Multiple sequence alignment - TraesCS4B01G311000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G311000 chr4B 100.000 2482 0 0 1 2482 601191009 601193490 0.000000e+00 4584
1 TraesCS4B01G311000 chr4B 89.247 186 16 4 2052 2237 420713696 420713515 1.920000e-56 230
2 TraesCS4B01G311000 chr4D 94.424 1632 61 10 850 2466 477006951 477008567 0.000000e+00 2483
3 TraesCS4B01G311000 chr4D 93.182 352 15 7 508 852 477006289 477006638 2.200000e-140 508
4 TraesCS4B01G311000 chr4D 86.076 316 27 10 160 464 476884483 476884792 8.560000e-85 324
5 TraesCS4B01G311000 chr4A 91.621 1289 78 15 928 2207 683769246 683770513 0.000000e+00 1755
6 TraesCS4B01G311000 chr4A 90.988 344 14 9 502 829 683768397 683768739 4.870000e-122 448
7 TraesCS4B01G311000 chr4A 88.172 186 18 3 2052 2237 688269069 688268888 4.160000e-53 219
8 TraesCS4B01G311000 chr1B 79.535 430 53 26 2052 2470 41251103 41250698 8.750000e-70 274
9 TraesCS4B01G311000 chr5B 96.226 159 6 0 1 159 258475330 258475488 6.810000e-66 261
10 TraesCS4B01G311000 chr5B 96.226 159 6 0 1 159 258502968 258503126 6.810000e-66 261
11 TraesCS4B01G311000 chr5B 95.597 159 7 0 1 159 258493784 258493942 3.170000e-64 255
12 TraesCS4B01G311000 chr5B 86.486 148 20 0 3 150 289271895 289271748 1.980000e-36 163
13 TraesCS4B01G311000 chr6B 78.554 415 56 22 2066 2470 677435279 677434888 2.470000e-60 243
14 TraesCS4B01G311000 chr6B 89.247 186 16 4 2052 2237 165278764 165278583 1.920000e-56 230
15 TraesCS4B01G311000 chr7D 92.453 159 12 0 1 159 419774859 419775017 6.910000e-56 228
16 TraesCS4B01G311000 chr7B 87.097 186 20 4 2052 2237 724776415 724776596 9.000000e-50 207
17 TraesCS4B01G311000 chr2D 88.957 163 18 0 3 165 584838601 584838439 4.190000e-48 202
18 TraesCS4B01G311000 chr5A 89.308 159 17 0 1 159 673034149 673034307 1.510000e-47 200


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G311000 chr4B 601191009 601193490 2481 False 4584.0 4584 100.0000 1 2482 1 chr4B.!!$F1 2481
1 TraesCS4B01G311000 chr4D 477006289 477008567 2278 False 1495.5 2483 93.8030 508 2466 2 chr4D.!!$F2 1958
2 TraesCS4B01G311000 chr4A 683768397 683770513 2116 False 1101.5 1755 91.3045 502 2207 2 chr4A.!!$F1 1705

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
242 243 0.025770 CATTACAACCCGCGCGTAAG 59.974 55.0 29.95 19.07 43.44 2.34 F
405 406 0.035056 CCCTCTTGCGAAGGGAACAT 60.035 55.0 11.51 0.00 45.50 2.71 F
1106 1531 0.116541 TCCCCCGATCTTATCCCCTC 59.883 60.0 0.00 0.00 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1229 1662 0.179073 ATGCGGACGGAAATCTGGAG 60.179 55.0 0.00 0.0 0.00 3.86 R
1418 1851 0.321122 GCTGCTGCTGGTAGTTGAGT 60.321 55.0 8.53 0.0 36.03 3.41 R
1935 2376 0.523072 ATGGACATTCAACAGCGCAC 59.477 50.0 11.47 0.0 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 2.702847 GGCCTAACCAAGTATGCCG 58.297 57.895 0.00 0.00 38.86 5.69
28 29 1.444917 GGCCTAACCAAGTATGCCGC 61.445 60.000 0.00 0.00 38.86 6.53
29 30 1.444917 GCCTAACCAAGTATGCCGCC 61.445 60.000 0.00 0.00 0.00 6.13
30 31 0.818040 CCTAACCAAGTATGCCGCCC 60.818 60.000 0.00 0.00 0.00 6.13
31 32 0.818040 CTAACCAAGTATGCCGCCCC 60.818 60.000 0.00 0.00 0.00 5.80
32 33 2.596553 TAACCAAGTATGCCGCCCCG 62.597 60.000 0.00 0.00 0.00 5.73
45 46 4.798682 CCCCGGCCCTCTACCAGT 62.799 72.222 0.00 0.00 0.00 4.00
46 47 2.281091 CCCGGCCCTCTACCAGTA 59.719 66.667 0.00 0.00 0.00 2.74
47 48 1.833049 CCCGGCCCTCTACCAGTAG 60.833 68.421 0.00 0.00 34.56 2.57
48 49 2.499827 CCGGCCCTCTACCAGTAGC 61.500 68.421 0.00 0.00 33.32 3.58
49 50 1.756950 CGGCCCTCTACCAGTAGCA 60.757 63.158 0.00 0.00 33.32 3.49
50 51 1.327690 CGGCCCTCTACCAGTAGCAA 61.328 60.000 0.00 0.00 33.32 3.91
51 52 0.909623 GGCCCTCTACCAGTAGCAAA 59.090 55.000 0.00 0.00 33.32 3.68
52 53 1.280998 GGCCCTCTACCAGTAGCAAAA 59.719 52.381 0.00 0.00 33.32 2.44
53 54 2.357075 GCCCTCTACCAGTAGCAAAAC 58.643 52.381 0.00 0.00 33.32 2.43
54 55 2.027100 GCCCTCTACCAGTAGCAAAACT 60.027 50.000 0.00 0.00 33.32 2.66
55 56 3.197116 GCCCTCTACCAGTAGCAAAACTA 59.803 47.826 0.00 0.00 33.32 2.24
56 57 4.680975 GCCCTCTACCAGTAGCAAAACTAG 60.681 50.000 0.00 0.00 33.32 2.57
57 58 4.434520 CCTCTACCAGTAGCAAAACTAGC 58.565 47.826 0.00 0.00 33.32 3.42
58 59 4.160626 CCTCTACCAGTAGCAAAACTAGCT 59.839 45.833 0.00 0.00 45.77 3.32
59 60 5.360144 CCTCTACCAGTAGCAAAACTAGCTA 59.640 44.000 0.00 0.00 43.25 3.32
60 61 6.127423 CCTCTACCAGTAGCAAAACTAGCTAA 60.127 42.308 0.00 0.00 45.30 3.09
61 62 7.235935 TCTACCAGTAGCAAAACTAGCTAAA 57.764 36.000 0.00 0.00 45.30 1.85
62 63 7.095270 TCTACCAGTAGCAAAACTAGCTAAAC 58.905 38.462 0.00 0.00 45.30 2.01
63 64 5.866207 ACCAGTAGCAAAACTAGCTAAACT 58.134 37.500 0.00 0.00 45.30 2.66
64 65 5.701290 ACCAGTAGCAAAACTAGCTAAACTG 59.299 40.000 9.85 9.85 45.30 3.16
65 66 5.701290 CCAGTAGCAAAACTAGCTAAACTGT 59.299 40.000 13.75 0.00 45.30 3.55
66 67 6.347725 CCAGTAGCAAAACTAGCTAAACTGTG 60.348 42.308 13.75 5.41 45.30 3.66
67 68 6.202954 CAGTAGCAAAACTAGCTAAACTGTGT 59.797 38.462 8.99 0.00 45.30 3.72
68 69 7.384115 CAGTAGCAAAACTAGCTAAACTGTGTA 59.616 37.037 8.99 0.00 45.30 2.90
69 70 6.541111 AGCAAAACTAGCTAAACTGTGTAC 57.459 37.500 0.00 0.00 41.32 2.90
70 71 6.289064 AGCAAAACTAGCTAAACTGTGTACT 58.711 36.000 0.00 0.00 41.32 2.73
71 72 6.766467 AGCAAAACTAGCTAAACTGTGTACTT 59.234 34.615 0.00 0.00 41.32 2.24
72 73 7.041984 AGCAAAACTAGCTAAACTGTGTACTTC 60.042 37.037 0.00 0.00 41.32 3.01
73 74 7.573627 CAAAACTAGCTAAACTGTGTACTTCC 58.426 38.462 0.00 0.00 0.00 3.46
74 75 6.667558 AACTAGCTAAACTGTGTACTTCCT 57.332 37.500 0.00 0.00 0.00 3.36
75 76 6.667558 ACTAGCTAAACTGTGTACTTCCTT 57.332 37.500 0.00 0.00 0.00 3.36
76 77 7.771927 ACTAGCTAAACTGTGTACTTCCTTA 57.228 36.000 0.00 0.00 0.00 2.69
77 78 8.363761 ACTAGCTAAACTGTGTACTTCCTTAT 57.636 34.615 0.00 0.00 0.00 1.73
78 79 8.813951 ACTAGCTAAACTGTGTACTTCCTTATT 58.186 33.333 0.00 0.00 0.00 1.40
79 80 7.907214 AGCTAAACTGTGTACTTCCTTATTG 57.093 36.000 0.00 0.00 0.00 1.90
80 81 6.879458 AGCTAAACTGTGTACTTCCTTATTGG 59.121 38.462 0.00 0.00 37.10 3.16
81 82 5.959618 AAACTGTGTACTTCCTTATTGGC 57.040 39.130 0.00 0.00 35.26 4.52
82 83 4.910458 ACTGTGTACTTCCTTATTGGCT 57.090 40.909 0.00 0.00 35.26 4.75
83 84 4.579869 ACTGTGTACTTCCTTATTGGCTG 58.420 43.478 0.00 0.00 35.26 4.85
84 85 3.343617 TGTGTACTTCCTTATTGGCTGC 58.656 45.455 0.00 0.00 35.26 5.25
85 86 3.244735 TGTGTACTTCCTTATTGGCTGCA 60.245 43.478 0.50 0.00 35.26 4.41
86 87 3.127030 GTGTACTTCCTTATTGGCTGCAC 59.873 47.826 0.50 0.00 35.26 4.57
87 88 1.453155 ACTTCCTTATTGGCTGCACG 58.547 50.000 0.50 0.00 35.26 5.34
88 89 1.003118 ACTTCCTTATTGGCTGCACGA 59.997 47.619 0.50 0.00 35.26 4.35
89 90 1.398390 CTTCCTTATTGGCTGCACGAC 59.602 52.381 0.50 0.00 35.26 4.34
90 91 0.392461 TCCTTATTGGCTGCACGACC 60.392 55.000 0.50 0.00 35.26 4.79
91 92 0.392998 CCTTATTGGCTGCACGACCT 60.393 55.000 0.50 0.00 0.00 3.85
92 93 1.453155 CTTATTGGCTGCACGACCTT 58.547 50.000 0.50 0.00 0.00 3.50
93 94 1.398390 CTTATTGGCTGCACGACCTTC 59.602 52.381 0.50 0.00 0.00 3.46
94 95 0.323302 TATTGGCTGCACGACCTTCA 59.677 50.000 0.50 0.00 0.00 3.02
95 96 0.537143 ATTGGCTGCACGACCTTCAA 60.537 50.000 0.50 0.00 0.00 2.69
96 97 0.749818 TTGGCTGCACGACCTTCAAA 60.750 50.000 0.50 0.00 0.00 2.69
97 98 0.749818 TGGCTGCACGACCTTCAAAA 60.750 50.000 0.50 0.00 0.00 2.44
98 99 0.040067 GGCTGCACGACCTTCAAAAG 60.040 55.000 0.50 0.00 0.00 2.27
99 100 0.663153 GCTGCACGACCTTCAAAAGT 59.337 50.000 0.00 0.00 0.00 2.66
100 101 1.871039 GCTGCACGACCTTCAAAAGTA 59.129 47.619 0.00 0.00 0.00 2.24
101 102 2.289547 GCTGCACGACCTTCAAAAGTAA 59.710 45.455 0.00 0.00 0.00 2.24
102 103 3.242936 GCTGCACGACCTTCAAAAGTAAA 60.243 43.478 0.00 0.00 0.00 2.01
103 104 4.279659 CTGCACGACCTTCAAAAGTAAAC 58.720 43.478 0.00 0.00 0.00 2.01
104 105 3.942748 TGCACGACCTTCAAAAGTAAACT 59.057 39.130 0.00 0.00 0.00 2.66
105 106 4.396790 TGCACGACCTTCAAAAGTAAACTT 59.603 37.500 0.00 0.00 37.91 2.66
106 107 5.585445 TGCACGACCTTCAAAAGTAAACTTA 59.415 36.000 0.00 0.00 34.61 2.24
107 108 5.905733 GCACGACCTTCAAAAGTAAACTTAC 59.094 40.000 0.00 0.00 34.61 2.34
108 109 6.457257 GCACGACCTTCAAAAGTAAACTTACA 60.457 38.462 2.63 0.00 36.12 2.41
109 110 7.465989 CACGACCTTCAAAAGTAAACTTACAA 58.534 34.615 2.63 0.00 36.12 2.41
110 111 7.964011 CACGACCTTCAAAAGTAAACTTACAAA 59.036 33.333 2.63 0.00 36.12 2.83
111 112 8.179615 ACGACCTTCAAAAGTAAACTTACAAAG 58.820 33.333 2.63 1.10 36.12 2.77
112 113 8.392612 CGACCTTCAAAAGTAAACTTACAAAGA 58.607 33.333 2.63 0.00 36.12 2.52
125 126 8.528917 AAACTTACAAAGAAAAACACTTGACC 57.471 30.769 0.00 0.00 0.00 4.02
126 127 6.319399 ACTTACAAAGAAAAACACTTGACCG 58.681 36.000 0.00 0.00 0.00 4.79
127 128 4.104696 ACAAAGAAAAACACTTGACCGG 57.895 40.909 0.00 0.00 0.00 5.28
128 129 3.119280 ACAAAGAAAAACACTTGACCGGG 60.119 43.478 6.32 0.00 0.00 5.73
129 130 2.430248 AGAAAAACACTTGACCGGGT 57.570 45.000 6.32 0.00 0.00 5.28
130 131 2.021457 AGAAAAACACTTGACCGGGTG 58.979 47.619 3.30 6.73 39.13 4.61
131 132 2.018515 GAAAAACACTTGACCGGGTGA 58.981 47.619 14.51 0.00 37.22 4.02
132 133 2.358322 AAAACACTTGACCGGGTGAT 57.642 45.000 14.51 0.85 37.22 3.06
133 134 3.495434 AAAACACTTGACCGGGTGATA 57.505 42.857 14.51 0.00 37.22 2.15
134 135 3.495434 AAACACTTGACCGGGTGATAA 57.505 42.857 14.51 0.00 37.22 1.75
135 136 3.713826 AACACTTGACCGGGTGATAAT 57.286 42.857 14.51 0.00 37.22 1.28
136 137 3.261981 ACACTTGACCGGGTGATAATC 57.738 47.619 14.51 0.00 37.22 1.75
137 138 2.838202 ACACTTGACCGGGTGATAATCT 59.162 45.455 14.51 0.00 37.22 2.40
138 139 3.118738 ACACTTGACCGGGTGATAATCTC 60.119 47.826 14.51 0.00 37.22 2.75
139 140 2.434702 ACTTGACCGGGTGATAATCTCC 59.565 50.000 3.30 0.00 0.00 3.71
140 141 1.420430 TGACCGGGTGATAATCTCCC 58.580 55.000 3.30 0.00 44.62 4.30
141 142 1.062428 TGACCGGGTGATAATCTCCCT 60.062 52.381 3.30 0.00 45.60 4.20
142 143 1.619332 GACCGGGTGATAATCTCCCTC 59.381 57.143 3.30 1.22 45.60 4.30
143 144 1.062428 ACCGGGTGATAATCTCCCTCA 60.062 52.381 6.32 0.00 45.60 3.86
144 145 1.344763 CCGGGTGATAATCTCCCTCAC 59.655 57.143 11.36 3.96 45.60 3.51
145 146 2.320781 CGGGTGATAATCTCCCTCACT 58.679 52.381 11.36 0.00 45.60 3.41
146 147 3.497332 CGGGTGATAATCTCCCTCACTA 58.503 50.000 11.36 0.00 45.60 2.74
147 148 4.090090 CGGGTGATAATCTCCCTCACTAT 58.910 47.826 11.36 0.00 45.60 2.12
148 149 4.528596 CGGGTGATAATCTCCCTCACTATT 59.471 45.833 11.36 0.00 45.60 1.73
149 150 5.567623 CGGGTGATAATCTCCCTCACTATTG 60.568 48.000 11.36 0.00 45.60 1.90
150 151 5.544176 GGGTGATAATCTCCCTCACTATTGA 59.456 44.000 6.75 0.00 44.65 2.57
151 152 6.043243 GGGTGATAATCTCCCTCACTATTGAA 59.957 42.308 6.75 0.00 44.65 2.69
152 153 6.931840 GGTGATAATCTCCCTCACTATTGAAC 59.068 42.308 0.00 0.00 39.36 3.18
153 154 6.931840 GTGATAATCTCCCTCACTATTGAACC 59.068 42.308 0.00 0.00 37.04 3.62
154 155 6.615316 TGATAATCTCCCTCACTATTGAACCA 59.385 38.462 0.00 0.00 0.00 3.67
155 156 5.983333 AATCTCCCTCACTATTGAACCAT 57.017 39.130 0.00 0.00 0.00 3.55
156 157 5.983333 ATCTCCCTCACTATTGAACCATT 57.017 39.130 0.00 0.00 0.00 3.16
157 158 5.359194 TCTCCCTCACTATTGAACCATTC 57.641 43.478 0.00 0.00 0.00 2.67
158 159 5.032846 TCTCCCTCACTATTGAACCATTCT 58.967 41.667 0.00 0.00 0.00 2.40
159 160 6.202331 TCTCCCTCACTATTGAACCATTCTA 58.798 40.000 0.00 0.00 0.00 2.10
160 161 6.672218 TCTCCCTCACTATTGAACCATTCTAA 59.328 38.462 0.00 0.00 0.00 2.10
161 162 6.650120 TCCCTCACTATTGAACCATTCTAAC 58.350 40.000 0.00 0.00 0.00 2.34
162 163 5.823045 CCCTCACTATTGAACCATTCTAACC 59.177 44.000 0.00 0.00 0.00 2.85
163 164 5.823045 CCTCACTATTGAACCATTCTAACCC 59.177 44.000 0.00 0.00 0.00 4.11
164 165 6.381498 TCACTATTGAACCATTCTAACCCA 57.619 37.500 0.00 0.00 0.00 4.51
165 166 6.414732 TCACTATTGAACCATTCTAACCCAG 58.585 40.000 0.00 0.00 0.00 4.45
166 167 6.214615 TCACTATTGAACCATTCTAACCCAGA 59.785 38.462 0.00 0.00 0.00 3.86
168 169 7.393234 CACTATTGAACCATTCTAACCCAGAAA 59.607 37.037 0.00 0.00 46.29 2.52
169 170 6.590234 ATTGAACCATTCTAACCCAGAAAC 57.410 37.500 0.00 0.00 46.29 2.78
170 171 5.055265 TGAACCATTCTAACCCAGAAACA 57.945 39.130 0.00 0.00 46.29 2.83
171 172 5.450453 TGAACCATTCTAACCCAGAAACAA 58.550 37.500 0.00 0.00 46.29 2.83
172 173 5.894393 TGAACCATTCTAACCCAGAAACAAA 59.106 36.000 0.00 0.00 46.29 2.83
173 174 6.553100 TGAACCATTCTAACCCAGAAACAAAT 59.447 34.615 0.00 0.00 46.29 2.32
174 175 7.726291 TGAACCATTCTAACCCAGAAACAAATA 59.274 33.333 0.00 0.00 46.29 1.40
175 176 8.485578 AACCATTCTAACCCAGAAACAAATAA 57.514 30.769 0.00 0.00 46.29 1.40
176 177 7.892609 ACCATTCTAACCCAGAAACAAATAAC 58.107 34.615 0.00 0.00 46.29 1.89
177 178 7.027161 CCATTCTAACCCAGAAACAAATAACG 58.973 38.462 0.00 0.00 46.29 3.18
178 179 6.563222 TTCTAACCCAGAAACAAATAACGG 57.437 37.500 0.00 0.00 40.40 4.44
179 180 3.653539 AACCCAGAAACAAATAACGGC 57.346 42.857 0.00 0.00 0.00 5.68
180 181 1.890489 ACCCAGAAACAAATAACGGCC 59.110 47.619 0.00 0.00 0.00 6.13
181 182 1.889829 CCCAGAAACAAATAACGGCCA 59.110 47.619 2.24 0.00 0.00 5.36
182 183 2.352323 CCCAGAAACAAATAACGGCCAC 60.352 50.000 2.24 0.00 0.00 5.01
183 184 2.294791 CCAGAAACAAATAACGGCCACA 59.705 45.455 2.24 0.00 0.00 4.17
184 185 3.243569 CCAGAAACAAATAACGGCCACAA 60.244 43.478 2.24 0.00 0.00 3.33
185 186 4.363999 CAGAAACAAATAACGGCCACAAA 58.636 39.130 2.24 0.00 0.00 2.83
186 187 4.208253 CAGAAACAAATAACGGCCACAAAC 59.792 41.667 2.24 0.00 0.00 2.93
187 188 4.098807 AGAAACAAATAACGGCCACAAACT 59.901 37.500 2.24 0.00 0.00 2.66
188 189 5.299782 AGAAACAAATAACGGCCACAAACTA 59.700 36.000 2.24 0.00 0.00 2.24
189 190 4.759516 ACAAATAACGGCCACAAACTAG 57.240 40.909 2.24 0.00 0.00 2.57
190 191 4.139038 ACAAATAACGGCCACAAACTAGT 58.861 39.130 2.24 0.00 0.00 2.57
191 192 5.307204 ACAAATAACGGCCACAAACTAGTA 58.693 37.500 2.24 0.00 0.00 1.82
192 193 5.410439 ACAAATAACGGCCACAAACTAGTAG 59.590 40.000 2.24 0.00 0.00 2.57
193 194 2.467566 AACGGCCACAAACTAGTAGG 57.532 50.000 2.24 0.00 0.00 3.18
194 195 0.611714 ACGGCCACAAACTAGTAGGG 59.388 55.000 2.24 0.00 0.00 3.53
195 196 0.743345 CGGCCACAAACTAGTAGGGC 60.743 60.000 15.05 15.05 41.10 5.19
196 197 0.743345 GGCCACAAACTAGTAGGGCG 60.743 60.000 16.20 2.78 42.24 6.13
197 198 0.248289 GCCACAAACTAGTAGGGCGA 59.752 55.000 10.15 0.00 0.00 5.54
198 199 1.739371 GCCACAAACTAGTAGGGCGAG 60.739 57.143 10.15 0.00 0.00 5.03
199 200 1.641577 CACAAACTAGTAGGGCGAGC 58.358 55.000 0.00 0.00 0.00 5.03
200 201 0.172803 ACAAACTAGTAGGGCGAGCG 59.827 55.000 0.00 0.00 0.00 5.03
201 202 0.454600 CAAACTAGTAGGGCGAGCGA 59.545 55.000 0.00 0.00 0.00 4.93
202 203 0.739561 AAACTAGTAGGGCGAGCGAG 59.260 55.000 0.00 0.00 0.00 5.03
203 204 1.726533 AACTAGTAGGGCGAGCGAGC 61.727 60.000 0.00 0.00 0.00 5.03
204 205 3.243274 CTAGTAGGGCGAGCGAGCG 62.243 68.421 0.00 0.00 38.18 5.03
205 206 3.745240 TAGTAGGGCGAGCGAGCGA 62.745 63.158 1.41 0.00 38.18 4.93
206 207 4.615834 GTAGGGCGAGCGAGCGAG 62.616 72.222 1.41 0.00 38.18 5.03
211 212 4.180946 GCGAGCGAGCGAGGAGAA 62.181 66.667 1.41 0.00 0.00 2.87
212 213 2.024022 CGAGCGAGCGAGGAGAAG 59.976 66.667 0.00 0.00 0.00 2.85
213 214 2.756025 CGAGCGAGCGAGGAGAAGT 61.756 63.158 0.00 0.00 0.00 3.01
214 215 1.226547 GAGCGAGCGAGGAGAAGTG 60.227 63.158 0.00 0.00 0.00 3.16
215 216 2.202676 GCGAGCGAGGAGAAGTGG 60.203 66.667 0.00 0.00 0.00 4.00
216 217 2.492090 CGAGCGAGGAGAAGTGGG 59.508 66.667 0.00 0.00 0.00 4.61
217 218 2.185608 GAGCGAGGAGAAGTGGGC 59.814 66.667 0.00 0.00 0.00 5.36
218 219 3.378399 GAGCGAGGAGAAGTGGGCC 62.378 68.421 0.00 0.00 0.00 5.80
219 220 4.821589 GCGAGGAGAAGTGGGCCG 62.822 72.222 0.00 0.00 0.00 6.13
220 221 4.148825 CGAGGAGAAGTGGGCCGG 62.149 72.222 0.00 0.00 0.00 6.13
221 222 3.003763 GAGGAGAAGTGGGCCGGT 61.004 66.667 1.90 0.00 0.00 5.28
222 223 2.529389 AGGAGAAGTGGGCCGGTT 60.529 61.111 1.90 0.00 0.00 4.44
223 224 2.046217 GGAGAAGTGGGCCGGTTC 60.046 66.667 1.90 9.17 0.00 3.62
224 225 2.747686 GAGAAGTGGGCCGGTTCA 59.252 61.111 17.27 0.00 0.00 3.18
225 226 1.299976 GAGAAGTGGGCCGGTTCAT 59.700 57.895 17.27 5.30 0.00 2.57
226 227 0.322546 GAGAAGTGGGCCGGTTCATT 60.323 55.000 17.27 0.00 0.00 2.57
227 228 0.988832 AGAAGTGGGCCGGTTCATTA 59.011 50.000 17.27 0.00 0.00 1.90
228 229 1.092348 GAAGTGGGCCGGTTCATTAC 58.908 55.000 1.90 0.00 0.00 1.89
229 230 0.402504 AAGTGGGCCGGTTCATTACA 59.597 50.000 1.90 0.00 0.00 2.41
230 231 0.402504 AGTGGGCCGGTTCATTACAA 59.597 50.000 1.90 0.00 0.00 2.41
231 232 0.524414 GTGGGCCGGTTCATTACAAC 59.476 55.000 1.90 0.00 0.00 3.32
232 233 0.609681 TGGGCCGGTTCATTACAACC 60.610 55.000 1.90 0.00 42.34 3.77
233 234 1.317431 GGGCCGGTTCATTACAACCC 61.317 60.000 1.90 0.00 42.75 4.11
234 235 1.650314 GGCCGGTTCATTACAACCCG 61.650 60.000 1.90 0.00 42.75 5.28
235 236 1.798087 CCGGTTCATTACAACCCGC 59.202 57.895 0.00 0.00 42.75 6.13
236 237 1.422269 CGGTTCATTACAACCCGCG 59.578 57.895 0.00 0.00 42.75 6.46
237 238 1.135939 GGTTCATTACAACCCGCGC 59.864 57.895 0.00 0.00 40.18 6.86
238 239 1.225908 GTTCATTACAACCCGCGCG 60.226 57.895 25.67 25.67 0.00 6.86
239 240 1.668472 TTCATTACAACCCGCGCGT 60.668 52.632 29.95 12.50 0.00 6.01
240 241 0.389556 TTCATTACAACCCGCGCGTA 60.390 50.000 29.95 11.32 0.00 4.42
241 242 0.389556 TCATTACAACCCGCGCGTAA 60.390 50.000 29.95 19.81 0.00 3.18
242 243 0.025770 CATTACAACCCGCGCGTAAG 59.974 55.000 29.95 19.07 43.44 2.34
243 244 0.108709 ATTACAACCCGCGCGTAAGA 60.109 50.000 29.95 7.95 43.02 2.10
244 245 0.319383 TTACAACCCGCGCGTAAGAA 60.319 50.000 29.95 11.76 43.02 2.52
245 246 1.008361 TACAACCCGCGCGTAAGAAC 61.008 55.000 29.95 0.00 43.02 3.01
246 247 2.739671 AACCCGCGCGTAAGAACC 60.740 61.111 29.95 0.00 43.02 3.62
247 248 3.230522 AACCCGCGCGTAAGAACCT 62.231 57.895 29.95 0.59 43.02 3.50
248 249 2.433664 CCCGCGCGTAAGAACCTT 60.434 61.111 29.95 0.00 43.02 3.50
249 250 2.450345 CCCGCGCGTAAGAACCTTC 61.450 63.158 29.95 0.00 43.02 3.46
250 251 1.735198 CCGCGCGTAAGAACCTTCA 60.735 57.895 29.95 0.00 43.02 3.02
251 252 1.082117 CCGCGCGTAAGAACCTTCAT 61.082 55.000 29.95 0.00 43.02 2.57
252 253 0.719465 CGCGCGTAAGAACCTTCATT 59.281 50.000 24.19 0.00 43.02 2.57
253 254 1.526986 CGCGCGTAAGAACCTTCATTG 60.527 52.381 24.19 0.00 43.02 2.82
254 255 1.730064 GCGCGTAAGAACCTTCATTGA 59.270 47.619 8.43 0.00 43.02 2.57
255 256 2.351726 GCGCGTAAGAACCTTCATTGAT 59.648 45.455 8.43 0.00 43.02 2.57
256 257 3.554324 GCGCGTAAGAACCTTCATTGATA 59.446 43.478 8.43 0.00 43.02 2.15
257 258 4.550255 GCGCGTAAGAACCTTCATTGATAC 60.550 45.833 8.43 0.00 43.02 2.24
258 259 4.317139 CGCGTAAGAACCTTCATTGATACG 60.317 45.833 0.00 8.60 43.02 3.06
259 260 4.025979 GCGTAAGAACCTTCATTGATACGG 60.026 45.833 12.85 5.97 43.02 4.02
260 261 5.345702 CGTAAGAACCTTCATTGATACGGA 58.654 41.667 6.04 0.00 43.02 4.69
261 262 5.983720 CGTAAGAACCTTCATTGATACGGAT 59.016 40.000 6.04 0.00 43.02 4.18
262 263 6.074302 CGTAAGAACCTTCATTGATACGGATG 60.074 42.308 0.00 0.00 43.02 3.51
263 264 4.708177 AGAACCTTCATTGATACGGATGG 58.292 43.478 0.00 0.00 33.42 3.51
264 265 4.408921 AGAACCTTCATTGATACGGATGGA 59.591 41.667 0.00 0.00 32.06 3.41
265 266 4.342862 ACCTTCATTGATACGGATGGAG 57.657 45.455 0.00 0.00 32.06 3.86
266 267 3.668447 CCTTCATTGATACGGATGGAGG 58.332 50.000 0.00 0.00 41.42 4.30
267 268 4.607293 CTTCATTGATACGGATGGAGGA 57.393 45.455 0.00 0.00 0.00 3.71
268 269 4.310769 CTTCATTGATACGGATGGAGGAC 58.689 47.826 0.00 0.00 0.00 3.85
269 270 3.576861 TCATTGATACGGATGGAGGACT 58.423 45.455 0.00 0.00 0.00 3.85
270 271 3.574396 TCATTGATACGGATGGAGGACTC 59.426 47.826 0.00 0.00 0.00 3.36
271 272 1.605753 TGATACGGATGGAGGACTCG 58.394 55.000 0.00 0.00 0.00 4.18
272 273 0.241481 GATACGGATGGAGGACTCGC 59.759 60.000 0.00 0.00 0.00 5.03
273 274 0.467474 ATACGGATGGAGGACTCGCA 60.467 55.000 0.00 0.00 0.00 5.10
274 275 1.381928 TACGGATGGAGGACTCGCAC 61.382 60.000 0.00 0.00 0.00 5.34
275 276 2.418910 CGGATGGAGGACTCGCACT 61.419 63.158 0.00 0.00 0.00 4.40
276 277 1.101635 CGGATGGAGGACTCGCACTA 61.102 60.000 0.00 0.00 0.00 2.74
277 278 1.112113 GGATGGAGGACTCGCACTAA 58.888 55.000 0.00 0.00 0.00 2.24
278 279 1.067821 GGATGGAGGACTCGCACTAAG 59.932 57.143 0.00 0.00 0.00 2.18
279 280 0.461961 ATGGAGGACTCGCACTAAGC 59.538 55.000 0.00 0.00 40.87 3.09
293 294 4.477780 GCACTAAGCGAGATATAGTCACC 58.522 47.826 0.00 0.00 0.00 4.02
294 295 4.713806 CACTAAGCGAGATATAGTCACCG 58.286 47.826 0.00 0.00 0.00 4.94
295 296 2.708386 AAGCGAGATATAGTCACCGC 57.292 50.000 0.00 0.00 45.32 5.68
296 297 3.002990 GCGAGATATAGTCACCGCG 57.997 57.895 0.00 0.00 39.82 6.46
297 298 1.066114 GCGAGATATAGTCACCGCGC 61.066 60.000 0.00 0.00 39.82 6.86
298 299 0.454620 CGAGATATAGTCACCGCGCC 60.455 60.000 0.00 0.00 0.00 6.53
299 300 0.454620 GAGATATAGTCACCGCGCCG 60.455 60.000 0.00 0.00 0.00 6.46
300 301 1.170919 AGATATAGTCACCGCGCCGT 61.171 55.000 0.00 0.00 0.00 5.68
301 302 0.318445 GATATAGTCACCGCGCCGTT 60.318 55.000 0.00 0.00 0.00 4.44
302 303 0.103572 ATATAGTCACCGCGCCGTTT 59.896 50.000 0.00 0.00 0.00 3.60
303 304 0.526096 TATAGTCACCGCGCCGTTTC 60.526 55.000 0.00 0.00 0.00 2.78
304 305 2.221906 ATAGTCACCGCGCCGTTTCT 62.222 55.000 0.00 4.90 0.00 2.52
305 306 2.807631 TAGTCACCGCGCCGTTTCTC 62.808 60.000 0.00 0.00 0.00 2.87
308 309 4.736896 ACCGCGCCGTTTCTCCTC 62.737 66.667 0.00 0.00 0.00 3.71
309 310 4.735132 CCGCGCCGTTTCTCCTCA 62.735 66.667 0.00 0.00 0.00 3.86
310 311 3.479269 CGCGCCGTTTCTCCTCAC 61.479 66.667 0.00 0.00 0.00 3.51
311 312 3.119096 GCGCCGTTTCTCCTCACC 61.119 66.667 0.00 0.00 0.00 4.02
312 313 2.809601 CGCCGTTTCTCCTCACCG 60.810 66.667 0.00 0.00 0.00 4.94
313 314 2.654877 GCCGTTTCTCCTCACCGA 59.345 61.111 0.00 0.00 0.00 4.69
314 315 1.218316 GCCGTTTCTCCTCACCGAT 59.782 57.895 0.00 0.00 0.00 4.18
315 316 0.806492 GCCGTTTCTCCTCACCGATC 60.806 60.000 0.00 0.00 0.00 3.69
316 317 0.530744 CCGTTTCTCCTCACCGATCA 59.469 55.000 0.00 0.00 0.00 2.92
317 318 1.067142 CCGTTTCTCCTCACCGATCAA 60.067 52.381 0.00 0.00 0.00 2.57
318 319 2.611971 CCGTTTCTCCTCACCGATCAAA 60.612 50.000 0.00 0.00 0.00 2.69
319 320 3.064207 CGTTTCTCCTCACCGATCAAAA 58.936 45.455 0.00 0.00 0.00 2.44
320 321 3.120649 CGTTTCTCCTCACCGATCAAAAC 60.121 47.826 0.00 0.00 0.00 2.43
321 322 2.762535 TCTCCTCACCGATCAAAACC 57.237 50.000 0.00 0.00 0.00 3.27
322 323 2.257207 TCTCCTCACCGATCAAAACCT 58.743 47.619 0.00 0.00 0.00 3.50
323 324 3.437213 TCTCCTCACCGATCAAAACCTA 58.563 45.455 0.00 0.00 0.00 3.08
324 325 4.030913 TCTCCTCACCGATCAAAACCTAT 58.969 43.478 0.00 0.00 0.00 2.57
325 326 4.099573 TCTCCTCACCGATCAAAACCTATC 59.900 45.833 0.00 0.00 0.00 2.08
326 327 4.030913 TCCTCACCGATCAAAACCTATCT 58.969 43.478 0.00 0.00 0.00 1.98
327 328 4.122776 CCTCACCGATCAAAACCTATCTG 58.877 47.826 0.00 0.00 0.00 2.90
328 329 4.122776 CTCACCGATCAAAACCTATCTGG 58.877 47.826 0.00 0.00 42.93 3.86
329 330 3.118408 TCACCGATCAAAACCTATCTGGG 60.118 47.826 0.00 0.00 41.11 4.45
330 331 2.844348 ACCGATCAAAACCTATCTGGGT 59.156 45.455 0.00 0.00 42.05 4.51
331 332 3.118371 ACCGATCAAAACCTATCTGGGTC 60.118 47.826 0.00 0.00 38.87 4.46
332 333 3.118408 CCGATCAAAACCTATCTGGGTCA 60.118 47.826 0.00 0.00 38.87 4.02
333 334 4.444876 CCGATCAAAACCTATCTGGGTCAT 60.445 45.833 0.00 0.00 38.87 3.06
334 335 4.752101 CGATCAAAACCTATCTGGGTCATC 59.248 45.833 0.00 0.00 38.87 2.92
335 336 5.453903 CGATCAAAACCTATCTGGGTCATCT 60.454 44.000 0.00 0.00 38.87 2.90
336 337 6.239317 CGATCAAAACCTATCTGGGTCATCTA 60.239 42.308 0.00 0.00 38.87 1.98
337 338 6.884472 TCAAAACCTATCTGGGTCATCTAA 57.116 37.500 0.00 0.00 38.87 2.10
338 339 7.265599 TCAAAACCTATCTGGGTCATCTAAA 57.734 36.000 0.00 0.00 38.87 1.85
339 340 7.338710 TCAAAACCTATCTGGGTCATCTAAAG 58.661 38.462 0.00 0.00 38.87 1.85
340 341 7.182026 TCAAAACCTATCTGGGTCATCTAAAGA 59.818 37.037 0.00 0.00 38.87 2.52
341 342 7.510675 AAACCTATCTGGGTCATCTAAAGAA 57.489 36.000 0.00 0.00 38.87 2.52
342 343 6.739331 ACCTATCTGGGTCATCTAAAGAAG 57.261 41.667 0.00 0.00 41.11 2.85
343 344 5.604650 ACCTATCTGGGTCATCTAAAGAAGG 59.395 44.000 0.00 0.00 41.11 3.46
344 345 5.841237 CCTATCTGGGTCATCTAAAGAAGGA 59.159 44.000 0.00 0.00 0.00 3.36
345 346 6.500049 CCTATCTGGGTCATCTAAAGAAGGAT 59.500 42.308 0.00 0.00 0.00 3.24
346 347 5.878406 TCTGGGTCATCTAAAGAAGGATC 57.122 43.478 0.00 0.00 0.00 3.36
347 348 5.280499 TCTGGGTCATCTAAAGAAGGATCA 58.720 41.667 0.00 0.00 0.00 2.92
348 349 5.726308 TCTGGGTCATCTAAAGAAGGATCAA 59.274 40.000 0.00 0.00 0.00 2.57
349 350 6.215431 TCTGGGTCATCTAAAGAAGGATCAAA 59.785 38.462 0.00 0.00 0.00 2.69
350 351 6.973642 TGGGTCATCTAAAGAAGGATCAAAT 58.026 36.000 0.00 0.00 0.00 2.32
351 352 8.101309 TGGGTCATCTAAAGAAGGATCAAATA 57.899 34.615 0.00 0.00 0.00 1.40
352 353 8.727149 TGGGTCATCTAAAGAAGGATCAAATAT 58.273 33.333 0.00 0.00 0.00 1.28
353 354 9.579932 GGGTCATCTAAAGAAGGATCAAATATT 57.420 33.333 0.00 0.00 0.00 1.28
359 360 9.555727 TCTAAAGAAGGATCAAATATTTACCCG 57.444 33.333 0.00 0.00 0.00 5.28
360 361 7.582667 AAAGAAGGATCAAATATTTACCCGG 57.417 36.000 0.00 0.00 0.00 5.73
361 362 5.631119 AGAAGGATCAAATATTTACCCGGG 58.369 41.667 22.25 22.25 0.00 5.73
362 363 5.133830 AGAAGGATCAAATATTTACCCGGGT 59.866 40.000 32.66 32.66 0.00 5.28
363 364 6.330778 AGAAGGATCAAATATTTACCCGGGTA 59.669 38.462 30.02 30.02 0.00 3.69
364 365 6.713731 AGGATCAAATATTTACCCGGGTAT 57.286 37.500 33.58 23.17 0.00 2.73
365 366 7.098845 AGGATCAAATATTTACCCGGGTATT 57.901 36.000 33.58 22.64 0.00 1.89
366 367 7.532199 AGGATCAAATATTTACCCGGGTATTT 58.468 34.615 33.58 26.75 0.00 1.40
367 368 7.668469 AGGATCAAATATTTACCCGGGTATTTC 59.332 37.037 33.58 18.53 0.00 2.17
368 369 7.094075 GGATCAAATATTTACCCGGGTATTTCC 60.094 40.741 33.58 22.78 0.00 3.13
369 370 6.670617 TCAAATATTTACCCGGGTATTTCCA 58.329 36.000 33.58 16.18 38.11 3.53
370 371 7.124052 TCAAATATTTACCCGGGTATTTCCAA 58.876 34.615 33.58 23.74 38.11 3.53
371 372 7.785506 TCAAATATTTACCCGGGTATTTCCAAT 59.214 33.333 33.58 28.01 38.11 3.16
372 373 8.425703 CAAATATTTACCCGGGTATTTCCAATT 58.574 33.333 33.58 21.53 38.11 2.32
373 374 9.657728 AAATATTTACCCGGGTATTTCCAATTA 57.342 29.630 33.58 18.84 38.11 1.40
374 375 9.831682 AATATTTACCCGGGTATTTCCAATTAT 57.168 29.630 33.58 20.07 38.11 1.28
375 376 9.831682 ATATTTACCCGGGTATTTCCAATTATT 57.168 29.630 33.58 13.76 38.11 1.40
376 377 7.974730 TTTACCCGGGTATTTCCAATTATTT 57.025 32.000 33.58 4.07 38.11 1.40
377 378 7.974730 TTACCCGGGTATTTCCAATTATTTT 57.025 32.000 33.58 3.64 38.11 1.82
378 379 6.877668 ACCCGGGTATTTCCAATTATTTTT 57.122 33.333 29.13 0.00 38.11 1.94
395 396 1.238439 TTTTCTTCTGCCCTCTTGCG 58.762 50.000 0.00 0.00 0.00 4.85
396 397 0.396435 TTTCTTCTGCCCTCTTGCGA 59.604 50.000 0.00 0.00 0.00 5.10
397 398 0.396435 TTCTTCTGCCCTCTTGCGAA 59.604 50.000 0.00 0.00 0.00 4.70
398 399 0.036952 TCTTCTGCCCTCTTGCGAAG 60.037 55.000 0.00 0.00 40.22 3.79
399 400 1.003355 TTCTGCCCTCTTGCGAAGG 60.003 57.895 0.00 0.00 0.00 3.46
400 401 2.437359 CTGCCCTCTTGCGAAGGG 60.437 66.667 12.39 12.39 45.43 3.95
401 402 2.927856 TGCCCTCTTGCGAAGGGA 60.928 61.111 19.21 0.00 45.50 4.20
402 403 2.351276 GCCCTCTTGCGAAGGGAA 59.649 61.111 19.21 0.00 45.50 3.97
403 404 2.041115 GCCCTCTTGCGAAGGGAAC 61.041 63.158 19.21 1.82 45.50 3.62
404 405 1.374947 CCCTCTTGCGAAGGGAACA 59.625 57.895 11.51 0.00 45.50 3.18
405 406 0.035056 CCCTCTTGCGAAGGGAACAT 60.035 55.000 11.51 0.00 45.50 2.71
406 407 1.209504 CCCTCTTGCGAAGGGAACATA 59.790 52.381 11.51 0.00 45.50 2.29
407 408 2.158755 CCCTCTTGCGAAGGGAACATAT 60.159 50.000 11.51 0.00 45.50 1.78
408 409 3.134458 CCTCTTGCGAAGGGAACATATC 58.866 50.000 0.00 0.00 0.00 1.63
409 410 3.181461 CCTCTTGCGAAGGGAACATATCT 60.181 47.826 0.00 0.00 0.00 1.98
410 411 4.039245 CCTCTTGCGAAGGGAACATATCTA 59.961 45.833 0.00 0.00 0.00 1.98
411 412 5.279708 CCTCTTGCGAAGGGAACATATCTAT 60.280 44.000 0.00 0.00 0.00 1.98
412 413 6.174720 TCTTGCGAAGGGAACATATCTATT 57.825 37.500 0.00 0.00 0.00 1.73
413 414 6.591935 TCTTGCGAAGGGAACATATCTATTT 58.408 36.000 0.00 0.00 0.00 1.40
414 415 7.054124 TCTTGCGAAGGGAACATATCTATTTT 58.946 34.615 0.00 0.00 0.00 1.82
415 416 6.861065 TGCGAAGGGAACATATCTATTTTC 57.139 37.500 0.00 0.00 0.00 2.29
416 417 6.353323 TGCGAAGGGAACATATCTATTTTCA 58.647 36.000 0.00 0.00 0.00 2.69
417 418 6.260050 TGCGAAGGGAACATATCTATTTTCAC 59.740 38.462 0.00 0.00 0.00 3.18
418 419 6.293462 GCGAAGGGAACATATCTATTTTCACC 60.293 42.308 0.00 0.00 28.46 4.02
419 420 6.765989 CGAAGGGAACATATCTATTTTCACCA 59.234 38.462 0.00 0.00 28.46 4.17
420 421 7.282224 CGAAGGGAACATATCTATTTTCACCAA 59.718 37.037 0.00 0.00 28.46 3.67
421 422 8.525290 AAGGGAACATATCTATTTTCACCAAG 57.475 34.615 0.00 0.00 28.46 3.61
422 423 7.643123 AGGGAACATATCTATTTTCACCAAGT 58.357 34.615 0.00 0.00 28.46 3.16
423 424 7.775561 AGGGAACATATCTATTTTCACCAAGTC 59.224 37.037 0.00 0.00 28.46 3.01
424 425 7.013369 GGGAACATATCTATTTTCACCAAGTCC 59.987 40.741 0.00 0.00 0.00 3.85
425 426 7.254795 GGAACATATCTATTTTCACCAAGTCCG 60.255 40.741 0.00 0.00 0.00 4.79
426 427 6.884832 ACATATCTATTTTCACCAAGTCCGA 58.115 36.000 0.00 0.00 0.00 4.55
427 428 6.761714 ACATATCTATTTTCACCAAGTCCGAC 59.238 38.462 0.00 0.00 0.00 4.79
428 429 4.610605 TCTATTTTCACCAAGTCCGACA 57.389 40.909 0.40 0.00 0.00 4.35
429 430 5.160607 TCTATTTTCACCAAGTCCGACAT 57.839 39.130 0.40 0.00 0.00 3.06
430 431 4.935205 TCTATTTTCACCAAGTCCGACATG 59.065 41.667 0.40 0.00 0.00 3.21
431 432 2.631160 TTTCACCAAGTCCGACATGT 57.369 45.000 0.00 0.00 0.00 3.21
432 433 1.877637 TTCACCAAGTCCGACATGTG 58.122 50.000 1.15 5.21 0.00 3.21
433 434 1.044611 TCACCAAGTCCGACATGTGA 58.955 50.000 1.15 11.53 0.00 3.58
434 435 1.414550 TCACCAAGTCCGACATGTGAA 59.585 47.619 1.15 0.00 0.00 3.18
435 436 2.158885 TCACCAAGTCCGACATGTGAAA 60.159 45.455 1.15 0.00 0.00 2.69
436 437 2.616376 CACCAAGTCCGACATGTGAAAA 59.384 45.455 1.15 0.00 0.00 2.29
437 438 3.066064 CACCAAGTCCGACATGTGAAAAA 59.934 43.478 1.15 0.00 0.00 1.94
467 468 9.123902 TCCATCATACATTATGGAGTGAAAAAG 57.876 33.333 1.69 0.00 45.28 2.27
468 469 9.123902 CCATCATACATTATGGAGTGAAAAAGA 57.876 33.333 0.00 0.00 44.62 2.52
471 472 8.623903 TCATACATTATGGAGTGAAAAAGATGC 58.376 33.333 0.00 0.00 36.81 3.91
472 473 6.212888 ACATTATGGAGTGAAAAAGATGCC 57.787 37.500 0.00 0.00 0.00 4.40
473 474 4.963276 TTATGGAGTGAAAAAGATGCCG 57.037 40.909 0.00 0.00 0.00 5.69
474 475 2.270352 TGGAGTGAAAAAGATGCCGT 57.730 45.000 0.00 0.00 0.00 5.68
475 476 3.410631 TGGAGTGAAAAAGATGCCGTA 57.589 42.857 0.00 0.00 0.00 4.02
476 477 3.950397 TGGAGTGAAAAAGATGCCGTAT 58.050 40.909 0.00 0.00 0.00 3.06
477 478 3.689161 TGGAGTGAAAAAGATGCCGTATG 59.311 43.478 0.00 0.00 0.00 2.39
478 479 3.689649 GGAGTGAAAAAGATGCCGTATGT 59.310 43.478 0.00 0.00 0.00 2.29
479 480 4.201822 GGAGTGAAAAAGATGCCGTATGTC 60.202 45.833 0.00 0.00 0.00 3.06
480 481 4.323417 AGTGAAAAAGATGCCGTATGTCA 58.677 39.130 0.00 0.00 0.00 3.58
481 482 4.759693 AGTGAAAAAGATGCCGTATGTCAA 59.240 37.500 0.00 0.00 0.00 3.18
482 483 4.851558 GTGAAAAAGATGCCGTATGTCAAC 59.148 41.667 0.00 0.00 0.00 3.18
483 484 4.759693 TGAAAAAGATGCCGTATGTCAACT 59.240 37.500 0.00 0.00 0.00 3.16
484 485 5.935206 TGAAAAAGATGCCGTATGTCAACTA 59.065 36.000 0.00 0.00 0.00 2.24
485 486 5.796350 AAAAGATGCCGTATGTCAACTAC 57.204 39.130 0.00 0.00 0.00 2.73
486 487 3.079960 AGATGCCGTATGTCAACTACG 57.920 47.619 0.00 0.00 41.17 3.51
487 488 2.426024 AGATGCCGTATGTCAACTACGT 59.574 45.455 0.00 0.00 40.17 3.57
488 489 3.628942 AGATGCCGTATGTCAACTACGTA 59.371 43.478 0.00 0.00 40.17 3.57
489 490 3.135414 TGCCGTATGTCAACTACGTAC 57.865 47.619 5.53 0.00 44.11 3.67
490 491 2.749076 TGCCGTATGTCAACTACGTACT 59.251 45.455 5.53 0.00 44.99 2.73
491 492 3.938334 TGCCGTATGTCAACTACGTACTA 59.062 43.478 5.53 0.00 44.99 1.82
492 493 4.201812 TGCCGTATGTCAACTACGTACTAC 60.202 45.833 5.53 0.00 44.99 2.73
493 494 4.201812 GCCGTATGTCAACTACGTACTACA 60.202 45.833 5.53 0.00 44.99 2.74
494 495 5.673568 GCCGTATGTCAACTACGTACTACAA 60.674 44.000 5.53 0.00 44.99 2.41
495 496 6.314018 CCGTATGTCAACTACGTACTACAAA 58.686 40.000 5.53 0.00 44.99 2.83
496 497 6.249260 CCGTATGTCAACTACGTACTACAAAC 59.751 42.308 5.53 0.00 44.99 2.93
497 498 6.249260 CGTATGTCAACTACGTACTACAAACC 59.751 42.308 0.00 0.00 44.99 3.27
498 499 5.772825 TGTCAACTACGTACTACAAACCT 57.227 39.130 0.00 0.00 0.00 3.50
499 500 6.875948 TGTCAACTACGTACTACAAACCTA 57.124 37.500 0.00 0.00 0.00 3.08
500 501 7.452880 TGTCAACTACGTACTACAAACCTAT 57.547 36.000 0.00 0.00 0.00 2.57
504 505 6.690194 ACTACGTACTACAAACCTATCTGG 57.310 41.667 0.00 0.00 42.93 3.86
730 743 4.634991 GCTCCGTTTTAAATAGACACACG 58.365 43.478 0.00 0.00 0.00 4.49
736 749 5.503498 GTTTTAAATAGACACACGCACACA 58.497 37.500 0.00 0.00 0.00 3.72
847 864 3.213402 CCTCTCCGCTCCGAGGTC 61.213 72.222 0.00 0.00 41.49 3.85
875 1207 4.564110 CCCCCTTCCCCGCGAATC 62.564 72.222 8.23 0.00 0.00 2.52
878 1210 4.564110 CCTTCCCCGCGAATCCCC 62.564 72.222 8.23 0.00 0.00 4.81
924 1344 3.012518 CTGTTGATTGATCTGGTGGTCC 58.987 50.000 0.00 0.00 0.00 4.46
970 1394 2.627699 GGGGATTTGTTCTTGTTGCAGA 59.372 45.455 0.00 0.00 0.00 4.26
991 1415 4.907034 TCGATCGAGAAGCGGCGC 62.907 66.667 26.86 26.86 41.33 6.53
1059 1483 2.485426 CACCTTCGAGTACAGGTTCGTA 59.515 50.000 3.70 0.00 40.85 3.43
1094 1519 2.203640 CCCGATCTCATCCCCCGA 60.204 66.667 0.00 0.00 0.00 5.14
1095 1520 1.610673 CCCGATCTCATCCCCCGAT 60.611 63.158 0.00 0.00 0.00 4.18
1096 1521 1.608717 CCCGATCTCATCCCCCGATC 61.609 65.000 0.00 0.00 0.00 3.69
1097 1522 0.613292 CCGATCTCATCCCCCGATCT 60.613 60.000 0.00 0.00 33.20 2.75
1098 1523 1.261480 CGATCTCATCCCCCGATCTT 58.739 55.000 0.00 0.00 33.20 2.40
1099 1524 2.447443 CGATCTCATCCCCCGATCTTA 58.553 52.381 0.00 0.00 33.20 2.10
1100 1525 3.027412 CGATCTCATCCCCCGATCTTAT 58.973 50.000 0.00 0.00 33.20 1.73
1101 1526 3.067461 CGATCTCATCCCCCGATCTTATC 59.933 52.174 0.00 0.00 33.20 1.75
1102 1527 2.821437 TCTCATCCCCCGATCTTATCC 58.179 52.381 0.00 0.00 0.00 2.59
1103 1528 1.834263 CTCATCCCCCGATCTTATCCC 59.166 57.143 0.00 0.00 0.00 3.85
1104 1529 0.912486 CATCCCCCGATCTTATCCCC 59.088 60.000 0.00 0.00 0.00 4.81
1105 1530 0.800239 ATCCCCCGATCTTATCCCCT 59.200 55.000 0.00 0.00 0.00 4.79
1106 1531 0.116541 TCCCCCGATCTTATCCCCTC 59.883 60.000 0.00 0.00 0.00 4.30
1107 1532 0.178903 CCCCCGATCTTATCCCCTCA 60.179 60.000 0.00 0.00 0.00 3.86
1114 1539 0.687757 TCTTATCCCCTCAGTGCGCT 60.688 55.000 9.73 0.00 0.00 5.92
1195 1628 3.121030 CCGGAAGTCGCCAAGCTG 61.121 66.667 0.00 0.00 37.59 4.24
1490 1923 4.856801 CCCAAGTGATCGGCCCCG 62.857 72.222 0.00 0.00 41.35 5.73
1720 2157 5.112129 TGCTGGTACTGTCTGTAGATCTA 57.888 43.478 0.00 0.00 0.00 1.98
1737 2174 6.159299 AGATCTACCTGTGATGATCTGTTG 57.841 41.667 0.00 0.00 42.52 3.33
1782 2219 7.745717 TGTTATCTGGTTCCTTATGATTAGGG 58.254 38.462 0.00 0.00 33.41 3.53
1801 2238 5.296151 AGGGGTATAGTGTTCATGTGATG 57.704 43.478 0.00 0.00 0.00 3.07
1883 2321 3.441572 CCAGACTAAAATGCACCTCCTTG 59.558 47.826 0.00 0.00 0.00 3.61
1903 2344 2.486203 TGCGTTTGGTACATCATCAACC 59.514 45.455 0.00 0.00 39.30 3.77
1935 2376 6.018262 TGTTAGTCTGAAGTCACATTTTTCGG 60.018 38.462 0.00 0.00 0.00 4.30
2057 2498 2.155279 GGAGGAACTTGCCTTGTCTTC 58.845 52.381 0.00 0.00 41.55 2.87
2115 2557 5.535043 TGCTATGCGATGCTGTTATAATG 57.465 39.130 0.00 0.00 0.00 1.90
2168 2610 3.437049 GTGATGTTGGTAGAACTTCCTGC 59.563 47.826 0.00 0.00 0.00 4.85
2199 2641 9.225682 TCTTGTTCCTCACCTTTAGGATTATAT 57.774 33.333 2.06 0.00 42.69 0.86
2247 2689 2.746362 GAGCAAATGGAACTCTGGACTG 59.254 50.000 0.00 0.00 0.00 3.51
2274 2717 5.664294 AGATTATCACAGGCAAAAATGCA 57.336 34.783 2.97 0.00 36.33 3.96
2276 2719 4.870123 TTATCACAGGCAAAAATGCACT 57.130 36.364 2.97 0.00 36.33 4.40
2305 2748 8.891985 TTTTGCATATTATATATCCTTGGCCA 57.108 30.769 0.00 0.00 0.00 5.36
2365 2808 7.285629 TGTTGAATGTCCAGTACCATTGTAAAA 59.714 33.333 0.51 0.00 31.67 1.52
2409 2852 5.355910 GTCACAGGAAGTAAAAACAACTGGA 59.644 40.000 0.00 0.00 0.00 3.86
2424 2867 3.567478 ACTGGAGTTCTGCAGAGTTTT 57.433 42.857 23.84 3.81 0.00 2.43
2466 2909 2.153645 TCACCATGCTGCTTTGTGTAG 58.846 47.619 15.97 0.00 0.00 2.74
2476 2919 4.935352 TGCTTTGTGTAGCATCCTTTTT 57.065 36.364 0.00 0.00 45.72 1.94
2477 2920 4.619973 TGCTTTGTGTAGCATCCTTTTTG 58.380 39.130 0.00 0.00 45.72 2.44
2478 2921 4.099266 TGCTTTGTGTAGCATCCTTTTTGT 59.901 37.500 0.00 0.00 45.72 2.83
2479 2922 5.049828 GCTTTGTGTAGCATCCTTTTTGTT 58.950 37.500 0.00 0.00 40.89 2.83
2480 2923 5.523552 GCTTTGTGTAGCATCCTTTTTGTTT 59.476 36.000 0.00 0.00 40.89 2.83
2481 2924 6.037062 GCTTTGTGTAGCATCCTTTTTGTTTT 59.963 34.615 0.00 0.00 40.89 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.444917 GCGGCATACTTGGTTAGGCC 61.445 60.000 0.00 0.00 38.04 5.19
10 11 1.444917 GGCGGCATACTTGGTTAGGC 61.445 60.000 3.07 0.00 0.00 3.93
11 12 0.818040 GGGCGGCATACTTGGTTAGG 60.818 60.000 12.47 0.00 0.00 2.69
12 13 0.818040 GGGGCGGCATACTTGGTTAG 60.818 60.000 12.47 0.00 0.00 2.34
13 14 1.225148 GGGGCGGCATACTTGGTTA 59.775 57.895 12.47 0.00 0.00 2.85
14 15 2.044352 GGGGCGGCATACTTGGTT 60.044 61.111 12.47 0.00 0.00 3.67
15 16 4.483243 CGGGGCGGCATACTTGGT 62.483 66.667 12.47 0.00 0.00 3.67
28 29 3.384555 TACTGGTAGAGGGCCGGGG 62.385 68.421 2.18 0.00 36.71 5.73
29 30 1.833049 CTACTGGTAGAGGGCCGGG 60.833 68.421 2.18 0.00 36.71 5.73
30 31 2.499827 GCTACTGGTAGAGGGCCGG 61.500 68.421 11.44 0.00 35.21 6.13
31 32 1.327690 TTGCTACTGGTAGAGGGCCG 61.328 60.000 11.44 0.00 35.21 6.13
32 33 0.909623 TTTGCTACTGGTAGAGGGCC 59.090 55.000 11.44 0.00 35.21 5.80
33 34 2.027100 AGTTTTGCTACTGGTAGAGGGC 60.027 50.000 11.44 0.00 35.21 5.19
34 35 3.983044 AGTTTTGCTACTGGTAGAGGG 57.017 47.619 11.44 0.00 35.21 4.30
35 36 4.160626 AGCTAGTTTTGCTACTGGTAGAGG 59.839 45.833 11.44 0.00 39.21 3.69
36 37 5.331876 AGCTAGTTTTGCTACTGGTAGAG 57.668 43.478 11.44 0.27 39.21 2.43
37 38 6.845758 TTAGCTAGTTTTGCTACTGGTAGA 57.154 37.500 11.44 0.00 41.95 2.59
38 39 7.063544 CAGTTTAGCTAGTTTTGCTACTGGTAG 59.936 40.741 9.50 3.62 40.57 3.18
39 40 6.872020 CAGTTTAGCTAGTTTTGCTACTGGTA 59.128 38.462 9.50 0.00 40.57 3.25
40 41 5.701290 CAGTTTAGCTAGTTTTGCTACTGGT 59.299 40.000 9.50 0.00 40.57 4.00
41 42 5.701290 ACAGTTTAGCTAGTTTTGCTACTGG 59.299 40.000 17.38 0.00 44.74 4.00
42 43 6.202954 ACACAGTTTAGCTAGTTTTGCTACTG 59.797 38.462 13.69 13.69 45.37 2.74
43 44 6.289064 ACACAGTTTAGCTAGTTTTGCTACT 58.711 36.000 0.00 0.00 41.95 2.57
44 45 6.541111 ACACAGTTTAGCTAGTTTTGCTAC 57.459 37.500 0.00 0.00 41.95 3.58
45 46 7.439381 AGTACACAGTTTAGCTAGTTTTGCTA 58.561 34.615 0.00 0.00 41.46 3.49
46 47 6.289064 AGTACACAGTTTAGCTAGTTTTGCT 58.711 36.000 0.00 0.00 43.79 3.91
47 48 6.541111 AGTACACAGTTTAGCTAGTTTTGC 57.459 37.500 0.00 0.00 0.00 3.68
48 49 7.441458 AGGAAGTACACAGTTTAGCTAGTTTTG 59.559 37.037 0.00 0.00 0.00 2.44
49 50 7.506971 AGGAAGTACACAGTTTAGCTAGTTTT 58.493 34.615 0.00 0.00 0.00 2.43
50 51 7.063934 AGGAAGTACACAGTTTAGCTAGTTT 57.936 36.000 0.00 0.00 0.00 2.66
51 52 6.667558 AGGAAGTACACAGTTTAGCTAGTT 57.332 37.500 0.00 0.00 0.00 2.24
52 53 6.667558 AAGGAAGTACACAGTTTAGCTAGT 57.332 37.500 0.00 0.00 0.00 2.57
53 54 9.088512 CAATAAGGAAGTACACAGTTTAGCTAG 57.911 37.037 0.00 0.00 0.00 3.42
54 55 8.038944 CCAATAAGGAAGTACACAGTTTAGCTA 58.961 37.037 0.00 0.00 41.22 3.32
55 56 6.879458 CCAATAAGGAAGTACACAGTTTAGCT 59.121 38.462 0.00 0.00 41.22 3.32
56 57 6.403309 GCCAATAAGGAAGTACACAGTTTAGC 60.403 42.308 0.00 0.00 41.22 3.09
57 58 6.879458 AGCCAATAAGGAAGTACACAGTTTAG 59.121 38.462 0.00 0.00 41.22 1.85
58 59 6.653320 CAGCCAATAAGGAAGTACACAGTTTA 59.347 38.462 0.00 0.00 41.22 2.01
59 60 5.473504 CAGCCAATAAGGAAGTACACAGTTT 59.526 40.000 0.00 0.00 41.22 2.66
60 61 5.003804 CAGCCAATAAGGAAGTACACAGTT 58.996 41.667 0.00 0.00 41.22 3.16
61 62 4.579869 CAGCCAATAAGGAAGTACACAGT 58.420 43.478 0.00 0.00 41.22 3.55
62 63 3.375299 GCAGCCAATAAGGAAGTACACAG 59.625 47.826 0.00 0.00 41.22 3.66
63 64 3.244735 TGCAGCCAATAAGGAAGTACACA 60.245 43.478 0.00 0.00 41.22 3.72
64 65 3.127030 GTGCAGCCAATAAGGAAGTACAC 59.873 47.826 0.00 0.00 41.22 2.90
65 66 3.343617 GTGCAGCCAATAAGGAAGTACA 58.656 45.455 0.00 0.00 41.22 2.90
66 67 2.351726 CGTGCAGCCAATAAGGAAGTAC 59.648 50.000 0.00 0.00 41.22 2.73
67 68 2.235155 TCGTGCAGCCAATAAGGAAGTA 59.765 45.455 0.00 0.00 41.22 2.24
68 69 1.003118 TCGTGCAGCCAATAAGGAAGT 59.997 47.619 0.00 0.00 41.22 3.01
69 70 1.398390 GTCGTGCAGCCAATAAGGAAG 59.602 52.381 0.00 0.00 41.22 3.46
70 71 1.448985 GTCGTGCAGCCAATAAGGAA 58.551 50.000 0.00 0.00 41.22 3.36
71 72 0.392461 GGTCGTGCAGCCAATAAGGA 60.392 55.000 0.00 0.00 41.22 3.36
72 73 0.392998 AGGTCGTGCAGCCAATAAGG 60.393 55.000 0.00 0.00 41.84 2.69
73 74 1.398390 GAAGGTCGTGCAGCCAATAAG 59.602 52.381 0.00 0.00 0.00 1.73
74 75 1.271108 TGAAGGTCGTGCAGCCAATAA 60.271 47.619 0.00 0.00 0.00 1.40
75 76 0.323302 TGAAGGTCGTGCAGCCAATA 59.677 50.000 0.00 0.00 0.00 1.90
76 77 0.537143 TTGAAGGTCGTGCAGCCAAT 60.537 50.000 0.00 0.00 0.00 3.16
77 78 0.749818 TTTGAAGGTCGTGCAGCCAA 60.750 50.000 0.00 0.00 0.00 4.52
78 79 0.749818 TTTTGAAGGTCGTGCAGCCA 60.750 50.000 0.00 0.00 0.00 4.75
79 80 0.040067 CTTTTGAAGGTCGTGCAGCC 60.040 55.000 0.00 0.00 0.00 4.85
80 81 0.663153 ACTTTTGAAGGTCGTGCAGC 59.337 50.000 0.00 0.00 0.00 5.25
81 82 4.035208 AGTTTACTTTTGAAGGTCGTGCAG 59.965 41.667 0.00 0.00 0.00 4.41
82 83 3.942748 AGTTTACTTTTGAAGGTCGTGCA 59.057 39.130 0.00 0.00 0.00 4.57
83 84 4.547406 AGTTTACTTTTGAAGGTCGTGC 57.453 40.909 0.00 0.00 0.00 5.34
84 85 7.007313 TGTAAGTTTACTTTTGAAGGTCGTG 57.993 36.000 0.00 0.00 37.40 4.35
85 86 7.614124 TTGTAAGTTTACTTTTGAAGGTCGT 57.386 32.000 0.00 0.00 37.40 4.34
86 87 8.392612 TCTTTGTAAGTTTACTTTTGAAGGTCG 58.607 33.333 0.00 0.00 37.40 4.79
99 100 9.628746 GGTCAAGTGTTTTTCTTTGTAAGTTTA 57.371 29.630 0.00 0.00 0.00 2.01
100 101 7.327518 CGGTCAAGTGTTTTTCTTTGTAAGTTT 59.672 33.333 0.00 0.00 0.00 2.66
101 102 6.804783 CGGTCAAGTGTTTTTCTTTGTAAGTT 59.195 34.615 0.00 0.00 0.00 2.66
102 103 6.319399 CGGTCAAGTGTTTTTCTTTGTAAGT 58.681 36.000 0.00 0.00 0.00 2.24
103 104 5.741982 CCGGTCAAGTGTTTTTCTTTGTAAG 59.258 40.000 0.00 0.00 0.00 2.34
104 105 5.393243 CCCGGTCAAGTGTTTTTCTTTGTAA 60.393 40.000 0.00 0.00 0.00 2.41
105 106 4.096682 CCCGGTCAAGTGTTTTTCTTTGTA 59.903 41.667 0.00 0.00 0.00 2.41
106 107 3.119280 CCCGGTCAAGTGTTTTTCTTTGT 60.119 43.478 0.00 0.00 0.00 2.83
107 108 3.119280 ACCCGGTCAAGTGTTTTTCTTTG 60.119 43.478 0.00 0.00 0.00 2.77
108 109 3.093814 ACCCGGTCAAGTGTTTTTCTTT 58.906 40.909 0.00 0.00 0.00 2.52
109 110 2.425668 CACCCGGTCAAGTGTTTTTCTT 59.574 45.455 0.00 0.00 0.00 2.52
110 111 2.021457 CACCCGGTCAAGTGTTTTTCT 58.979 47.619 0.00 0.00 0.00 2.52
111 112 2.018515 TCACCCGGTCAAGTGTTTTTC 58.981 47.619 0.00 0.00 35.45 2.29
112 113 2.131776 TCACCCGGTCAAGTGTTTTT 57.868 45.000 0.00 0.00 35.45 1.94
113 114 2.358322 ATCACCCGGTCAAGTGTTTT 57.642 45.000 0.00 0.00 35.45 2.43
114 115 3.495434 TTATCACCCGGTCAAGTGTTT 57.505 42.857 0.00 0.00 35.45 2.83
115 116 3.263425 AGATTATCACCCGGTCAAGTGTT 59.737 43.478 0.00 0.00 35.45 3.32
116 117 2.838202 AGATTATCACCCGGTCAAGTGT 59.162 45.455 0.00 0.00 35.45 3.55
117 118 3.458189 GAGATTATCACCCGGTCAAGTG 58.542 50.000 0.00 0.69 35.24 3.16
118 119 2.434702 GGAGATTATCACCCGGTCAAGT 59.565 50.000 0.00 0.00 0.00 3.16
119 120 2.224305 GGGAGATTATCACCCGGTCAAG 60.224 54.545 11.77 0.00 37.53 3.02
120 121 1.766496 GGGAGATTATCACCCGGTCAA 59.234 52.381 11.77 0.00 37.53 3.18
121 122 1.420430 GGGAGATTATCACCCGGTCA 58.580 55.000 11.77 0.00 37.53 4.02
126 127 5.544176 TCAATAGTGAGGGAGATTATCACCC 59.456 44.000 18.19 18.19 46.19 4.61
127 128 6.672266 TCAATAGTGAGGGAGATTATCACC 57.328 41.667 0.00 0.00 43.47 4.02
128 129 6.931840 GGTTCAATAGTGAGGGAGATTATCAC 59.068 42.308 0.00 0.00 42.91 3.06
129 130 6.615316 TGGTTCAATAGTGAGGGAGATTATCA 59.385 38.462 0.00 0.00 34.49 2.15
130 131 7.067496 TGGTTCAATAGTGAGGGAGATTATC 57.933 40.000 0.00 0.00 34.49 1.75
131 132 7.639062 ATGGTTCAATAGTGAGGGAGATTAT 57.361 36.000 0.00 0.00 34.49 1.28
132 133 7.348274 AGAATGGTTCAATAGTGAGGGAGATTA 59.652 37.037 0.00 0.00 34.49 1.75
133 134 5.983333 ATGGTTCAATAGTGAGGGAGATT 57.017 39.130 0.00 0.00 34.49 2.40
134 135 5.669447 AGAATGGTTCAATAGTGAGGGAGAT 59.331 40.000 0.00 0.00 34.49 2.75
135 136 5.032846 AGAATGGTTCAATAGTGAGGGAGA 58.967 41.667 0.00 0.00 34.49 3.71
136 137 5.365021 AGAATGGTTCAATAGTGAGGGAG 57.635 43.478 0.00 0.00 34.49 4.30
137 138 6.352737 GGTTAGAATGGTTCAATAGTGAGGGA 60.353 42.308 0.00 0.00 34.49 4.20
138 139 5.823045 GGTTAGAATGGTTCAATAGTGAGGG 59.177 44.000 0.00 0.00 34.49 4.30
139 140 5.823045 GGGTTAGAATGGTTCAATAGTGAGG 59.177 44.000 0.00 0.00 34.49 3.86
140 141 6.414732 TGGGTTAGAATGGTTCAATAGTGAG 58.585 40.000 0.00 0.00 34.49 3.51
141 142 6.214615 TCTGGGTTAGAATGGTTCAATAGTGA 59.785 38.462 0.00 0.00 30.84 3.41
142 143 6.414732 TCTGGGTTAGAATGGTTCAATAGTG 58.585 40.000 0.00 0.00 30.84 2.74
143 144 6.636454 TCTGGGTTAGAATGGTTCAATAGT 57.364 37.500 0.00 0.00 30.84 2.12
144 145 7.393234 TGTTTCTGGGTTAGAATGGTTCAATAG 59.607 37.037 0.00 0.00 44.54 1.73
145 146 7.235079 TGTTTCTGGGTTAGAATGGTTCAATA 58.765 34.615 0.00 0.00 44.54 1.90
146 147 6.074648 TGTTTCTGGGTTAGAATGGTTCAAT 58.925 36.000 0.00 0.00 44.54 2.57
147 148 5.450453 TGTTTCTGGGTTAGAATGGTTCAA 58.550 37.500 0.00 0.00 44.54 2.69
148 149 5.055265 TGTTTCTGGGTTAGAATGGTTCA 57.945 39.130 0.00 0.00 44.54 3.18
149 150 6.399639 TTTGTTTCTGGGTTAGAATGGTTC 57.600 37.500 0.00 0.00 44.54 3.62
150 151 6.994421 ATTTGTTTCTGGGTTAGAATGGTT 57.006 33.333 0.00 0.00 44.54 3.67
151 152 7.308951 CGTTATTTGTTTCTGGGTTAGAATGGT 60.309 37.037 0.00 0.00 44.54 3.55
152 153 7.027161 CGTTATTTGTTTCTGGGTTAGAATGG 58.973 38.462 0.00 0.00 44.54 3.16
153 154 7.027161 CCGTTATTTGTTTCTGGGTTAGAATG 58.973 38.462 0.00 0.00 44.54 2.67
154 155 6.349860 GCCGTTATTTGTTTCTGGGTTAGAAT 60.350 38.462 0.00 0.00 44.54 2.40
155 156 5.048573 GCCGTTATTTGTTTCTGGGTTAGAA 60.049 40.000 0.00 0.00 43.53 2.10
156 157 4.456566 GCCGTTATTTGTTTCTGGGTTAGA 59.543 41.667 0.00 0.00 0.00 2.10
157 158 4.380128 GGCCGTTATTTGTTTCTGGGTTAG 60.380 45.833 0.00 0.00 0.00 2.34
158 159 3.506844 GGCCGTTATTTGTTTCTGGGTTA 59.493 43.478 0.00 0.00 0.00 2.85
159 160 2.297880 GGCCGTTATTTGTTTCTGGGTT 59.702 45.455 0.00 0.00 0.00 4.11
160 161 1.890489 GGCCGTTATTTGTTTCTGGGT 59.110 47.619 0.00 0.00 0.00 4.51
161 162 1.889829 TGGCCGTTATTTGTTTCTGGG 59.110 47.619 0.00 0.00 0.00 4.45
162 163 2.294791 TGTGGCCGTTATTTGTTTCTGG 59.705 45.455 0.00 0.00 0.00 3.86
163 164 3.634568 TGTGGCCGTTATTTGTTTCTG 57.365 42.857 0.00 0.00 0.00 3.02
164 165 4.098807 AGTTTGTGGCCGTTATTTGTTTCT 59.901 37.500 0.00 0.00 0.00 2.52
165 166 4.364860 AGTTTGTGGCCGTTATTTGTTTC 58.635 39.130 0.00 0.00 0.00 2.78
166 167 4.394439 AGTTTGTGGCCGTTATTTGTTT 57.606 36.364 0.00 0.00 0.00 2.83
167 168 4.581409 ACTAGTTTGTGGCCGTTATTTGTT 59.419 37.500 0.00 0.00 0.00 2.83
168 169 4.139038 ACTAGTTTGTGGCCGTTATTTGT 58.861 39.130 0.00 0.00 0.00 2.83
169 170 4.759516 ACTAGTTTGTGGCCGTTATTTG 57.240 40.909 0.00 0.00 0.00 2.32
170 171 4.939439 CCTACTAGTTTGTGGCCGTTATTT 59.061 41.667 0.00 0.00 0.00 1.40
171 172 4.510571 CCTACTAGTTTGTGGCCGTTATT 58.489 43.478 0.00 0.00 0.00 1.40
172 173 3.118519 CCCTACTAGTTTGTGGCCGTTAT 60.119 47.826 0.00 0.00 0.00 1.89
173 174 2.234414 CCCTACTAGTTTGTGGCCGTTA 59.766 50.000 0.00 0.00 0.00 3.18
174 175 1.002773 CCCTACTAGTTTGTGGCCGTT 59.997 52.381 0.00 0.00 0.00 4.44
175 176 0.611714 CCCTACTAGTTTGTGGCCGT 59.388 55.000 0.00 0.00 0.00 5.68
176 177 0.743345 GCCCTACTAGTTTGTGGCCG 60.743 60.000 0.00 0.00 32.74 6.13
177 178 0.743345 CGCCCTACTAGTTTGTGGCC 60.743 60.000 0.00 0.00 35.46 5.36
178 179 0.248289 TCGCCCTACTAGTTTGTGGC 59.752 55.000 0.00 7.59 35.55 5.01
179 180 1.739371 GCTCGCCCTACTAGTTTGTGG 60.739 57.143 0.00 0.00 0.00 4.17
180 181 1.641577 GCTCGCCCTACTAGTTTGTG 58.358 55.000 0.00 0.00 0.00 3.33
181 182 0.172803 CGCTCGCCCTACTAGTTTGT 59.827 55.000 0.00 0.00 0.00 2.83
182 183 0.454600 TCGCTCGCCCTACTAGTTTG 59.545 55.000 0.00 0.00 0.00 2.93
183 184 0.739561 CTCGCTCGCCCTACTAGTTT 59.260 55.000 0.00 0.00 0.00 2.66
184 185 1.726533 GCTCGCTCGCCCTACTAGTT 61.727 60.000 0.00 0.00 0.00 2.24
185 186 2.188161 GCTCGCTCGCCCTACTAGT 61.188 63.158 0.00 0.00 0.00 2.57
186 187 2.640421 GCTCGCTCGCCCTACTAG 59.360 66.667 0.00 0.00 0.00 2.57
187 188 3.277602 CGCTCGCTCGCCCTACTA 61.278 66.667 0.00 0.00 0.00 1.82
189 190 4.615834 CTCGCTCGCTCGCCCTAC 62.616 72.222 0.00 0.00 0.00 3.18
194 195 4.180946 TTCTCCTCGCTCGCTCGC 62.181 66.667 0.00 0.00 0.00 5.03
195 196 2.024022 CTTCTCCTCGCTCGCTCG 59.976 66.667 0.00 0.00 0.00 5.03
196 197 1.226547 CACTTCTCCTCGCTCGCTC 60.227 63.158 0.00 0.00 0.00 5.03
197 198 2.705821 CCACTTCTCCTCGCTCGCT 61.706 63.158 0.00 0.00 0.00 4.93
198 199 2.202676 CCACTTCTCCTCGCTCGC 60.203 66.667 0.00 0.00 0.00 5.03
199 200 2.492090 CCCACTTCTCCTCGCTCG 59.508 66.667 0.00 0.00 0.00 5.03
200 201 2.185608 GCCCACTTCTCCTCGCTC 59.814 66.667 0.00 0.00 0.00 5.03
201 202 3.394836 GGCCCACTTCTCCTCGCT 61.395 66.667 0.00 0.00 0.00 4.93
202 203 4.821589 CGGCCCACTTCTCCTCGC 62.822 72.222 0.00 0.00 0.00 5.03
203 204 4.148825 CCGGCCCACTTCTCCTCG 62.149 72.222 0.00 0.00 0.00 4.63
204 205 2.523453 GAACCGGCCCACTTCTCCTC 62.523 65.000 0.00 0.00 0.00 3.71
205 206 2.529389 AACCGGCCCACTTCTCCT 60.529 61.111 0.00 0.00 0.00 3.69
206 207 2.046217 GAACCGGCCCACTTCTCC 60.046 66.667 0.00 0.00 0.00 3.71
207 208 0.322546 AATGAACCGGCCCACTTCTC 60.323 55.000 0.00 0.00 0.00 2.87
208 209 0.988832 TAATGAACCGGCCCACTTCT 59.011 50.000 0.00 0.00 0.00 2.85
209 210 1.092348 GTAATGAACCGGCCCACTTC 58.908 55.000 0.00 0.00 0.00 3.01
210 211 0.402504 TGTAATGAACCGGCCCACTT 59.597 50.000 0.00 0.00 0.00 3.16
211 212 0.402504 TTGTAATGAACCGGCCCACT 59.597 50.000 0.00 0.00 0.00 4.00
212 213 0.524414 GTTGTAATGAACCGGCCCAC 59.476 55.000 0.00 0.00 0.00 4.61
213 214 0.609681 GGTTGTAATGAACCGGCCCA 60.610 55.000 0.00 0.00 36.28 5.36
214 215 1.317431 GGGTTGTAATGAACCGGCCC 61.317 60.000 0.00 0.00 45.67 5.80
215 216 1.650314 CGGGTTGTAATGAACCGGCC 61.650 60.000 0.00 0.00 45.67 6.13
216 217 1.798087 CGGGTTGTAATGAACCGGC 59.202 57.895 0.00 0.00 45.67 6.13
217 218 1.798087 GCGGGTTGTAATGAACCGG 59.202 57.895 0.00 0.00 45.67 5.28
218 219 1.422269 CGCGGGTTGTAATGAACCG 59.578 57.895 0.00 0.00 45.67 4.44
219 220 1.135939 GCGCGGGTTGTAATGAACC 59.864 57.895 8.83 0.00 44.22 3.62
220 221 1.225908 CGCGCGGGTTGTAATGAAC 60.226 57.895 24.84 0.00 0.00 3.18
221 222 0.389556 TACGCGCGGGTTGTAATGAA 60.390 50.000 33.93 10.73 0.00 2.57
222 223 0.389556 TTACGCGCGGGTTGTAATGA 60.390 50.000 33.93 11.55 0.00 2.57
223 224 0.025770 CTTACGCGCGGGTTGTAATG 59.974 55.000 33.93 13.98 0.00 1.90
224 225 0.108709 TCTTACGCGCGGGTTGTAAT 60.109 50.000 33.93 12.98 0.00 1.89
225 226 0.319383 TTCTTACGCGCGGGTTGTAA 60.319 50.000 33.93 20.51 0.00 2.41
226 227 1.008361 GTTCTTACGCGCGGGTTGTA 61.008 55.000 33.93 13.99 0.00 2.41
227 228 2.029369 TTCTTACGCGCGGGTTGT 59.971 55.556 33.93 15.47 0.00 3.32
228 229 2.472934 GTTCTTACGCGCGGGTTG 59.527 61.111 33.93 24.74 0.00 3.77
229 230 2.720358 AAGGTTCTTACGCGCGGGTT 62.720 55.000 33.93 16.32 0.00 4.11
230 231 3.230522 AAGGTTCTTACGCGCGGGT 62.231 57.895 35.22 31.66 0.00 5.28
231 232 2.433664 AAGGTTCTTACGCGCGGG 60.434 61.111 35.22 22.69 0.00 6.13
232 233 1.082117 ATGAAGGTTCTTACGCGCGG 61.082 55.000 35.22 16.94 0.00 6.46
233 234 0.719465 AATGAAGGTTCTTACGCGCG 59.281 50.000 30.96 30.96 0.00 6.86
234 235 1.730064 TCAATGAAGGTTCTTACGCGC 59.270 47.619 5.73 0.00 0.00 6.86
235 236 4.317139 CGTATCAATGAAGGTTCTTACGCG 60.317 45.833 3.53 3.53 0.00 6.01
236 237 4.025979 CCGTATCAATGAAGGTTCTTACGC 60.026 45.833 5.19 0.00 0.00 4.42
237 238 5.345702 TCCGTATCAATGAAGGTTCTTACG 58.654 41.667 4.04 4.04 0.00 3.18
238 239 6.202954 CCATCCGTATCAATGAAGGTTCTTAC 59.797 42.308 0.00 0.00 0.00 2.34
239 240 6.099125 TCCATCCGTATCAATGAAGGTTCTTA 59.901 38.462 0.00 0.00 0.00 2.10
240 241 5.104527 TCCATCCGTATCAATGAAGGTTCTT 60.105 40.000 0.00 0.00 0.00 2.52
241 242 4.408921 TCCATCCGTATCAATGAAGGTTCT 59.591 41.667 0.00 0.00 0.00 3.01
242 243 4.703897 TCCATCCGTATCAATGAAGGTTC 58.296 43.478 0.00 0.00 0.00 3.62
243 244 4.444876 CCTCCATCCGTATCAATGAAGGTT 60.445 45.833 0.00 0.00 0.00 3.50
244 245 3.071602 CCTCCATCCGTATCAATGAAGGT 59.928 47.826 0.00 0.00 0.00 3.50
245 246 3.324846 TCCTCCATCCGTATCAATGAAGG 59.675 47.826 0.00 0.00 0.00 3.46
246 247 4.039730 AGTCCTCCATCCGTATCAATGAAG 59.960 45.833 0.00 0.00 0.00 3.02
247 248 3.967326 AGTCCTCCATCCGTATCAATGAA 59.033 43.478 0.00 0.00 0.00 2.57
248 249 3.574396 GAGTCCTCCATCCGTATCAATGA 59.426 47.826 0.00 0.00 0.00 2.57
249 250 3.612717 CGAGTCCTCCATCCGTATCAATG 60.613 52.174 0.00 0.00 0.00 2.82
250 251 2.558795 CGAGTCCTCCATCCGTATCAAT 59.441 50.000 0.00 0.00 0.00 2.57
251 252 1.954382 CGAGTCCTCCATCCGTATCAA 59.046 52.381 0.00 0.00 0.00 2.57
252 253 1.605753 CGAGTCCTCCATCCGTATCA 58.394 55.000 0.00 0.00 0.00 2.15
253 254 0.241481 GCGAGTCCTCCATCCGTATC 59.759 60.000 0.00 0.00 0.00 2.24
254 255 0.467474 TGCGAGTCCTCCATCCGTAT 60.467 55.000 0.00 0.00 0.00 3.06
255 256 1.077285 TGCGAGTCCTCCATCCGTA 60.077 57.895 0.00 0.00 0.00 4.02
256 257 2.362503 TGCGAGTCCTCCATCCGT 60.363 61.111 0.00 0.00 0.00 4.69
257 258 1.101635 TAGTGCGAGTCCTCCATCCG 61.102 60.000 0.00 0.00 0.00 4.18
258 259 1.067821 CTTAGTGCGAGTCCTCCATCC 59.932 57.143 0.00 0.00 0.00 3.51
259 260 1.537135 GCTTAGTGCGAGTCCTCCATC 60.537 57.143 0.00 0.00 0.00 3.51
260 261 0.461961 GCTTAGTGCGAGTCCTCCAT 59.538 55.000 0.00 0.00 0.00 3.41
261 262 1.890894 GCTTAGTGCGAGTCCTCCA 59.109 57.895 0.00 0.00 0.00 3.86
262 263 4.816990 GCTTAGTGCGAGTCCTCC 57.183 61.111 0.00 0.00 0.00 4.30
271 272 4.477780 GGTGACTATATCTCGCTTAGTGC 58.522 47.826 0.00 0.00 38.57 4.40
272 273 4.713806 CGGTGACTATATCTCGCTTAGTG 58.286 47.826 0.00 0.00 0.00 2.74
273 274 3.188873 GCGGTGACTATATCTCGCTTAGT 59.811 47.826 0.00 0.00 42.89 2.24
274 275 3.725305 CGCGGTGACTATATCTCGCTTAG 60.725 52.174 0.00 0.00 43.51 2.18
275 276 2.159037 CGCGGTGACTATATCTCGCTTA 59.841 50.000 0.00 0.00 43.51 3.09
276 277 1.069159 CGCGGTGACTATATCTCGCTT 60.069 52.381 0.00 0.00 43.51 4.68
277 278 0.517755 CGCGGTGACTATATCTCGCT 59.482 55.000 0.00 0.00 43.51 4.93
278 279 1.066114 GCGCGGTGACTATATCTCGC 61.066 60.000 8.83 0.00 42.82 5.03
279 280 0.454620 GGCGCGGTGACTATATCTCG 60.455 60.000 8.83 0.00 0.00 4.04
280 281 0.454620 CGGCGCGGTGACTATATCTC 60.455 60.000 8.83 0.00 0.00 2.75
281 282 1.170919 ACGGCGCGGTGACTATATCT 61.171 55.000 20.65 0.00 0.00 1.98
282 283 0.318445 AACGGCGCGGTGACTATATC 60.318 55.000 22.01 0.00 0.00 1.63
283 284 0.103572 AAACGGCGCGGTGACTATAT 59.896 50.000 22.01 0.44 0.00 0.86
284 285 0.526096 GAAACGGCGCGGTGACTATA 60.526 55.000 22.01 0.00 0.00 1.31
285 286 1.808390 GAAACGGCGCGGTGACTAT 60.808 57.895 22.01 2.04 0.00 2.12
286 287 2.431260 GAAACGGCGCGGTGACTA 60.431 61.111 22.01 0.00 0.00 2.59
287 288 4.295119 AGAAACGGCGCGGTGACT 62.295 61.111 22.01 18.98 0.00 3.41
288 289 3.774702 GAGAAACGGCGCGGTGAC 61.775 66.667 22.01 17.15 0.00 3.67
291 292 4.736896 GAGGAGAAACGGCGCGGT 62.737 66.667 15.60 15.60 0.00 5.68
292 293 4.735132 TGAGGAGAAACGGCGCGG 62.735 66.667 14.03 14.03 0.00 6.46
293 294 3.479269 GTGAGGAGAAACGGCGCG 61.479 66.667 6.90 0.00 0.00 6.86
294 295 3.119096 GGTGAGGAGAAACGGCGC 61.119 66.667 6.90 0.00 0.00 6.53
295 296 2.558554 ATCGGTGAGGAGAAACGGCG 62.559 60.000 4.80 4.80 0.00 6.46
296 297 0.806492 GATCGGTGAGGAGAAACGGC 60.806 60.000 0.00 0.00 0.00 5.68
297 298 0.530744 TGATCGGTGAGGAGAAACGG 59.469 55.000 0.00 0.00 0.00 4.44
298 299 2.363788 TTGATCGGTGAGGAGAAACG 57.636 50.000 0.00 0.00 0.00 3.60
299 300 3.188667 GGTTTTGATCGGTGAGGAGAAAC 59.811 47.826 0.00 0.00 0.00 2.78
300 301 3.072476 AGGTTTTGATCGGTGAGGAGAAA 59.928 43.478 0.00 0.00 0.00 2.52
301 302 2.637872 AGGTTTTGATCGGTGAGGAGAA 59.362 45.455 0.00 0.00 0.00 2.87
302 303 2.257207 AGGTTTTGATCGGTGAGGAGA 58.743 47.619 0.00 0.00 0.00 3.71
303 304 2.770164 AGGTTTTGATCGGTGAGGAG 57.230 50.000 0.00 0.00 0.00 3.69
304 305 4.030913 AGATAGGTTTTGATCGGTGAGGA 58.969 43.478 0.00 0.00 0.00 3.71
305 306 4.122776 CAGATAGGTTTTGATCGGTGAGG 58.877 47.826 0.00 0.00 0.00 3.86
306 307 4.122776 CCAGATAGGTTTTGATCGGTGAG 58.877 47.826 0.00 0.00 0.00 3.51
307 308 3.118408 CCCAGATAGGTTTTGATCGGTGA 60.118 47.826 0.00 0.00 34.66 4.02
308 309 3.206150 CCCAGATAGGTTTTGATCGGTG 58.794 50.000 0.00 0.00 34.66 4.94
309 310 2.844348 ACCCAGATAGGTTTTGATCGGT 59.156 45.455 0.00 0.00 36.44 4.69
310 311 3.118408 TGACCCAGATAGGTTTTGATCGG 60.118 47.826 0.00 0.00 41.42 4.18
311 312 4.137116 TGACCCAGATAGGTTTTGATCG 57.863 45.455 0.00 0.00 41.42 3.69
312 313 5.934781 AGATGACCCAGATAGGTTTTGATC 58.065 41.667 0.00 0.00 41.42 2.92
313 314 5.983333 AGATGACCCAGATAGGTTTTGAT 57.017 39.130 0.00 0.00 41.42 2.57
314 315 6.884472 TTAGATGACCCAGATAGGTTTTGA 57.116 37.500 0.00 0.00 41.42 2.69
315 316 7.338710 TCTTTAGATGACCCAGATAGGTTTTG 58.661 38.462 0.00 0.00 41.42 2.44
316 317 7.510675 TCTTTAGATGACCCAGATAGGTTTT 57.489 36.000 0.00 0.00 41.42 2.43
317 318 7.366011 CCTTCTTTAGATGACCCAGATAGGTTT 60.366 40.741 0.00 0.00 41.42 3.27
318 319 6.100424 CCTTCTTTAGATGACCCAGATAGGTT 59.900 42.308 0.00 0.00 41.42 3.50
319 320 5.604650 CCTTCTTTAGATGACCCAGATAGGT 59.395 44.000 0.00 0.00 45.12 3.08
320 321 5.841237 TCCTTCTTTAGATGACCCAGATAGG 59.159 44.000 0.00 0.00 37.03 2.57
321 322 6.985653 TCCTTCTTTAGATGACCCAGATAG 57.014 41.667 0.00 0.00 0.00 2.08
322 323 7.075797 TGATCCTTCTTTAGATGACCCAGATA 58.924 38.462 0.00 0.00 0.00 1.98
323 324 5.907662 TGATCCTTCTTTAGATGACCCAGAT 59.092 40.000 0.00 0.00 0.00 2.90
324 325 5.280499 TGATCCTTCTTTAGATGACCCAGA 58.720 41.667 0.00 0.00 0.00 3.86
325 326 5.620738 TGATCCTTCTTTAGATGACCCAG 57.379 43.478 0.00 0.00 0.00 4.45
326 327 6.387192 TTTGATCCTTCTTTAGATGACCCA 57.613 37.500 0.00 0.00 0.00 4.51
327 328 9.579932 AATATTTGATCCTTCTTTAGATGACCC 57.420 33.333 0.00 0.00 0.00 4.46
333 334 9.555727 CGGGTAAATATTTGATCCTTCTTTAGA 57.444 33.333 11.05 0.00 0.00 2.10
334 335 8.784043 CCGGGTAAATATTTGATCCTTCTTTAG 58.216 37.037 11.05 0.00 0.00 1.85
335 336 7.722285 CCCGGGTAAATATTTGATCCTTCTTTA 59.278 37.037 14.18 0.00 0.00 1.85
336 337 6.549736 CCCGGGTAAATATTTGATCCTTCTTT 59.450 38.462 14.18 0.00 0.00 2.52
337 338 6.068670 CCCGGGTAAATATTTGATCCTTCTT 58.931 40.000 14.18 0.00 0.00 2.52
338 339 5.133830 ACCCGGGTAAATATTTGATCCTTCT 59.866 40.000 29.13 0.00 0.00 2.85
339 340 5.382616 ACCCGGGTAAATATTTGATCCTTC 58.617 41.667 29.13 0.00 0.00 3.46
340 341 5.397553 ACCCGGGTAAATATTTGATCCTT 57.602 39.130 29.13 0.00 0.00 3.36
341 342 6.713731 ATACCCGGGTAAATATTTGATCCT 57.286 37.500 36.23 13.02 33.99 3.24
342 343 7.094075 GGAAATACCCGGGTAAATATTTGATCC 60.094 40.741 36.23 23.93 33.99 3.36
343 344 7.449086 TGGAAATACCCGGGTAAATATTTGATC 59.551 37.037 36.23 19.75 38.00 2.92
344 345 7.299134 TGGAAATACCCGGGTAAATATTTGAT 58.701 34.615 36.23 15.68 38.00 2.57
345 346 6.670617 TGGAAATACCCGGGTAAATATTTGA 58.329 36.000 36.23 17.77 38.00 2.69
346 347 6.963083 TGGAAATACCCGGGTAAATATTTG 57.037 37.500 36.23 0.81 38.00 2.32
347 348 8.555896 AATTGGAAATACCCGGGTAAATATTT 57.444 30.769 36.23 30.17 38.00 1.40
348 349 9.831682 ATAATTGGAAATACCCGGGTAAATATT 57.168 29.630 36.23 26.02 38.00 1.28
349 350 9.831682 AATAATTGGAAATACCCGGGTAAATAT 57.168 29.630 36.23 21.76 38.00 1.28
350 351 9.657728 AAATAATTGGAAATACCCGGGTAAATA 57.342 29.630 36.23 17.62 38.00 1.40
351 352 8.555896 AAATAATTGGAAATACCCGGGTAAAT 57.444 30.769 36.23 26.07 38.00 1.40
352 353 7.974730 AAATAATTGGAAATACCCGGGTAAA 57.025 32.000 36.23 25.05 38.00 2.01
353 354 7.974730 AAAATAATTGGAAATACCCGGGTAA 57.025 32.000 36.23 21.60 38.00 2.85
354 355 7.974730 AAAAATAATTGGAAATACCCGGGTA 57.025 32.000 34.92 34.92 38.00 3.69
355 356 6.877668 AAAAATAATTGGAAATACCCGGGT 57.122 33.333 32.66 32.66 38.00 5.28
375 376 1.608590 CGCAAGAGGGCAGAAGAAAAA 59.391 47.619 0.00 0.00 43.02 1.94
376 377 1.202758 TCGCAAGAGGGCAGAAGAAAA 60.203 47.619 0.00 0.00 45.01 2.29
377 378 0.396435 TCGCAAGAGGGCAGAAGAAA 59.604 50.000 0.00 0.00 45.01 2.52
378 379 2.057830 TCGCAAGAGGGCAGAAGAA 58.942 52.632 0.00 0.00 45.01 2.52
379 380 3.791640 TCGCAAGAGGGCAGAAGA 58.208 55.556 0.00 0.00 45.01 2.87
390 391 6.867662 AAATAGATATGTTCCCTTCGCAAG 57.132 37.500 0.00 0.00 0.00 4.01
391 392 6.826231 TGAAAATAGATATGTTCCCTTCGCAA 59.174 34.615 1.23 0.00 30.47 4.85
392 393 6.260050 GTGAAAATAGATATGTTCCCTTCGCA 59.740 38.462 1.23 0.00 30.47 5.10
393 394 6.293462 GGTGAAAATAGATATGTTCCCTTCGC 60.293 42.308 1.23 0.00 30.47 4.70
394 395 6.765989 TGGTGAAAATAGATATGTTCCCTTCG 59.234 38.462 1.23 0.00 30.47 3.79
395 396 8.519799 TTGGTGAAAATAGATATGTTCCCTTC 57.480 34.615 1.23 0.00 30.47 3.46
396 397 8.116026 ACTTGGTGAAAATAGATATGTTCCCTT 58.884 33.333 1.23 0.00 30.47 3.95
397 398 7.643123 ACTTGGTGAAAATAGATATGTTCCCT 58.357 34.615 1.23 0.00 30.47 4.20
398 399 7.013369 GGACTTGGTGAAAATAGATATGTTCCC 59.987 40.741 1.23 3.11 30.47 3.97
399 400 7.254795 CGGACTTGGTGAAAATAGATATGTTCC 60.255 40.741 1.23 0.00 30.47 3.62
400 401 7.494625 TCGGACTTGGTGAAAATAGATATGTTC 59.505 37.037 0.00 0.00 31.87 3.18
401 402 7.280205 GTCGGACTTGGTGAAAATAGATATGTT 59.720 37.037 0.00 0.00 0.00 2.71
402 403 6.761714 GTCGGACTTGGTGAAAATAGATATGT 59.238 38.462 0.00 0.00 0.00 2.29
403 404 6.761242 TGTCGGACTTGGTGAAAATAGATATG 59.239 38.462 9.88 0.00 0.00 1.78
404 405 6.884832 TGTCGGACTTGGTGAAAATAGATAT 58.115 36.000 9.88 0.00 0.00 1.63
405 406 6.288941 TGTCGGACTTGGTGAAAATAGATA 57.711 37.500 9.88 0.00 0.00 1.98
406 407 5.160607 TGTCGGACTTGGTGAAAATAGAT 57.839 39.130 9.88 0.00 0.00 1.98
407 408 4.610605 TGTCGGACTTGGTGAAAATAGA 57.389 40.909 9.88 0.00 0.00 1.98
408 409 4.695455 ACATGTCGGACTTGGTGAAAATAG 59.305 41.667 22.96 0.58 0.00 1.73
409 410 4.454161 CACATGTCGGACTTGGTGAAAATA 59.546 41.667 22.96 0.00 0.00 1.40
410 411 3.253188 CACATGTCGGACTTGGTGAAAAT 59.747 43.478 22.96 2.98 0.00 1.82
411 412 2.616376 CACATGTCGGACTTGGTGAAAA 59.384 45.455 22.96 0.00 0.00 2.29
412 413 2.158885 TCACATGTCGGACTTGGTGAAA 60.159 45.455 22.96 6.77 0.00 2.69
413 414 1.414550 TCACATGTCGGACTTGGTGAA 59.585 47.619 22.96 10.28 0.00 3.18
414 415 1.044611 TCACATGTCGGACTTGGTGA 58.955 50.000 22.96 20.80 0.00 4.02
415 416 1.877637 TTCACATGTCGGACTTGGTG 58.122 50.000 22.96 19.30 0.00 4.17
416 417 2.631160 TTTCACATGTCGGACTTGGT 57.369 45.000 22.96 10.47 0.00 3.67
417 418 3.980646 TTTTTCACATGTCGGACTTGG 57.019 42.857 22.96 14.24 0.00 3.61
442 443 9.123902 TCTTTTTCACTCCATAATGTATGATGG 57.876 33.333 2.24 2.24 43.51 3.51
445 446 8.623903 GCATCTTTTTCACTCCATAATGTATGA 58.376 33.333 0.00 0.00 38.45 2.15
446 447 7.864379 GGCATCTTTTTCACTCCATAATGTATG 59.136 37.037 0.00 0.00 35.94 2.39
447 448 7.255242 CGGCATCTTTTTCACTCCATAATGTAT 60.255 37.037 0.00 0.00 0.00 2.29
448 449 6.038161 CGGCATCTTTTTCACTCCATAATGTA 59.962 38.462 0.00 0.00 0.00 2.29
449 450 5.163622 CGGCATCTTTTTCACTCCATAATGT 60.164 40.000 0.00 0.00 0.00 2.71
450 451 5.163622 ACGGCATCTTTTTCACTCCATAATG 60.164 40.000 0.00 0.00 0.00 1.90
451 452 4.949856 ACGGCATCTTTTTCACTCCATAAT 59.050 37.500 0.00 0.00 0.00 1.28
452 453 4.331968 ACGGCATCTTTTTCACTCCATAA 58.668 39.130 0.00 0.00 0.00 1.90
453 454 3.950397 ACGGCATCTTTTTCACTCCATA 58.050 40.909 0.00 0.00 0.00 2.74
454 455 2.795329 ACGGCATCTTTTTCACTCCAT 58.205 42.857 0.00 0.00 0.00 3.41
455 456 2.270352 ACGGCATCTTTTTCACTCCA 57.730 45.000 0.00 0.00 0.00 3.86
456 457 3.689649 ACATACGGCATCTTTTTCACTCC 59.310 43.478 0.00 0.00 0.00 3.85
457 458 4.391830 TGACATACGGCATCTTTTTCACTC 59.608 41.667 0.00 0.00 0.00 3.51
458 459 4.323417 TGACATACGGCATCTTTTTCACT 58.677 39.130 0.00 0.00 0.00 3.41
459 460 4.678509 TGACATACGGCATCTTTTTCAC 57.321 40.909 0.00 0.00 0.00 3.18
460 461 4.759693 AGTTGACATACGGCATCTTTTTCA 59.240 37.500 0.00 0.00 0.00 2.69
461 462 5.296813 AGTTGACATACGGCATCTTTTTC 57.703 39.130 0.00 0.00 0.00 2.29
462 463 5.163893 CGTAGTTGACATACGGCATCTTTTT 60.164 40.000 1.45 0.00 41.71 1.94
463 464 4.328983 CGTAGTTGACATACGGCATCTTTT 59.671 41.667 1.45 0.00 41.71 2.27
464 465 3.863424 CGTAGTTGACATACGGCATCTTT 59.137 43.478 1.45 0.00 41.71 2.52
465 466 3.444916 CGTAGTTGACATACGGCATCTT 58.555 45.455 1.45 0.00 41.71 2.40
466 467 3.079960 CGTAGTTGACATACGGCATCT 57.920 47.619 1.45 0.00 41.71 2.90
473 474 7.308435 AGGTTTGTAGTACGTAGTTGACATAC 58.692 38.462 8.48 12.02 37.78 2.39
474 475 7.452880 AGGTTTGTAGTACGTAGTTGACATA 57.547 36.000 8.48 0.66 37.78 2.29
475 476 6.336842 AGGTTTGTAGTACGTAGTTGACAT 57.663 37.500 8.48 0.00 37.78 3.06
476 477 5.772825 AGGTTTGTAGTACGTAGTTGACA 57.227 39.130 8.48 5.09 37.78 3.58
477 478 7.695618 CAGATAGGTTTGTAGTACGTAGTTGAC 59.304 40.741 8.48 2.28 37.78 3.18
478 479 7.148188 CCAGATAGGTTTGTAGTACGTAGTTGA 60.148 40.741 8.48 0.00 37.78 3.18
479 480 6.971184 CCAGATAGGTTTGTAGTACGTAGTTG 59.029 42.308 8.48 0.00 37.78 3.16
480 481 6.096001 CCCAGATAGGTTTGTAGTACGTAGTT 59.904 42.308 8.48 0.00 37.63 2.24
481 482 5.591877 CCCAGATAGGTTTGTAGTACGTAGT 59.408 44.000 8.23 8.23 39.76 2.73
482 483 5.824624 TCCCAGATAGGTTTGTAGTACGTAG 59.175 44.000 0.00 0.00 34.66 3.51
483 484 5.590259 GTCCCAGATAGGTTTGTAGTACGTA 59.410 44.000 0.00 0.00 34.66 3.57
484 485 4.400567 GTCCCAGATAGGTTTGTAGTACGT 59.599 45.833 0.00 0.00 34.66 3.57
485 486 4.497006 CGTCCCAGATAGGTTTGTAGTACG 60.497 50.000 0.00 0.00 34.66 3.67
486 487 4.641989 TCGTCCCAGATAGGTTTGTAGTAC 59.358 45.833 0.00 0.00 34.66 2.73
487 488 4.858850 TCGTCCCAGATAGGTTTGTAGTA 58.141 43.478 0.00 0.00 34.66 1.82
488 489 3.700038 CTCGTCCCAGATAGGTTTGTAGT 59.300 47.826 0.00 0.00 34.66 2.73
489 490 3.952323 TCTCGTCCCAGATAGGTTTGTAG 59.048 47.826 0.00 0.00 34.66 2.74
490 491 3.952323 CTCTCGTCCCAGATAGGTTTGTA 59.048 47.826 0.00 0.00 34.66 2.41
491 492 2.761208 CTCTCGTCCCAGATAGGTTTGT 59.239 50.000 0.00 0.00 34.66 2.83
492 493 3.024547 TCTCTCGTCCCAGATAGGTTTG 58.975 50.000 0.00 0.00 34.66 2.93
493 494 3.053544 TCTCTCTCGTCCCAGATAGGTTT 60.054 47.826 0.00 0.00 34.66 3.27
494 495 2.510382 TCTCTCTCGTCCCAGATAGGTT 59.490 50.000 0.00 0.00 34.66 3.50
495 496 2.105821 CTCTCTCTCGTCCCAGATAGGT 59.894 54.545 0.00 0.00 34.66 3.08
496 497 2.370519 TCTCTCTCTCGTCCCAGATAGG 59.629 54.545 0.00 0.00 37.03 2.57
497 498 3.323691 TCTCTCTCTCTCGTCCCAGATAG 59.676 52.174 0.00 0.00 0.00 2.08
498 499 3.310193 TCTCTCTCTCTCGTCCCAGATA 58.690 50.000 0.00 0.00 0.00 1.98
499 500 2.123589 TCTCTCTCTCTCGTCCCAGAT 58.876 52.381 0.00 0.00 0.00 2.90
500 501 1.574263 TCTCTCTCTCTCGTCCCAGA 58.426 55.000 0.00 0.00 0.00 3.86
504 505 2.104111 TCTCCATCTCTCTCTCTCGTCC 59.896 54.545 0.00 0.00 0.00 4.79
611 616 3.793888 GATCCGTCCACCCCACCC 61.794 72.222 0.00 0.00 0.00 4.61
623 636 2.607668 TAGTCGTTGCTGCCGATCCG 62.608 60.000 4.41 0.00 36.62 4.18
730 743 4.660938 GGGTGGGGGAGTGTGTGC 62.661 72.222 0.00 0.00 0.00 4.57
878 1210 2.919856 ATCCAGCGGAGGGATCGG 60.920 66.667 3.76 0.00 41.26 4.18
924 1344 4.794169 ACCATTTCAGAAAAATCCGAACG 58.206 39.130 0.00 0.00 0.00 3.95
970 1394 2.718731 CGCTTCTCGATCGAGGCT 59.281 61.111 37.28 0.00 42.20 4.58
1059 1483 1.929088 GAGGGGCTAGGGTTTGGGT 60.929 63.158 0.00 0.00 0.00 4.51
1094 1519 0.394565 GCGCACTGAGGGGATAAGAT 59.605 55.000 0.30 0.00 0.00 2.40
1095 1520 0.687757 AGCGCACTGAGGGGATAAGA 60.688 55.000 11.47 0.00 0.00 2.10
1096 1521 1.826024 AGCGCACTGAGGGGATAAG 59.174 57.895 11.47 0.00 0.00 1.73
1097 1522 4.050313 AGCGCACTGAGGGGATAA 57.950 55.556 11.47 0.00 0.00 1.75
1114 1539 2.186602 TTAGGGTTTCGCCATCCGCA 62.187 55.000 0.00 0.00 39.65 5.69
1195 1628 3.978571 GAGGCGGTTCTTGGGGAGC 62.979 68.421 0.00 0.00 0.00 4.70
1229 1662 0.179073 ATGCGGACGGAAATCTGGAG 60.179 55.000 0.00 0.00 0.00 3.86
1418 1851 0.321122 GCTGCTGCTGGTAGTTGAGT 60.321 55.000 8.53 0.00 36.03 3.41
1673 2110 9.060347 CATAACATAACAGGTAGCATTCAAGAT 57.940 33.333 0.00 0.00 0.00 2.40
1720 2157 2.373169 ACACCAACAGATCATCACAGGT 59.627 45.455 0.00 0.00 0.00 4.00
1737 2174 5.121221 ACAGTAAAGCAAGCATTAACACC 57.879 39.130 0.00 0.00 0.00 4.16
1782 2219 5.670485 TCACCATCACATGAACACTATACC 58.330 41.667 0.00 0.00 0.00 2.73
1801 2238 6.258947 GTCCTCTTGCTAACATAAGATTCACC 59.741 42.308 0.00 0.00 32.92 4.02
1883 2321 2.475519 CGGTTGATGATGTACCAAACGC 60.476 50.000 6.36 0.00 42.70 4.84
1903 2344 6.322491 TGTGACTTCAGACTAACATGATACG 58.678 40.000 0.00 0.00 0.00 3.06
1935 2376 0.523072 ATGGACATTCAACAGCGCAC 59.477 50.000 11.47 0.00 0.00 5.34
2057 2498 4.393062 AGAGTGCCAATGATAACAAAGACG 59.607 41.667 0.00 0.00 0.00 4.18
2115 2557 8.697292 AGATAATTACAGGAAGTTCTACCAGTC 58.303 37.037 2.25 0.00 0.00 3.51
2168 2610 5.182001 CCTAAAGGTGAGGAACAAGACATTG 59.818 44.000 0.00 0.00 38.14 2.82
2199 2641 6.041979 TGCTAGCATAAGATTCACCATCACTA 59.958 38.462 14.93 0.00 33.75 2.74
2247 2689 7.412237 GCATTTTTGCCTGTGATAATCTTTGAC 60.412 37.037 0.00 0.00 0.00 3.18
2287 2730 8.387333 TGCTAACTGGCCAAGGATATATAATA 57.613 34.615 7.01 0.00 0.00 0.98
2296 2739 0.991146 TCATGCTAACTGGCCAAGGA 59.009 50.000 7.01 2.51 0.00 3.36
2300 2743 0.991146 TCCTTCATGCTAACTGGCCA 59.009 50.000 4.71 4.71 0.00 5.36
2305 2748 3.580458 ACAGTGACTCCTTCATGCTAACT 59.420 43.478 0.00 0.00 36.32 2.24
2365 2808 6.377996 TGTGACAGCAATATAGCTTTGGAAAT 59.622 34.615 0.00 0.00 43.70 2.17
2409 2852 5.036117 TGTCCTTAAAACTCTGCAGAACT 57.964 39.130 18.85 4.52 0.00 3.01
2424 2867 2.092646 ACACTTGCACAACCTGTCCTTA 60.093 45.455 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.