 3.91
90 91 4.320608 TTTGTCTTTGGTGGATTTGCTC 57.679 40.909 0.00 0.00 0.00 4.26
91 92 1.879380 TGTCTTTGGTGGATTTGCTCG 59.121 47.619 0.00 0.00 0.00 5.03
92 93 2.151202 GTCTTTGGTGGATTTGCTCGA 58.849 47.619 0.00 0.00 0.00 4.04
93 94 2.552315 GTCTTTGGTGGATTTGCTCGAA 59.448 45.455 0.00 0.00 0.00 3.71
94 95 3.191371 GTCTTTGGTGGATTTGCTCGAAT 59.809 43.478 0.00 0.00 0.00 3.34
95 96 3.440173 TCTTTGGTGGATTTGCTCGAATC 59.560 43.478 2.00 2.00 35.71 2.52
96 97 2.787473 TGGTGGATTTGCTCGAATCT 57.213 45.000 9.11 0.00 36.50 2.40
97 98 2.358957 TGGTGGATTTGCTCGAATCTG 58.641 47.619 9.11 0.00 36.50 2.90
98 99 2.290260 TGGTGGATTTGCTCGAATCTGT 60.290 45.455 9.11 0.00 36.50 3.41
99 100 2.749621 GGTGGATTTGCTCGAATCTGTT 59.250 45.455 9.11 0.00 36.50 3.16
100 101 3.181506 GGTGGATTTGCTCGAATCTGTTC 60.182 47.826 9.11 0.00 36.50 3.18
111 112 1.647702 GAATCTGTTCGTCGTTCGTCC 59.352 52.381 0.00 0.00 40.80 4.79
112 113 0.879765 ATCTGTTCGTCGTTCGTCCT 59.120 50.000 0.00 0.00 40.80 3.85
113 114 0.664761 TCTGTTCGTCGTTCGTCCTT 59.335 50.000 0.00 0.00 40.80 3.36
114 115 1.872952 TCTGTTCGTCGTTCGTCCTTA 59.127 47.619 0.00 0.00 40.80 2.69
115 116 2.485426 TCTGTTCGTCGTTCGTCCTTAT 59.515 45.455 0.00 0.00 40.80 1.73
116 117 3.058016 TCTGTTCGTCGTTCGTCCTTATT 60.058 43.478 0.00 0.00 40.80 1.40
117 118 3.236816 TGTTCGTCGTTCGTCCTTATTC 58.763 45.455 0.00 0.00 40.80 1.75
118 119 3.236816 GTTCGTCGTTCGTCCTTATTCA 58.763 45.455 0.00 0.00 40.80 2.57
119 120 3.770263 TCGTCGTTCGTCCTTATTCAT 57.230 42.857 0.00 0.00 40.80 2.57
120 121 3.431856 TCGTCGTTCGTCCTTATTCATG 58.568 45.455 0.00 0.00 40.80 3.07
121 122 2.034842 CGTCGTTCGTCCTTATTCATGC 60.035 50.000 0.00 0.00 34.52 4.06
122 123 2.034842 GTCGTTCGTCCTTATTCATGCG 60.035 50.000 0.00 0.00 0.00 4.73
123 124 1.924524 CGTTCGTCCTTATTCATGCGT 59.075 47.619 0.00 0.00 0.00 5.24
124 125 2.034842 CGTTCGTCCTTATTCATGCGTC 60.035 50.000 0.00 0.00 0.00 5.19
125 126 3.187700 GTTCGTCCTTATTCATGCGTCT 58.812 45.455 0.00 0.00 0.00 4.18
126 127 3.520290 TCGTCCTTATTCATGCGTCTT 57.480 42.857 0.00 0.00 0.00 3.01
127 128 3.444916 TCGTCCTTATTCATGCGTCTTC 58.555 45.455 0.00 0.00 0.00 2.87
128 129 3.119280 TCGTCCTTATTCATGCGTCTTCA 60.119 43.478 0.00 0.00 0.00 3.02
129 130 3.243877 CGTCCTTATTCATGCGTCTTCAG 59.756 47.826 0.00 0.00 0.00 3.02
130 131 3.557595 GTCCTTATTCATGCGTCTTCAGG 59.442 47.826 0.00 0.00 0.00 3.86
131 132 3.197766 TCCTTATTCATGCGTCTTCAGGT 59.802 43.478 0.00 0.00 0.00 4.00
132 133 3.941483 CCTTATTCATGCGTCTTCAGGTT 59.059 43.478 0.00 0.00 0.00 3.50
133 134 4.201851 CCTTATTCATGCGTCTTCAGGTTG 60.202 45.833 0.00 0.00 0.00 3.77
134 135 1.522668 TTCATGCGTCTTCAGGTTGG 58.477 50.000 0.00 0.00 0.00 3.77
135 136 0.684535 TCATGCGTCTTCAGGTTGGA 59.315 50.000 0.00 0.00 0.00 3.53
136 137 1.278985 TCATGCGTCTTCAGGTTGGAT 59.721 47.619 0.00 0.00 0.00 3.41
137 138 1.667724 CATGCGTCTTCAGGTTGGATC 59.332 52.381 0.00 0.00 0.00 3.36
138 139 0.036388 TGCGTCTTCAGGTTGGATCC 60.036 55.000 4.20 4.20 0.00 3.36
139 140 0.250513 GCGTCTTCAGGTTGGATCCT 59.749 55.000 14.23 0.00 38.51 3.24
140 141 1.339151 GCGTCTTCAGGTTGGATCCTT 60.339 52.381 14.23 0.00 35.37 3.36
141 142 2.622436 CGTCTTCAGGTTGGATCCTTC 58.378 52.381 14.23 5.77 35.37 3.46
142 143 2.234908 CGTCTTCAGGTTGGATCCTTCT 59.765 50.000 14.23 4.81 35.37 2.85
143 144 3.307059 CGTCTTCAGGTTGGATCCTTCTT 60.307 47.826 14.23 0.00 35.37 2.52
144 145 4.081642 CGTCTTCAGGTTGGATCCTTCTTA 60.082 45.833 14.23 0.00 35.37 2.10
145 146 5.395768 CGTCTTCAGGTTGGATCCTTCTTAT 60.396 44.000 14.23 0.00 35.37 1.73
146 147 6.052360 GTCTTCAGGTTGGATCCTTCTTATC 58.948 44.000 14.23 0.00 35.37 1.75
147 148 5.966935 TCTTCAGGTTGGATCCTTCTTATCT 59.033 40.000 14.23 0.00 35.37 1.98
148 149 7.070074 GTCTTCAGGTTGGATCCTTCTTATCTA 59.930 40.741 14.23 0.00 35.37 1.98
149 150 6.732896 TCAGGTTGGATCCTTCTTATCTAC 57.267 41.667 14.23 0.00 35.37 2.59
150 151 6.202331 TCAGGTTGGATCCTTCTTATCTACA 58.798 40.000 14.23 0.00 35.37 2.74
151 152 6.098409 TCAGGTTGGATCCTTCTTATCTACAC 59.902 42.308 14.23 0.00 35.37 2.90
152 153 6.098982 CAGGTTGGATCCTTCTTATCTACACT 59.901 42.308 14.23 0.00 35.37 3.55
153 154 6.325286 AGGTTGGATCCTTCTTATCTACACTC 59.675 42.308 14.23 0.00 33.52 3.51
154 155 6.325286 GGTTGGATCCTTCTTATCTACACTCT 59.675 42.308 14.23 0.00 0.00 3.24
155 156 7.147637 GGTTGGATCCTTCTTATCTACACTCTT 60.148 40.741 14.23 0.00 0.00 2.85
156 157 7.589958 TGGATCCTTCTTATCTACACTCTTC 57.410 40.000 14.23 0.00 0.00 2.87
157 158 7.126061 TGGATCCTTCTTATCTACACTCTTCA 58.874 38.462 14.23 0.00 0.00 3.02
158 159 7.786943 TGGATCCTTCTTATCTACACTCTTCAT 59.213 37.037 14.23 0.00 0.00 2.57
159 160 8.303876 GGATCCTTCTTATCTACACTCTTCATC 58.696 40.741 3.84 0.00 0.00 2.92
160 161 8.774546 ATCCTTCTTATCTACACTCTTCATCA 57.225 34.615 0.00 0.00 0.00 3.07
161 162 8.231692 TCCTTCTTATCTACACTCTTCATCAG 57.768 38.462 0.00 0.00 0.00 2.90
162 163 6.922957 CCTTCTTATCTACACTCTTCATCAGC 59.077 42.308 0.00 0.00 0.00 4.26
163 164 6.066054 TCTTATCTACACTCTTCATCAGCG 57.934 41.667 0.00 0.00 0.00 5.18
164 165 3.724508 ATCTACACTCTTCATCAGCGG 57.275 47.619 0.00 0.00 0.00 5.52
165 166 1.135139 TCTACACTCTTCATCAGCGGC 59.865 52.381 0.00 0.00 0.00 6.53
166 167 0.179137 TACACTCTTCATCAGCGGCG 60.179 55.000 0.51 0.51 0.00 6.46
167 168 2.169789 CACTCTTCATCAGCGGCGG 61.170 63.158 9.78 0.00 0.00 6.13
168 169 2.185350 CTCTTCATCAGCGGCGGT 59.815 61.111 5.44 5.44 0.00 5.68
169 170 1.448540 CTCTTCATCAGCGGCGGTT 60.449 57.895 9.73 0.00 0.00 4.44
170 171 1.699656 CTCTTCATCAGCGGCGGTTG 61.700 60.000 9.73 6.66 0.00 3.77
171 172 3.386867 CTTCATCAGCGGCGGTTGC 62.387 63.158 9.73 0.00 41.71 4.17
172 173 3.899981 TTCATCAGCGGCGGTTGCT 62.900 57.895 9.73 0.00 45.31 3.91
179 180 3.726517 CGGCGGTTGCTGTTCTGG 61.727 66.667 0.00 0.00 42.79 3.86
180 181 2.594592 GGCGGTTGCTGTTCTGGT 60.595 61.111 0.00 0.00 42.25 4.00
181 182 2.639286 GCGGTTGCTGTTCTGGTG 59.361 61.111 0.00 0.00 38.39 4.17
182 183 2.639286 CGGTTGCTGTTCTGGTGC 59.361 61.111 0.00 0.00 0.00 5.01
183 184 2.639286 GGTTGCTGTTCTGGTGCG 59.361 61.111 0.00 0.00 0.00 5.34
184 185 2.186826 GGTTGCTGTTCTGGTGCGT 61.187 57.895 0.00 0.00 0.00 5.24
185 186 1.724582 GGTTGCTGTTCTGGTGCGTT 61.725 55.000 0.00 0.00 0.00 4.84
186 187 0.592247 GTTGCTGTTCTGGTGCGTTG 60.592 55.000 0.00 0.00 0.00 4.10
187 188 1.723608 TTGCTGTTCTGGTGCGTTGG 61.724 55.000 0.00 0.00 0.00 3.77
188 189 2.186826 GCTGTTCTGGTGCGTTGGT 61.187 57.895 0.00 0.00 0.00 3.67
189 190 1.724582 GCTGTTCTGGTGCGTTGGTT 61.725 55.000 0.00 0.00 0.00 3.67
190 191 0.307760 CTGTTCTGGTGCGTTGGTTC 59.692 55.000 0.00 0.00 0.00 3.62
191 192 0.107410 TGTTCTGGTGCGTTGGTTCT 60.107 50.000 0.00 0.00 0.00 3.01
192 193 1.139256 TGTTCTGGTGCGTTGGTTCTA 59.861 47.619 0.00 0.00 0.00 2.10
193 194 1.529865 GTTCTGGTGCGTTGGTTCTAC 59.470 52.381 0.00 0.00 0.00 2.59
194 195 0.319211 TCTGGTGCGTTGGTTCTACG 60.319 55.000 0.00 0.00 41.71 3.51
195 196 1.289109 CTGGTGCGTTGGTTCTACGG 61.289 60.000 0.00 0.00 39.31 4.02
196 197 2.030958 GGTGCGTTGGTTCTACGGG 61.031 63.158 0.00 0.00 39.31 5.28
197 198 2.030958 GTGCGTTGGTTCTACGGGG 61.031 63.158 0.00 0.00 39.31 5.73
198 199 3.122971 GCGTTGGTTCTACGGGGC 61.123 66.667 0.00 0.00 39.31 5.80
199 200 2.435410 CGTTGGTTCTACGGGGCC 60.435 66.667 0.00 0.00 35.47 5.80
200 201 2.951101 CGTTGGTTCTACGGGGCCT 61.951 63.158 0.84 0.00 35.47 5.19
201 202 1.377612 GTTGGTTCTACGGGGCCTT 59.622 57.895 0.84 0.00 0.00 4.35
202 203 0.614812 GTTGGTTCTACGGGGCCTTA 59.385 55.000 0.84 0.00 0.00 2.69
203 204 0.906775 TTGGTTCTACGGGGCCTTAG 59.093 55.000 0.84 4.88 0.00 2.18
204 205 1.145598 GGTTCTACGGGGCCTTAGC 59.854 63.158 0.84 0.00 38.76 3.09
205 206 1.619807 GGTTCTACGGGGCCTTAGCA 61.620 60.000 0.84 0.00 42.56 3.49
206 207 0.461516 GTTCTACGGGGCCTTAGCAC 60.462 60.000 0.84 1.59 43.97 4.40
207 208 1.952102 TTCTACGGGGCCTTAGCACG 61.952 60.000 0.84 0.00 46.55 5.34
208 209 2.362760 TACGGGGCCTTAGCACGA 60.363 61.111 0.84 0.00 46.55 4.35
209 210 2.624437 CTACGGGGCCTTAGCACGAC 62.624 65.000 0.84 0.00 46.55 4.34
211 212 3.766691 GGGGCCTTAGCACGACGA 61.767 66.667 0.84 0.00 46.55 4.20
212 213 2.508663 GGGCCTTAGCACGACGAC 60.509 66.667 0.84 0.00 42.56 4.34
213 214 2.572284 GGCCTTAGCACGACGACT 59.428 61.111 0.00 0.59 42.56 4.18
214 215 1.080025 GGCCTTAGCACGACGACTT 60.080 57.895 0.00 0.00 42.56 3.01
215 216 1.077089 GGCCTTAGCACGACGACTTC 61.077 60.000 0.00 0.00 42.56 3.01
216 217 1.077089 GCCTTAGCACGACGACTTCC 61.077 60.000 0.00 0.00 39.53 3.46
217 218 0.242825 CCTTAGCACGACGACTTCCA 59.757 55.000 0.00 0.00 0.00 3.53
218 219 1.618861 CTTAGCACGACGACTTCCAG 58.381 55.000 0.00 0.00 0.00 3.86
219 220 1.199327 CTTAGCACGACGACTTCCAGA 59.801 52.381 0.00 0.00 0.00 3.86
220 221 0.520404 TAGCACGACGACTTCCAGAC 59.480 55.000 0.00 0.00 0.00 3.51
221 222 1.173444 AGCACGACGACTTCCAGACT 61.173 55.000 0.00 0.00 0.00 3.24
222 223 1.004277 GCACGACGACTTCCAGACTG 61.004 60.000 0.00 0.00 0.00 3.51
223 224 0.311165 CACGACGACTTCCAGACTGT 59.689 55.000 0.00 0.00 0.00 3.55
224 225 0.592148 ACGACGACTTCCAGACTGTC 59.408 55.000 0.00 0.00 0.00 3.51
225 226 0.875728 CGACGACTTCCAGACTGTCT 59.124 55.000 4.06 4.06 0.00 3.41
226 227 2.074576 CGACGACTTCCAGACTGTCTA 58.925 52.381 10.47 0.00 0.00 2.59
227 228 2.159680 CGACGACTTCCAGACTGTCTAC 60.160 54.545 10.47 0.00 0.00 2.59
228 229 2.161030 ACGACTTCCAGACTGTCTACC 58.839 52.381 10.47 0.00 0.00 3.18
229 230 1.130749 CGACTTCCAGACTGTCTACCG 59.869 57.143 10.47 1.38 0.00 4.02
230 231 2.161030 GACTTCCAGACTGTCTACCGT 58.839 52.381 10.47 5.56 0.00 4.83
231 232 3.341823 GACTTCCAGACTGTCTACCGTA 58.658 50.000 10.47 0.00 0.00 4.02
232 233 3.755378 GACTTCCAGACTGTCTACCGTAA 59.245 47.826 10.47 0.47 0.00 3.18
233 234 3.505293 ACTTCCAGACTGTCTACCGTAAC 59.495 47.826 10.47 0.00 0.00 2.50
234 235 3.144657 TCCAGACTGTCTACCGTAACA 57.855 47.619 10.47 0.00 0.00 2.41
235 236 3.489355 TCCAGACTGTCTACCGTAACAA 58.511 45.455 10.47 0.00 0.00 2.83
236 237 3.504906 TCCAGACTGTCTACCGTAACAAG 59.495 47.826 10.47 0.00 0.00 3.16
237 238 3.367087 CCAGACTGTCTACCGTAACAAGG 60.367 52.174 10.47 0.00 0.00 3.61
238 239 3.255149 CAGACTGTCTACCGTAACAAGGT 59.745 47.826 10.47 0.00 45.28 3.50
239 240 3.893813 AGACTGTCTACCGTAACAAGGTT 59.106 43.478 8.91 0.00 42.81 3.50
240 241 4.343239 AGACTGTCTACCGTAACAAGGTTT 59.657 41.667 8.91 0.00 42.81 3.27
241 242 4.374399 ACTGTCTACCGTAACAAGGTTTG 58.626 43.478 0.00 0.00 42.81 2.93
242 243 3.132925 TGTCTACCGTAACAAGGTTTGC 58.867 45.455 0.00 0.00 42.81 3.68
243 244 3.181463 TGTCTACCGTAACAAGGTTTGCT 60.181 43.478 0.00 0.00 42.81 3.91
244 245 3.431233 GTCTACCGTAACAAGGTTTGCTC 59.569 47.826 0.00 0.00 42.81 4.26
245 246 1.223187 ACCGTAACAAGGTTTGCTCG 58.777 50.000 0.00 0.00 39.29 5.03
246 247 0.515564 CCGTAACAAGGTTTGCTCGG 59.484 55.000 0.00 0.00 36.06 4.63
247 248 0.110373 CGTAACAAGGTTTGCTCGGC 60.110 55.000 0.00 0.00 0.00 5.54
248 249 1.235724 GTAACAAGGTTTGCTCGGCT 58.764 50.000 0.00 0.00 0.00 5.52
249 250 1.197036 GTAACAAGGTTTGCTCGGCTC 59.803 52.381 0.00 0.00 0.00 4.70
250 251 1.172812 AACAAGGTTTGCTCGGCTCC 61.173 55.000 0.00 0.00 0.00 4.70
251 252 2.358737 AAGGTTTGCTCGGCTCCG 60.359 61.111 1.14 1.14 41.35 4.63
252 253 3.901797 AAGGTTTGCTCGGCTCCGG 62.902 63.158 8.59 0.00 40.25 5.14
262 263 4.840005 GGCTCCGGCGAAGGAAGG 62.840 72.222 9.30 0.00 40.25 3.46
263 264 4.840005 GCTCCGGCGAAGGAAGGG 62.840 72.222 9.30 0.00 40.25 3.95
264 265 3.391382 CTCCGGCGAAGGAAGGGT 61.391 66.667 9.30 0.00 40.25 4.34
265 266 3.665675 CTCCGGCGAAGGAAGGGTG 62.666 68.421 9.30 0.00 40.25 4.61
266 267 3.702048 CCGGCGAAGGAAGGGTGA 61.702 66.667 9.30 0.00 0.00 4.02
267 268 2.584608 CGGCGAAGGAAGGGTGAT 59.415 61.111 0.00 0.00 0.00 3.06
268 269 1.815421 CGGCGAAGGAAGGGTGATG 60.815 63.158 0.00 0.00 0.00 3.07
269 270 1.602237 GGCGAAGGAAGGGTGATGA 59.398 57.895 0.00 0.00 0.00 2.92
270 271 0.744771 GGCGAAGGAAGGGTGATGAC 60.745 60.000 0.00 0.00 0.00 3.06
271 272 0.036388 GCGAAGGAAGGGTGATGACA 60.036 55.000 0.00 0.00 0.00 3.58
272 273 2.009042 GCGAAGGAAGGGTGATGACAG 61.009 57.143 0.00 0.00 0.00 3.51
273 274 1.743996 GAAGGAAGGGTGATGACAGC 58.256 55.000 0.00 0.00 42.88 4.40
274 275 0.036010 AAGGAAGGGTGATGACAGCG 60.036 55.000 0.00 0.00 44.31 5.18
275 276 1.450312 GGAAGGGTGATGACAGCGG 60.450 63.158 0.00 0.00 44.31 5.52
276 277 2.045926 AAGGGTGATGACAGCGGC 60.046 61.111 0.00 0.00 44.31 6.53
277 278 3.958147 AAGGGTGATGACAGCGGCG 62.958 63.158 0.51 0.51 44.31 6.46
296 297 3.400007 GCCTTCGGCTCGCTTTAG 58.600 61.111 0.00 0.00 46.69 1.85
297 298 1.448013 GCCTTCGGCTCGCTTTAGT 60.448 57.895 0.00 0.00 46.69 2.24
298 299 1.696832 GCCTTCGGCTCGCTTTAGTG 61.697 60.000 0.00 0.00 46.69 2.74
299 300 1.696832 CCTTCGGCTCGCTTTAGTGC 61.697 60.000 0.00 0.00 0.00 4.40
300 301 0.737715 CTTCGGCTCGCTTTAGTGCT 60.738 55.000 0.00 0.00 0.00 4.40
301 302 0.320421 TTCGGCTCGCTTTAGTGCTT 60.320 50.000 0.00 0.00 0.00 3.91
302 303 1.014044 TCGGCTCGCTTTAGTGCTTG 61.014 55.000 0.00 0.00 0.00 4.01
303 304 1.291877 CGGCTCGCTTTAGTGCTTGT 61.292 55.000 0.00 0.00 0.00 3.16
304 305 1.722011 GGCTCGCTTTAGTGCTTGTA 58.278 50.000 0.00 0.00 0.00 2.41
305 306 1.661112 GGCTCGCTTTAGTGCTTGTAG 59.339 52.381 0.00 0.00 0.00 2.74
306 307 2.338500 GCTCGCTTTAGTGCTTGTAGT 58.662 47.619 0.00 0.00 0.00 2.73
307 308 2.345942 GCTCGCTTTAGTGCTTGTAGTC 59.654 50.000 0.00 0.00 0.00 2.59
308 309 2.592194 TCGCTTTAGTGCTTGTAGTCG 58.408 47.619 0.00 0.00 0.00 4.18
309 310 2.030540 TCGCTTTAGTGCTTGTAGTCGT 60.031 45.455 0.00 0.00 0.00 4.34
310 311 2.341760 CGCTTTAGTGCTTGTAGTCGTC 59.658 50.000 0.00 0.00 0.00 4.20
311 312 2.341760 GCTTTAGTGCTTGTAGTCGTCG 59.658 50.000 0.00 0.00 0.00 5.12
312 313 1.973138 TTAGTGCTTGTAGTCGTCGC 58.027 50.000 0.00 0.00 0.00 5.19
313 314 1.162698 TAGTGCTTGTAGTCGTCGCT 58.837 50.000 0.00 0.00 0.00 4.93
314 315 1.162698 AGTGCTTGTAGTCGTCGCTA 58.837 50.000 0.00 0.00 0.00 4.26
315 316 1.130749 AGTGCTTGTAGTCGTCGCTAG 59.869 52.381 0.00 0.00 0.00 3.42
316 317 0.450583 TGCTTGTAGTCGTCGCTAGG 59.549 55.000 0.00 0.00 0.00 3.02
317 318 0.450983 GCTTGTAGTCGTCGCTAGGT 59.549 55.000 0.00 0.00 0.00 3.08
318 319 1.794437 GCTTGTAGTCGTCGCTAGGTG 60.794 57.143 0.00 0.00 0.00 4.00
319 320 0.806868 TTGTAGTCGTCGCTAGGTGG 59.193 55.000 0.00 0.00 0.00 4.61
320 321 0.036105 TGTAGTCGTCGCTAGGTGGA 60.036 55.000 0.00 0.00 0.00 4.02
321 322 0.376502 GTAGTCGTCGCTAGGTGGAC 59.623 60.000 0.00 0.00 0.00 4.02
322 323 0.251354 TAGTCGTCGCTAGGTGGACT 59.749 55.000 0.00 0.00 40.72 3.85
323 324 0.251354 AGTCGTCGCTAGGTGGACTA 59.749 55.000 0.00 0.00 36.28 2.59
324 325 1.134159 AGTCGTCGCTAGGTGGACTAT 60.134 52.381 0.00 0.00 36.28 2.12
325 326 1.002684 GTCGTCGCTAGGTGGACTATG 60.003 57.143 0.00 0.00 0.00 2.23
326 327 0.311165 CGTCGCTAGGTGGACTATGG 59.689 60.000 0.00 0.00 0.00 2.74
327 328 1.688772 GTCGCTAGGTGGACTATGGA 58.311 55.000 0.00 0.00 0.00 3.41
328 329 2.240279 GTCGCTAGGTGGACTATGGAT 58.760 52.381 0.00 0.00 0.00 3.41
329 330 2.229302 GTCGCTAGGTGGACTATGGATC 59.771 54.545 0.00 0.00 0.00 3.36
330 331 2.108425 TCGCTAGGTGGACTATGGATCT 59.892 50.000 0.00 0.00 0.00 2.75
331 332 3.329814 TCGCTAGGTGGACTATGGATCTA 59.670 47.826 0.00 0.00 0.00 1.98
332 333 3.692101 CGCTAGGTGGACTATGGATCTAG 59.308 52.174 0.00 0.00 0.00 2.43
333 334 4.565861 CGCTAGGTGGACTATGGATCTAGA 60.566 50.000 0.00 0.00 0.00 2.43
334 335 5.515106 GCTAGGTGGACTATGGATCTAGAT 58.485 45.833 4.47 4.47 0.00 1.98
335 336 5.359576 GCTAGGTGGACTATGGATCTAGATG 59.640 48.000 10.74 0.00 0.00 2.90
336 337 5.346782 AGGTGGACTATGGATCTAGATGT 57.653 43.478 10.74 0.64 0.00 3.06
337 338 6.470456 AGGTGGACTATGGATCTAGATGTA 57.530 41.667 10.74 0.00 0.00 2.29
338 339 6.864421 AGGTGGACTATGGATCTAGATGTAA 58.136 40.000 10.74 0.00 0.00 2.41
339 340 7.483018 AGGTGGACTATGGATCTAGATGTAAT 58.517 38.462 10.74 3.49 0.00 1.89
340 341 7.958583 AGGTGGACTATGGATCTAGATGTAATT 59.041 37.037 10.74 0.00 0.00 1.40
341 342 8.598041 GGTGGACTATGGATCTAGATGTAATTT 58.402 37.037 10.74 0.00 0.00 1.82
342 343 9.429359 GTGGACTATGGATCTAGATGTAATTTG 57.571 37.037 10.74 0.00 0.00 2.32
343 344 9.159254 TGGACTATGGATCTAGATGTAATTTGT 57.841 33.333 10.74 0.40 0.00 2.83
371 372 9.539825 TTATTTTTAGTGTTCGTTGTACTACCA 57.460 29.630 1.76 0.00 0.00 3.25
372 373 8.611654 ATTTTTAGTGTTCGTTGTACTACCAT 57.388 30.769 1.76 0.00 0.00 3.55
373 374 7.410800 TTTTAGTGTTCGTTGTACTACCATG 57.589 36.000 1.76 0.00 0.00 3.66
374 375 4.859304 AGTGTTCGTTGTACTACCATGA 57.141 40.909 0.00 0.00 0.00 3.07
375 376 5.401531 AGTGTTCGTTGTACTACCATGAT 57.598 39.130 0.00 0.00 0.00 2.45
376 377 5.408356 AGTGTTCGTTGTACTACCATGATC 58.592 41.667 0.00 0.00 0.00 2.92
377 378 4.264614 GTGTTCGTTGTACTACCATGATCG 59.735 45.833 0.00 0.00 0.00 3.69
378 379 4.156373 TGTTCGTTGTACTACCATGATCGA 59.844 41.667 0.00 0.00 0.00 3.59
379 380 4.968812 TCGTTGTACTACCATGATCGAA 57.031 40.909 0.00 0.00 0.00 3.71
380 381 4.916870 TCGTTGTACTACCATGATCGAAG 58.083 43.478 0.00 0.00 0.00 3.79
381 382 4.637091 TCGTTGTACTACCATGATCGAAGA 59.363 41.667 0.00 0.00 45.75 2.87
382 383 5.298527 TCGTTGTACTACCATGATCGAAGAT 59.701 40.000 0.00 0.00 45.12 2.40
383 384 5.399596 CGTTGTACTACCATGATCGAAGATG 59.600 44.000 0.00 0.00 45.12 2.90
384 385 6.504398 GTTGTACTACCATGATCGAAGATGA 58.496 40.000 8.27 0.00 45.12 2.92
385 386 6.709018 TGTACTACCATGATCGAAGATGAA 57.291 37.500 8.27 0.00 45.12 2.57
386 387 7.290110 TGTACTACCATGATCGAAGATGAAT 57.710 36.000 8.27 0.64 45.12 2.57
387 388 8.404107 TGTACTACCATGATCGAAGATGAATA 57.596 34.615 8.27 1.57 45.12 1.75
388 389 8.515414 TGTACTACCATGATCGAAGATGAATAG 58.485 37.037 8.27 10.62 45.12 1.73
389 390 7.767250 ACTACCATGATCGAAGATGAATAGA 57.233 36.000 16.67 0.00 45.12 1.98
390 391 8.359875 ACTACCATGATCGAAGATGAATAGAT 57.640 34.615 16.67 0.00 45.12 1.98
391 392 8.465999 ACTACCATGATCGAAGATGAATAGATC 58.534 37.037 16.67 0.00 45.12 2.75
392 393 6.328714 ACCATGATCGAAGATGAATAGATCG 58.671 40.000 8.27 0.00 45.12 3.69
393 394 5.747675 CCATGATCGAAGATGAATAGATCGG 59.252 44.000 8.27 0.00 45.12 4.18
394 395 6.405176 CCATGATCGAAGATGAATAGATCGGA 60.405 42.308 8.27 0.00 45.12 4.55
395 396 6.575162 TGATCGAAGATGAATAGATCGGAA 57.425 37.500 0.00 0.00 45.12 4.30
396 397 6.616017 TGATCGAAGATGAATAGATCGGAAG 58.384 40.000 0.00 0.00 45.12 3.46
397 398 6.207614 TGATCGAAGATGAATAGATCGGAAGT 59.792 38.462 0.00 0.00 45.12 3.01
398 399 6.392625 TCGAAGATGAATAGATCGGAAGTT 57.607 37.500 0.00 0.00 34.47 2.66
399 400 6.806751 TCGAAGATGAATAGATCGGAAGTTT 58.193 36.000 0.00 0.00 34.47 2.66
400 401 7.937649 TCGAAGATGAATAGATCGGAAGTTTA 58.062 34.615 0.00 0.00 34.47 2.01
401 402 8.577296 TCGAAGATGAATAGATCGGAAGTTTAT 58.423 33.333 0.00 0.00 34.47 1.40
402 403 8.855279 CGAAGATGAATAGATCGGAAGTTTATC 58.145 37.037 0.00 0.00 0.00 1.75
403 404 9.145865 GAAGATGAATAGATCGGAAGTTTATCC 57.854 37.037 0.00 0.00 36.05 2.59
404 405 7.616313 AGATGAATAGATCGGAAGTTTATCCC 58.384 38.462 0.00 0.00 36.00 3.85
405 406 5.779922 TGAATAGATCGGAAGTTTATCCCG 58.220 41.667 0.00 0.00 44.22 5.14
406 407 2.528041 AGATCGGAAGTTTATCCCGC 57.472 50.000 0.00 0.00 42.70 6.13
407 408 1.760613 AGATCGGAAGTTTATCCCGCA 59.239 47.619 0.00 0.00 42.70 5.69
408 409 2.169769 AGATCGGAAGTTTATCCCGCAA 59.830 45.455 0.00 0.00 42.70 4.85
409 410 2.476126 TCGGAAGTTTATCCCGCAAA 57.524 45.000 0.00 0.00 42.70 3.68
410 411 2.780714 TCGGAAGTTTATCCCGCAAAA 58.219 42.857 0.00 0.00 42.70 2.44
411 412 3.147629 TCGGAAGTTTATCCCGCAAAAA 58.852 40.909 0.00 0.00 42.70 1.94
436 437 8.657074 AAAAGGGTTAAAACTATCACTTTTGC 57.343 30.769 3.70 0.00 36.08 3.68
437 438 6.969993 AGGGTTAAAACTATCACTTTTGCA 57.030 33.333 0.00 0.00 0.00 4.08
439 440 6.015434 AGGGTTAAAACTATCACTTTTGCAGG 60.015 38.462 0.00 0.00 0.00 4.85
440 441 6.015772 GGGTTAAAACTATCACTTTTGCAGGA 60.016 38.462 0.00 0.00 0.00 3.86
443 444 8.752254 GTTAAAACTATCACTTTTGCAGGAAAC 58.248 33.333 0.00 0.00 0.00 2.78
461 462 3.301794 AACCCCCGGTATTTTGGTATC 57.698 47.619 0.00 0.00 33.12 2.24
474 475 4.811969 TTTGGTATCGCGGGATATGTAT 57.188 40.909 23.09 0.85 37.47 2.29
505 506 9.999009 GGTTGATTAACTTAAAACTATAGTGCC 57.001 33.333 6.06 0.00 36.99 5.01
511 512 7.625828 AACTTAAAACTATAGTGCCATGGTC 57.374 36.000 14.67 6.41 0.00 4.02
512 513 6.120220 ACTTAAAACTATAGTGCCATGGTCC 58.880 40.000 14.67 4.01 0.00 4.46
515 516 4.862641 AACTATAGTGCCATGGTCCTTT 57.137 40.909 14.67 7.23 0.00 3.11
528 529 0.033109 GTCCTTTGGGGCCTTAGCAT 60.033 55.000 0.84 0.00 42.56 3.79
534 535 0.183492 TGGGGCCTTAGCATGATGAC 59.817 55.000 0.84 0.00 42.56 3.06
544 545 1.134580 AGCATGATGACTTCCCGACTG 60.135 52.381 0.00 0.00 0.00 3.51
548 549 3.081710 TGATGACTTCCCGACTGTCTA 57.918 47.619 6.21 0.00 0.00 2.59
552 553 3.341823 TGACTTCCCGACTGTCTACTAC 58.658 50.000 6.21 0.00 0.00 2.73
554 555 3.946558 GACTTCCCGACTGTCTACTACAT 59.053 47.826 6.21 0.00 37.50 2.29
558 559 4.338012 TCCCGACTGTCTACTACATCAAA 58.662 43.478 6.21 0.00 37.50 2.69
559 560 4.768448 TCCCGACTGTCTACTACATCAAAA 59.232 41.667 6.21 0.00 37.50 2.44
565 566 6.831769 ACTGTCTACTACATCAAAATTTGCG 58.168 36.000 0.00 0.00 37.50 4.85
589 590 2.364317 CGCTGAGGGAGGGGAGAA 60.364 66.667 0.00 0.00 0.00 2.87
592 593 0.399806 GCTGAGGGAGGGGAGAAGAT 60.400 60.000 0.00 0.00 0.00 2.40
598 599 2.041265 AGGGGAGAAGATGGCGGT 59.959 61.111 0.00 0.00 0.00 5.68
621 622 0.247736 CCTTTGGCTCGCTCTAGTGT 59.752 55.000 0.00 0.00 0.00 3.55
644 645 2.093288 TGTAGTCGTCGATAGGTGGTCT 60.093 50.000 0.00 0.00 0.00 3.85
652 653 5.187381 TCGTCGATAGGTGGTCTATAGATCT 59.813 44.000 14.10 0.00 40.49 2.75
675 676 9.762381 ATCTCCTGGTTGTAATTTTTATTACCA 57.238 29.630 0.00 0.00 36.46 3.25
825 832 9.492730 AGGATTAATATTCCAAAACCATCAGTT 57.507 29.630 4.28 0.00 36.55 3.16
978 3680 0.035152 AACAGCTCGATCCCATGCAA 60.035 50.000 0.00 0.00 0.00 4.08
991 3698 3.684113 TGCAAGCACGCATCCAAT 58.316 50.000 0.00 0.00 36.86 3.16
992 3699 2.865492 TGCAAGCACGCATCCAATA 58.135 47.368 0.00 0.00 36.86 1.90
993 3700 1.391577 TGCAAGCACGCATCCAATAT 58.608 45.000 0.00 0.00 36.86 1.28
1035 3744 1.206610 TCTCTCCAAGCTCTCATGCAC 59.793 52.381 0.00 0.00 34.99 4.57
1038 3780 2.110967 CCAAGCTCTCATGCACCCG 61.111 63.158 0.00 0.00 34.99 5.28
1070 3812 2.100749 ACGCTCACGATGACATCCAATA 59.899 45.455 9.87 0.00 43.93 1.90
1087 3829 2.679837 CAATACTGCCATCTTCGTTGCT 59.320 45.455 0.00 0.00 0.00 3.91
1096 3838 0.681733 TCTTCGTTGCTCTGAGCCTT 59.318 50.000 25.61 0.00 41.51 4.35
1280 4026 2.922503 TTCTCGGTGGCCTGCTCA 60.923 61.111 3.32 0.00 0.00 4.26
1294 4040 2.948720 GCTCAGCCTCAAGGTCGGT 61.949 63.158 0.00 0.00 37.57 4.69
1327 4073 2.672307 GAGTGCTGCCAGCTGCTT 60.672 61.111 18.96 10.10 42.97 3.91
1488 4234 1.151450 GCCCATCCCATTGACGGAT 59.849 57.895 0.00 0.00 40.94 4.18
1602 5563 3.334691 TCGTGTCCACATTTGAATCCTC 58.665 45.455 0.00 0.00 0.00 3.71
1745 5706 6.329197 TCCTCCTTCAAGAAAGAAAGTTAGGA 59.671 38.462 0.00 0.00 37.12 2.94
1828 5789 2.591753 CGTGGTGGATCCTGGCAT 59.408 61.111 14.23 0.00 37.07 4.40
1911 5872 2.359602 AGGAAGACGAGACGCCGA 60.360 61.111 0.00 0.00 0.00 5.54
2023 5985 5.531659 GTCTCCGACAGATCTATCTTTGGTA 59.468 44.000 0.00 0.00 34.22 3.25
2046 6008 0.179171 TTGCTCGGATCTCGTCGTTC 60.179 55.000 0.00 0.00 40.32 3.95
2111 6073 2.029828 ACGTTATTTTTCATTGGCGGCA 60.030 40.909 7.97 7.97 0.00 5.69
2128 6090 1.211949 GGCAGTTGCTATTCTGGGGTA 59.788 52.381 3.88 0.00 41.70 3.69
2129 6091 2.356741 GGCAGTTGCTATTCTGGGGTAA 60.357 50.000 3.88 0.00 41.70 2.85
2154 6116 0.687354 CTATGGGGCCTTAGCACGAT 59.313 55.000 0.84 0.00 46.55 3.73
2238 6201 3.050275 GCACCTTCGGCTCGCTTT 61.050 61.111 0.00 0.00 0.00 3.51
2268 6231 2.736347 AGTCGTTGCTAGGTGGTCTAT 58.264 47.619 0.00 0.00 0.00 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 0.941463 CCACCGACGATGCTAGATGC 60.941 60.000 0.00 0.00 43.25 3.91
24 25 0.319040 CCCACCGACGATGCTAGATG 60.319 60.000 0.00 0.00 0.00 2.90
25 26 2.041976 CCCACCGACGATGCTAGAT 58.958 57.895 0.00 0.00 0.00 1.98
26 27 2.782222 GCCCACCGACGATGCTAGA 61.782 63.158 0.00 0.00 0.00 2.43
27 28 2.279517 GCCCACCGACGATGCTAG 60.280 66.667 0.00 0.00 0.00 3.42
28 29 4.201679 CGCCCACCGACGATGCTA 62.202 66.667 0.00 0.00 40.02 3.49
31 32 4.735132 ACACGCCCACCGACGATG 62.735 66.667 0.00 0.00 41.02 3.84
32 33 4.735132 CACACGCCCACCGACGAT 62.735 66.667 0.00 0.00 41.02 3.73
39 40 4.250305 ACACCTCCACACGCCCAC 62.250 66.667 0.00 0.00 0.00 4.61
40 41 4.248842 CACACCTCCACACGCCCA 62.249 66.667 0.00 0.00 0.00 5.36
41 42 4.250305 ACACACCTCCACACGCCC 62.250 66.667 0.00 0.00 0.00 6.13
42 43 2.665185 GACACACCTCCACACGCC 60.665 66.667 0.00 0.00 0.00 5.68
43 44 1.664965 GAGACACACCTCCACACGC 60.665 63.158 0.00 0.00 0.00 5.34
44 45 4.655527 GAGACACACCTCCACACG 57.344 61.111 0.00 0.00 0.00 4.49
50 51 1.258445 ATCCACCGGAGACACACCTC 61.258 60.000 9.46 0.00 34.05 3.85
51 52 0.836400 AATCCACCGGAGACACACCT 60.836 55.000 9.46 0.00 34.05 4.00
52 53 0.036306 AAATCCACCGGAGACACACC 59.964 55.000 9.46 0.00 34.05 4.16
53 54 1.156736 CAAATCCACCGGAGACACAC 58.843 55.000 9.46 0.00 34.05 3.82
54 55 0.762418 ACAAATCCACCGGAGACACA 59.238 50.000 9.46 0.00 34.05 3.72
55 56 1.002087 AGACAAATCCACCGGAGACAC 59.998 52.381 9.46 0.00 34.05 3.67
56 57 1.348064 AGACAAATCCACCGGAGACA 58.652 50.000 9.46 0.00 34.05 3.41
57 58 2.474410 AAGACAAATCCACCGGAGAC 57.526 50.000 9.46 0.00 34.05 3.36
58 59 2.552155 CCAAAGACAAATCCACCGGAGA 60.552 50.000 9.46 4.59 34.05 3.71
59 60 1.812571 CCAAAGACAAATCCACCGGAG 59.187 52.381 9.46 0.00 34.05 4.63
60 61 1.144093 ACCAAAGACAAATCCACCGGA 59.856 47.619 9.46 0.00 35.55 5.14
61 62 1.269448 CACCAAAGACAAATCCACCGG 59.731 52.381 0.00 0.00 0.00 5.28
62 63 1.269448 CCACCAAAGACAAATCCACCG 59.731 52.381 0.00 0.00 0.00 4.94
63 64 2.593026 TCCACCAAAGACAAATCCACC 58.407 47.619 0.00 0.00 0.00 4.61
64 65 4.871933 AATCCACCAAAGACAAATCCAC 57.128 40.909 0.00 0.00 0.00 4.02
65 66 4.502950 GCAAATCCACCAAAGACAAATCCA 60.503 41.667 0.00 0.00 0.00 3.41
66 67 3.996363 GCAAATCCACCAAAGACAAATCC 59.004 43.478 0.00 0.00 0.00 3.01
67 68 4.886579 AGCAAATCCACCAAAGACAAATC 58.113 39.130 0.00 0.00 0.00 2.17
68 69 4.559300 CGAGCAAATCCACCAAAGACAAAT 60.559 41.667 0.00 0.00 0.00 2.32
69 70 3.243367 CGAGCAAATCCACCAAAGACAAA 60.243 43.478 0.00 0.00 0.00 2.83
70 71 2.293122 CGAGCAAATCCACCAAAGACAA 59.707 45.455 0.00 0.00 0.00 3.18
71 72 1.879380 CGAGCAAATCCACCAAAGACA 59.121 47.619 0.00 0.00 0.00 3.41
72 73 2.151202 TCGAGCAAATCCACCAAAGAC 58.849 47.619 0.00 0.00 0.00 3.01
73 74 2.559698 TCGAGCAAATCCACCAAAGA 57.440 45.000 0.00 0.00 0.00 2.52
74 75 3.441572 AGATTCGAGCAAATCCACCAAAG 59.558 43.478 3.66 0.00 36.49 2.77
75 76 3.191162 CAGATTCGAGCAAATCCACCAAA 59.809 43.478 3.66 0.00 36.49 3.28
76 77 2.749076 CAGATTCGAGCAAATCCACCAA 59.251 45.455 3.66 0.00 36.49 3.67
77 78 2.290260 ACAGATTCGAGCAAATCCACCA 60.290 45.455 3.66 0.00 36.49 4.17
78 79 2.359900 ACAGATTCGAGCAAATCCACC 58.640 47.619 3.66 0.00 36.49 4.61
79 80 4.008539 GAACAGATTCGAGCAAATCCAC 57.991 45.455 3.66 0.00 36.49 4.02
91 92 1.647702 GGACGAACGACGAACAGATTC 59.352 52.381 0.00 0.00 45.77 2.52
92 93 1.268899 AGGACGAACGACGAACAGATT 59.731 47.619 0.00 0.00 45.77 2.40
93 94 0.879765 AGGACGAACGACGAACAGAT 59.120 50.000 0.00 0.00 45.77 2.90
94 95 0.664761 AAGGACGAACGACGAACAGA 59.335 50.000 0.00 0.00 45.77 3.41
95 96 2.320805 TAAGGACGAACGACGAACAG 57.679 50.000 0.00 0.00 45.77 3.16
96 97 2.995466 ATAAGGACGAACGACGAACA 57.005 45.000 0.00 0.00 45.77 3.18
97 98 3.236816 TGAATAAGGACGAACGACGAAC 58.763 45.455 0.00 0.00 45.77 3.95
98 99 3.557577 TGAATAAGGACGAACGACGAA 57.442 42.857 0.00 0.00 45.77 3.85
99 100 3.431856 CATGAATAAGGACGAACGACGA 58.568 45.455 0.00 0.00 45.77 4.20
101 102 2.034842 CGCATGAATAAGGACGAACGAC 60.035 50.000 0.00 0.00 0.00 4.34
102 103 2.190161 CGCATGAATAAGGACGAACGA 58.810 47.619 0.00 0.00 0.00 3.85
103 104 1.924524 ACGCATGAATAAGGACGAACG 59.075 47.619 0.00 0.00 0.00 3.95
104 105 3.187700 AGACGCATGAATAAGGACGAAC 58.812 45.455 0.00 0.00 0.00 3.95
105 106 3.520290 AGACGCATGAATAAGGACGAA 57.480 42.857 0.00 0.00 0.00 3.85
106 107 3.119280 TGAAGACGCATGAATAAGGACGA 60.119 43.478 0.00 0.00 0.00 4.20
107 108 3.186909 TGAAGACGCATGAATAAGGACG 58.813 45.455 0.00 0.00 0.00 4.79
108 109 3.557595 CCTGAAGACGCATGAATAAGGAC 59.442 47.826 0.00 0.00 0.00 3.85
109 110 3.197766 ACCTGAAGACGCATGAATAAGGA 59.802 43.478 0.00 0.00 0.00 3.36
110 111 3.535561 ACCTGAAGACGCATGAATAAGG 58.464 45.455 0.00 0.00 0.00 2.69
111 112 4.201851 CCAACCTGAAGACGCATGAATAAG 60.202 45.833 0.00 0.00 0.00 1.73
112 113 3.689161 CCAACCTGAAGACGCATGAATAA 59.311 43.478 0.00 0.00 0.00 1.40
113 114 3.055458 TCCAACCTGAAGACGCATGAATA 60.055 43.478 0.00 0.00 0.00 1.75
114 115 2.086869 CCAACCTGAAGACGCATGAAT 58.913 47.619 0.00 0.00 0.00 2.57
115 116 1.071542 TCCAACCTGAAGACGCATGAA 59.928 47.619 0.00 0.00 0.00 2.57
116 117 0.684535 TCCAACCTGAAGACGCATGA 59.315 50.000 0.00 0.00 0.00 3.07
117 118 1.667724 GATCCAACCTGAAGACGCATG 59.332 52.381 0.00 0.00 0.00 4.06
118 119 1.407437 GGATCCAACCTGAAGACGCAT 60.407 52.381 6.95 0.00 0.00 4.73
119 120 0.036388 GGATCCAACCTGAAGACGCA 60.036 55.000 6.95 0.00 0.00 5.24
120 121 0.250513 AGGATCCAACCTGAAGACGC 59.749 55.000 15.82 0.00 39.01 5.19
121 122 2.234908 AGAAGGATCCAACCTGAAGACG 59.765 50.000 15.82 0.00 40.49 4.18
122 123 3.990959 AGAAGGATCCAACCTGAAGAC 57.009 47.619 15.82 0.00 40.49 3.01
123 124 5.966935 AGATAAGAAGGATCCAACCTGAAGA 59.033 40.000 15.82 0.00 40.49 2.87
124 125 6.245890 AGATAAGAAGGATCCAACCTGAAG 57.754 41.667 15.82 0.00 40.49 3.02
125 126 6.672218 TGTAGATAAGAAGGATCCAACCTGAA 59.328 38.462 15.82 0.80 40.49 3.02
126 127 6.098409 GTGTAGATAAGAAGGATCCAACCTGA 59.902 42.308 15.82 0.91 40.49 3.86
127 128 6.098982 AGTGTAGATAAGAAGGATCCAACCTG 59.901 42.308 15.82 0.00 40.49 4.00
128 129 6.206042 AGTGTAGATAAGAAGGATCCAACCT 58.794 40.000 15.82 4.58 42.69 3.50
129 130 6.325286 AGAGTGTAGATAAGAAGGATCCAACC 59.675 42.308 15.82 2.02 0.00 3.77
130 131 7.354751 AGAGTGTAGATAAGAAGGATCCAAC 57.645 40.000 15.82 7.32 0.00 3.77
131 132 7.619698 TGAAGAGTGTAGATAAGAAGGATCCAA 59.380 37.037 15.82 0.00 0.00 3.53
132 133 7.126061 TGAAGAGTGTAGATAAGAAGGATCCA 58.874 38.462 15.82 0.00 0.00 3.41
133 134 7.589958 TGAAGAGTGTAGATAAGAAGGATCC 57.410 40.000 2.48 2.48 0.00 3.36
134 135 8.855110 TGATGAAGAGTGTAGATAAGAAGGATC 58.145 37.037 0.00 0.00 0.00 3.36
135 136 8.774546 TGATGAAGAGTGTAGATAAGAAGGAT 57.225 34.615 0.00 0.00 0.00 3.24
136 137 7.201866 GCTGATGAAGAGTGTAGATAAGAAGGA 60.202 40.741 0.00 0.00 0.00 3.36
137 138 6.922957 GCTGATGAAGAGTGTAGATAAGAAGG 59.077 42.308 0.00 0.00 0.00 3.46
138 139 6.636447 CGCTGATGAAGAGTGTAGATAAGAAG 59.364 42.308 0.00 0.00 0.00 2.85
139 140 6.460261 CCGCTGATGAAGAGTGTAGATAAGAA 60.460 42.308 0.00 0.00 0.00 2.52
140 141 5.009110 CCGCTGATGAAGAGTGTAGATAAGA 59.991 44.000 0.00 0.00 0.00 2.10
141 142 5.218885 CCGCTGATGAAGAGTGTAGATAAG 58.781 45.833 0.00 0.00 0.00 1.73
142 143 4.499865 GCCGCTGATGAAGAGTGTAGATAA 60.500 45.833 0.00 0.00 0.00 1.75
143 144 3.004839 GCCGCTGATGAAGAGTGTAGATA 59.995 47.826 0.00 0.00 0.00 1.98
144 145 2.223923 GCCGCTGATGAAGAGTGTAGAT 60.224 50.000 0.00 0.00 0.00 1.98
145 146 1.135139 GCCGCTGATGAAGAGTGTAGA 59.865 52.381 0.00 0.00 0.00 2.59
146 147 1.565305 GCCGCTGATGAAGAGTGTAG 58.435 55.000 0.00 0.00 0.00 2.74
147 148 0.179137 CGCCGCTGATGAAGAGTGTA 60.179 55.000 0.00 0.00 0.00 2.90
148 149 1.446792 CGCCGCTGATGAAGAGTGT 60.447 57.895 0.00 0.00 0.00 3.55
149 150 2.169789 CCGCCGCTGATGAAGAGTG 61.170 63.158 0.00 0.00 0.00 3.51
150 151 2.172483 AACCGCCGCTGATGAAGAGT 62.172 55.000 0.00 0.00 0.00 3.24
151 152 1.448540 AACCGCCGCTGATGAAGAG 60.449 57.895 0.00 0.00 0.00 2.85
152 153 1.741401 CAACCGCCGCTGATGAAGA 60.741 57.895 0.00 0.00 0.00 2.87
153 154 2.787249 CAACCGCCGCTGATGAAG 59.213 61.111 0.00 0.00 0.00 3.02
154 155 3.430862 GCAACCGCCGCTGATGAA 61.431 61.111 0.00 0.00 0.00 2.57
155 156 4.393155 AGCAACCGCCGCTGATGA 62.393 61.111 0.00 0.00 38.60 2.92
160 161 4.626081 AGAACAGCAACCGCCGCT 62.626 61.111 0.00 0.00 41.47 5.52
161 162 4.389576 CAGAACAGCAACCGCCGC 62.390 66.667 0.00 0.00 39.83 6.53
162 163 3.726517 CCAGAACAGCAACCGCCG 61.727 66.667 0.00 0.00 39.83 6.46
163 164 2.594592 ACCAGAACAGCAACCGCC 60.595 61.111 0.00 0.00 39.83 6.13
164 165 2.639286 CACCAGAACAGCAACCGC 59.361 61.111 0.00 0.00 38.99 5.68
165 166 2.639286 GCACCAGAACAGCAACCG 59.361 61.111 0.00 0.00 0.00 4.44
166 167 1.724582 AACGCACCAGAACAGCAACC 61.725 55.000 0.00 0.00 0.00 3.77
167 168 0.592247 CAACGCACCAGAACAGCAAC 60.592 55.000 0.00 0.00 0.00 4.17
168 169 1.723608 CCAACGCACCAGAACAGCAA 61.724 55.000 0.00 0.00 0.00 3.91
169 170 2.186160 CCAACGCACCAGAACAGCA 61.186 57.895 0.00 0.00 0.00 4.41
170 171 1.724582 AACCAACGCACCAGAACAGC 61.725 55.000 0.00 0.00 0.00 4.40
171 172 0.307760 GAACCAACGCACCAGAACAG 59.692 55.000 0.00 0.00 0.00 3.16
172 173 0.107410 AGAACCAACGCACCAGAACA 60.107 50.000 0.00 0.00 0.00 3.18
173 174 1.529865 GTAGAACCAACGCACCAGAAC 59.470 52.381 0.00 0.00 0.00 3.01
174 175 1.870580 CGTAGAACCAACGCACCAGAA 60.871 52.381 0.00 0.00 33.04 3.02
175 176 0.319211 CGTAGAACCAACGCACCAGA 60.319 55.000 0.00 0.00 33.04 3.86
176 177 1.289109 CCGTAGAACCAACGCACCAG 61.289 60.000 0.00 0.00 39.00 4.00
177 178 1.301087 CCGTAGAACCAACGCACCA 60.301 57.895 0.00 0.00 39.00 4.17
178 179 2.030958 CCCGTAGAACCAACGCACC 61.031 63.158 0.00 0.00 39.00 5.01
179 180 2.030958 CCCCGTAGAACCAACGCAC 61.031 63.158 0.00 0.00 39.00 5.34
180 181 2.344500 CCCCGTAGAACCAACGCA 59.656 61.111 0.00 0.00 39.00 5.24
181 182 3.122971 GCCCCGTAGAACCAACGC 61.123 66.667 0.00 0.00 39.00 4.84
182 183 2.435410 GGCCCCGTAGAACCAACG 60.435 66.667 0.00 0.00 40.01 4.10
183 184 0.614812 TAAGGCCCCGTAGAACCAAC 59.385 55.000 0.00 0.00 0.00 3.77
184 185 0.906775 CTAAGGCCCCGTAGAACCAA 59.093 55.000 0.00 0.00 31.27 3.67
185 186 1.619807 GCTAAGGCCCCGTAGAACCA 61.620 60.000 10.83 0.00 31.27 3.67
186 187 1.145598 GCTAAGGCCCCGTAGAACC 59.854 63.158 10.83 0.00 31.27 3.62
187 188 0.461516 GTGCTAAGGCCCCGTAGAAC 60.462 60.000 10.83 7.00 37.74 3.01
188 189 1.902556 GTGCTAAGGCCCCGTAGAA 59.097 57.895 10.83 0.00 37.74 2.10
189 190 2.420568 CGTGCTAAGGCCCCGTAGA 61.421 63.158 10.83 0.00 37.74 2.59
190 191 2.106332 CGTGCTAAGGCCCCGTAG 59.894 66.667 0.00 0.00 37.74 3.51
191 192 2.362760 TCGTGCTAAGGCCCCGTA 60.363 61.111 0.00 0.00 37.74 4.02
192 193 4.078516 GTCGTGCTAAGGCCCCGT 62.079 66.667 0.00 0.00 37.74 5.28
194 195 3.766691 TCGTCGTGCTAAGGCCCC 61.767 66.667 0.00 0.00 37.74 5.80
195 196 2.502692 AAGTCGTCGTGCTAAGGCCC 62.503 60.000 0.00 0.00 37.74 5.80
196 197 1.077089 GAAGTCGTCGTGCTAAGGCC 61.077 60.000 0.00 0.00 37.74 5.19
197 198 1.077089 GGAAGTCGTCGTGCTAAGGC 61.077 60.000 0.00 0.00 39.26 4.35
198 199 0.242825 TGGAAGTCGTCGTGCTAAGG 59.757 55.000 0.00 0.00 0.00 2.69
199 200 1.199327 TCTGGAAGTCGTCGTGCTAAG 59.801 52.381 0.00 0.00 33.76 2.18
200 201 1.068748 GTCTGGAAGTCGTCGTGCTAA 60.069 52.381 0.00 0.00 33.76 3.09
201 202 0.520404 GTCTGGAAGTCGTCGTGCTA 59.480 55.000 0.00 0.00 33.76 3.49
202 203 1.173444 AGTCTGGAAGTCGTCGTGCT 61.173 55.000 0.00 0.00 33.76 4.40
203 204 1.004277 CAGTCTGGAAGTCGTCGTGC 61.004 60.000 0.00 0.00 33.76 5.34
204 205 0.311165 ACAGTCTGGAAGTCGTCGTG 59.689 55.000 4.53 0.00 33.76 4.35
205 206 0.592148 GACAGTCTGGAAGTCGTCGT 59.408 55.000 4.53 0.00 33.76 4.34
206 207 0.875728 AGACAGTCTGGAAGTCGTCG 59.124 55.000 0.91 0.00 37.36 5.12
207 208 2.162008 GGTAGACAGTCTGGAAGTCGTC 59.838 54.545 13.84 0.00 37.36 4.20
208 209 2.161030 GGTAGACAGTCTGGAAGTCGT 58.839 52.381 13.84 0.00 37.36 4.34
209 210 1.130749 CGGTAGACAGTCTGGAAGTCG 59.869 57.143 13.84 4.37 37.36 4.18
210 211 2.161030 ACGGTAGACAGTCTGGAAGTC 58.839 52.381 13.84 0.00 33.76 3.01
211 212 2.289592 ACGGTAGACAGTCTGGAAGT 57.710 50.000 13.84 5.30 33.76 3.01
212 213 3.504906 TGTTACGGTAGACAGTCTGGAAG 59.495 47.826 13.84 4.69 0.00 3.46
213 214 3.489355 TGTTACGGTAGACAGTCTGGAA 58.511 45.455 13.84 0.00 0.00 3.53
214 215 3.144657 TGTTACGGTAGACAGTCTGGA 57.855 47.619 13.84 0.00 0.00 3.86
215 216 3.367087 CCTTGTTACGGTAGACAGTCTGG 60.367 52.174 13.84 5.06 0.00 3.86
216 217 3.255149 ACCTTGTTACGGTAGACAGTCTG 59.745 47.826 13.84 0.00 31.69 3.51
217 218 3.494332 ACCTTGTTACGGTAGACAGTCT 58.506 45.455 8.50 8.50 31.69 3.24
218 219 3.930634 ACCTTGTTACGGTAGACAGTC 57.069 47.619 0.00 0.00 31.69 3.51
219 220 4.374399 CAAACCTTGTTACGGTAGACAGT 58.626 43.478 0.00 0.00 33.53 3.55
220 221 3.185797 GCAAACCTTGTTACGGTAGACAG 59.814 47.826 0.00 0.00 33.53 3.51
221 222 3.132925 GCAAACCTTGTTACGGTAGACA 58.867 45.455 0.00 0.00 33.53 3.41
222 223 3.396560 AGCAAACCTTGTTACGGTAGAC 58.603 45.455 0.00 0.00 33.53 2.59
223 224 3.656559 GAGCAAACCTTGTTACGGTAGA 58.343 45.455 0.00 0.00 33.53 2.59
224 225 2.410730 CGAGCAAACCTTGTTACGGTAG 59.589 50.000 0.00 0.00 33.53 3.18
225 226 2.406130 CGAGCAAACCTTGTTACGGTA 58.594 47.619 0.00 0.00 33.53 4.02
226 227 1.223187 CGAGCAAACCTTGTTACGGT 58.777 50.000 0.00 0.00 35.97 4.83
227 228 0.515564 CCGAGCAAACCTTGTTACGG 59.484 55.000 0.00 0.00 36.84 4.02
228 229 0.110373 GCCGAGCAAACCTTGTTACG 60.110 55.000 0.00 0.00 0.00 3.18
229 230 1.197036 GAGCCGAGCAAACCTTGTTAC 59.803 52.381 0.00 0.00 0.00 2.50
230 231 1.519408 GAGCCGAGCAAACCTTGTTA 58.481 50.000 0.00 0.00 0.00 2.41
231 232 1.172812 GGAGCCGAGCAAACCTTGTT 61.173 55.000 0.00 0.00 0.00 2.83
232 233 1.600916 GGAGCCGAGCAAACCTTGT 60.601 57.895 0.00 0.00 0.00 3.16
233 234 2.680913 CGGAGCCGAGCAAACCTTG 61.681 63.158 2.00 0.00 42.83 3.61
234 235 2.358737 CGGAGCCGAGCAAACCTT 60.359 61.111 2.00 0.00 42.83 3.50
235 236 4.394712 CCGGAGCCGAGCAAACCT 62.395 66.667 11.05 0.00 42.83 3.50
245 246 4.840005 CCTTCCTTCGCCGGAGCC 62.840 72.222 5.05 0.00 33.89 4.70
246 247 4.840005 CCCTTCCTTCGCCGGAGC 62.840 72.222 5.05 0.00 33.89 4.70
247 248 3.391382 ACCCTTCCTTCGCCGGAG 61.391 66.667 5.05 0.00 33.89 4.63
248 249 3.702048 CACCCTTCCTTCGCCGGA 61.702 66.667 5.05 0.00 0.00 5.14
249 250 3.031417 ATCACCCTTCCTTCGCCGG 62.031 63.158 0.00 0.00 0.00 6.13
250 251 1.815421 CATCACCCTTCCTTCGCCG 60.815 63.158 0.00 0.00 0.00 6.46
251 252 0.744771 GTCATCACCCTTCCTTCGCC 60.745 60.000 0.00 0.00 0.00 5.54
252 253 0.036388 TGTCATCACCCTTCCTTCGC 60.036 55.000 0.00 0.00 0.00 4.70
253 254 2.009042 GCTGTCATCACCCTTCCTTCG 61.009 57.143 0.00 0.00 0.00 3.79
254 255 1.743996 GCTGTCATCACCCTTCCTTC 58.256 55.000 0.00 0.00 0.00 3.46
255 256 0.036010 CGCTGTCATCACCCTTCCTT 60.036 55.000 0.00 0.00 0.00 3.36
256 257 1.599047 CGCTGTCATCACCCTTCCT 59.401 57.895 0.00 0.00 0.00 3.36
257 258 1.450312 CCGCTGTCATCACCCTTCC 60.450 63.158 0.00 0.00 0.00 3.46
258 259 2.109126 GCCGCTGTCATCACCCTTC 61.109 63.158 0.00 0.00 0.00 3.46
259 260 2.045926 GCCGCTGTCATCACCCTT 60.046 61.111 0.00 0.00 0.00 3.95
260 261 4.457496 CGCCGCTGTCATCACCCT 62.457 66.667 0.00 0.00 0.00 4.34
281 282 0.737715 AGCACTAAAGCGAGCCGAAG 60.738 55.000 0.00 0.00 40.15 3.79
282 283 0.320421 AAGCACTAAAGCGAGCCGAA 60.320 50.000 0.00 0.00 40.15 4.30
283 284 1.014044 CAAGCACTAAAGCGAGCCGA 61.014 55.000 0.00 0.00 40.15 5.54
284 285 1.291877 ACAAGCACTAAAGCGAGCCG 61.292 55.000 0.00 0.00 40.15 5.52
285 286 1.661112 CTACAAGCACTAAAGCGAGCC 59.339 52.381 0.00 0.00 40.15 4.70
286 287 2.338500 ACTACAAGCACTAAAGCGAGC 58.662 47.619 0.00 0.00 40.15 5.03
287 288 2.594654 CGACTACAAGCACTAAAGCGAG 59.405 50.000 0.00 0.00 40.15 5.03
288 289 2.030540 ACGACTACAAGCACTAAAGCGA 60.031 45.455 0.00 0.00 40.15 4.93
289 290 2.325761 ACGACTACAAGCACTAAAGCG 58.674 47.619 0.00 0.00 40.15 4.68
290 291 2.341760 CGACGACTACAAGCACTAAAGC 59.658 50.000 0.00 0.00 0.00 3.51
291 292 2.341760 GCGACGACTACAAGCACTAAAG 59.658 50.000 0.00 0.00 0.00 1.85
292 293 2.030540 AGCGACGACTACAAGCACTAAA 60.031 45.455 0.00 0.00 0.00 1.85
293 294 1.538512 AGCGACGACTACAAGCACTAA 59.461 47.619 0.00 0.00 0.00 2.24
294 295 1.162698 AGCGACGACTACAAGCACTA 58.837 50.000 0.00 0.00 0.00 2.74
295 296 1.130749 CTAGCGACGACTACAAGCACT 59.869 52.381 0.00 0.00 0.00 4.40
296 297 1.536149 CTAGCGACGACTACAAGCAC 58.464 55.000 0.00 0.00 0.00 4.40
297 298 0.450583 CCTAGCGACGACTACAAGCA 59.549 55.000 0.00 0.00 0.00 3.91
298 299 0.450983 ACCTAGCGACGACTACAAGC 59.549 55.000 0.00 0.00 0.00 4.01
299 300 1.202154 CCACCTAGCGACGACTACAAG 60.202 57.143 0.00 0.00 0.00 3.16
300 301 0.806868 CCACCTAGCGACGACTACAA 59.193 55.000 0.00 0.00 0.00 2.41
301 302 0.036105 TCCACCTAGCGACGACTACA 60.036 55.000 0.00 0.00 0.00 2.74
302 303 0.376502 GTCCACCTAGCGACGACTAC 59.623 60.000 0.00 0.00 0.00 2.73
303 304 0.251354 AGTCCACCTAGCGACGACTA 59.749 55.000 0.00 0.00 32.15 2.59
304 305 0.251354 TAGTCCACCTAGCGACGACT 59.749 55.000 0.00 0.00 37.54 4.18
305 306 1.002684 CATAGTCCACCTAGCGACGAC 60.003 57.143 0.00 0.00 34.10 4.34
306 307 1.306148 CATAGTCCACCTAGCGACGA 58.694 55.000 0.00 0.00 34.10 4.20
307 308 0.311165 CCATAGTCCACCTAGCGACG 59.689 60.000 0.00 0.00 34.10 5.12
308 309 1.688772 TCCATAGTCCACCTAGCGAC 58.311 55.000 0.00 0.00 0.00 5.19
309 310 2.108425 AGATCCATAGTCCACCTAGCGA 59.892 50.000 0.00 0.00 0.00 4.93
310 311 2.520069 AGATCCATAGTCCACCTAGCG 58.480 52.381 0.00 0.00 0.00 4.26
311 312 4.924625 TCTAGATCCATAGTCCACCTAGC 58.075 47.826 0.00 0.00 0.00 3.42
312 313 6.489603 ACATCTAGATCCATAGTCCACCTAG 58.510 44.000 1.03 0.00 0.00 3.02
313 314 6.470456 ACATCTAGATCCATAGTCCACCTA 57.530 41.667 1.03 0.00 0.00 3.08
314 315 5.346782 ACATCTAGATCCATAGTCCACCT 57.653 43.478 1.03 0.00 0.00 4.00
315 316 7.726033 ATTACATCTAGATCCATAGTCCACC 57.274 40.000 1.03 0.00 0.00 4.61
316 317 9.429359 CAAATTACATCTAGATCCATAGTCCAC 57.571 37.037 1.03 0.00 0.00 4.02
317 318 9.159254 ACAAATTACATCTAGATCCATAGTCCA 57.841 33.333 1.03 0.00 0.00 4.02
345 346 9.539825 TGGTAGTACAACGAACACTAAAAATAA 57.460 29.630 2.06 0.00 0.00 1.40
346 347 9.709495 ATGGTAGTACAACGAACACTAAAAATA 57.291 29.630 2.06 0.00 0.00 1.40
347 348 8.500773 CATGGTAGTACAACGAACACTAAAAAT 58.499 33.333 2.06 0.00 0.00 1.82
348 349 7.710044 TCATGGTAGTACAACGAACACTAAAAA 59.290 33.333 2.06 0.00 0.00 1.94
349 350 7.208777 TCATGGTAGTACAACGAACACTAAAA 58.791 34.615 2.06 0.00 0.00 1.52
350 351 6.747125 TCATGGTAGTACAACGAACACTAAA 58.253 36.000 2.06 0.00 0.00 1.85
351 352 6.330004 TCATGGTAGTACAACGAACACTAA 57.670 37.500 2.06 0.00 0.00 2.24
352 353 5.963176 TCATGGTAGTACAACGAACACTA 57.037 39.130 2.06 0.00 0.00 2.74
353 354 4.859304 TCATGGTAGTACAACGAACACT 57.141 40.909 2.06 0.00 0.00 3.55
354 355 4.264614 CGATCATGGTAGTACAACGAACAC 59.735 45.833 2.06 0.00 0.00 3.32
355 356 4.156373 TCGATCATGGTAGTACAACGAACA 59.844 41.667 2.06 0.00 0.00 3.18
356 357 4.665212 TCGATCATGGTAGTACAACGAAC 58.335 43.478 2.06 0.00 0.00 3.95
357 358 4.968812 TCGATCATGGTAGTACAACGAA 57.031 40.909 2.06 0.00 0.00 3.85
358 359 4.637091 TCTTCGATCATGGTAGTACAACGA 59.363 41.667 2.06 0.00 0.00 3.85
359 360 4.916870 TCTTCGATCATGGTAGTACAACG 58.083 43.478 2.06 0.00 0.00 4.10
360 361 6.504398 TCATCTTCGATCATGGTAGTACAAC 58.496 40.000 2.06 0.00 0.00 3.32
361 362 6.709018 TCATCTTCGATCATGGTAGTACAA 57.291 37.500 2.06 0.00 0.00 2.41
362 363 6.709018 TTCATCTTCGATCATGGTAGTACA 57.291 37.500 2.06 0.00 0.00 2.90
363 364 8.731605 TCTATTCATCTTCGATCATGGTAGTAC 58.268 37.037 0.00 0.00 0.00 2.73
364 365 8.863872 TCTATTCATCTTCGATCATGGTAGTA 57.136 34.615 0.00 0.00 0.00 1.82
365 366 7.767250 TCTATTCATCTTCGATCATGGTAGT 57.233 36.000 0.00 0.00 0.00 2.73
366 367 7.643371 CGATCTATTCATCTTCGATCATGGTAG 59.357 40.741 0.00 7.32 32.16 3.18
367 368 7.415653 CCGATCTATTCATCTTCGATCATGGTA 60.416 40.741 0.00 0.00 32.16 3.25
368 369 6.328714 CGATCTATTCATCTTCGATCATGGT 58.671 40.000 0.00 0.00 32.16 3.55
369 370 5.747675 CCGATCTATTCATCTTCGATCATGG 59.252 44.000 0.00 0.00 32.16 3.66
370 371 6.558909 TCCGATCTATTCATCTTCGATCATG 58.441 40.000 0.00 0.00 32.16 3.07
371 372 6.765915 TCCGATCTATTCATCTTCGATCAT 57.234 37.500 0.00 0.00 32.16 2.45
372 373 6.207614 ACTTCCGATCTATTCATCTTCGATCA 59.792 38.462 0.00 0.00 32.16 2.92
373 374 6.616947 ACTTCCGATCTATTCATCTTCGATC 58.383 40.000 0.00 0.00 31.74 3.69
374 375 6.582677 ACTTCCGATCTATTCATCTTCGAT 57.417 37.500 0.00 0.00 31.74 3.59
375 376 6.392625 AACTTCCGATCTATTCATCTTCGA 57.607 37.500 0.00 0.00 31.74 3.71
376 377 8.749841 ATAAACTTCCGATCTATTCATCTTCG 57.250 34.615 0.00 0.00 0.00 3.79
377 378 9.145865 GGATAAACTTCCGATCTATTCATCTTC 57.854 37.037 0.00 0.00 0.00 2.87
378 379 8.097662 GGGATAAACTTCCGATCTATTCATCTT 58.902 37.037 0.00 0.00 36.58 2.40
379 380 7.577807 CGGGATAAACTTCCGATCTATTCATCT 60.578 40.741 0.00 0.00 45.96 2.90
380 381 6.531948 CGGGATAAACTTCCGATCTATTCATC 59.468 42.308 0.00 0.00 45.96 2.92
381 382 6.398918 CGGGATAAACTTCCGATCTATTCAT 58.601 40.000 0.00 0.00 45.96 2.57
382 383 5.779922 CGGGATAAACTTCCGATCTATTCA 58.220 41.667 0.00 0.00 45.96 2.57
383 384 4.626172 GCGGGATAAACTTCCGATCTATTC 59.374 45.833 5.11 0.00 45.96 1.75
384 385 4.039973 TGCGGGATAAACTTCCGATCTATT 59.960 41.667 5.11 0.00 45.96 1.73
385 386 3.576982 TGCGGGATAAACTTCCGATCTAT 59.423 43.478 5.11 0.00 45.96 1.98
386 387 2.960384 TGCGGGATAAACTTCCGATCTA 59.040 45.455 5.11 0.00 45.96 1.98
387 388 1.760613 TGCGGGATAAACTTCCGATCT 59.239 47.619 5.11 0.00 45.96 2.75
388 389 2.234300 TGCGGGATAAACTTCCGATC 57.766 50.000 5.11 0.00 45.96 3.69
389 390 2.702592 TTGCGGGATAAACTTCCGAT 57.297 45.000 5.11 0.00 45.96 4.18
390 391 2.476126 TTTGCGGGATAAACTTCCGA 57.524 45.000 5.11 0.00 45.96 4.55
391 392 3.562567 TTTTTGCGGGATAAACTTCCG 57.437 42.857 0.00 0.00 45.84 4.30
410 411 9.104965 GCAAAAGTGATAGTTTTAACCCTTTTT 57.895 29.630 0.00 0.00 30.20 1.94
411 412 8.261522 TGCAAAAGTGATAGTTTTAACCCTTTT 58.738 29.630 0.00 0.00 30.20 2.27
412 413 7.787028 TGCAAAAGTGATAGTTTTAACCCTTT 58.213 30.769 0.00 0.00 30.20 3.11
413 414 7.354751 TGCAAAAGTGATAGTTTTAACCCTT 57.645 32.000 0.00 0.00 30.20 3.95
414 415 6.015434 CCTGCAAAAGTGATAGTTTTAACCCT 60.015 38.462 0.00 0.00 30.20 4.34
415 416 6.015772 TCCTGCAAAAGTGATAGTTTTAACCC 60.016 38.462 0.00 0.00 30.20 4.11
416 417 6.977213 TCCTGCAAAAGTGATAGTTTTAACC 58.023 36.000 0.00 0.00 30.20 2.85
417 418 8.752254 GTTTCCTGCAAAAGTGATAGTTTTAAC 58.248 33.333 0.00 0.00 30.20 2.01
418 419 7.923878 GGTTTCCTGCAAAAGTGATAGTTTTAA 59.076 33.333 0.00 0.00 30.20 1.52
419 420 7.430441 GGTTTCCTGCAAAAGTGATAGTTTTA 58.570 34.615 0.00 0.00 30.20 1.52
420 421 6.280643 GGTTTCCTGCAAAAGTGATAGTTTT 58.719 36.000 0.00 0.00 31.34 2.43
434 435 1.502527 AATACCGGGGGTTTCCTGCA 61.503 55.000 6.32 0.00 40.67 4.41
435 436 0.323999 AAATACCGGGGGTTTCCTGC 60.324 55.000 6.32 0.00 40.67 4.85
436 437 1.822371 CAAAATACCGGGGGTTTCCTG 59.178 52.381 6.32 0.00 41.69 3.86
437 438 1.272816 CCAAAATACCGGGGGTTTCCT 60.273 52.381 6.32 0.00 37.09 3.36
439 440 1.927487 ACCAAAATACCGGGGGTTTC 58.073 50.000 6.32 0.00 37.09 2.78
440 441 3.634504 GATACCAAAATACCGGGGGTTT 58.365 45.455 6.32 0.16 37.09 3.27
443 444 1.886886 CGATACCAAAATACCGGGGG 58.113 55.000 6.32 0.00 0.00 5.40
461 462 1.270625 ACCCACAATACATATCCCGCG 60.271 52.381 0.00 0.00 0.00 6.46
511 512 0.033208 TCATGCTAAGGCCCCAAAGG 60.033 55.000 0.00 0.00 37.74 3.11
512 513 1.684983 CATCATGCTAAGGCCCCAAAG 59.315 52.381 0.00 0.00 37.74 2.77
515 516 0.183492 GTCATCATGCTAAGGCCCCA 59.817 55.000 0.00 0.00 37.74 4.96
528 529 1.924731 AGACAGTCGGGAAGTCATCA 58.075 50.000 0.00 0.00 34.80 3.07
534 535 3.945921 TGATGTAGTAGACAGTCGGGAAG 59.054 47.826 0.00 0.00 42.79 3.46
544 545 5.448632 CCCCGCAAATTTTGATGTAGTAGAC 60.449 44.000 13.26 0.00 0.00 2.59
548 549 2.094234 GCCCCGCAAATTTTGATGTAGT 60.094 45.455 13.26 0.00 0.00 2.73
552 553 1.643880 GAGCCCCGCAAATTTTGATG 58.356 50.000 13.26 4.35 0.00 3.07
554 555 1.971418 GGAGCCCCGCAAATTTTGA 59.029 52.632 13.26 0.00 0.00 2.69
574 575 1.422531 CATCTTCTCCCCTCCCTCAG 58.577 60.000 0.00 0.00 0.00 3.35
606 607 0.679505 ACAAACACTAGAGCGAGCCA 59.320 50.000 0.00 0.00 0.00 4.75
621 622 3.084039 ACCACCTATCGACGACTACAAA 58.916 45.455 0.00 0.00 0.00 2.83
652 653 8.943594 AGTGGTAATAAAAATTACAACCAGGA 57.056 30.769 10.71 0.00 40.25 3.86
675 676 4.960938 TCAGCAATACAGAGAACACAAGT 58.039 39.130 0.00 0.00 0.00 3.16
756 759 4.127566 GCAATACCCTTGCATGTTCATT 57.872 40.909 5.13 0.00 44.34 2.57
825 832 5.181811 CGGCAATATTTTAGCATGATCAGGA 59.818 40.000 12.39 0.00 0.00 3.86
978 3680 0.250901 GGGGATATTGGATGCGTGCT 60.251 55.000 0.00 0.00 0.00 4.40
990 3697 6.214819 AGTGTTGTATTTATAGCCGGGGATAT 59.785 38.462 2.18 0.68 0.00 1.63
991 3698 5.544948 AGTGTTGTATTTATAGCCGGGGATA 59.455 40.000 2.18 0.00 0.00 2.59
992 3699 4.349930 AGTGTTGTATTTATAGCCGGGGAT 59.650 41.667 2.18 0.00 0.00 3.85
993 3700 3.712733 AGTGTTGTATTTATAGCCGGGGA 59.287 43.478 2.18 0.00 0.00 4.81
1035 3744 3.414700 GCGTGTGCTTGAGTCGGG 61.415 66.667 0.00 0.00 38.39 5.14
1070 3812 0.322975 AGAGCAACGAAGATGGCAGT 59.677 50.000 0.00 0.00 0.00 4.40
1087 3829 0.395036 CGGAGAGGAGAAGGCTCAGA 60.395 60.000 0.00 0.00 43.14 3.27
1215 3961 1.753078 TCGATAGAGCACTGCCCGT 60.753 57.895 0.00 0.00 42.67 5.28
1280 4026 1.371558 GAACACCGACCTTGAGGCT 59.628 57.895 0.00 0.00 39.32 4.58
1320 4066 2.417558 GACCAACCCCTGAAGCAGCT 62.418 60.000 0.00 0.00 0.00 4.24
1327 4073 1.460689 AAGGTCGACCAACCCCTGA 60.461 57.895 35.00 0.00 40.42 3.86
1423 4169 1.376553 GCAGTGGTTGAGGAGGAGC 60.377 63.158 0.00 0.00 0.00 4.70
1602 5563 5.693814 ACGAAAAGAGTAGTACTGGTTACG 58.306 41.667 7.76 10.22 35.61 3.18
1697 5658 5.574188 AGGAGACAGCCAGACAAAAATTAT 58.426 37.500 0.00 0.00 0.00 1.28
1702 5663 1.072331 GGAGGAGACAGCCAGACAAAA 59.928 52.381 0.00 0.00 0.00 2.44
1807 5768 2.671070 CAGGATCCACCACGCCTT 59.329 61.111 15.82 0.00 42.04 4.35
1870 5831 1.053424 AGGACACGAACCCTAGCAAA 58.947 50.000 0.00 0.00 0.00 3.68
1911 5872 1.358152 TTTCATCTTCAGGGACCCGT 58.642 50.000 4.40 0.00 0.00 5.28
2006 5968 7.800092 AGCAAATCTACCAAAGATAGATCTGT 58.200 34.615 5.18 0.00 44.56 3.41
2023 5985 1.268794 CGACGAGATCCGAGCAAATCT 60.269 52.381 10.05 0.00 41.76 2.40
2046 6008 2.097733 GGACACACGAACGTAAACGAAG 60.098 50.000 9.86 2.68 43.02 3.79
2111 6073 3.527665 ACCATTACCCCAGAATAGCAACT 59.472 43.478 0.00 0.00 0.00 3.16
2154 6116 6.722590 TGTTGTAGTAGATAGTTGGGAAGTCA 59.277 38.462 0.00 0.00 0.00 3.41
2198 6160 2.796193 CCGACATCGCCCTCCATCA 61.796 63.158 0.00 0.00 38.18 3.07
2238 6201 3.119602 CCTAGCAACGACTACAAGCACTA 60.120 47.826 0.00 0.00 0.00 2.74
2412 6375 7.303261 CGTCTAGATCAGTACTTGTGTGTTTA 58.697 38.462 0.00 0.00 0.00 2.01
2473 6438 1.065102 GCGTGAGGCGTCATAGTTCTA 59.935 52.381 12.93 0.00 43.66 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.