Multiple sequence alignment - TraesCS4B01G312400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G312400 | chr4B | 100.000 | 2741 | 0 | 0 | 1 | 2741 | 602040362 | 602037622 | 0.000000e+00 | 5062 |
1 | TraesCS4B01G312400 | chr4B | 85.333 | 450 | 50 | 14 | 1290 | 1734 | 44118920 | 44119358 | 4.160000e-123 | 451 |
2 | TraesCS4B01G312400 | chr4A | 91.936 | 1637 | 75 | 19 | 358 | 1948 | 684176917 | 684175292 | 0.000000e+00 | 2239 |
3 | TraesCS4B01G312400 | chr4A | 88.140 | 801 | 73 | 15 | 1951 | 2740 | 728595188 | 728594399 | 0.000000e+00 | 933 |
4 | TraesCS4B01G312400 | chr4A | 93.036 | 359 | 22 | 3 | 1 | 357 | 731976154 | 731976511 | 3.130000e-144 | 521 |
5 | TraesCS4B01G312400 | chr4A | 82.609 | 552 | 55 | 24 | 1291 | 1821 | 571971958 | 571972489 | 1.500000e-122 | 449 |
6 | TraesCS4B01G312400 | chr4D | 92.091 | 1454 | 60 | 18 | 517 | 1950 | 477364109 | 477362691 | 0.000000e+00 | 1997 |
7 | TraesCS4B01G312400 | chr4D | 84.934 | 458 | 40 | 16 | 1290 | 1734 | 30755407 | 30755848 | 1.170000e-118 | 436 |
8 | TraesCS4B01G312400 | chr7A | 94.058 | 791 | 46 | 1 | 1950 | 2740 | 681260659 | 681259870 | 0.000000e+00 | 1199 |
9 | TraesCS4B01G312400 | chr7A | 93.056 | 360 | 21 | 4 | 1 | 357 | 2839516 | 2839874 | 8.700000e-145 | 523 |
10 | TraesCS4B01G312400 | chr3D | 94.473 | 778 | 41 | 1 | 1958 | 2735 | 599390809 | 599391584 | 0.000000e+00 | 1197 |
11 | TraesCS4B01G312400 | chr6A | 91.646 | 790 | 63 | 3 | 1951 | 2740 | 32937113 | 32936327 | 0.000000e+00 | 1090 |
12 | TraesCS4B01G312400 | chr6A | 93.593 | 359 | 21 | 2 | 1 | 357 | 8336621 | 8336263 | 4.020000e-148 | 534 |
13 | TraesCS4B01G312400 | chr3B | 90.759 | 790 | 71 | 2 | 1951 | 2740 | 47607418 | 47606631 | 0.000000e+00 | 1053 |
14 | TraesCS4B01G312400 | chr3B | 90.114 | 789 | 76 | 2 | 1952 | 2740 | 49149487 | 49150273 | 0.000000e+00 | 1024 |
15 | TraesCS4B01G312400 | chr3B | 94.183 | 361 | 19 | 2 | 1 | 359 | 344180602 | 344180962 | 1.430000e-152 | 549 |
16 | TraesCS4B01G312400 | chr3B | 92.778 | 360 | 22 | 4 | 1 | 357 | 786046988 | 786047346 | 4.050000e-143 | 518 |
17 | TraesCS4B01G312400 | chr1B | 89.175 | 776 | 82 | 2 | 1960 | 2735 | 48930489 | 48929716 | 0.000000e+00 | 966 |
18 | TraesCS4B01G312400 | chr1B | 92.521 | 361 | 23 | 4 | 1 | 358 | 18857701 | 18857342 | 5.230000e-142 | 514 |
19 | TraesCS4B01G312400 | chr5D | 88.529 | 802 | 69 | 12 | 1951 | 2740 | 9585802 | 9585012 | 0.000000e+00 | 950 |
20 | TraesCS4B01G312400 | chr5D | 86.011 | 529 | 53 | 14 | 1234 | 1756 | 409007891 | 409007378 | 5.160000e-152 | 547 |
21 | TraesCS4B01G312400 | chr5D | 85.038 | 528 | 61 | 10 | 1235 | 1759 | 409357981 | 409357469 | 3.130000e-144 | 521 |
22 | TraesCS4B01G312400 | chr5A | 87.750 | 800 | 78 | 13 | 1951 | 2740 | 622410441 | 622411230 | 0.000000e+00 | 917 |
23 | TraesCS4B01G312400 | chr5A | 84.280 | 528 | 65 | 10 | 1235 | 1759 | 520532106 | 520531594 | 1.470000e-137 | 499 |
24 | TraesCS4B01G312400 | chr2B | 86.918 | 795 | 84 | 5 | 1951 | 2735 | 175938890 | 175939674 | 0.000000e+00 | 874 |
25 | TraesCS4B01G312400 | chr2B | 93.056 | 360 | 21 | 4 | 1 | 357 | 260644465 | 260644107 | 8.700000e-145 | 523 |
26 | TraesCS4B01G312400 | chr5B | 91.152 | 486 | 24 | 2 | 2255 | 2740 | 682202140 | 682201674 | 2.300000e-180 | 641 |
27 | TraesCS4B01G312400 | chr5B | 85.795 | 528 | 57 | 12 | 1235 | 1759 | 491173686 | 491173174 | 6.680000e-151 | 544 |
28 | TraesCS4B01G312400 | chr5B | 95.195 | 333 | 16 | 0 | 1951 | 2283 | 682202486 | 682202154 | 6.720000e-146 | 527 |
29 | TraesCS4B01G312400 | chr7B | 93.277 | 357 | 20 | 4 | 3 | 357 | 36666054 | 36665700 | 8.700000e-145 | 523 |
30 | TraesCS4B01G312400 | chr6B | 93.036 | 359 | 21 | 4 | 1 | 356 | 65760634 | 65760991 | 3.130000e-144 | 521 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G312400 | chr4B | 602037622 | 602040362 | 2740 | True | 5062 | 5062 | 100.0000 | 1 | 2741 | 1 | chr4B.!!$R1 | 2740 |
1 | TraesCS4B01G312400 | chr4A | 684175292 | 684176917 | 1625 | True | 2239 | 2239 | 91.9360 | 358 | 1948 | 1 | chr4A.!!$R1 | 1590 |
2 | TraesCS4B01G312400 | chr4A | 728594399 | 728595188 | 789 | True | 933 | 933 | 88.1400 | 1951 | 2740 | 1 | chr4A.!!$R2 | 789 |
3 | TraesCS4B01G312400 | chr4A | 571971958 | 571972489 | 531 | False | 449 | 449 | 82.6090 | 1291 | 1821 | 1 | chr4A.!!$F1 | 530 |
4 | TraesCS4B01G312400 | chr4D | 477362691 | 477364109 | 1418 | True | 1997 | 1997 | 92.0910 | 517 | 1950 | 1 | chr4D.!!$R1 | 1433 |
5 | TraesCS4B01G312400 | chr7A | 681259870 | 681260659 | 789 | True | 1199 | 1199 | 94.0580 | 1950 | 2740 | 1 | chr7A.!!$R1 | 790 |
6 | TraesCS4B01G312400 | chr3D | 599390809 | 599391584 | 775 | False | 1197 | 1197 | 94.4730 | 1958 | 2735 | 1 | chr3D.!!$F1 | 777 |
7 | TraesCS4B01G312400 | chr6A | 32936327 | 32937113 | 786 | True | 1090 | 1090 | 91.6460 | 1951 | 2740 | 1 | chr6A.!!$R2 | 789 |
8 | TraesCS4B01G312400 | chr3B | 47606631 | 47607418 | 787 | True | 1053 | 1053 | 90.7590 | 1951 | 2740 | 1 | chr3B.!!$R1 | 789 |
9 | TraesCS4B01G312400 | chr3B | 49149487 | 49150273 | 786 | False | 1024 | 1024 | 90.1140 | 1952 | 2740 | 1 | chr3B.!!$F1 | 788 |
10 | TraesCS4B01G312400 | chr1B | 48929716 | 48930489 | 773 | True | 966 | 966 | 89.1750 | 1960 | 2735 | 1 | chr1B.!!$R2 | 775 |
11 | TraesCS4B01G312400 | chr5D | 9585012 | 9585802 | 790 | True | 950 | 950 | 88.5290 | 1951 | 2740 | 1 | chr5D.!!$R1 | 789 |
12 | TraesCS4B01G312400 | chr5D | 409007378 | 409007891 | 513 | True | 547 | 547 | 86.0110 | 1234 | 1756 | 1 | chr5D.!!$R2 | 522 |
13 | TraesCS4B01G312400 | chr5D | 409357469 | 409357981 | 512 | True | 521 | 521 | 85.0380 | 1235 | 1759 | 1 | chr5D.!!$R3 | 524 |
14 | TraesCS4B01G312400 | chr5A | 622410441 | 622411230 | 789 | False | 917 | 917 | 87.7500 | 1951 | 2740 | 1 | chr5A.!!$F1 | 789 |
15 | TraesCS4B01G312400 | chr5A | 520531594 | 520532106 | 512 | True | 499 | 499 | 84.2800 | 1235 | 1759 | 1 | chr5A.!!$R1 | 524 |
16 | TraesCS4B01G312400 | chr2B | 175938890 | 175939674 | 784 | False | 874 | 874 | 86.9180 | 1951 | 2735 | 1 | chr2B.!!$F1 | 784 |
17 | TraesCS4B01G312400 | chr5B | 682201674 | 682202486 | 812 | True | 584 | 641 | 93.1735 | 1951 | 2740 | 2 | chr5B.!!$R2 | 789 |
18 | TraesCS4B01G312400 | chr5B | 491173174 | 491173686 | 512 | True | 544 | 544 | 85.7950 | 1235 | 1759 | 1 | chr5B.!!$R1 | 524 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
549 | 553 | 0.03254 | CCATCGCTCGACCATCATCA | 59.967 | 55.0 | 0.0 | 0.0 | 0.0 | 3.07 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2355 | 2479 | 1.002257 | CCACACCTGCCATACTGCA | 60.002 | 57.895 | 0.0 | 0.0 | 39.37 | 4.41 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
29 | 30 | 2.939460 | AAACTCAAGTTTGCGCTTGT | 57.061 | 40.000 | 9.73 | 0.00 | 45.55 | 3.16 |
30 | 31 | 2.939460 | AACTCAAGTTTGCGCTTGTT | 57.061 | 40.000 | 9.73 | 0.00 | 44.41 | 2.83 |
31 | 32 | 4.364415 | AAACTCAAGTTTGCGCTTGTTA | 57.636 | 36.364 | 9.73 | 0.00 | 45.55 | 2.41 |
32 | 33 | 4.568152 | AACTCAAGTTTGCGCTTGTTAT | 57.432 | 36.364 | 9.73 | 0.00 | 44.41 | 1.89 |
33 | 34 | 5.682943 | AACTCAAGTTTGCGCTTGTTATA | 57.317 | 34.783 | 9.73 | 0.00 | 44.41 | 0.98 |
34 | 35 | 5.880054 | ACTCAAGTTTGCGCTTGTTATAT | 57.120 | 34.783 | 9.73 | 0.00 | 44.41 | 0.86 |
35 | 36 | 5.631026 | ACTCAAGTTTGCGCTTGTTATATG | 58.369 | 37.500 | 9.73 | 0.00 | 44.41 | 1.78 |
36 | 37 | 4.980590 | TCAAGTTTGCGCTTGTTATATGG | 58.019 | 39.130 | 9.73 | 0.00 | 44.41 | 2.74 |
37 | 38 | 4.697828 | TCAAGTTTGCGCTTGTTATATGGA | 59.302 | 37.500 | 9.73 | 0.00 | 44.41 | 3.41 |
38 | 39 | 4.616181 | AGTTTGCGCTTGTTATATGGAC | 57.384 | 40.909 | 9.73 | 0.00 | 0.00 | 4.02 |
39 | 40 | 3.063452 | AGTTTGCGCTTGTTATATGGACG | 59.937 | 43.478 | 9.73 | 0.00 | 0.00 | 4.79 |
40 | 41 | 1.577468 | TGCGCTTGTTATATGGACGG | 58.423 | 50.000 | 9.73 | 0.00 | 0.00 | 4.79 |
41 | 42 | 1.137282 | TGCGCTTGTTATATGGACGGA | 59.863 | 47.619 | 9.73 | 0.00 | 0.00 | 4.69 |
42 | 43 | 1.792949 | GCGCTTGTTATATGGACGGAG | 59.207 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
43 | 44 | 2.545113 | GCGCTTGTTATATGGACGGAGA | 60.545 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
44 | 45 | 3.861131 | GCGCTTGTTATATGGACGGAGAT | 60.861 | 47.826 | 0.00 | 0.00 | 0.00 | 2.75 |
45 | 46 | 3.675225 | CGCTTGTTATATGGACGGAGATG | 59.325 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
46 | 47 | 3.433615 | GCTTGTTATATGGACGGAGATGC | 59.566 | 47.826 | 0.00 | 0.00 | 0.00 | 3.91 |
47 | 48 | 3.297830 | TGTTATATGGACGGAGATGCG | 57.702 | 47.619 | 0.00 | 0.00 | 0.00 | 4.73 |
48 | 49 | 2.029380 | TGTTATATGGACGGAGATGCGG | 60.029 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
49 | 50 | 0.530744 | TATATGGACGGAGATGCGGC | 59.469 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 |
50 | 51 | 2.172483 | ATATGGACGGAGATGCGGCC | 62.172 | 60.000 | 12.22 | 12.22 | 0.00 | 6.13 |
52 | 53 | 4.467084 | GGACGGAGATGCGGCCAA | 62.467 | 66.667 | 14.33 | 0.00 | 0.00 | 4.52 |
53 | 54 | 3.195698 | GACGGAGATGCGGCCAAC | 61.196 | 66.667 | 2.24 | 0.00 | 0.00 | 3.77 |
54 | 55 | 3.950794 | GACGGAGATGCGGCCAACA | 62.951 | 63.158 | 2.24 | 0.00 | 0.00 | 3.33 |
55 | 56 | 2.745884 | CGGAGATGCGGCCAACAA | 60.746 | 61.111 | 2.24 | 0.00 | 0.00 | 2.83 |
56 | 57 | 2.753966 | CGGAGATGCGGCCAACAAG | 61.754 | 63.158 | 2.24 | 0.00 | 0.00 | 3.16 |
57 | 58 | 2.486966 | GAGATGCGGCCAACAAGC | 59.513 | 61.111 | 2.24 | 0.00 | 0.00 | 4.01 |
58 | 59 | 3.386867 | GAGATGCGGCCAACAAGCG | 62.387 | 63.158 | 2.24 | 0.00 | 0.00 | 4.68 |
65 | 66 | 3.910490 | GCCAACAAGCGCACCCAA | 61.910 | 61.111 | 11.47 | 0.00 | 0.00 | 4.12 |
66 | 67 | 2.811101 | CCAACAAGCGCACCCAAA | 59.189 | 55.556 | 11.47 | 0.00 | 0.00 | 3.28 |
67 | 68 | 1.142748 | CCAACAAGCGCACCCAAAA | 59.857 | 52.632 | 11.47 | 0.00 | 0.00 | 2.44 |
68 | 69 | 0.460987 | CCAACAAGCGCACCCAAAAA | 60.461 | 50.000 | 11.47 | 0.00 | 0.00 | 1.94 |
69 | 70 | 0.649993 | CAACAAGCGCACCCAAAAAC | 59.350 | 50.000 | 11.47 | 0.00 | 0.00 | 2.43 |
70 | 71 | 0.461163 | AACAAGCGCACCCAAAAACC | 60.461 | 50.000 | 11.47 | 0.00 | 0.00 | 3.27 |
71 | 72 | 1.326951 | ACAAGCGCACCCAAAAACCT | 61.327 | 50.000 | 11.47 | 0.00 | 0.00 | 3.50 |
72 | 73 | 0.179086 | CAAGCGCACCCAAAAACCTT | 60.179 | 50.000 | 11.47 | 0.00 | 0.00 | 3.50 |
73 | 74 | 0.179086 | AAGCGCACCCAAAAACCTTG | 60.179 | 50.000 | 11.47 | 0.00 | 0.00 | 3.61 |
74 | 75 | 1.040339 | AGCGCACCCAAAAACCTTGA | 61.040 | 50.000 | 11.47 | 0.00 | 0.00 | 3.02 |
75 | 76 | 0.179097 | GCGCACCCAAAAACCTTGAA | 60.179 | 50.000 | 0.30 | 0.00 | 0.00 | 2.69 |
76 | 77 | 1.740718 | GCGCACCCAAAAACCTTGAAA | 60.741 | 47.619 | 0.30 | 0.00 | 0.00 | 2.69 |
77 | 78 | 2.622436 | CGCACCCAAAAACCTTGAAAA | 58.378 | 42.857 | 0.00 | 0.00 | 0.00 | 2.29 |
78 | 79 | 3.202097 | CGCACCCAAAAACCTTGAAAAT | 58.798 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
79 | 80 | 3.002144 | CGCACCCAAAAACCTTGAAAATG | 59.998 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
80 | 81 | 3.944650 | GCACCCAAAAACCTTGAAAATGT | 59.055 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
81 | 82 | 5.119694 | GCACCCAAAAACCTTGAAAATGTA | 58.880 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
82 | 83 | 5.762711 | GCACCCAAAAACCTTGAAAATGTAT | 59.237 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
83 | 84 | 6.931840 | GCACCCAAAAACCTTGAAAATGTATA | 59.068 | 34.615 | 0.00 | 0.00 | 0.00 | 1.47 |
84 | 85 | 7.442666 | GCACCCAAAAACCTTGAAAATGTATAA | 59.557 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
85 | 86 | 9.500785 | CACCCAAAAACCTTGAAAATGTATAAT | 57.499 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
86 | 87 | 9.719355 | ACCCAAAAACCTTGAAAATGTATAATC | 57.281 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
87 | 88 | 9.717942 | CCCAAAAACCTTGAAAATGTATAATCA | 57.282 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
92 | 93 | 9.927668 | AAACCTTGAAAATGTATAATCAGGTTG | 57.072 | 29.630 | 0.00 | 0.00 | 35.47 | 3.77 |
93 | 94 | 8.650143 | ACCTTGAAAATGTATAATCAGGTTGT | 57.350 | 30.769 | 0.00 | 0.00 | 0.00 | 3.32 |
94 | 95 | 9.088987 | ACCTTGAAAATGTATAATCAGGTTGTT | 57.911 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
95 | 96 | 9.573133 | CCTTGAAAATGTATAATCAGGTTGTTC | 57.427 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
104 | 105 | 9.613428 | TGTATAATCAGGTTGTTCATTAAGGAG | 57.387 | 33.333 | 0.00 | 0.00 | 0.00 | 3.69 |
105 | 106 | 9.832445 | GTATAATCAGGTTGTTCATTAAGGAGA | 57.168 | 33.333 | 0.00 | 0.00 | 0.00 | 3.71 |
107 | 108 | 7.454260 | AATCAGGTTGTTCATTAAGGAGAAC | 57.546 | 36.000 | 9.89 | 9.89 | 43.31 | 3.01 |
108 | 109 | 5.313712 | TCAGGTTGTTCATTAAGGAGAACC | 58.686 | 41.667 | 18.50 | 18.50 | 42.57 | 3.62 |
113 | 114 | 6.434340 | GGTTGTTCATTAAGGAGAACCTGAAT | 59.566 | 38.462 | 18.73 | 0.00 | 45.61 | 2.57 |
119 | 120 | 2.350863 | AGGAGAACCTGAATGGGAGT | 57.649 | 50.000 | 0.00 | 0.00 | 45.92 | 3.85 |
120 | 121 | 2.192263 | AGGAGAACCTGAATGGGAGTC | 58.808 | 52.381 | 0.00 | 0.00 | 45.92 | 3.36 |
121 | 122 | 2.192263 | GGAGAACCTGAATGGGAGTCT | 58.808 | 52.381 | 0.00 | 0.00 | 41.11 | 3.24 |
122 | 123 | 2.573915 | GGAGAACCTGAATGGGAGTCTT | 59.426 | 50.000 | 0.00 | 0.00 | 41.11 | 3.01 |
123 | 124 | 3.369997 | GGAGAACCTGAATGGGAGTCTTC | 60.370 | 52.174 | 0.00 | 0.00 | 41.11 | 2.87 |
124 | 125 | 3.251484 | AGAACCTGAATGGGAGTCTTCA | 58.749 | 45.455 | 0.00 | 0.00 | 41.11 | 3.02 |
125 | 126 | 3.848975 | AGAACCTGAATGGGAGTCTTCAT | 59.151 | 43.478 | 0.00 | 0.00 | 41.11 | 2.57 |
126 | 127 | 3.641434 | ACCTGAATGGGAGTCTTCATG | 57.359 | 47.619 | 0.00 | 0.00 | 41.11 | 3.07 |
127 | 128 | 2.915604 | ACCTGAATGGGAGTCTTCATGT | 59.084 | 45.455 | 0.00 | 0.00 | 41.11 | 3.21 |
128 | 129 | 3.331889 | ACCTGAATGGGAGTCTTCATGTT | 59.668 | 43.478 | 0.00 | 0.00 | 41.11 | 2.71 |
129 | 130 | 3.944015 | CCTGAATGGGAGTCTTCATGTTC | 59.056 | 47.826 | 0.00 | 0.00 | 31.39 | 3.18 |
130 | 131 | 4.566278 | CCTGAATGGGAGTCTTCATGTTCA | 60.566 | 45.833 | 0.00 | 0.00 | 31.39 | 3.18 |
131 | 132 | 4.984295 | TGAATGGGAGTCTTCATGTTCAA | 58.016 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
132 | 133 | 5.005740 | TGAATGGGAGTCTTCATGTTCAAG | 58.994 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
133 | 134 | 4.916041 | ATGGGAGTCTTCATGTTCAAGA | 57.084 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
134 | 135 | 4.008074 | TGGGAGTCTTCATGTTCAAGAC | 57.992 | 45.455 | 14.81 | 14.81 | 46.99 | 3.01 |
139 | 140 | 4.637574 | GTCTTCATGTTCAAGACACGAG | 57.362 | 45.455 | 16.80 | 0.00 | 46.22 | 4.18 |
140 | 141 | 3.430218 | GTCTTCATGTTCAAGACACGAGG | 59.570 | 47.826 | 16.80 | 0.00 | 46.22 | 4.63 |
141 | 142 | 2.455674 | TCATGTTCAAGACACGAGGG | 57.544 | 50.000 | 0.00 | 0.00 | 42.04 | 4.30 |
142 | 143 | 1.001974 | TCATGTTCAAGACACGAGGGG | 59.998 | 52.381 | 0.00 | 0.00 | 42.04 | 4.79 |
143 | 144 | 1.056660 | ATGTTCAAGACACGAGGGGT | 58.943 | 50.000 | 0.00 | 0.00 | 42.04 | 4.95 |
151 | 152 | 4.619227 | CACGAGGGGTGTGCGGTT | 62.619 | 66.667 | 0.00 | 0.00 | 41.89 | 4.44 |
152 | 153 | 3.868985 | ACGAGGGGTGTGCGGTTT | 61.869 | 61.111 | 0.00 | 0.00 | 0.00 | 3.27 |
153 | 154 | 2.344500 | CGAGGGGTGTGCGGTTTA | 59.656 | 61.111 | 0.00 | 0.00 | 0.00 | 2.01 |
154 | 155 | 1.078708 | CGAGGGGTGTGCGGTTTAT | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 1.40 |
155 | 156 | 1.366111 | CGAGGGGTGTGCGGTTTATG | 61.366 | 60.000 | 0.00 | 0.00 | 0.00 | 1.90 |
156 | 157 | 0.035820 | GAGGGGTGTGCGGTTTATGA | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 2.15 |
157 | 158 | 0.035439 | AGGGGTGTGCGGTTTATGAG | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
158 | 159 | 0.035820 | GGGGTGTGCGGTTTATGAGA | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
159 | 160 | 1.612199 | GGGGTGTGCGGTTTATGAGAA | 60.612 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
160 | 161 | 2.156098 | GGGTGTGCGGTTTATGAGAAA | 58.844 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
161 | 162 | 2.554893 | GGGTGTGCGGTTTATGAGAAAA | 59.445 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
162 | 163 | 3.561503 | GGTGTGCGGTTTATGAGAAAAC | 58.438 | 45.455 | 0.00 | 0.00 | 38.39 | 2.43 |
163 | 164 | 3.003897 | GGTGTGCGGTTTATGAGAAAACA | 59.996 | 43.478 | 2.31 | 0.00 | 40.42 | 2.83 |
164 | 165 | 4.320935 | GGTGTGCGGTTTATGAGAAAACAT | 60.321 | 41.667 | 2.31 | 0.00 | 40.42 | 2.71 |
165 | 166 | 4.616802 | GTGTGCGGTTTATGAGAAAACATG | 59.383 | 41.667 | 0.00 | 0.00 | 40.42 | 3.21 |
166 | 167 | 3.608073 | GTGCGGTTTATGAGAAAACATGC | 59.392 | 43.478 | 0.00 | 5.67 | 40.42 | 4.06 |
167 | 168 | 3.254411 | TGCGGTTTATGAGAAAACATGCA | 59.746 | 39.130 | 11.89 | 11.89 | 43.67 | 3.96 |
168 | 169 | 3.853671 | GCGGTTTATGAGAAAACATGCAG | 59.146 | 43.478 | 0.00 | 0.00 | 40.42 | 4.41 |
169 | 170 | 4.615912 | GCGGTTTATGAGAAAACATGCAGT | 60.616 | 41.667 | 0.00 | 0.00 | 40.42 | 4.40 |
170 | 171 | 4.853196 | CGGTTTATGAGAAAACATGCAGTG | 59.147 | 41.667 | 0.00 | 0.00 | 40.42 | 3.66 |
171 | 172 | 5.163513 | GGTTTATGAGAAAACATGCAGTGG | 58.836 | 41.667 | 0.00 | 0.00 | 40.42 | 4.00 |
172 | 173 | 5.278957 | GGTTTATGAGAAAACATGCAGTGGT | 60.279 | 40.000 | 0.00 | 0.00 | 40.42 | 4.16 |
173 | 174 | 3.928727 | ATGAGAAAACATGCAGTGGTG | 57.071 | 42.857 | 0.00 | 0.00 | 0.00 | 4.17 |
174 | 175 | 2.929641 | TGAGAAAACATGCAGTGGTGA | 58.070 | 42.857 | 0.00 | 0.00 | 0.00 | 4.02 |
175 | 176 | 3.286353 | TGAGAAAACATGCAGTGGTGAA | 58.714 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
176 | 177 | 3.698539 | TGAGAAAACATGCAGTGGTGAAA | 59.301 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
177 | 178 | 4.202040 | TGAGAAAACATGCAGTGGTGAAAG | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.62 |
178 | 179 | 2.514205 | AAACATGCAGTGGTGAAAGC | 57.486 | 45.000 | 0.00 | 0.00 | 0.00 | 3.51 |
179 | 180 | 1.401761 | AACATGCAGTGGTGAAAGCA | 58.598 | 45.000 | 0.00 | 0.00 | 45.41 | 3.91 |
193 | 194 | 4.508461 | TGAAAGCATCACACCAAGAATG | 57.492 | 40.909 | 0.00 | 0.00 | 31.50 | 2.67 |
194 | 195 | 4.143543 | TGAAAGCATCACACCAAGAATGA | 58.856 | 39.130 | 0.00 | 0.00 | 31.50 | 2.57 |
195 | 196 | 4.583907 | TGAAAGCATCACACCAAGAATGAA | 59.416 | 37.500 | 0.00 | 0.00 | 31.50 | 2.57 |
196 | 197 | 5.068855 | TGAAAGCATCACACCAAGAATGAAA | 59.931 | 36.000 | 0.00 | 0.00 | 31.50 | 2.69 |
197 | 198 | 4.510038 | AGCATCACACCAAGAATGAAAC | 57.490 | 40.909 | 0.00 | 0.00 | 0.00 | 2.78 |
198 | 199 | 3.058016 | AGCATCACACCAAGAATGAAACG | 60.058 | 43.478 | 0.00 | 0.00 | 0.00 | 3.60 |
199 | 200 | 3.825308 | CATCACACCAAGAATGAAACGG | 58.175 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
200 | 201 | 3.201353 | TCACACCAAGAATGAAACGGA | 57.799 | 42.857 | 0.00 | 0.00 | 0.00 | 4.69 |
201 | 202 | 3.546724 | TCACACCAAGAATGAAACGGAA | 58.453 | 40.909 | 0.00 | 0.00 | 0.00 | 4.30 |
202 | 203 | 3.314080 | TCACACCAAGAATGAAACGGAAC | 59.686 | 43.478 | 0.00 | 0.00 | 0.00 | 3.62 |
203 | 204 | 2.621526 | ACACCAAGAATGAAACGGAACC | 59.378 | 45.455 | 0.00 | 0.00 | 0.00 | 3.62 |
204 | 205 | 1.877443 | ACCAAGAATGAAACGGAACCG | 59.123 | 47.619 | 11.83 | 11.83 | 46.03 | 4.44 |
205 | 206 | 2.147958 | CCAAGAATGAAACGGAACCGA | 58.852 | 47.619 | 20.14 | 0.00 | 42.83 | 4.69 |
206 | 207 | 2.747446 | CCAAGAATGAAACGGAACCGAT | 59.253 | 45.455 | 20.14 | 5.12 | 42.83 | 4.18 |
207 | 208 | 3.426159 | CCAAGAATGAAACGGAACCGATG | 60.426 | 47.826 | 20.14 | 4.62 | 42.83 | 3.84 |
208 | 209 | 1.737793 | AGAATGAAACGGAACCGATGC | 59.262 | 47.619 | 20.14 | 7.41 | 42.83 | 3.91 |
209 | 210 | 1.466950 | GAATGAAACGGAACCGATGCA | 59.533 | 47.619 | 20.14 | 13.22 | 42.83 | 3.96 |
210 | 211 | 1.750193 | ATGAAACGGAACCGATGCAT | 58.250 | 45.000 | 20.14 | 14.95 | 42.83 | 3.96 |
211 | 212 | 0.801872 | TGAAACGGAACCGATGCATG | 59.198 | 50.000 | 20.14 | 0.00 | 42.83 | 4.06 |
212 | 213 | 0.098728 | GAAACGGAACCGATGCATGG | 59.901 | 55.000 | 20.14 | 8.85 | 42.83 | 3.66 |
213 | 214 | 1.312371 | AAACGGAACCGATGCATGGG | 61.312 | 55.000 | 24.68 | 24.68 | 42.83 | 4.00 |
214 | 215 | 3.585990 | CGGAACCGATGCATGGGC | 61.586 | 66.667 | 26.01 | 11.72 | 42.83 | 5.36 |
215 | 216 | 3.219198 | GGAACCGATGCATGGGCC | 61.219 | 66.667 | 26.01 | 16.72 | 40.13 | 5.80 |
216 | 217 | 2.440065 | GAACCGATGCATGGGCCA | 60.440 | 61.111 | 26.01 | 9.61 | 40.13 | 5.36 |
217 | 218 | 2.037049 | AACCGATGCATGGGCCAA | 59.963 | 55.556 | 26.01 | 0.00 | 40.13 | 4.52 |
218 | 219 | 1.603236 | GAACCGATGCATGGGCCAAA | 61.603 | 55.000 | 26.01 | 0.00 | 40.13 | 3.28 |
219 | 220 | 1.190833 | AACCGATGCATGGGCCAAAA | 61.191 | 50.000 | 26.01 | 0.00 | 40.13 | 2.44 |
220 | 221 | 1.142314 | CCGATGCATGGGCCAAAAG | 59.858 | 57.895 | 15.33 | 4.77 | 40.13 | 2.27 |
221 | 222 | 1.321805 | CCGATGCATGGGCCAAAAGA | 61.322 | 55.000 | 15.33 | 0.00 | 40.13 | 2.52 |
222 | 223 | 0.101759 | CGATGCATGGGCCAAAAGAG | 59.898 | 55.000 | 11.89 | 0.00 | 40.13 | 2.85 |
223 | 224 | 1.188863 | GATGCATGGGCCAAAAGAGT | 58.811 | 50.000 | 11.89 | 0.00 | 40.13 | 3.24 |
224 | 225 | 2.378038 | GATGCATGGGCCAAAAGAGTA | 58.622 | 47.619 | 11.89 | 0.00 | 40.13 | 2.59 |
225 | 226 | 2.300956 | TGCATGGGCCAAAAGAGTAA | 57.699 | 45.000 | 11.89 | 0.00 | 40.13 | 2.24 |
226 | 227 | 2.170166 | TGCATGGGCCAAAAGAGTAAG | 58.830 | 47.619 | 11.89 | 0.00 | 40.13 | 2.34 |
227 | 228 | 2.224992 | TGCATGGGCCAAAAGAGTAAGA | 60.225 | 45.455 | 11.89 | 0.00 | 40.13 | 2.10 |
228 | 229 | 2.164422 | GCATGGGCCAAAAGAGTAAGAC | 59.836 | 50.000 | 11.89 | 0.00 | 0.00 | 3.01 |
229 | 230 | 2.579410 | TGGGCCAAAAGAGTAAGACC | 57.421 | 50.000 | 2.13 | 0.00 | 0.00 | 3.85 |
230 | 231 | 1.777878 | TGGGCCAAAAGAGTAAGACCA | 59.222 | 47.619 | 2.13 | 0.00 | 0.00 | 4.02 |
231 | 232 | 2.224769 | TGGGCCAAAAGAGTAAGACCAG | 60.225 | 50.000 | 2.13 | 0.00 | 0.00 | 4.00 |
232 | 233 | 2.224793 | GGGCCAAAAGAGTAAGACCAGT | 60.225 | 50.000 | 4.39 | 0.00 | 0.00 | 4.00 |
233 | 234 | 3.487372 | GGCCAAAAGAGTAAGACCAGTT | 58.513 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
234 | 235 | 3.889538 | GGCCAAAAGAGTAAGACCAGTTT | 59.110 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
235 | 236 | 4.023107 | GGCCAAAAGAGTAAGACCAGTTTC | 60.023 | 45.833 | 0.00 | 0.00 | 0.00 | 2.78 |
236 | 237 | 4.578928 | GCCAAAAGAGTAAGACCAGTTTCA | 59.421 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
237 | 238 | 5.067283 | GCCAAAAGAGTAAGACCAGTTTCAA | 59.933 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
238 | 239 | 6.495706 | CCAAAAGAGTAAGACCAGTTTCAAC | 58.504 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
239 | 240 | 6.094881 | CCAAAAGAGTAAGACCAGTTTCAACA | 59.905 | 38.462 | 0.00 | 0.00 | 0.00 | 3.33 |
240 | 241 | 7.362574 | CCAAAAGAGTAAGACCAGTTTCAACAA | 60.363 | 37.037 | 0.00 | 0.00 | 0.00 | 2.83 |
241 | 242 | 7.881775 | AAAGAGTAAGACCAGTTTCAACAAT | 57.118 | 32.000 | 0.00 | 0.00 | 0.00 | 2.71 |
242 | 243 | 6.867662 | AGAGTAAGACCAGTTTCAACAATG | 57.132 | 37.500 | 0.00 | 0.00 | 0.00 | 2.82 |
243 | 244 | 6.357367 | AGAGTAAGACCAGTTTCAACAATGT | 58.643 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
244 | 245 | 6.260936 | AGAGTAAGACCAGTTTCAACAATGTG | 59.739 | 38.462 | 0.00 | 0.00 | 0.00 | 3.21 |
245 | 246 | 6.119536 | AGTAAGACCAGTTTCAACAATGTGA | 58.880 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
246 | 247 | 4.900635 | AGACCAGTTTCAACAATGTGAC | 57.099 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
247 | 248 | 3.312421 | AGACCAGTTTCAACAATGTGACG | 59.688 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
248 | 249 | 3.275143 | ACCAGTTTCAACAATGTGACGA | 58.725 | 40.909 | 0.00 | 0.00 | 0.00 | 4.20 |
249 | 250 | 3.882888 | ACCAGTTTCAACAATGTGACGAT | 59.117 | 39.130 | 0.00 | 0.00 | 0.00 | 3.73 |
250 | 251 | 4.221342 | CCAGTTTCAACAATGTGACGATG | 58.779 | 43.478 | 0.00 | 0.00 | 0.00 | 3.84 |
251 | 252 | 3.665409 | CAGTTTCAACAATGTGACGATGC | 59.335 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
252 | 253 | 3.565482 | AGTTTCAACAATGTGACGATGCT | 59.435 | 39.130 | 0.00 | 0.00 | 0.00 | 3.79 |
253 | 254 | 4.036734 | AGTTTCAACAATGTGACGATGCTT | 59.963 | 37.500 | 0.00 | 0.00 | 0.00 | 3.91 |
254 | 255 | 5.238432 | AGTTTCAACAATGTGACGATGCTTA | 59.762 | 36.000 | 0.00 | 0.00 | 0.00 | 3.09 |
255 | 256 | 4.661993 | TCAACAATGTGACGATGCTTAC | 57.338 | 40.909 | 0.00 | 0.00 | 0.00 | 2.34 |
256 | 257 | 3.122780 | TCAACAATGTGACGATGCTTACG | 59.877 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
257 | 258 | 2.683968 | ACAATGTGACGATGCTTACGT | 58.316 | 42.857 | 0.00 | 0.00 | 46.58 | 3.57 |
258 | 259 | 3.064207 | ACAATGTGACGATGCTTACGTT | 58.936 | 40.909 | 0.00 | 0.00 | 43.97 | 3.99 |
259 | 260 | 3.122948 | ACAATGTGACGATGCTTACGTTC | 59.877 | 43.478 | 0.00 | 0.00 | 43.97 | 3.95 |
260 | 261 | 1.333115 | TGTGACGATGCTTACGTTCG | 58.667 | 50.000 | 5.11 | 5.11 | 43.97 | 3.95 |
261 | 262 | 1.069091 | TGTGACGATGCTTACGTTCGA | 60.069 | 47.619 | 13.09 | 0.00 | 43.97 | 3.71 |
262 | 263 | 1.316735 | GTGACGATGCTTACGTTCGAC | 59.683 | 52.381 | 13.09 | 7.70 | 43.97 | 4.20 |
263 | 264 | 1.069091 | TGACGATGCTTACGTTCGACA | 60.069 | 47.619 | 13.09 | 10.12 | 43.97 | 4.35 |
264 | 265 | 1.578023 | GACGATGCTTACGTTCGACAG | 59.422 | 52.381 | 13.09 | 0.00 | 43.97 | 3.51 |
265 | 266 | 1.198408 | ACGATGCTTACGTTCGACAGA | 59.802 | 47.619 | 13.09 | 0.00 | 41.18 | 3.41 |
266 | 267 | 2.247637 | CGATGCTTACGTTCGACAGAA | 58.752 | 47.619 | 0.00 | 0.00 | 34.92 | 3.02 |
286 | 287 | 6.748333 | AGAACCATTCTGTTGATGTGTATG | 57.252 | 37.500 | 0.00 | 0.00 | 38.91 | 2.39 |
287 | 288 | 6.240894 | AGAACCATTCTGTTGATGTGTATGT | 58.759 | 36.000 | 0.00 | 0.00 | 38.91 | 2.29 |
288 | 289 | 5.885230 | ACCATTCTGTTGATGTGTATGTG | 57.115 | 39.130 | 0.00 | 0.00 | 0.00 | 3.21 |
289 | 290 | 4.701651 | ACCATTCTGTTGATGTGTATGTGG | 59.298 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
290 | 291 | 4.943093 | CCATTCTGTTGATGTGTATGTGGA | 59.057 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
291 | 292 | 5.163723 | CCATTCTGTTGATGTGTATGTGGAC | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 4.02 |
292 | 293 | 4.615588 | TCTGTTGATGTGTATGTGGACA | 57.384 | 40.909 | 0.00 | 0.00 | 0.00 | 4.02 |
293 | 294 | 5.164620 | TCTGTTGATGTGTATGTGGACAT | 57.835 | 39.130 | 0.00 | 0.00 | 40.22 | 3.06 |
294 | 295 | 4.937015 | TCTGTTGATGTGTATGTGGACATG | 59.063 | 41.667 | 2.38 | 0.00 | 37.15 | 3.21 |
295 | 296 | 3.439825 | TGTTGATGTGTATGTGGACATGC | 59.560 | 43.478 | 2.38 | 1.79 | 39.06 | 4.06 |
296 | 297 | 3.632643 | TGATGTGTATGTGGACATGCT | 57.367 | 42.857 | 8.96 | 0.00 | 39.30 | 3.79 |
297 | 298 | 4.751767 | TGATGTGTATGTGGACATGCTA | 57.248 | 40.909 | 8.96 | 0.17 | 39.30 | 3.49 |
298 | 299 | 5.096443 | TGATGTGTATGTGGACATGCTAA | 57.904 | 39.130 | 8.96 | 0.00 | 39.30 | 3.09 |
299 | 300 | 5.495640 | TGATGTGTATGTGGACATGCTAAA | 58.504 | 37.500 | 8.96 | 0.00 | 39.30 | 1.85 |
300 | 301 | 5.353956 | TGATGTGTATGTGGACATGCTAAAC | 59.646 | 40.000 | 8.96 | 1.00 | 39.30 | 2.01 |
301 | 302 | 3.682377 | TGTGTATGTGGACATGCTAAACG | 59.318 | 43.478 | 8.96 | 0.00 | 39.30 | 3.60 |
302 | 303 | 3.063452 | GTGTATGTGGACATGCTAAACGG | 59.937 | 47.826 | 8.96 | 0.00 | 39.30 | 4.44 |
303 | 304 | 2.489938 | ATGTGGACATGCTAAACGGT | 57.510 | 45.000 | 0.00 | 0.00 | 34.83 | 4.83 |
304 | 305 | 1.518325 | TGTGGACATGCTAAACGGTG | 58.482 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
305 | 306 | 1.070914 | TGTGGACATGCTAAACGGTGA | 59.929 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
306 | 307 | 1.732259 | GTGGACATGCTAAACGGTGAG | 59.268 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
307 | 308 | 0.727398 | GGACATGCTAAACGGTGAGC | 59.273 | 55.000 | 1.57 | 1.57 | 39.25 | 4.26 |
308 | 309 | 0.370273 | GACATGCTAAACGGTGAGCG | 59.630 | 55.000 | 5.06 | 1.13 | 41.83 | 5.03 |
309 | 310 | 0.037697 | ACATGCTAAACGGTGAGCGA | 60.038 | 50.000 | 12.27 | 0.00 | 41.83 | 4.93 |
310 | 311 | 1.290203 | CATGCTAAACGGTGAGCGAT | 58.710 | 50.000 | 12.27 | 0.00 | 41.83 | 4.58 |
311 | 312 | 1.258982 | CATGCTAAACGGTGAGCGATC | 59.741 | 52.381 | 12.27 | 0.00 | 41.83 | 3.69 |
312 | 313 | 0.459585 | TGCTAAACGGTGAGCGATCC | 60.460 | 55.000 | 12.27 | 0.00 | 41.83 | 3.36 |
313 | 314 | 1.152383 | GCTAAACGGTGAGCGATCCC | 61.152 | 60.000 | 12.27 | 0.00 | 0.00 | 3.85 |
314 | 315 | 0.174845 | CTAAACGGTGAGCGATCCCA | 59.825 | 55.000 | 12.27 | 0.00 | 0.00 | 4.37 |
315 | 316 | 0.609151 | TAAACGGTGAGCGATCCCAA | 59.391 | 50.000 | 12.27 | 0.00 | 0.00 | 4.12 |
316 | 317 | 0.673644 | AAACGGTGAGCGATCCCAAG | 60.674 | 55.000 | 12.27 | 0.00 | 0.00 | 3.61 |
317 | 318 | 2.892425 | CGGTGAGCGATCCCAAGC | 60.892 | 66.667 | 0.00 | 0.00 | 0.00 | 4.01 |
318 | 319 | 2.892425 | GGTGAGCGATCCCAAGCG | 60.892 | 66.667 | 0.00 | 0.00 | 38.61 | 4.68 |
319 | 320 | 2.184322 | GTGAGCGATCCCAAGCGA | 59.816 | 61.111 | 0.00 | 0.00 | 36.04 | 4.93 |
320 | 321 | 2.167861 | GTGAGCGATCCCAAGCGAC | 61.168 | 63.158 | 0.00 | 0.00 | 36.04 | 5.19 |
321 | 322 | 2.351244 | TGAGCGATCCCAAGCGACT | 61.351 | 57.895 | 0.00 | 0.00 | 36.04 | 4.18 |
322 | 323 | 1.880340 | GAGCGATCCCAAGCGACTG | 60.880 | 63.158 | 0.00 | 0.00 | 36.04 | 3.51 |
323 | 324 | 2.184322 | GCGATCCCAAGCGACTGA | 59.816 | 61.111 | 0.00 | 0.00 | 36.04 | 3.41 |
324 | 325 | 1.447838 | GCGATCCCAAGCGACTGAA | 60.448 | 57.895 | 0.00 | 0.00 | 36.04 | 3.02 |
325 | 326 | 1.019278 | GCGATCCCAAGCGACTGAAA | 61.019 | 55.000 | 0.00 | 0.00 | 36.04 | 2.69 |
326 | 327 | 1.438651 | CGATCCCAAGCGACTGAAAA | 58.561 | 50.000 | 0.00 | 0.00 | 36.04 | 2.29 |
327 | 328 | 1.804151 | CGATCCCAAGCGACTGAAAAA | 59.196 | 47.619 | 0.00 | 0.00 | 36.04 | 1.94 |
344 | 345 | 2.341846 | AAAAGGAGTTGAGGTTGCGA | 57.658 | 45.000 | 0.00 | 0.00 | 0.00 | 5.10 |
345 | 346 | 2.568623 | AAAGGAGTTGAGGTTGCGAT | 57.431 | 45.000 | 0.00 | 0.00 | 0.00 | 4.58 |
346 | 347 | 3.695830 | AAAGGAGTTGAGGTTGCGATA | 57.304 | 42.857 | 0.00 | 0.00 | 0.00 | 2.92 |
347 | 348 | 2.674796 | AGGAGTTGAGGTTGCGATAC | 57.325 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
348 | 349 | 2.180276 | AGGAGTTGAGGTTGCGATACT | 58.820 | 47.619 | 0.00 | 0.00 | 0.00 | 2.12 |
349 | 350 | 2.166664 | AGGAGTTGAGGTTGCGATACTC | 59.833 | 50.000 | 0.00 | 0.00 | 33.12 | 2.59 |
350 | 351 | 2.186076 | GAGTTGAGGTTGCGATACTCG | 58.814 | 52.381 | 0.00 | 0.00 | 43.89 | 4.18 |
503 | 507 | 6.588204 | TGCAGAGTAAAAAGAACTGAGGTTA | 58.412 | 36.000 | 0.00 | 0.00 | 35.58 | 2.85 |
527 | 531 | 6.276847 | AGTACATATCTACTGAAAGCTGCAC | 58.723 | 40.000 | 1.02 | 0.00 | 37.60 | 4.57 |
549 | 553 | 0.032540 | CCATCGCTCGACCATCATCA | 59.967 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 |
553 | 557 | 2.230660 | TCGCTCGACCATCATCATAGT | 58.769 | 47.619 | 0.00 | 0.00 | 0.00 | 2.12 |
557 | 561 | 4.318333 | CGCTCGACCATCATCATAGTTTTG | 60.318 | 45.833 | 0.00 | 0.00 | 0.00 | 2.44 |
578 | 592 | 3.636764 | TGAAGTGCTATAGCTTCCGATCA | 59.363 | 43.478 | 24.61 | 16.12 | 40.07 | 2.92 |
624 | 638 | 4.201980 | CGATGATCTTGTTGACCATGCATT | 60.202 | 41.667 | 0.00 | 0.00 | 26.51 | 3.56 |
643 | 657 | 4.082571 | GCATTCATATGATAGGGTTGCACC | 60.083 | 45.833 | 6.17 | 0.00 | 33.70 | 5.01 |
650 | 664 | 4.374689 | TGATAGGGTTGCACCAGTTAAA | 57.625 | 40.909 | 7.49 | 0.00 | 41.02 | 1.52 |
651 | 665 | 4.331968 | TGATAGGGTTGCACCAGTTAAAG | 58.668 | 43.478 | 7.49 | 0.00 | 41.02 | 1.85 |
652 | 666 | 2.748209 | AGGGTTGCACCAGTTAAAGT | 57.252 | 45.000 | 7.49 | 0.00 | 41.02 | 2.66 |
656 | 670 | 4.139038 | GGGTTGCACCAGTTAAAGTAAGA | 58.861 | 43.478 | 7.49 | 0.00 | 41.02 | 2.10 |
657 | 671 | 4.765339 | GGGTTGCACCAGTTAAAGTAAGAT | 59.235 | 41.667 | 7.49 | 0.00 | 41.02 | 2.40 |
658 | 672 | 5.941647 | GGGTTGCACCAGTTAAAGTAAGATA | 59.058 | 40.000 | 7.49 | 0.00 | 41.02 | 1.98 |
669 | 686 | 9.303537 | CAGTTAAAGTAAGATAAGAGTGCCTAC | 57.696 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
703 | 720 | 3.772025 | AGAAGAGAGATTGACCACCGATT | 59.228 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
723 | 740 | 1.134699 | TGATACGGAGAGGTACGTCGT | 60.135 | 52.381 | 9.77 | 2.21 | 43.02 | 4.34 |
780 | 797 | 2.336554 | ACGTCAACATTTGCATCTGC | 57.663 | 45.000 | 0.00 | 0.00 | 42.50 | 4.26 |
845 | 863 | 6.641474 | ACTGGCCTAGTGACTTTTAGTATTC | 58.359 | 40.000 | 3.32 | 0.00 | 38.49 | 1.75 |
955 | 978 | 5.472478 | TCCTCGCTGTATATAAGGTACTGTG | 59.528 | 44.000 | 0.00 | 0.00 | 40.86 | 3.66 |
1043 | 1066 | 2.125512 | CCACTGCTACCACGGCTC | 60.126 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
1088 | 1111 | 1.205655 | ACACTACACGCATCATCAGCT | 59.794 | 47.619 | 0.00 | 0.00 | 0.00 | 4.24 |
1090 | 1113 | 2.283617 | CACTACACGCATCATCAGCTTC | 59.716 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1119 | 1142 | 1.135460 | GCTCAAGCTCAAGTTCATGCC | 60.135 | 52.381 | 0.00 | 0.00 | 38.21 | 4.40 |
1147 | 1170 | 1.078759 | GATCGACCACCAGCTGTTCG | 61.079 | 60.000 | 13.81 | 14.33 | 0.00 | 3.95 |
1161 | 1184 | 1.125093 | TGTTCGCCTTCTCCTTCCCA | 61.125 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
1192 | 1215 | 2.257207 | CCTCCACCTCCTTCACTACAA | 58.743 | 52.381 | 0.00 | 0.00 | 0.00 | 2.41 |
1193 | 1216 | 2.028020 | CCTCCACCTCCTTCACTACAAC | 60.028 | 54.545 | 0.00 | 0.00 | 0.00 | 3.32 |
1194 | 1217 | 2.632996 | CTCCACCTCCTTCACTACAACA | 59.367 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
1200 | 1223 | 1.616865 | TCCTTCACTACAACACCTCCG | 59.383 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
1443 | 1469 | 3.394836 | GACCAGGCCGCCTTCTCT | 61.395 | 66.667 | 9.99 | 0.00 | 0.00 | 3.10 |
1759 | 1797 | 3.953775 | CCACCCAACCGCTCCTGT | 61.954 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
1999 | 2072 | 2.349755 | ACCGCGGGTGCACTTAAT | 59.650 | 55.556 | 31.76 | 0.00 | 42.97 | 1.40 |
2009 | 2082 | 4.069304 | GGGTGCACTTAATTCACACTACA | 58.931 | 43.478 | 17.98 | 0.00 | 31.79 | 2.74 |
2015 | 2088 | 5.796935 | GCACTTAATTCACACTACATGCAAG | 59.203 | 40.000 | 0.00 | 0.00 | 0.00 | 4.01 |
2072 | 2145 | 1.333308 | CAATCAAGTCACACACGCCAA | 59.667 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
2157 | 2231 | 0.037590 | AGGGCCGTATTGCAAAGTCA | 59.962 | 50.000 | 1.71 | 0.00 | 0.00 | 3.41 |
2505 | 2629 | 1.757306 | CCTCAAGAGGTGTGGCAGT | 59.243 | 57.895 | 7.98 | 0.00 | 43.61 | 4.40 |
2677 | 2801 | 0.032130 | GCCGCGATGGATTCTCACTA | 59.968 | 55.000 | 8.23 | 0.00 | 42.00 | 2.74 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
2 | 3 | 3.849145 | CGCAAACTTGAGTTTCGTTTCAA | 59.151 | 39.130 | 6.16 | 0.00 | 45.54 | 2.69 |
3 | 4 | 3.421741 | CGCAAACTTGAGTTTCGTTTCA | 58.578 | 40.909 | 6.16 | 0.00 | 45.54 | 2.69 |
4 | 5 | 2.213353 | GCGCAAACTTGAGTTTCGTTTC | 59.787 | 45.455 | 19.45 | 8.27 | 45.54 | 2.78 |
5 | 6 | 2.159435 | AGCGCAAACTTGAGTTTCGTTT | 60.159 | 40.909 | 11.47 | 11.69 | 45.54 | 3.60 |
6 | 7 | 1.400494 | AGCGCAAACTTGAGTTTCGTT | 59.600 | 42.857 | 11.47 | 14.90 | 45.54 | 3.85 |
7 | 8 | 1.014352 | AGCGCAAACTTGAGTTTCGT | 58.986 | 45.000 | 11.47 | 10.61 | 45.54 | 3.85 |
8 | 9 | 2.105323 | AAGCGCAAACTTGAGTTTCG | 57.895 | 45.000 | 11.47 | 16.68 | 45.54 | 3.46 |
16 | 17 | 4.436852 | CGTCCATATAACAAGCGCAAACTT | 60.437 | 41.667 | 11.47 | 0.00 | 0.00 | 2.66 |
17 | 18 | 3.063452 | CGTCCATATAACAAGCGCAAACT | 59.937 | 43.478 | 11.47 | 0.00 | 0.00 | 2.66 |
18 | 19 | 3.350912 | CGTCCATATAACAAGCGCAAAC | 58.649 | 45.455 | 11.47 | 0.00 | 0.00 | 2.93 |
19 | 20 | 2.353269 | CCGTCCATATAACAAGCGCAAA | 59.647 | 45.455 | 11.47 | 0.00 | 0.00 | 3.68 |
20 | 21 | 1.937223 | CCGTCCATATAACAAGCGCAA | 59.063 | 47.619 | 11.47 | 0.00 | 0.00 | 4.85 |
21 | 22 | 1.137282 | TCCGTCCATATAACAAGCGCA | 59.863 | 47.619 | 11.47 | 0.00 | 0.00 | 6.09 |
22 | 23 | 1.792949 | CTCCGTCCATATAACAAGCGC | 59.207 | 52.381 | 0.00 | 0.00 | 0.00 | 5.92 |
23 | 24 | 3.364889 | TCTCCGTCCATATAACAAGCG | 57.635 | 47.619 | 0.00 | 0.00 | 0.00 | 4.68 |
24 | 25 | 3.433615 | GCATCTCCGTCCATATAACAAGC | 59.566 | 47.826 | 0.00 | 0.00 | 0.00 | 4.01 |
25 | 26 | 3.675225 | CGCATCTCCGTCCATATAACAAG | 59.325 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
26 | 27 | 3.554129 | CCGCATCTCCGTCCATATAACAA | 60.554 | 47.826 | 0.00 | 0.00 | 0.00 | 2.83 |
27 | 28 | 2.029380 | CCGCATCTCCGTCCATATAACA | 60.029 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
28 | 29 | 2.607187 | CCGCATCTCCGTCCATATAAC | 58.393 | 52.381 | 0.00 | 0.00 | 0.00 | 1.89 |
29 | 30 | 1.067142 | GCCGCATCTCCGTCCATATAA | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 0.98 |
30 | 31 | 0.530744 | GCCGCATCTCCGTCCATATA | 59.469 | 55.000 | 0.00 | 0.00 | 0.00 | 0.86 |
31 | 32 | 1.293498 | GCCGCATCTCCGTCCATAT | 59.707 | 57.895 | 0.00 | 0.00 | 0.00 | 1.78 |
32 | 33 | 2.734591 | GCCGCATCTCCGTCCATA | 59.265 | 61.111 | 0.00 | 0.00 | 0.00 | 2.74 |
33 | 34 | 4.241555 | GGCCGCATCTCCGTCCAT | 62.242 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
35 | 36 | 4.467084 | TTGGCCGCATCTCCGTCC | 62.467 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
36 | 37 | 3.195698 | GTTGGCCGCATCTCCGTC | 61.196 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
37 | 38 | 3.545124 | TTGTTGGCCGCATCTCCGT | 62.545 | 57.895 | 0.00 | 0.00 | 0.00 | 4.69 |
38 | 39 | 2.745884 | TTGTTGGCCGCATCTCCG | 60.746 | 61.111 | 0.00 | 0.00 | 0.00 | 4.63 |
39 | 40 | 3.056313 | GCTTGTTGGCCGCATCTCC | 62.056 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
40 | 41 | 2.486966 | GCTTGTTGGCCGCATCTC | 59.513 | 61.111 | 0.00 | 0.00 | 0.00 | 2.75 |
41 | 42 | 3.434319 | CGCTTGTTGGCCGCATCT | 61.434 | 61.111 | 0.00 | 0.00 | 0.00 | 2.90 |
48 | 49 | 2.914777 | TTTTGGGTGCGCTTGTTGGC | 62.915 | 55.000 | 9.73 | 0.00 | 0.00 | 4.52 |
49 | 50 | 0.460987 | TTTTTGGGTGCGCTTGTTGG | 60.461 | 50.000 | 9.73 | 0.00 | 0.00 | 3.77 |
50 | 51 | 0.649993 | GTTTTTGGGTGCGCTTGTTG | 59.350 | 50.000 | 9.73 | 0.00 | 0.00 | 3.33 |
51 | 52 | 0.461163 | GGTTTTTGGGTGCGCTTGTT | 60.461 | 50.000 | 9.73 | 0.00 | 0.00 | 2.83 |
52 | 53 | 1.142965 | GGTTTTTGGGTGCGCTTGT | 59.857 | 52.632 | 9.73 | 0.00 | 0.00 | 3.16 |
53 | 54 | 0.179086 | AAGGTTTTTGGGTGCGCTTG | 60.179 | 50.000 | 9.73 | 0.00 | 0.00 | 4.01 |
54 | 55 | 0.179086 | CAAGGTTTTTGGGTGCGCTT | 60.179 | 50.000 | 9.73 | 0.00 | 0.00 | 4.68 |
55 | 56 | 1.040339 | TCAAGGTTTTTGGGTGCGCT | 61.040 | 50.000 | 9.73 | 0.00 | 0.00 | 5.92 |
56 | 57 | 0.179097 | TTCAAGGTTTTTGGGTGCGC | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 6.09 |
57 | 58 | 2.301577 | TTTCAAGGTTTTTGGGTGCG | 57.698 | 45.000 | 0.00 | 0.00 | 0.00 | 5.34 |
58 | 59 | 3.944650 | ACATTTTCAAGGTTTTTGGGTGC | 59.055 | 39.130 | 0.00 | 0.00 | 0.00 | 5.01 |
59 | 60 | 8.894768 | TTATACATTTTCAAGGTTTTTGGGTG | 57.105 | 30.769 | 0.00 | 0.00 | 0.00 | 4.61 |
60 | 61 | 9.719355 | GATTATACATTTTCAAGGTTTTTGGGT | 57.281 | 29.630 | 0.00 | 0.00 | 0.00 | 4.51 |
61 | 62 | 9.717942 | TGATTATACATTTTCAAGGTTTTTGGG | 57.282 | 29.630 | 0.00 | 0.00 | 0.00 | 4.12 |
66 | 67 | 9.927668 | CAACCTGATTATACATTTTCAAGGTTT | 57.072 | 29.630 | 0.00 | 0.00 | 32.38 | 3.27 |
67 | 68 | 9.088987 | ACAACCTGATTATACATTTTCAAGGTT | 57.911 | 29.630 | 0.00 | 0.00 | 33.67 | 3.50 |
68 | 69 | 8.650143 | ACAACCTGATTATACATTTTCAAGGT | 57.350 | 30.769 | 0.00 | 0.00 | 0.00 | 3.50 |
69 | 70 | 9.573133 | GAACAACCTGATTATACATTTTCAAGG | 57.427 | 33.333 | 0.00 | 0.00 | 0.00 | 3.61 |
78 | 79 | 9.613428 | CTCCTTAATGAACAACCTGATTATACA | 57.387 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
79 | 80 | 9.832445 | TCTCCTTAATGAACAACCTGATTATAC | 57.168 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
81 | 82 | 9.178758 | GTTCTCCTTAATGAACAACCTGATTAT | 57.821 | 33.333 | 9.70 | 0.00 | 41.35 | 1.28 |
82 | 83 | 7.610305 | GGTTCTCCTTAATGAACAACCTGATTA | 59.390 | 37.037 | 14.04 | 0.00 | 42.91 | 1.75 |
83 | 84 | 6.434340 | GGTTCTCCTTAATGAACAACCTGATT | 59.566 | 38.462 | 14.04 | 0.00 | 42.91 | 2.57 |
84 | 85 | 5.946377 | GGTTCTCCTTAATGAACAACCTGAT | 59.054 | 40.000 | 14.04 | 0.00 | 42.91 | 2.90 |
85 | 86 | 5.073144 | AGGTTCTCCTTAATGAACAACCTGA | 59.927 | 40.000 | 16.73 | 0.00 | 42.12 | 3.86 |
86 | 87 | 5.182001 | CAGGTTCTCCTTAATGAACAACCTG | 59.818 | 44.000 | 23.02 | 23.02 | 42.80 | 4.00 |
87 | 88 | 5.073144 | TCAGGTTCTCCTTAATGAACAACCT | 59.927 | 40.000 | 13.76 | 13.76 | 43.07 | 3.50 |
88 | 89 | 5.313712 | TCAGGTTCTCCTTAATGAACAACC | 58.686 | 41.667 | 14.04 | 12.47 | 43.07 | 3.77 |
89 | 90 | 6.877611 | TTCAGGTTCTCCTTAATGAACAAC | 57.122 | 37.500 | 14.04 | 6.25 | 43.07 | 3.32 |
95 | 96 | 5.116084 | TCCCATTCAGGTTCTCCTTAATG | 57.884 | 43.478 | 11.83 | 11.83 | 46.68 | 1.90 |
96 | 97 | 4.790790 | ACTCCCATTCAGGTTCTCCTTAAT | 59.209 | 41.667 | 0.00 | 0.00 | 43.07 | 1.40 |
97 | 98 | 4.175962 | ACTCCCATTCAGGTTCTCCTTAA | 58.824 | 43.478 | 0.00 | 0.00 | 43.07 | 1.85 |
98 | 99 | 3.775316 | GACTCCCATTCAGGTTCTCCTTA | 59.225 | 47.826 | 0.00 | 0.00 | 43.07 | 2.69 |
99 | 100 | 2.573915 | GACTCCCATTCAGGTTCTCCTT | 59.426 | 50.000 | 0.00 | 0.00 | 43.07 | 3.36 |
100 | 101 | 2.192263 | GACTCCCATTCAGGTTCTCCT | 58.808 | 52.381 | 0.00 | 0.00 | 46.37 | 3.69 |
101 | 102 | 2.192263 | AGACTCCCATTCAGGTTCTCC | 58.808 | 52.381 | 0.00 | 0.00 | 34.66 | 3.71 |
102 | 103 | 3.261897 | TGAAGACTCCCATTCAGGTTCTC | 59.738 | 47.826 | 0.00 | 0.00 | 34.66 | 2.87 |
103 | 104 | 3.251484 | TGAAGACTCCCATTCAGGTTCT | 58.749 | 45.455 | 0.00 | 0.00 | 34.66 | 3.01 |
104 | 105 | 3.703001 | TGAAGACTCCCATTCAGGTTC | 57.297 | 47.619 | 0.00 | 0.00 | 34.66 | 3.62 |
105 | 106 | 3.331889 | ACATGAAGACTCCCATTCAGGTT | 59.668 | 43.478 | 0.00 | 0.00 | 45.21 | 3.50 |
106 | 107 | 2.915604 | ACATGAAGACTCCCATTCAGGT | 59.084 | 45.455 | 0.00 | 0.00 | 43.39 | 4.00 |
107 | 108 | 3.641434 | ACATGAAGACTCCCATTCAGG | 57.359 | 47.619 | 0.00 | 0.00 | 41.62 | 3.86 |
108 | 109 | 4.582869 | TGAACATGAAGACTCCCATTCAG | 58.417 | 43.478 | 0.00 | 0.00 | 38.72 | 3.02 |
109 | 110 | 4.639078 | TGAACATGAAGACTCCCATTCA | 57.361 | 40.909 | 0.00 | 0.00 | 39.59 | 2.57 |
110 | 111 | 5.123027 | GTCTTGAACATGAAGACTCCCATTC | 59.877 | 44.000 | 15.18 | 0.00 | 44.02 | 2.67 |
111 | 112 | 5.006386 | GTCTTGAACATGAAGACTCCCATT | 58.994 | 41.667 | 15.18 | 0.00 | 44.02 | 3.16 |
112 | 113 | 4.042062 | TGTCTTGAACATGAAGACTCCCAT | 59.958 | 41.667 | 20.36 | 0.00 | 46.42 | 4.00 |
113 | 114 | 3.390967 | TGTCTTGAACATGAAGACTCCCA | 59.609 | 43.478 | 20.36 | 4.31 | 46.42 | 4.37 |
114 | 115 | 3.748568 | GTGTCTTGAACATGAAGACTCCC | 59.251 | 47.826 | 20.36 | 9.52 | 46.42 | 4.30 |
115 | 116 | 3.430218 | CGTGTCTTGAACATGAAGACTCC | 59.570 | 47.826 | 20.36 | 12.92 | 46.13 | 3.85 |
116 | 117 | 4.637574 | CGTGTCTTGAACATGAAGACTC | 57.362 | 45.455 | 20.36 | 16.96 | 46.13 | 3.36 |
123 | 124 | 1.270839 | ACCCCTCGTGTCTTGAACATG | 60.271 | 52.381 | 0.00 | 0.00 | 44.84 | 3.21 |
124 | 125 | 1.056660 | ACCCCTCGTGTCTTGAACAT | 58.943 | 50.000 | 0.00 | 0.00 | 40.80 | 2.71 |
125 | 126 | 0.105964 | CACCCCTCGTGTCTTGAACA | 59.894 | 55.000 | 0.00 | 0.00 | 37.73 | 3.18 |
126 | 127 | 2.914379 | CACCCCTCGTGTCTTGAAC | 58.086 | 57.895 | 0.00 | 0.00 | 37.73 | 3.18 |
135 | 136 | 1.833787 | ATAAACCGCACACCCCTCGT | 61.834 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
136 | 137 | 1.078708 | ATAAACCGCACACCCCTCG | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 4.63 |
137 | 138 | 0.035820 | TCATAAACCGCACACCCCTC | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
138 | 139 | 0.035439 | CTCATAAACCGCACACCCCT | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
139 | 140 | 0.035820 | TCTCATAAACCGCACACCCC | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 4.95 |
140 | 141 | 1.816074 | TTCTCATAAACCGCACACCC | 58.184 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
141 | 142 | 3.003897 | TGTTTTCTCATAAACCGCACACC | 59.996 | 43.478 | 0.00 | 0.00 | 37.24 | 4.16 |
142 | 143 | 4.217754 | TGTTTTCTCATAAACCGCACAC | 57.782 | 40.909 | 0.00 | 0.00 | 37.24 | 3.82 |
143 | 144 | 4.793071 | CATGTTTTCTCATAAACCGCACA | 58.207 | 39.130 | 0.00 | 0.00 | 37.24 | 4.57 |
144 | 145 | 3.608073 | GCATGTTTTCTCATAAACCGCAC | 59.392 | 43.478 | 0.00 | 0.00 | 37.24 | 5.34 |
145 | 146 | 3.254411 | TGCATGTTTTCTCATAAACCGCA | 59.746 | 39.130 | 0.00 | 0.00 | 40.27 | 5.69 |
146 | 147 | 3.832276 | TGCATGTTTTCTCATAAACCGC | 58.168 | 40.909 | 0.00 | 0.00 | 37.24 | 5.68 |
147 | 148 | 4.853196 | CACTGCATGTTTTCTCATAAACCG | 59.147 | 41.667 | 0.00 | 0.00 | 37.24 | 4.44 |
148 | 149 | 5.163513 | CCACTGCATGTTTTCTCATAAACC | 58.836 | 41.667 | 0.00 | 0.00 | 37.24 | 3.27 |
149 | 150 | 5.630680 | CACCACTGCATGTTTTCTCATAAAC | 59.369 | 40.000 | 0.00 | 0.00 | 38.26 | 2.01 |
150 | 151 | 5.534278 | TCACCACTGCATGTTTTCTCATAAA | 59.466 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
151 | 152 | 5.069318 | TCACCACTGCATGTTTTCTCATAA | 58.931 | 37.500 | 0.00 | 0.00 | 0.00 | 1.90 |
152 | 153 | 4.650734 | TCACCACTGCATGTTTTCTCATA | 58.349 | 39.130 | 0.00 | 0.00 | 0.00 | 2.15 |
153 | 154 | 3.489355 | TCACCACTGCATGTTTTCTCAT | 58.511 | 40.909 | 0.00 | 0.00 | 0.00 | 2.90 |
154 | 155 | 2.929641 | TCACCACTGCATGTTTTCTCA | 58.070 | 42.857 | 0.00 | 0.00 | 0.00 | 3.27 |
155 | 156 | 3.988379 | TTCACCACTGCATGTTTTCTC | 57.012 | 42.857 | 0.00 | 0.00 | 0.00 | 2.87 |
156 | 157 | 3.491447 | GCTTTCACCACTGCATGTTTTCT | 60.491 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
157 | 158 | 2.796593 | GCTTTCACCACTGCATGTTTTC | 59.203 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
158 | 159 | 2.168106 | TGCTTTCACCACTGCATGTTTT | 59.832 | 40.909 | 0.00 | 0.00 | 0.00 | 2.43 |
159 | 160 | 1.755959 | TGCTTTCACCACTGCATGTTT | 59.244 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
160 | 161 | 1.401761 | TGCTTTCACCACTGCATGTT | 58.598 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
161 | 162 | 1.542915 | GATGCTTTCACCACTGCATGT | 59.457 | 47.619 | 3.98 | 0.00 | 44.80 | 3.21 |
162 | 163 | 1.542472 | TGATGCTTTCACCACTGCATG | 59.458 | 47.619 | 3.98 | 0.00 | 44.80 | 4.06 |
164 | 165 | 3.418022 | TGATGCTTTCACCACTGCA | 57.582 | 47.368 | 0.00 | 0.00 | 39.83 | 4.41 |
172 | 173 | 4.143543 | TCATTCTTGGTGTGATGCTTTCA | 58.856 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
173 | 174 | 4.771590 | TCATTCTTGGTGTGATGCTTTC | 57.228 | 40.909 | 0.00 | 0.00 | 0.00 | 2.62 |
174 | 175 | 5.291971 | GTTTCATTCTTGGTGTGATGCTTT | 58.708 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
175 | 176 | 4.557296 | CGTTTCATTCTTGGTGTGATGCTT | 60.557 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
176 | 177 | 3.058016 | CGTTTCATTCTTGGTGTGATGCT | 60.058 | 43.478 | 0.00 | 0.00 | 0.00 | 3.79 |
177 | 178 | 3.236816 | CGTTTCATTCTTGGTGTGATGC | 58.763 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
178 | 179 | 3.501828 | TCCGTTTCATTCTTGGTGTGATG | 59.498 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
179 | 180 | 3.750371 | TCCGTTTCATTCTTGGTGTGAT | 58.250 | 40.909 | 0.00 | 0.00 | 0.00 | 3.06 |
180 | 181 | 3.201353 | TCCGTTTCATTCTTGGTGTGA | 57.799 | 42.857 | 0.00 | 0.00 | 0.00 | 3.58 |
181 | 182 | 3.550030 | GGTTCCGTTTCATTCTTGGTGTG | 60.550 | 47.826 | 0.00 | 0.00 | 0.00 | 3.82 |
182 | 183 | 2.621526 | GGTTCCGTTTCATTCTTGGTGT | 59.378 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
183 | 184 | 2.350388 | CGGTTCCGTTTCATTCTTGGTG | 60.350 | 50.000 | 2.82 | 0.00 | 0.00 | 4.17 |
184 | 185 | 1.877443 | CGGTTCCGTTTCATTCTTGGT | 59.123 | 47.619 | 2.82 | 0.00 | 0.00 | 3.67 |
185 | 186 | 2.147958 | TCGGTTCCGTTTCATTCTTGG | 58.852 | 47.619 | 11.04 | 0.00 | 0.00 | 3.61 |
186 | 187 | 3.747193 | CATCGGTTCCGTTTCATTCTTG | 58.253 | 45.455 | 11.04 | 0.00 | 0.00 | 3.02 |
187 | 188 | 2.161609 | GCATCGGTTCCGTTTCATTCTT | 59.838 | 45.455 | 11.04 | 0.00 | 0.00 | 2.52 |
188 | 189 | 1.737793 | GCATCGGTTCCGTTTCATTCT | 59.262 | 47.619 | 11.04 | 0.00 | 0.00 | 2.40 |
189 | 190 | 1.466950 | TGCATCGGTTCCGTTTCATTC | 59.533 | 47.619 | 11.04 | 0.00 | 0.00 | 2.67 |
190 | 191 | 1.529226 | TGCATCGGTTCCGTTTCATT | 58.471 | 45.000 | 11.04 | 0.00 | 0.00 | 2.57 |
191 | 192 | 1.401552 | CATGCATCGGTTCCGTTTCAT | 59.598 | 47.619 | 11.04 | 6.41 | 0.00 | 2.57 |
192 | 193 | 0.801872 | CATGCATCGGTTCCGTTTCA | 59.198 | 50.000 | 11.04 | 4.32 | 0.00 | 2.69 |
193 | 194 | 0.098728 | CCATGCATCGGTTCCGTTTC | 59.901 | 55.000 | 11.04 | 0.00 | 0.00 | 2.78 |
194 | 195 | 1.312371 | CCCATGCATCGGTTCCGTTT | 61.312 | 55.000 | 11.04 | 0.00 | 0.00 | 3.60 |
195 | 196 | 1.748879 | CCCATGCATCGGTTCCGTT | 60.749 | 57.895 | 11.04 | 0.00 | 0.00 | 4.44 |
196 | 197 | 2.124736 | CCCATGCATCGGTTCCGT | 60.125 | 61.111 | 11.04 | 0.00 | 0.00 | 4.69 |
197 | 198 | 3.585990 | GCCCATGCATCGGTTCCG | 61.586 | 66.667 | 12.26 | 4.74 | 37.47 | 4.30 |
198 | 199 | 3.219198 | GGCCCATGCATCGGTTCC | 61.219 | 66.667 | 12.26 | 1.76 | 40.13 | 3.62 |
199 | 200 | 1.603236 | TTTGGCCCATGCATCGGTTC | 61.603 | 55.000 | 12.26 | 5.66 | 40.13 | 3.62 |
200 | 201 | 1.190833 | TTTTGGCCCATGCATCGGTT | 61.191 | 50.000 | 12.26 | 0.00 | 40.13 | 4.44 |
201 | 202 | 1.606885 | CTTTTGGCCCATGCATCGGT | 61.607 | 55.000 | 12.26 | 0.00 | 40.13 | 4.69 |
202 | 203 | 1.142314 | CTTTTGGCCCATGCATCGG | 59.858 | 57.895 | 5.89 | 5.89 | 40.13 | 4.18 |
203 | 204 | 0.101759 | CTCTTTTGGCCCATGCATCG | 59.898 | 55.000 | 0.00 | 0.00 | 40.13 | 3.84 |
204 | 205 | 1.188863 | ACTCTTTTGGCCCATGCATC | 58.811 | 50.000 | 0.00 | 0.00 | 40.13 | 3.91 |
205 | 206 | 2.530460 | TACTCTTTTGGCCCATGCAT | 57.470 | 45.000 | 0.00 | 0.00 | 40.13 | 3.96 |
206 | 207 | 2.170166 | CTTACTCTTTTGGCCCATGCA | 58.830 | 47.619 | 0.00 | 0.00 | 40.13 | 3.96 |
207 | 208 | 2.164422 | GTCTTACTCTTTTGGCCCATGC | 59.836 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
208 | 209 | 2.755103 | GGTCTTACTCTTTTGGCCCATG | 59.245 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
209 | 210 | 2.378547 | TGGTCTTACTCTTTTGGCCCAT | 59.621 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
210 | 211 | 1.777878 | TGGTCTTACTCTTTTGGCCCA | 59.222 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
211 | 212 | 2.224793 | ACTGGTCTTACTCTTTTGGCCC | 60.225 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
212 | 213 | 3.141767 | ACTGGTCTTACTCTTTTGGCC | 57.858 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
213 | 214 | 4.578928 | TGAAACTGGTCTTACTCTTTTGGC | 59.421 | 41.667 | 0.00 | 0.00 | 0.00 | 4.52 |
214 | 215 | 6.094881 | TGTTGAAACTGGTCTTACTCTTTTGG | 59.905 | 38.462 | 0.00 | 0.00 | 0.00 | 3.28 |
215 | 216 | 7.083875 | TGTTGAAACTGGTCTTACTCTTTTG | 57.916 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
216 | 217 | 7.696992 | TTGTTGAAACTGGTCTTACTCTTTT | 57.303 | 32.000 | 0.00 | 0.00 | 0.00 | 2.27 |
217 | 218 | 7.339466 | ACATTGTTGAAACTGGTCTTACTCTTT | 59.661 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
218 | 219 | 6.828785 | ACATTGTTGAAACTGGTCTTACTCTT | 59.171 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
219 | 220 | 6.260936 | CACATTGTTGAAACTGGTCTTACTCT | 59.739 | 38.462 | 0.00 | 0.00 | 0.00 | 3.24 |
220 | 221 | 6.260050 | TCACATTGTTGAAACTGGTCTTACTC | 59.740 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
221 | 222 | 6.038271 | GTCACATTGTTGAAACTGGTCTTACT | 59.962 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
222 | 223 | 6.199393 | GTCACATTGTTGAAACTGGTCTTAC | 58.801 | 40.000 | 0.00 | 0.00 | 0.00 | 2.34 |
223 | 224 | 5.007234 | CGTCACATTGTTGAAACTGGTCTTA | 59.993 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
224 | 225 | 4.201910 | CGTCACATTGTTGAAACTGGTCTT | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
225 | 226 | 3.312421 | CGTCACATTGTTGAAACTGGTCT | 59.688 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
226 | 227 | 3.311322 | TCGTCACATTGTTGAAACTGGTC | 59.689 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
227 | 228 | 3.275143 | TCGTCACATTGTTGAAACTGGT | 58.725 | 40.909 | 0.00 | 0.00 | 0.00 | 4.00 |
228 | 229 | 3.961477 | TCGTCACATTGTTGAAACTGG | 57.039 | 42.857 | 0.00 | 0.00 | 0.00 | 4.00 |
229 | 230 | 3.665409 | GCATCGTCACATTGTTGAAACTG | 59.335 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
230 | 231 | 3.565482 | AGCATCGTCACATTGTTGAAACT | 59.435 | 39.130 | 0.00 | 0.00 | 0.00 | 2.66 |
231 | 232 | 3.888934 | AGCATCGTCACATTGTTGAAAC | 58.111 | 40.909 | 0.00 | 0.00 | 0.00 | 2.78 |
232 | 233 | 4.566545 | AAGCATCGTCACATTGTTGAAA | 57.433 | 36.364 | 0.00 | 0.00 | 0.00 | 2.69 |
233 | 234 | 4.376920 | CGTAAGCATCGTCACATTGTTGAA | 60.377 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
234 | 235 | 3.122780 | CGTAAGCATCGTCACATTGTTGA | 59.877 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
235 | 236 | 3.120683 | ACGTAAGCATCGTCACATTGTTG | 60.121 | 43.478 | 0.00 | 0.00 | 45.62 | 3.33 |
236 | 237 | 3.064207 | ACGTAAGCATCGTCACATTGTT | 58.936 | 40.909 | 0.00 | 0.00 | 45.62 | 2.83 |
237 | 238 | 2.683968 | ACGTAAGCATCGTCACATTGT | 58.316 | 42.857 | 0.00 | 0.00 | 45.62 | 2.71 |
238 | 239 | 3.659735 | GAACGTAAGCATCGTCACATTG | 58.340 | 45.455 | 0.00 | 0.00 | 40.69 | 2.82 |
239 | 240 | 2.344441 | CGAACGTAAGCATCGTCACATT | 59.656 | 45.455 | 0.00 | 0.00 | 42.72 | 2.71 |
240 | 241 | 1.917955 | CGAACGTAAGCATCGTCACAT | 59.082 | 47.619 | 0.00 | 0.00 | 42.72 | 3.21 |
241 | 242 | 1.069091 | TCGAACGTAAGCATCGTCACA | 60.069 | 47.619 | 6.49 | 0.00 | 46.23 | 3.58 |
242 | 243 | 1.316735 | GTCGAACGTAAGCATCGTCAC | 59.683 | 52.381 | 6.49 | 0.00 | 46.23 | 3.67 |
243 | 244 | 1.069091 | TGTCGAACGTAAGCATCGTCA | 60.069 | 47.619 | 6.49 | 4.73 | 46.23 | 4.35 |
244 | 245 | 1.578023 | CTGTCGAACGTAAGCATCGTC | 59.422 | 52.381 | 6.49 | 2.26 | 46.23 | 4.20 |
245 | 246 | 1.198408 | TCTGTCGAACGTAAGCATCGT | 59.802 | 47.619 | 6.49 | 0.00 | 46.23 | 3.73 |
247 | 248 | 3.619751 | GTTCTGTCGAACGTAAGCATC | 57.380 | 47.619 | 0.00 | 0.00 | 40.05 | 3.91 |
263 | 264 | 6.149973 | CACATACACATCAACAGAATGGTTCT | 59.850 | 38.462 | 0.00 | 0.00 | 43.62 | 3.01 |
264 | 265 | 6.317088 | CACATACACATCAACAGAATGGTTC | 58.683 | 40.000 | 0.00 | 0.00 | 43.62 | 3.62 |
265 | 266 | 5.183713 | CCACATACACATCAACAGAATGGTT | 59.816 | 40.000 | 0.00 | 0.00 | 43.62 | 3.67 |
266 | 267 | 4.701651 | CCACATACACATCAACAGAATGGT | 59.298 | 41.667 | 0.00 | 0.00 | 43.62 | 3.55 |
267 | 268 | 4.943093 | TCCACATACACATCAACAGAATGG | 59.057 | 41.667 | 0.00 | 0.00 | 43.62 | 3.16 |
268 | 269 | 5.412286 | TGTCCACATACACATCAACAGAATG | 59.588 | 40.000 | 0.00 | 0.00 | 46.00 | 2.67 |
269 | 270 | 5.559770 | TGTCCACATACACATCAACAGAAT | 58.440 | 37.500 | 0.00 | 0.00 | 0.00 | 2.40 |
270 | 271 | 4.967036 | TGTCCACATACACATCAACAGAA | 58.033 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
271 | 272 | 4.615588 | TGTCCACATACACATCAACAGA | 57.384 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
272 | 273 | 4.437794 | GCATGTCCACATACACATCAACAG | 60.438 | 45.833 | 0.00 | 0.00 | 34.26 | 3.16 |
273 | 274 | 3.439825 | GCATGTCCACATACACATCAACA | 59.560 | 43.478 | 0.00 | 0.00 | 34.26 | 3.33 |
274 | 275 | 3.691118 | AGCATGTCCACATACACATCAAC | 59.309 | 43.478 | 0.00 | 0.00 | 34.26 | 3.18 |
275 | 276 | 3.954200 | AGCATGTCCACATACACATCAA | 58.046 | 40.909 | 0.00 | 0.00 | 34.26 | 2.57 |
276 | 277 | 3.632643 | AGCATGTCCACATACACATCA | 57.367 | 42.857 | 0.00 | 0.00 | 34.26 | 3.07 |
277 | 278 | 5.502382 | CGTTTAGCATGTCCACATACACATC | 60.502 | 44.000 | 0.00 | 0.00 | 34.26 | 3.06 |
278 | 279 | 4.332543 | CGTTTAGCATGTCCACATACACAT | 59.667 | 41.667 | 0.00 | 0.00 | 34.26 | 3.21 |
279 | 280 | 3.682377 | CGTTTAGCATGTCCACATACACA | 59.318 | 43.478 | 0.00 | 0.00 | 34.26 | 3.72 |
280 | 281 | 3.063452 | CCGTTTAGCATGTCCACATACAC | 59.937 | 47.826 | 0.00 | 0.00 | 34.26 | 2.90 |
281 | 282 | 3.266636 | CCGTTTAGCATGTCCACATACA | 58.733 | 45.455 | 0.00 | 0.00 | 34.26 | 2.29 |
282 | 283 | 3.063452 | CACCGTTTAGCATGTCCACATAC | 59.937 | 47.826 | 0.00 | 0.00 | 34.26 | 2.39 |
283 | 284 | 3.055747 | TCACCGTTTAGCATGTCCACATA | 60.056 | 43.478 | 0.00 | 0.00 | 34.26 | 2.29 |
284 | 285 | 2.083774 | CACCGTTTAGCATGTCCACAT | 58.916 | 47.619 | 0.00 | 0.00 | 36.96 | 3.21 |
285 | 286 | 1.070914 | TCACCGTTTAGCATGTCCACA | 59.929 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
286 | 287 | 1.732259 | CTCACCGTTTAGCATGTCCAC | 59.268 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
287 | 288 | 1.943968 | GCTCACCGTTTAGCATGTCCA | 60.944 | 52.381 | 0.00 | 0.00 | 38.63 | 4.02 |
288 | 289 | 0.727398 | GCTCACCGTTTAGCATGTCC | 59.273 | 55.000 | 0.00 | 0.00 | 38.63 | 4.02 |
289 | 290 | 0.370273 | CGCTCACCGTTTAGCATGTC | 59.630 | 55.000 | 0.00 | 0.00 | 38.70 | 3.06 |
290 | 291 | 0.037697 | TCGCTCACCGTTTAGCATGT | 60.038 | 50.000 | 0.00 | 0.00 | 38.70 | 3.21 |
291 | 292 | 1.258982 | GATCGCTCACCGTTTAGCATG | 59.741 | 52.381 | 0.00 | 0.00 | 38.70 | 4.06 |
292 | 293 | 1.571919 | GATCGCTCACCGTTTAGCAT | 58.428 | 50.000 | 0.00 | 0.00 | 38.70 | 3.79 |
293 | 294 | 0.459585 | GGATCGCTCACCGTTTAGCA | 60.460 | 55.000 | 0.00 | 0.00 | 38.70 | 3.49 |
294 | 295 | 1.152383 | GGGATCGCTCACCGTTTAGC | 61.152 | 60.000 | 1.84 | 0.00 | 38.35 | 3.09 |
295 | 296 | 0.174845 | TGGGATCGCTCACCGTTTAG | 59.825 | 55.000 | 11.46 | 0.00 | 38.35 | 1.85 |
296 | 297 | 0.609151 | TTGGGATCGCTCACCGTTTA | 59.391 | 50.000 | 11.46 | 0.00 | 38.35 | 2.01 |
297 | 298 | 0.673644 | CTTGGGATCGCTCACCGTTT | 60.674 | 55.000 | 11.46 | 0.00 | 38.35 | 3.60 |
298 | 299 | 1.079127 | CTTGGGATCGCTCACCGTT | 60.079 | 57.895 | 11.46 | 0.00 | 38.35 | 4.44 |
299 | 300 | 2.579201 | CTTGGGATCGCTCACCGT | 59.421 | 61.111 | 11.46 | 0.00 | 38.35 | 4.83 |
300 | 301 | 2.892425 | GCTTGGGATCGCTCACCG | 60.892 | 66.667 | 11.46 | 0.00 | 38.61 | 4.94 |
301 | 302 | 2.892425 | CGCTTGGGATCGCTCACC | 60.892 | 66.667 | 11.46 | 0.00 | 0.00 | 4.02 |
302 | 303 | 2.167861 | GTCGCTTGGGATCGCTCAC | 61.168 | 63.158 | 11.46 | 0.00 | 0.00 | 3.51 |
303 | 304 | 2.184322 | GTCGCTTGGGATCGCTCA | 59.816 | 61.111 | 11.46 | 0.00 | 0.00 | 4.26 |
304 | 305 | 1.880340 | CAGTCGCTTGGGATCGCTC | 60.880 | 63.158 | 11.46 | 0.00 | 0.00 | 5.03 |
305 | 306 | 1.888436 | TTCAGTCGCTTGGGATCGCT | 61.888 | 55.000 | 11.46 | 0.00 | 0.00 | 4.93 |
306 | 307 | 1.019278 | TTTCAGTCGCTTGGGATCGC | 61.019 | 55.000 | 2.14 | 2.14 | 0.00 | 4.58 |
307 | 308 | 1.438651 | TTTTCAGTCGCTTGGGATCG | 58.561 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
324 | 325 | 2.650322 | TCGCAACCTCAACTCCTTTTT | 58.350 | 42.857 | 0.00 | 0.00 | 0.00 | 1.94 |
325 | 326 | 2.341846 | TCGCAACCTCAACTCCTTTT | 57.658 | 45.000 | 0.00 | 0.00 | 0.00 | 2.27 |
326 | 327 | 2.568623 | ATCGCAACCTCAACTCCTTT | 57.431 | 45.000 | 0.00 | 0.00 | 0.00 | 3.11 |
327 | 328 | 2.567615 | AGTATCGCAACCTCAACTCCTT | 59.432 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
328 | 329 | 2.166664 | GAGTATCGCAACCTCAACTCCT | 59.833 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
329 | 330 | 2.541556 | GAGTATCGCAACCTCAACTCC | 58.458 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
394 | 395 | 8.103305 | ACAGTACAAAATCAGTATCATCAGGTT | 58.897 | 33.333 | 0.00 | 0.00 | 0.00 | 3.50 |
396 | 397 | 7.765819 | TCACAGTACAAAATCAGTATCATCAGG | 59.234 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
397 | 398 | 8.707938 | TCACAGTACAAAATCAGTATCATCAG | 57.292 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
398 | 399 | 9.671279 | ATTCACAGTACAAAATCAGTATCATCA | 57.329 | 29.630 | 0.00 | 0.00 | 0.00 | 3.07 |
399 | 400 | 9.926751 | CATTCACAGTACAAAATCAGTATCATC | 57.073 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
442 | 443 | 9.943163 | GATTTCTAATCTCTAATGCCAAACTTC | 57.057 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
443 | 444 | 9.692325 | AGATTTCTAATCTCTAATGCCAAACTT | 57.308 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
479 | 482 | 5.036117 | ACCTCAGTTCTTTTTACTCTGCA | 57.964 | 39.130 | 0.00 | 0.00 | 0.00 | 4.41 |
498 | 502 | 8.634444 | CAGCTTTCAGTAGATATGTACTAACCT | 58.366 | 37.037 | 11.90 | 0.00 | 31.73 | 3.50 |
503 | 507 | 6.127338 | TGTGCAGCTTTCAGTAGATATGTACT | 60.127 | 38.462 | 6.72 | 6.72 | 33.25 | 2.73 |
527 | 531 | 0.032540 | TGATGGTCGAGCGATGGATG | 59.967 | 55.000 | 10.46 | 0.00 | 0.00 | 3.51 |
549 | 553 | 6.480320 | CGGAAGCTATAGCACTTCAAAACTAT | 59.520 | 38.462 | 26.07 | 0.00 | 43.32 | 2.12 |
553 | 557 | 4.827692 | TCGGAAGCTATAGCACTTCAAAA | 58.172 | 39.130 | 26.07 | 8.62 | 43.32 | 2.44 |
557 | 561 | 4.244425 | TGATCGGAAGCTATAGCACTTC | 57.756 | 45.455 | 26.07 | 19.97 | 45.16 | 3.01 |
643 | 657 | 9.303537 | GTAGGCACTCTTATCTTACTTTAACTG | 57.696 | 37.037 | 0.00 | 0.00 | 41.75 | 3.16 |
650 | 664 | 8.716779 | ACTACTAGTAGGCACTCTTATCTTACT | 58.283 | 37.037 | 29.05 | 3.80 | 41.75 | 2.24 |
651 | 665 | 8.907222 | ACTACTAGTAGGCACTCTTATCTTAC | 57.093 | 38.462 | 29.05 | 0.00 | 41.75 | 2.34 |
658 | 672 | 9.917887 | TTCTTATTACTACTAGTAGGCACTCTT | 57.082 | 33.333 | 29.05 | 12.28 | 41.75 | 2.85 |
703 | 720 | 1.134699 | ACGACGTACCTCTCCGTATCA | 60.135 | 52.381 | 0.00 | 0.00 | 37.44 | 2.15 |
845 | 863 | 6.330278 | TGACTTATAACGACAGAACTGATGG | 58.670 | 40.000 | 8.87 | 0.39 | 0.00 | 3.51 |
904 | 923 | 0.616111 | TCCAAGGAGGGAGCAGAGAC | 60.616 | 60.000 | 0.00 | 0.00 | 38.24 | 3.36 |
909 | 928 | 1.045350 | CGAGATCCAAGGAGGGAGCA | 61.045 | 60.000 | 0.00 | 0.00 | 45.76 | 4.26 |
955 | 978 | 2.603560 | GTGGAGCATCTACGTAAAGTGC | 59.396 | 50.000 | 14.97 | 14.97 | 36.69 | 4.40 |
989 | 1012 | 2.035321 | GGTAGCTCCATCTGTGAGTAGC | 59.965 | 54.545 | 0.00 | 0.00 | 35.97 | 3.58 |
991 | 1014 | 3.671740 | AGGTAGCTCCATCTGTGAGTA | 57.328 | 47.619 | 0.00 | 0.00 | 39.02 | 2.59 |
994 | 1017 | 2.245028 | AGGTAGGTAGCTCCATCTGTGA | 59.755 | 50.000 | 0.00 | 0.00 | 39.02 | 3.58 |
995 | 1018 | 2.672098 | AGGTAGGTAGCTCCATCTGTG | 58.328 | 52.381 | 0.00 | 0.00 | 39.02 | 3.66 |
1043 | 1066 | 6.830324 | TGTATTGGATGAGAAAGAAATGGAGG | 59.170 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
1088 | 1111 | 3.944476 | GCTTGAGCTTGAGGAGGAA | 57.056 | 52.632 | 0.00 | 0.00 | 38.21 | 3.36 |
1119 | 1142 | 1.226323 | GTGGTCGATCTCCGTGTCG | 60.226 | 63.158 | 0.00 | 0.00 | 39.75 | 4.35 |
1127 | 1150 | 0.247736 | GAACAGCTGGTGGTCGATCT | 59.752 | 55.000 | 19.93 | 0.00 | 31.60 | 2.75 |
1147 | 1170 | 0.625849 | TCCATTGGGAAGGAGAAGGC | 59.374 | 55.000 | 2.09 | 0.00 | 41.32 | 4.35 |
1161 | 1184 | 1.142688 | AGGTGGAGGTGGCTTCCATT | 61.143 | 55.000 | 3.36 | 0.00 | 45.85 | 3.16 |
1216 | 1242 | 1.517257 | GCACCGTCACGATCTCCTG | 60.517 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
1272 | 1298 | 2.373735 | GCGTATCGCGTGAACTACTA | 57.626 | 50.000 | 5.77 | 0.00 | 44.55 | 1.82 |
1305 | 1331 | 4.215742 | CGCTTCCGCACCCCGATA | 62.216 | 66.667 | 0.00 | 0.00 | 40.02 | 2.92 |
1759 | 1797 | 1.340017 | GGAGCTGCTGGTTCACCATAA | 60.340 | 52.381 | 7.01 | 0.00 | 46.46 | 1.90 |
1999 | 2072 | 1.155889 | CGGCTTGCATGTAGTGTGAA | 58.844 | 50.000 | 1.14 | 0.00 | 0.00 | 3.18 |
2157 | 2231 | 6.320418 | GGGTTCAATTCGGTTATAAATCTGGT | 59.680 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
2355 | 2479 | 1.002257 | CCACACCTGCCATACTGCA | 60.002 | 57.895 | 0.00 | 0.00 | 39.37 | 4.41 |
2424 | 2548 | 1.220206 | CTGAAGACCTGCCATCGCT | 59.780 | 57.895 | 0.00 | 0.00 | 35.36 | 4.93 |
2580 | 2704 | 2.158957 | GGACACGGCCATAGAAATCTCA | 60.159 | 50.000 | 2.24 | 0.00 | 0.00 | 3.27 |
2660 | 2784 | 1.723542 | GCATAGTGAGAATCCATCGCG | 59.276 | 52.381 | 0.00 | 0.00 | 32.41 | 5.87 |
2669 | 2793 | 1.132453 | CGTCGGACAGCATAGTGAGAA | 59.868 | 52.381 | 9.10 | 0.00 | 0.00 | 2.87 |
2694 | 2818 | 2.972348 | AGTGACCTCCACCTTAGTTGA | 58.028 | 47.619 | 0.00 | 0.00 | 46.87 | 3.18 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.