Multiple sequence alignment - TraesCS4B01G310800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G310800 | chr4B | 100.000 | 3986 | 0 | 0 | 921 | 4906 | 600917180 | 600921165 | 0.000000e+00 | 7361.0 |
1 | TraesCS4B01G310800 | chr4B | 100.000 | 1434 | 0 | 0 | 5176 | 6609 | 600921435 | 600922868 | 0.000000e+00 | 2649.0 |
2 | TraesCS4B01G310800 | chr4B | 100.000 | 634 | 0 | 0 | 1 | 634 | 600916260 | 600916893 | 0.000000e+00 | 1171.0 |
3 | TraesCS4B01G310800 | chr4B | 92.857 | 112 | 7 | 1 | 3714 | 3824 | 215918429 | 215918318 | 1.910000e-35 | 161.0 |
4 | TraesCS4B01G310800 | chr4B | 94.231 | 104 | 6 | 0 | 3714 | 3817 | 255388276 | 255388173 | 6.860000e-35 | 159.0 |
5 | TraesCS4B01G310800 | chr4D | 91.370 | 1599 | 95 | 10 | 3316 | 4886 | 476867869 | 476869452 | 0.000000e+00 | 2148.0 |
6 | TraesCS4B01G310800 | chr4D | 93.123 | 1236 | 65 | 13 | 1851 | 3078 | 476866409 | 476867632 | 0.000000e+00 | 1794.0 |
7 | TraesCS4B01G310800 | chr4D | 88.855 | 1301 | 85 | 32 | 5296 | 6555 | 476869733 | 476871014 | 0.000000e+00 | 1544.0 |
8 | TraesCS4B01G310800 | chr4D | 88.426 | 648 | 35 | 20 | 944 | 1580 | 476865549 | 476866167 | 0.000000e+00 | 745.0 |
9 | TraesCS4B01G310800 | chr4D | 84.513 | 452 | 22 | 29 | 211 | 634 | 476864705 | 476865136 | 2.870000e-108 | 403.0 |
10 | TraesCS4B01G310800 | chr4D | 96.226 | 212 | 8 | 0 | 3103 | 3314 | 476867625 | 476867836 | 1.360000e-91 | 348.0 |
11 | TraesCS4B01G310800 | chr4D | 95.192 | 104 | 5 | 0 | 3714 | 3817 | 259497263 | 259497366 | 1.470000e-36 | 165.0 |
12 | TraesCS4B01G310800 | chr4A | 91.125 | 1476 | 82 | 23 | 1851 | 3314 | 683607015 | 683608453 | 0.000000e+00 | 1954.0 |
13 | TraesCS4B01G310800 | chr4A | 94.314 | 809 | 36 | 8 | 3909 | 4714 | 683609243 | 683610044 | 0.000000e+00 | 1230.0 |
14 | TraesCS4B01G310800 | chr4A | 83.927 | 871 | 67 | 35 | 973 | 1787 | 683606163 | 683607016 | 0.000000e+00 | 765.0 |
15 | TraesCS4B01G310800 | chr4A | 84.953 | 638 | 57 | 26 | 5176 | 5807 | 683610510 | 683611114 | 1.580000e-170 | 610.0 |
16 | TraesCS4B01G310800 | chr4A | 94.236 | 399 | 12 | 3 | 3316 | 3714 | 683608486 | 683608873 | 3.410000e-167 | 599.0 |
17 | TraesCS4B01G310800 | chr4A | 81.769 | 735 | 61 | 31 | 5861 | 6532 | 683611134 | 683611858 | 1.250000e-151 | 547.0 |
18 | TraesCS4B01G310800 | chr4A | 97.283 | 184 | 5 | 0 | 4712 | 4895 | 683610241 | 683610424 | 4.980000e-81 | 313.0 |
19 | TraesCS4B01G310800 | chr4A | 83.784 | 333 | 27 | 16 | 213 | 523 | 683605405 | 683605732 | 2.330000e-74 | 291.0 |
20 | TraesCS4B01G310800 | chr4A | 97.115 | 104 | 3 | 0 | 3714 | 3817 | 313632318 | 313632421 | 6.810000e-40 | 176.0 |
21 | TraesCS4B01G310800 | chr4A | 95.946 | 74 | 1 | 2 | 3817 | 3889 | 683608879 | 683608951 | 1.160000e-22 | 119.0 |
22 | TraesCS4B01G310800 | chr7B | 89.606 | 279 | 26 | 3 | 5295 | 5570 | 616473994 | 616474272 | 1.050000e-92 | 351.0 |
23 | TraesCS4B01G310800 | chr7B | 92.130 | 216 | 14 | 3 | 1 | 213 | 726752722 | 726752507 | 1.080000e-77 | 302.0 |
24 | TraesCS4B01G310800 | chr7B | 92.537 | 67 | 4 | 1 | 1786 | 1852 | 744409693 | 744409758 | 1.960000e-15 | 95.3 |
25 | TraesCS4B01G310800 | chr6B | 89.606 | 279 | 26 | 3 | 5295 | 5570 | 31046791 | 31046513 | 1.050000e-92 | 351.0 |
26 | TraesCS4B01G310800 | chr6B | 88.530 | 279 | 22 | 4 | 5295 | 5570 | 1948587 | 1948858 | 4.940000e-86 | 329.0 |
27 | TraesCS4B01G310800 | chr2B | 89.606 | 279 | 26 | 3 | 5295 | 5570 | 690337821 | 690337543 | 1.050000e-92 | 351.0 |
28 | TraesCS4B01G310800 | chr3B | 88.889 | 279 | 28 | 3 | 5295 | 5570 | 26535750 | 26536028 | 2.280000e-89 | 340.0 |
29 | TraesCS4B01G310800 | chr3B | 88.693 | 283 | 25 | 5 | 5295 | 5570 | 378769239 | 378769521 | 8.210000e-89 | 339.0 |
30 | TraesCS4B01G310800 | chr3B | 80.612 | 196 | 30 | 5 | 2549 | 2742 | 448772400 | 448772589 | 1.920000e-30 | 145.0 |
31 | TraesCS4B01G310800 | chr3B | 91.892 | 74 | 3 | 1 | 1786 | 1856 | 520448037 | 520447964 | 4.220000e-17 | 100.0 |
32 | TraesCS4B01G310800 | chr1B | 94.393 | 214 | 11 | 1 | 1 | 213 | 537664379 | 537664592 | 1.780000e-85 | 327.0 |
33 | TraesCS4B01G310800 | chr1B | 93.868 | 212 | 11 | 2 | 1 | 211 | 532393905 | 532393695 | 1.070000e-82 | 318.0 |
34 | TraesCS4B01G310800 | chr1B | 92.925 | 212 | 13 | 2 | 1 | 211 | 368420579 | 368420789 | 2.310000e-79 | 307.0 |
35 | TraesCS4B01G310800 | chr1B | 90.187 | 214 | 19 | 2 | 1 | 213 | 644600687 | 644600899 | 1.820000e-70 | 278.0 |
36 | TraesCS4B01G310800 | chr1B | 85.833 | 120 | 17 | 0 | 1023 | 1142 | 269036881 | 269037000 | 1.930000e-25 | 128.0 |
37 | TraesCS4B01G310800 | chr1B | 93.827 | 81 | 4 | 1 | 2679 | 2758 | 269038550 | 269038630 | 3.240000e-23 | 121.0 |
38 | TraesCS4B01G310800 | chrUn | 88.060 | 268 | 26 | 6 | 5308 | 5570 | 259647435 | 259647701 | 4.980000e-81 | 313.0 |
39 | TraesCS4B01G310800 | chr6A | 91.509 | 212 | 15 | 3 | 4 | 213 | 600700761 | 600700971 | 8.390000e-74 | 289.0 |
40 | TraesCS4B01G310800 | chr7D | 90.566 | 212 | 17 | 3 | 4 | 213 | 616885960 | 616886170 | 1.820000e-70 | 278.0 |
41 | TraesCS4B01G310800 | chr7D | 89.671 | 213 | 19 | 3 | 4 | 214 | 572316298 | 572316087 | 1.090000e-67 | 268.0 |
42 | TraesCS4B01G310800 | chr7D | 91.429 | 70 | 4 | 2 | 1786 | 1853 | 46702663 | 46702732 | 1.960000e-15 | 95.3 |
43 | TraesCS4B01G310800 | chr7D | 89.189 | 74 | 5 | 1 | 1785 | 1855 | 614653776 | 614653703 | 9.130000e-14 | 89.8 |
44 | TraesCS4B01G310800 | chr5B | 90.187 | 214 | 20 | 1 | 1 | 214 | 233810634 | 233810846 | 1.820000e-70 | 278.0 |
45 | TraesCS4B01G310800 | chr5B | 93.478 | 46 | 2 | 1 | 1037 | 1081 | 316378435 | 316378480 | 4.280000e-07 | 67.6 |
46 | TraesCS4B01G310800 | chr6D | 96.154 | 104 | 4 | 0 | 3714 | 3817 | 90111252 | 90111149 | 3.170000e-38 | 171.0 |
47 | TraesCS4B01G310800 | chr2D | 96.078 | 102 | 4 | 0 | 3715 | 3816 | 351973451 | 351973350 | 4.100000e-37 | 167.0 |
48 | TraesCS4B01G310800 | chr2D | 92.754 | 69 | 3 | 1 | 1786 | 1852 | 267707097 | 267707165 | 1.520000e-16 | 99.0 |
49 | TraesCS4B01G310800 | chr5D | 95.146 | 103 | 5 | 0 | 3714 | 3816 | 371860712 | 371860610 | 5.300000e-36 | 163.0 |
50 | TraesCS4B01G310800 | chr5D | 88.889 | 81 | 9 | 0 | 1783 | 1863 | 441356411 | 441356331 | 4.220000e-17 | 100.0 |
51 | TraesCS4B01G310800 | chr5D | 93.478 | 46 | 2 | 1 | 1037 | 1081 | 278310612 | 278310657 | 4.280000e-07 | 67.6 |
52 | TraesCS4B01G310800 | chr1A | 93.519 | 108 | 6 | 1 | 3714 | 3821 | 11576115 | 11576221 | 6.860000e-35 | 159.0 |
53 | TraesCS4B01G310800 | chr1A | 85.833 | 120 | 17 | 0 | 1023 | 1142 | 245536609 | 245536490 | 1.930000e-25 | 128.0 |
54 | TraesCS4B01G310800 | chr1A | 93.103 | 87 | 4 | 2 | 2674 | 2758 | 245534844 | 245534758 | 6.960000e-25 | 126.0 |
55 | TraesCS4B01G310800 | chr3D | 76.221 | 307 | 56 | 16 | 2422 | 2718 | 349855067 | 349855366 | 5.340000e-31 | 147.0 |
56 | TraesCS4B01G310800 | chr1D | 86.667 | 120 | 16 | 0 | 1023 | 1142 | 196489017 | 196488898 | 4.160000e-27 | 134.0 |
57 | TraesCS4B01G310800 | chr1D | 91.954 | 87 | 5 | 2 | 2674 | 2758 | 196487325 | 196487239 | 3.240000e-23 | 121.0 |
58 | TraesCS4B01G310800 | chr1D | 92.754 | 69 | 4 | 1 | 1786 | 1853 | 464799794 | 464799726 | 1.520000e-16 | 99.0 |
59 | TraesCS4B01G310800 | chr2A | 91.429 | 70 | 5 | 1 | 1785 | 1853 | 17251814 | 17251883 | 1.960000e-15 | 95.3 |
60 | TraesCS4B01G310800 | chr7A | 89.189 | 74 | 7 | 1 | 1780 | 1853 | 135963900 | 135963972 | 2.540000e-14 | 91.6 |
61 | TraesCS4B01G310800 | chr5A | 93.478 | 46 | 2 | 1 | 1037 | 1081 | 370192167 | 370192122 | 4.280000e-07 | 67.6 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4B01G310800 | chr4B | 600916260 | 600922868 | 6608 | False | 3727.000000 | 7361 | 100.000000 | 1 | 6609 | 3 | chr4B.!!$F1 | 6608 |
1 | TraesCS4B01G310800 | chr4D | 476864705 | 476871014 | 6309 | False | 1163.666667 | 2148 | 90.418833 | 211 | 6555 | 6 | chr4D.!!$F2 | 6344 |
2 | TraesCS4B01G310800 | chr4A | 683605405 | 683611858 | 6453 | False | 714.222222 | 1954 | 89.704111 | 213 | 6532 | 9 | chr4A.!!$F2 | 6319 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
67 | 68 | 0.036199 | TTTATTCACGTCCACCCCGG | 60.036 | 55.000 | 0.00 | 0.0 | 0.00 | 5.73 | F |
297 | 308 | 0.109735 | GCAGACACACGATCGAGTCA | 60.110 | 55.000 | 27.80 | 0.0 | 33.56 | 3.41 | F |
1519 | 1710 | 0.184692 | TTCCCCATCTGTGTGTTGCA | 59.815 | 50.000 | 0.00 | 0.0 | 0.00 | 4.08 | F |
1650 | 1878 | 0.250640 | AGGCTGGAAACTCAGTGCAG | 60.251 | 55.000 | 0.00 | 0.0 | 37.49 | 4.41 | F |
1717 | 1962 | 0.392595 | AATCCGGCCGTCCTTTTCTC | 60.393 | 55.000 | 26.12 | 0.0 | 0.00 | 2.87 | F |
2034 | 2284 | 1.062587 | GCCGATCAAATGTTCCAGTCG | 59.937 | 52.381 | 0.00 | 0.0 | 0.00 | 4.18 | F |
2517 | 2773 | 1.338674 | CCCGAGCACAATCACCTTACA | 60.339 | 52.381 | 0.00 | 0.0 | 0.00 | 2.41 | F |
4110 | 4693 | 0.446616 | GCTTGCGCTAAAGGTACACC | 59.553 | 55.000 | 9.73 | 0.0 | 0.00 | 4.16 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1838 | 2083 | 0.108281 | GTTTGCTACTCCCTCCGTCC | 60.108 | 60.000 | 0.00 | 0.0 | 0.00 | 4.79 | R |
1839 | 2084 | 0.606604 | TGTTTGCTACTCCCTCCGTC | 59.393 | 55.000 | 0.00 | 0.0 | 0.00 | 4.79 | R |
2937 | 3194 | 1.227943 | TGGCACCAGAGTTGAGCAC | 60.228 | 57.895 | 0.00 | 0.0 | 0.00 | 4.40 | R |
2997 | 3254 | 2.025981 | TGAGTATGGCATCTTGCTTGGT | 60.026 | 45.455 | 1.65 | 0.0 | 44.28 | 3.67 | R |
3344 | 3632 | 2.844451 | GCTGCAACACCTTCCGCAA | 61.844 | 57.895 | 0.00 | 0.0 | 33.21 | 4.85 | R |
3583 | 3871 | 3.508793 | CCAACATGAGCTGAAATGGAACT | 59.491 | 43.478 | 0.00 | 0.0 | 32.19 | 3.01 | R |
4288 | 4873 | 0.249447 | GGTTTTGTGAAGCACAGGGC | 60.249 | 55.000 | 0.24 | 0.0 | 45.39 | 5.19 | R |
6087 | 7041 | 0.526211 | TTCAGTACAGTCGCATCGCT | 59.474 | 50.000 | 0.00 | 0.0 | 0.00 | 4.93 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
66 | 67 | 1.810959 | TTTTATTCACGTCCACCCCG | 58.189 | 50.000 | 0.00 | 0.00 | 0.00 | 5.73 |
67 | 68 | 0.036199 | TTTATTCACGTCCACCCCGG | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
68 | 69 | 0.903924 | TTATTCACGTCCACCCCGGA | 60.904 | 55.000 | 0.73 | 0.00 | 43.61 | 5.14 |
75 | 76 | 2.448931 | TCCACCCCGGACAGGTTT | 60.449 | 61.111 | 0.73 | 0.00 | 39.64 | 3.27 |
76 | 77 | 2.079911 | TCCACCCCGGACAGGTTTT | 61.080 | 57.895 | 0.73 | 0.00 | 39.64 | 2.43 |
77 | 78 | 1.901464 | CCACCCCGGACAGGTTTTG | 60.901 | 63.158 | 0.73 | 0.00 | 38.74 | 2.44 |
78 | 79 | 1.901464 | CACCCCGGACAGGTTTTGG | 60.901 | 63.158 | 0.73 | 0.00 | 38.74 | 3.28 |
79 | 80 | 2.282887 | CCCCGGACAGGTTTTGGG | 60.283 | 66.667 | 0.73 | 0.00 | 38.74 | 4.12 |
80 | 81 | 2.282887 | CCCGGACAGGTTTTGGGG | 60.283 | 66.667 | 0.73 | 0.00 | 38.74 | 4.96 |
81 | 82 | 2.518933 | CCGGACAGGTTTTGGGGT | 59.481 | 61.111 | 0.00 | 0.00 | 34.51 | 4.95 |
82 | 83 | 1.901464 | CCGGACAGGTTTTGGGGTG | 60.901 | 63.158 | 0.00 | 0.00 | 34.51 | 4.61 |
83 | 84 | 2.561037 | CGGACAGGTTTTGGGGTGC | 61.561 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
84 | 85 | 2.561037 | GGACAGGTTTTGGGGTGCG | 61.561 | 63.158 | 0.00 | 0.00 | 0.00 | 5.34 |
85 | 86 | 2.520741 | ACAGGTTTTGGGGTGCGG | 60.521 | 61.111 | 0.00 | 0.00 | 0.00 | 5.69 |
86 | 87 | 3.989787 | CAGGTTTTGGGGTGCGGC | 61.990 | 66.667 | 0.00 | 0.00 | 0.00 | 6.53 |
124 | 125 | 3.633951 | GACCCGTCGGACAAACAC | 58.366 | 61.111 | 14.39 | 0.00 | 0.00 | 3.32 |
125 | 126 | 2.279650 | ACCCGTCGGACAAACACG | 60.280 | 61.111 | 14.39 | 0.00 | 0.00 | 4.49 |
128 | 129 | 3.227667 | CGTCGGACAAACACGGAC | 58.772 | 61.111 | 9.10 | 0.00 | 35.35 | 4.79 |
129 | 130 | 1.589461 | CGTCGGACAAACACGGACA | 60.589 | 57.895 | 9.10 | 0.00 | 37.42 | 4.02 |
130 | 131 | 0.942410 | CGTCGGACAAACACGGACAT | 60.942 | 55.000 | 9.10 | 0.00 | 37.42 | 3.06 |
131 | 132 | 0.511221 | GTCGGACAAACACGGACATG | 59.489 | 55.000 | 2.62 | 0.00 | 37.48 | 3.21 |
132 | 133 | 0.601576 | TCGGACAAACACGGACATGG | 60.602 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
133 | 134 | 1.573829 | CGGACAAACACGGACATGGG | 61.574 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
134 | 135 | 1.579429 | GACAAACACGGACATGGGC | 59.421 | 57.895 | 0.00 | 0.00 | 0.00 | 5.36 |
135 | 136 | 1.862602 | GACAAACACGGACATGGGCC | 61.863 | 60.000 | 0.00 | 0.00 | 0.00 | 5.80 |
136 | 137 | 1.900981 | CAAACACGGACATGGGCCA | 60.901 | 57.895 | 9.61 | 9.61 | 0.00 | 5.36 |
137 | 138 | 1.901464 | AAACACGGACATGGGCCAC | 60.901 | 57.895 | 9.28 | 0.00 | 0.00 | 5.01 |
138 | 139 | 3.860930 | AACACGGACATGGGCCACC | 62.861 | 63.158 | 9.28 | 4.64 | 37.24 | 4.61 |
139 | 140 | 4.033776 | CACGGACATGGGCCACCT | 62.034 | 66.667 | 9.28 | 0.00 | 37.76 | 4.00 |
140 | 141 | 3.717294 | ACGGACATGGGCCACCTC | 61.717 | 66.667 | 9.28 | 5.98 | 37.76 | 3.85 |
141 | 142 | 3.716195 | CGGACATGGGCCACCTCA | 61.716 | 66.667 | 9.28 | 0.00 | 37.76 | 3.86 |
142 | 143 | 3.010144 | GGACATGGGCCACCTCAT | 58.990 | 61.111 | 9.28 | 0.00 | 37.76 | 2.90 |
143 | 144 | 1.307647 | GGACATGGGCCACCTCATT | 59.692 | 57.895 | 9.28 | 0.00 | 37.76 | 2.57 |
144 | 145 | 1.039233 | GGACATGGGCCACCTCATTG | 61.039 | 60.000 | 9.28 | 4.32 | 37.76 | 2.82 |
145 | 146 | 1.669999 | GACATGGGCCACCTCATTGC | 61.670 | 60.000 | 9.28 | 0.00 | 37.76 | 3.56 |
146 | 147 | 2.042639 | ATGGGCCACCTCATTGCC | 60.043 | 61.111 | 9.28 | 0.00 | 44.59 | 4.52 |
147 | 148 | 4.738998 | TGGGCCACCTCATTGCCG | 62.739 | 66.667 | 0.00 | 0.00 | 46.31 | 5.69 |
148 | 149 | 4.740822 | GGGCCACCTCATTGCCGT | 62.741 | 66.667 | 4.39 | 0.00 | 46.31 | 5.68 |
149 | 150 | 3.134127 | GGCCACCTCATTGCCGTC | 61.134 | 66.667 | 0.00 | 0.00 | 35.08 | 4.79 |
150 | 151 | 3.134127 | GCCACCTCATTGCCGTCC | 61.134 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
151 | 152 | 2.438434 | CCACCTCATTGCCGTCCC | 60.438 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
152 | 153 | 2.350895 | CACCTCATTGCCGTCCCA | 59.649 | 61.111 | 0.00 | 0.00 | 0.00 | 4.37 |
153 | 154 | 1.303236 | CACCTCATTGCCGTCCCAA | 60.303 | 57.895 | 0.00 | 0.00 | 0.00 | 4.12 |
154 | 155 | 0.893270 | CACCTCATTGCCGTCCCAAA | 60.893 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
155 | 156 | 0.893727 | ACCTCATTGCCGTCCCAAAC | 60.894 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
201 | 202 | 3.043121 | GTTTGGGTCGCGCGGTAA | 61.043 | 61.111 | 31.69 | 16.53 | 0.00 | 2.85 |
202 | 203 | 2.280660 | TTTGGGTCGCGCGGTAAA | 60.281 | 55.556 | 31.69 | 21.09 | 0.00 | 2.01 |
203 | 204 | 1.890979 | TTTGGGTCGCGCGGTAAAA | 60.891 | 52.632 | 31.69 | 21.01 | 0.00 | 1.52 |
204 | 205 | 1.235948 | TTTGGGTCGCGCGGTAAAAT | 61.236 | 50.000 | 31.69 | 0.00 | 0.00 | 1.82 |
205 | 206 | 1.235948 | TTGGGTCGCGCGGTAAAATT | 61.236 | 50.000 | 31.69 | 0.00 | 0.00 | 1.82 |
206 | 207 | 1.226184 | GGGTCGCGCGGTAAAATTG | 60.226 | 57.895 | 31.69 | 0.00 | 0.00 | 2.32 |
207 | 208 | 1.226184 | GGTCGCGCGGTAAAATTGG | 60.226 | 57.895 | 31.69 | 0.00 | 0.00 | 3.16 |
208 | 209 | 1.866059 | GTCGCGCGGTAAAATTGGC | 60.866 | 57.895 | 31.69 | 0.00 | 0.00 | 4.52 |
209 | 210 | 2.578445 | CGCGCGGTAAAATTGGCC | 60.578 | 61.111 | 24.84 | 0.00 | 0.00 | 5.36 |
217 | 218 | 2.485038 | CGGTAAAATTGGCCTTACACGT | 59.515 | 45.455 | 3.32 | 0.00 | 30.97 | 4.49 |
234 | 235 | 3.199677 | CACGTTTGGAGTTCACCAGTAA | 58.800 | 45.455 | 0.00 | 0.00 | 41.19 | 2.24 |
238 | 239 | 4.319477 | CGTTTGGAGTTCACCAGTAATGTG | 60.319 | 45.833 | 0.00 | 0.00 | 41.19 | 3.21 |
261 | 265 | 2.353607 | CTACGCGCCGATCCAGAC | 60.354 | 66.667 | 5.73 | 0.00 | 0.00 | 3.51 |
270 | 274 | 0.539901 | CCGATCCAGACCCCTCGTAT | 60.540 | 60.000 | 0.00 | 0.00 | 0.00 | 3.06 |
297 | 308 | 0.109735 | GCAGACACACGATCGAGTCA | 60.110 | 55.000 | 27.80 | 0.00 | 33.56 | 3.41 |
369 | 384 | 0.512952 | CGCTTCCCGAGTCAACAAAG | 59.487 | 55.000 | 0.00 | 0.00 | 40.02 | 2.77 |
373 | 388 | 3.066203 | GCTTCCCGAGTCAACAAAGAAAA | 59.934 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
374 | 389 | 4.439563 | GCTTCCCGAGTCAACAAAGAAAAA | 60.440 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
509 | 550 | 2.030335 | CGAAACAAATCGATCGCATCCA | 59.970 | 45.455 | 11.09 | 0.00 | 45.48 | 3.41 |
511 | 552 | 3.885484 | AACAAATCGATCGCATCCATC | 57.115 | 42.857 | 11.09 | 0.00 | 0.00 | 3.51 |
543 | 584 | 3.947132 | CTGCAGTCCAGTCCGCCTG | 62.947 | 68.421 | 5.25 | 0.00 | 41.15 | 4.85 |
552 | 593 | 4.500116 | GTCCGCCTGACGCCTCTC | 62.500 | 72.222 | 0.00 | 0.00 | 41.76 | 3.20 |
556 | 597 | 4.863925 | GCCTGACGCCTCTCTCGC | 62.864 | 72.222 | 0.00 | 0.00 | 0.00 | 5.03 |
577 | 618 | 1.079681 | TCGTTCCGTTTCCATCCCG | 60.080 | 57.895 | 0.00 | 0.00 | 0.00 | 5.14 |
578 | 619 | 2.746803 | CGTTCCGTTTCCATCCCGC | 61.747 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
579 | 620 | 1.376812 | GTTCCGTTTCCATCCCGCT | 60.377 | 57.895 | 0.00 | 0.00 | 0.00 | 5.52 |
580 | 621 | 1.376683 | TTCCGTTTCCATCCCGCTG | 60.377 | 57.895 | 0.00 | 0.00 | 0.00 | 5.18 |
581 | 622 | 1.832719 | TTCCGTTTCCATCCCGCTGA | 61.833 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
582 | 623 | 2.106683 | CCGTTTCCATCCCGCTGAC | 61.107 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
583 | 624 | 2.106683 | CGTTTCCATCCCGCTGACC | 61.107 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
584 | 625 | 1.749258 | GTTTCCATCCCGCTGACCC | 60.749 | 63.158 | 0.00 | 0.00 | 0.00 | 4.46 |
585 | 626 | 2.978946 | TTTCCATCCCGCTGACCCC | 61.979 | 63.158 | 0.00 | 0.00 | 0.00 | 4.95 |
609 | 650 | 2.600731 | CTCGCCTCCTCCCTCTCT | 59.399 | 66.667 | 0.00 | 0.00 | 0.00 | 3.10 |
611 | 652 | 2.520741 | CGCCTCCTCCCTCTCTCC | 60.521 | 72.222 | 0.00 | 0.00 | 0.00 | 3.71 |
612 | 653 | 2.123033 | GCCTCCTCCCTCTCTCCC | 60.123 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
613 | 654 | 2.197324 | CCTCCTCCCTCTCTCCCG | 59.803 | 72.222 | 0.00 | 0.00 | 0.00 | 5.14 |
614 | 655 | 2.695970 | CCTCCTCCCTCTCTCCCGT | 61.696 | 68.421 | 0.00 | 0.00 | 0.00 | 5.28 |
616 | 657 | 2.517402 | CCTCCCTCTCTCCCGTCG | 60.517 | 72.222 | 0.00 | 0.00 | 0.00 | 5.12 |
617 | 658 | 3.213402 | CTCCCTCTCTCCCGTCGC | 61.213 | 72.222 | 0.00 | 0.00 | 0.00 | 5.19 |
628 | 669 | 0.906775 | TCCCGTCGCTTTATTCCCTT | 59.093 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
953 | 1097 | 2.355956 | GCGATTCGATCCCGTCCC | 60.356 | 66.667 | 10.88 | 0.00 | 37.05 | 4.46 |
1144 | 1288 | 1.870327 | TCTCCCCCACCATAGGTATCA | 59.130 | 52.381 | 0.00 | 0.00 | 32.11 | 2.15 |
1182 | 1339 | 2.334653 | CCTGGATCTCGCTCGCTC | 59.665 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
1183 | 1340 | 2.051435 | CTGGATCTCGCTCGCTCG | 60.051 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
1184 | 1341 | 4.257510 | TGGATCTCGCTCGCTCGC | 62.258 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
1185 | 1342 | 4.992294 | GGATCTCGCTCGCTCGCC | 62.992 | 72.222 | 0.00 | 0.00 | 0.00 | 5.54 |
1227 | 1393 | 4.396166 | CCGACTTGGAGACAGCAATAAATT | 59.604 | 41.667 | 0.00 | 0.00 | 44.54 | 1.82 |
1229 | 1395 | 5.551760 | ACTTGGAGACAGCAATAAATTCG | 57.448 | 39.130 | 0.00 | 0.00 | 44.54 | 3.34 |
1294 | 1460 | 3.728279 | GATTCCGGGCGGCGTTACT | 62.728 | 63.158 | 9.37 | 0.00 | 34.68 | 2.24 |
1315 | 1481 | 3.283684 | CGTGCCCCGCTGTTTCAA | 61.284 | 61.111 | 0.00 | 0.00 | 0.00 | 2.69 |
1368 | 1538 | 3.892200 | CGTACCAAACGTACCTGGT | 57.108 | 52.632 | 17.88 | 17.88 | 46.72 | 4.00 |
1372 | 1542 | 2.103537 | ACCAAACGTACCTGGTATGC | 57.896 | 50.000 | 22.88 | 5.31 | 44.28 | 3.14 |
1420 | 1604 | 4.676109 | TCAATTCAGGGATCAACCAACAT | 58.324 | 39.130 | 0.00 | 0.00 | 41.20 | 2.71 |
1421 | 1605 | 4.463539 | TCAATTCAGGGATCAACCAACATG | 59.536 | 41.667 | 0.00 | 0.00 | 41.20 | 3.21 |
1440 | 1624 | 1.656441 | GCCATGCCTATTTGCGGAG | 59.344 | 57.895 | 0.00 | 0.00 | 0.00 | 4.63 |
1473 | 1658 | 2.260869 | GCTTCTGCGGTTTCAGGCA | 61.261 | 57.895 | 0.00 | 0.00 | 37.63 | 4.75 |
1478 | 1663 | 3.140814 | GCGGTTTCAGGCATCCCC | 61.141 | 66.667 | 0.00 | 0.00 | 0.00 | 4.81 |
1514 | 1705 | 1.843368 | ATTGCTTCCCCATCTGTGTG | 58.157 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
1515 | 1706 | 0.478072 | TTGCTTCCCCATCTGTGTGT | 59.522 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
1516 | 1707 | 0.478072 | TGCTTCCCCATCTGTGTGTT | 59.522 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
1517 | 1708 | 0.883833 | GCTTCCCCATCTGTGTGTTG | 59.116 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
1518 | 1709 | 0.883833 | CTTCCCCATCTGTGTGTTGC | 59.116 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
1519 | 1710 | 0.184692 | TTCCCCATCTGTGTGTTGCA | 59.815 | 50.000 | 0.00 | 0.00 | 0.00 | 4.08 |
1520 | 1711 | 0.250858 | TCCCCATCTGTGTGTTGCAG | 60.251 | 55.000 | 0.00 | 0.00 | 35.43 | 4.41 |
1521 | 1712 | 1.582968 | CCCATCTGTGTGTTGCAGC | 59.417 | 57.895 | 0.00 | 0.00 | 34.21 | 5.25 |
1524 | 1716 | 2.153645 | CCATCTGTGTGTTGCAGCTAA | 58.846 | 47.619 | 1.17 | 0.00 | 34.21 | 3.09 |
1547 | 1740 | 1.738099 | CTTGGACCACTTCCTCGCG | 60.738 | 63.158 | 0.00 | 0.00 | 46.10 | 5.87 |
1568 | 1761 | 3.496130 | CGTATTTCAGCTATTCCTGCCTG | 59.504 | 47.826 | 0.00 | 0.00 | 32.87 | 4.85 |
1612 | 1840 | 3.896888 | TGAGCCAAGGATGAATGTTTGTT | 59.103 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
1616 | 1844 | 4.211794 | GCCAAGGATGAATGTTTGTTTGTG | 59.788 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
1617 | 1845 | 5.358922 | CCAAGGATGAATGTTTGTTTGTGT | 58.641 | 37.500 | 0.00 | 0.00 | 0.00 | 3.72 |
1618 | 1846 | 5.234757 | CCAAGGATGAATGTTTGTTTGTGTG | 59.765 | 40.000 | 0.00 | 0.00 | 0.00 | 3.82 |
1619 | 1847 | 5.596836 | AGGATGAATGTTTGTTTGTGTGT | 57.403 | 34.783 | 0.00 | 0.00 | 0.00 | 3.72 |
1628 | 1856 | 3.951775 | TTGTTTGTGTGTTCCTTTGCT | 57.048 | 38.095 | 0.00 | 0.00 | 0.00 | 3.91 |
1641 | 1869 | 2.087646 | CCTTTGCTAGAGGCTGGAAAC | 58.912 | 52.381 | 0.00 | 0.00 | 42.39 | 2.78 |
1650 | 1878 | 0.250640 | AGGCTGGAAACTCAGTGCAG | 60.251 | 55.000 | 0.00 | 0.00 | 37.49 | 4.41 |
1652 | 1880 | 1.155042 | GCTGGAAACTCAGTGCAGAG | 58.845 | 55.000 | 1.57 | 1.57 | 36.62 | 3.35 |
1660 | 1888 | 4.815533 | AACTCAGTGCAGAGATGTGTAT | 57.184 | 40.909 | 9.77 | 0.00 | 38.98 | 2.29 |
1668 | 1896 | 2.289820 | GCAGAGATGTGTATGCATGTGG | 59.710 | 50.000 | 10.16 | 0.00 | 38.54 | 4.17 |
1669 | 1897 | 3.538591 | CAGAGATGTGTATGCATGTGGT | 58.461 | 45.455 | 10.16 | 0.00 | 0.00 | 4.16 |
1672 | 1900 | 5.007039 | CAGAGATGTGTATGCATGTGGTTAC | 59.993 | 44.000 | 10.16 | 0.00 | 0.00 | 2.50 |
1673 | 1901 | 4.199310 | AGATGTGTATGCATGTGGTTACC | 58.801 | 43.478 | 10.16 | 0.00 | 0.00 | 2.85 |
1676 | 1904 | 5.104259 | TGTGTATGCATGTGGTTACCATA | 57.896 | 39.130 | 7.58 | 5.05 | 35.28 | 2.74 |
1677 | 1905 | 5.689835 | TGTGTATGCATGTGGTTACCATAT | 58.310 | 37.500 | 7.58 | 7.73 | 35.75 | 1.78 |
1681 | 1926 | 6.830838 | TGTATGCATGTGGTTACCATATTTCA | 59.169 | 34.615 | 10.98 | 11.93 | 33.07 | 2.69 |
1684 | 1929 | 7.509141 | TGCATGTGGTTACCATATTTCATAG | 57.491 | 36.000 | 10.98 | 0.72 | 33.07 | 2.23 |
1717 | 1962 | 0.392595 | AATCCGGCCGTCCTTTTCTC | 60.393 | 55.000 | 26.12 | 0.00 | 0.00 | 2.87 |
1720 | 1965 | 2.660802 | GGCCGTCCTTTTCTCGGA | 59.339 | 61.111 | 7.01 | 0.00 | 46.05 | 4.55 |
1722 | 1967 | 1.448013 | GCCGTCCTTTTCTCGGAGG | 60.448 | 63.158 | 4.96 | 0.00 | 46.05 | 4.30 |
1752 | 1997 | 1.066573 | CGACCAGGCACAAGAGAGAAT | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
1753 | 1998 | 2.354259 | GACCAGGCACAAGAGAGAATG | 58.646 | 52.381 | 0.00 | 0.00 | 0.00 | 2.67 |
1787 | 2032 | 5.010820 | CCCCTAGTTCCTGCATAACTACTAC | 59.989 | 48.000 | 14.59 | 0.00 | 38.18 | 2.73 |
1788 | 2033 | 5.834204 | CCCTAGTTCCTGCATAACTACTACT | 59.166 | 44.000 | 14.59 | 2.15 | 38.18 | 2.57 |
1789 | 2034 | 6.016108 | CCCTAGTTCCTGCATAACTACTACTC | 60.016 | 46.154 | 14.59 | 0.00 | 38.18 | 2.59 |
1790 | 2035 | 5.855740 | AGTTCCTGCATAACTACTACTCC | 57.144 | 43.478 | 11.73 | 0.00 | 35.44 | 3.85 |
1791 | 2036 | 5.269991 | AGTTCCTGCATAACTACTACTCCA | 58.730 | 41.667 | 11.73 | 0.00 | 35.44 | 3.86 |
1792 | 2037 | 5.900123 | AGTTCCTGCATAACTACTACTCCAT | 59.100 | 40.000 | 11.73 | 0.00 | 35.44 | 3.41 |
1793 | 2038 | 6.041069 | AGTTCCTGCATAACTACTACTCCATC | 59.959 | 42.308 | 11.73 | 0.00 | 35.44 | 3.51 |
1794 | 2039 | 4.833380 | TCCTGCATAACTACTACTCCATCC | 59.167 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
1795 | 2040 | 4.321304 | CCTGCATAACTACTACTCCATCCG | 60.321 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1796 | 2041 | 4.212716 | TGCATAACTACTACTCCATCCGT | 58.787 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
1797 | 2042 | 4.277672 | TGCATAACTACTACTCCATCCGTC | 59.722 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
1798 | 2043 | 4.321082 | GCATAACTACTACTCCATCCGTCC | 60.321 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1799 | 2044 | 1.964552 | ACTACTACTCCATCCGTCCG | 58.035 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1800 | 2045 | 1.487976 | ACTACTACTCCATCCGTCCGA | 59.512 | 52.381 | 0.00 | 0.00 | 0.00 | 4.55 |
1801 | 2046 | 2.106166 | ACTACTACTCCATCCGTCCGAT | 59.894 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1802 | 2047 | 2.945080 | ACTACTCCATCCGTCCGATA | 57.055 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
1803 | 2048 | 3.219176 | ACTACTCCATCCGTCCGATAA | 57.781 | 47.619 | 0.00 | 0.00 | 0.00 | 1.75 |
1804 | 2049 | 3.764218 | ACTACTCCATCCGTCCGATAAT | 58.236 | 45.455 | 0.00 | 0.00 | 0.00 | 1.28 |
1805 | 2050 | 4.914983 | ACTACTCCATCCGTCCGATAATA | 58.085 | 43.478 | 0.00 | 0.00 | 0.00 | 0.98 |
1806 | 2051 | 5.507637 | ACTACTCCATCCGTCCGATAATAT | 58.492 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
1807 | 2052 | 6.656902 | ACTACTCCATCCGTCCGATAATATA | 58.343 | 40.000 | 0.00 | 0.00 | 0.00 | 0.86 |
1808 | 2053 | 7.114754 | ACTACTCCATCCGTCCGATAATATAA | 58.885 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
1809 | 2054 | 7.778853 | ACTACTCCATCCGTCCGATAATATAAT | 59.221 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
1810 | 2055 | 6.806751 | ACTCCATCCGTCCGATAATATAATG | 58.193 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
1811 | 2056 | 6.380274 | ACTCCATCCGTCCGATAATATAATGT | 59.620 | 38.462 | 0.00 | 0.00 | 0.00 | 2.71 |
1812 | 2057 | 7.558807 | ACTCCATCCGTCCGATAATATAATGTA | 59.441 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
1813 | 2058 | 7.937649 | TCCATCCGTCCGATAATATAATGTAG | 58.062 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
1814 | 2059 | 7.558807 | TCCATCCGTCCGATAATATAATGTAGT | 59.441 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
1815 | 2060 | 7.648112 | CCATCCGTCCGATAATATAATGTAGTG | 59.352 | 40.741 | 0.00 | 0.00 | 0.00 | 2.74 |
1816 | 2061 | 7.692460 | TCCGTCCGATAATATAATGTAGTGT | 57.308 | 36.000 | 0.00 | 0.00 | 0.00 | 3.55 |
1817 | 2062 | 7.755591 | TCCGTCCGATAATATAATGTAGTGTC | 58.244 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
1818 | 2063 | 7.391275 | TCCGTCCGATAATATAATGTAGTGTCA | 59.609 | 37.037 | 0.00 | 0.00 | 0.00 | 3.58 |
1819 | 2064 | 8.024865 | CCGTCCGATAATATAATGTAGTGTCAA | 58.975 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
1820 | 2065 | 9.401873 | CGTCCGATAATATAATGTAGTGTCAAA | 57.598 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
1828 | 2073 | 9.982651 | AATATAATGTAGTGTCAAATACGCTCT | 57.017 | 29.630 | 0.00 | 0.00 | 46.05 | 4.09 |
1829 | 2074 | 9.982651 | ATATAATGTAGTGTCAAATACGCTCTT | 57.017 | 29.630 | 0.00 | 0.00 | 46.05 | 2.85 |
1831 | 2076 | 9.982651 | ATAATGTAGTGTCAAATACGCTCTTAT | 57.017 | 29.630 | 0.00 | 0.00 | 46.05 | 1.73 |
1833 | 2078 | 9.982651 | AATGTAGTGTCAAATACGCTCTTATAT | 57.017 | 29.630 | 0.00 | 0.00 | 46.05 | 0.86 |
1834 | 2079 | 9.982651 | ATGTAGTGTCAAATACGCTCTTATATT | 57.017 | 29.630 | 0.00 | 0.00 | 46.05 | 1.28 |
1838 | 2083 | 9.424319 | AGTGTCAAATACGCTCTTATATTATGG | 57.576 | 33.333 | 0.00 | 0.00 | 46.05 | 2.74 |
1839 | 2084 | 8.656849 | GTGTCAAATACGCTCTTATATTATGGG | 58.343 | 37.037 | 0.00 | 0.00 | 35.62 | 4.00 |
1840 | 2085 | 8.590204 | TGTCAAATACGCTCTTATATTATGGGA | 58.410 | 33.333 | 0.00 | 0.00 | 0.00 | 4.37 |
1841 | 2086 | 8.870879 | GTCAAATACGCTCTTATATTATGGGAC | 58.129 | 37.037 | 0.00 | 0.00 | 0.00 | 4.46 |
1842 | 2087 | 7.758076 | TCAAATACGCTCTTATATTATGGGACG | 59.242 | 37.037 | 0.00 | 0.00 | 0.00 | 4.79 |
1843 | 2088 | 4.451629 | ACGCTCTTATATTATGGGACGG | 57.548 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
1844 | 2089 | 4.084287 | ACGCTCTTATATTATGGGACGGA | 58.916 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
1845 | 2090 | 4.158025 | ACGCTCTTATATTATGGGACGGAG | 59.842 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
1846 | 2091 | 4.440250 | CGCTCTTATATTATGGGACGGAGG | 60.440 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1847 | 2092 | 4.141914 | GCTCTTATATTATGGGACGGAGGG | 60.142 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1848 | 2093 | 5.269991 | CTCTTATATTATGGGACGGAGGGA | 58.730 | 45.833 | 0.00 | 0.00 | 0.00 | 4.20 |
1849 | 2094 | 5.269991 | TCTTATATTATGGGACGGAGGGAG | 58.730 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
1850 | 2095 | 3.562108 | ATATTATGGGACGGAGGGAGT | 57.438 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
1851 | 2096 | 4.687262 | ATATTATGGGACGGAGGGAGTA | 57.313 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
1859 | 2104 | 1.207329 | GACGGAGGGAGTAGCAAACAT | 59.793 | 52.381 | 0.00 | 0.00 | 0.00 | 2.71 |
1869 | 2114 | 5.531287 | GGGAGTAGCAAACATATTTACCCTG | 59.469 | 44.000 | 0.00 | 0.00 | 0.00 | 4.45 |
1901 | 2146 | 4.008074 | AGGATGAATTCGTTCACAGTGT | 57.992 | 40.909 | 8.69 | 0.00 | 33.23 | 3.55 |
1926 | 2172 | 5.457799 | CAGCTCAAAGTGCATATATGTTTGC | 59.542 | 40.000 | 14.14 | 7.70 | 39.33 | 3.68 |
1938 | 2185 | 9.518906 | TGCATATATGTTTGCTGTTATTTTCTG | 57.481 | 29.630 | 14.14 | 0.00 | 39.60 | 3.02 |
1980 | 2228 | 2.341846 | ATATTACCGTGGGGCACAAG | 57.658 | 50.000 | 0.00 | 0.00 | 36.48 | 3.16 |
2003 | 2251 | 4.806247 | GCGTTCTATATGTCCATATCAGCC | 59.194 | 45.833 | 3.14 | 0.00 | 35.71 | 4.85 |
2034 | 2284 | 1.062587 | GCCGATCAAATGTTCCAGTCG | 59.937 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
2092 | 2346 | 3.031736 | TGAGTAGAGGGCATCCAACTAC | 58.968 | 50.000 | 4.94 | 0.00 | 41.20 | 2.73 |
2101 | 2355 | 4.475016 | AGGGCATCCAACTACTCAGTTATT | 59.525 | 41.667 | 0.00 | 0.00 | 43.30 | 1.40 |
2105 | 2359 | 6.109359 | GCATCCAACTACTCAGTTATTGACT | 58.891 | 40.000 | 2.90 | 0.00 | 43.30 | 3.41 |
2106 | 2360 | 6.256757 | GCATCCAACTACTCAGTTATTGACTC | 59.743 | 42.308 | 2.90 | 0.00 | 43.30 | 3.36 |
2107 | 2361 | 6.911250 | TCCAACTACTCAGTTATTGACTCA | 57.089 | 37.500 | 2.90 | 0.00 | 43.30 | 3.41 |
2108 | 2362 | 7.482169 | TCCAACTACTCAGTTATTGACTCAT | 57.518 | 36.000 | 2.90 | 0.00 | 43.30 | 2.90 |
2109 | 2363 | 7.323420 | TCCAACTACTCAGTTATTGACTCATG | 58.677 | 38.462 | 2.90 | 0.00 | 43.30 | 3.07 |
2110 | 2364 | 7.178451 | TCCAACTACTCAGTTATTGACTCATGA | 59.822 | 37.037 | 0.00 | 0.00 | 43.30 | 3.07 |
2111 | 2365 | 7.819415 | CCAACTACTCAGTTATTGACTCATGAA | 59.181 | 37.037 | 0.00 | 0.00 | 43.30 | 2.57 |
2112 | 2366 | 8.867935 | CAACTACTCAGTTATTGACTCATGAAG | 58.132 | 37.037 | 0.00 | 0.00 | 43.30 | 3.02 |
2192 | 2446 | 9.528489 | TTACTTGCCAGGATTTAGTTTTAATCT | 57.472 | 29.630 | 0.00 | 0.00 | 33.51 | 2.40 |
2195 | 2449 | 5.163663 | TGCCAGGATTTAGTTTTAATCTGCG | 60.164 | 40.000 | 0.00 | 0.00 | 33.51 | 5.18 |
2406 | 2661 | 5.246203 | TCTGCAGTATGTACTTCCAGACTTT | 59.754 | 40.000 | 14.67 | 0.00 | 34.82 | 2.66 |
2413 | 2668 | 7.982354 | AGTATGTACTTCCAGACTTTCAATAGC | 59.018 | 37.037 | 0.00 | 0.00 | 33.28 | 2.97 |
2517 | 2773 | 1.338674 | CCCGAGCACAATCACCTTACA | 60.339 | 52.381 | 0.00 | 0.00 | 0.00 | 2.41 |
2587 | 2844 | 7.490725 | CCATTCTACTGAGAGTGTATTTCTGTG | 59.509 | 40.741 | 0.00 | 0.00 | 37.65 | 3.66 |
2619 | 2876 | 7.594351 | TCTCTGCTGTATCATGTTCTTCTAT | 57.406 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2906 | 3163 | 6.530120 | TGCTCTTCTGACACCACTAAATTTA | 58.470 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2985 | 3242 | 3.133721 | TGGTCCCAAACAGGTCATTTTTG | 59.866 | 43.478 | 0.00 | 0.00 | 34.66 | 2.44 |
3061 | 3318 | 4.689612 | AGTGACTTCTCAAGTTTAGCCA | 57.310 | 40.909 | 0.00 | 0.00 | 43.03 | 4.75 |
3083 | 3340 | 9.775854 | AGCCATTATATAGATGCATGTATCTTC | 57.224 | 33.333 | 28.03 | 3.21 | 38.35 | 2.87 |
3101 | 3358 | 4.906618 | TCTTCCCAACCAAGTTGATAGTC | 58.093 | 43.478 | 3.87 | 0.00 | 45.28 | 2.59 |
3203 | 3460 | 6.183360 | CCCTTCTTCGTCATACTTGATTGAAC | 60.183 | 42.308 | 0.00 | 0.00 | 33.56 | 3.18 |
3208 | 3465 | 6.466308 | TCGTCATACTTGATTGAACTTGTG | 57.534 | 37.500 | 0.00 | 0.00 | 33.56 | 3.33 |
3314 | 3571 | 6.037940 | TGAGATTAGTGATGCTGAAATGCTTC | 59.962 | 38.462 | 0.00 | 0.00 | 37.55 | 3.86 |
3427 | 3715 | 8.547967 | TTCTTCTGTTAGTTTATGATGTCACC | 57.452 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
3479 | 3767 | 5.402054 | TGTATGGGCCAAGGAAATAGAAT | 57.598 | 39.130 | 11.89 | 0.00 | 0.00 | 2.40 |
3553 | 3841 | 7.961283 | GTGGACAAGGTATATTTTCTTTCGTTC | 59.039 | 37.037 | 0.00 | 0.00 | 0.00 | 3.95 |
3579 | 3867 | 6.594788 | AATCAAATGGTTACTTGCTGTGAT | 57.405 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
3583 | 3871 | 6.883756 | TCAAATGGTTACTTGCTGTGATGATA | 59.116 | 34.615 | 0.00 | 0.00 | 0.00 | 2.15 |
3693 | 3981 | 2.358582 | CCCGTTGCATGAATATTGAGCA | 59.641 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
3722 | 4010 | 4.524714 | CAGATACTACATGACCCTCCGATT | 59.475 | 45.833 | 0.00 | 0.00 | 0.00 | 3.34 |
3735 | 4023 | 5.855045 | ACCCTCCGATTCATATTACTTGTC | 58.145 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
3758 | 4067 | 5.704053 | TCGCTCAAACGGATGTATCTAGATA | 59.296 | 40.000 | 8.44 | 8.44 | 0.00 | 1.98 |
4110 | 4693 | 0.446616 | GCTTGCGCTAAAGGTACACC | 59.553 | 55.000 | 9.73 | 0.00 | 0.00 | 4.16 |
4130 | 4715 | 4.040755 | ACCCAGAGGAACATACTAAGCAT | 58.959 | 43.478 | 0.00 | 0.00 | 36.73 | 3.79 |
4241 | 4826 | 9.463902 | AAGTTAGAAGTTAGACAGATACTAGCA | 57.536 | 33.333 | 0.00 | 0.00 | 0.00 | 3.49 |
4308 | 4893 | 1.402787 | CCCTGTGCTTCACAAAACCT | 58.597 | 50.000 | 1.14 | 0.00 | 44.08 | 3.50 |
4322 | 4907 | 5.012664 | TCACAAAACCTATCTTCTGGCAGTA | 59.987 | 40.000 | 15.27 | 3.63 | 0.00 | 2.74 |
4325 | 4910 | 6.948309 | ACAAAACCTATCTTCTGGCAGTAAAT | 59.052 | 34.615 | 15.27 | 8.69 | 0.00 | 1.40 |
4338 | 4923 | 7.732996 | TCTGGCAGTAAATATTCCCTTACTAC | 58.267 | 38.462 | 15.27 | 0.00 | 36.45 | 2.73 |
4504 | 5092 | 5.781210 | TGTATCCTGAATTTGTTGTTGCA | 57.219 | 34.783 | 0.00 | 0.00 | 0.00 | 4.08 |
4600 | 5188 | 4.536090 | ACCATATCACTTGAGTTCCTGGAA | 59.464 | 41.667 | 4.68 | 4.68 | 0.00 | 3.53 |
4602 | 5190 | 5.530171 | CCATATCACTTGAGTTCCTGGAATG | 59.470 | 44.000 | 13.07 | 5.79 | 0.00 | 2.67 |
4609 | 5197 | 2.028112 | TGAGTTCCTGGAATGGAGAACG | 60.028 | 50.000 | 13.07 | 0.00 | 42.66 | 3.95 |
4779 | 5569 | 2.044551 | GGAGGGAAGGGCAAGCTG | 60.045 | 66.667 | 0.00 | 0.00 | 0.00 | 4.24 |
4823 | 5613 | 3.993081 | GCAGCATATCACCTGATGTACTC | 59.007 | 47.826 | 0.00 | 0.00 | 36.05 | 2.59 |
5212 | 6042 | 4.644685 | ACAATATATGTGTTGAACAGCCCC | 59.355 | 41.667 | 0.00 | 0.00 | 43.64 | 5.80 |
5226 | 6056 | 1.338020 | CAGCCCCTTTTCTTGTGTCAC | 59.662 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
5244 | 6074 | 3.760684 | GTCACAAAATTCATCCAGCTCCT | 59.239 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
5245 | 6075 | 4.012374 | TCACAAAATTCATCCAGCTCCTC | 58.988 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
5246 | 6076 | 3.129988 | CACAAAATTCATCCAGCTCCTCC | 59.870 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
5343 | 6250 | 9.381038 | TGTAAGCCTTATTAATATCTCCACTCT | 57.619 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
5346 | 6253 | 8.497910 | AGCCTTATTAATATCTCCACTCTTCA | 57.502 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
5359 | 6266 | 0.947244 | CTCTTCAGTGCCACACAACC | 59.053 | 55.000 | 0.00 | 0.00 | 36.74 | 3.77 |
5411 | 6318 | 5.904941 | TGTGTTTTGAAGAGCATCATTTGT | 58.095 | 33.333 | 0.00 | 0.00 | 37.82 | 2.83 |
5431 | 6338 | 3.813166 | TGTTTGAAGTGGTAGCTAGCAAC | 59.187 | 43.478 | 26.22 | 19.11 | 35.24 | 4.17 |
5448 | 6365 | 8.875168 | AGCTAGCAACTATATTTCCTTACTCAT | 58.125 | 33.333 | 18.83 | 0.00 | 0.00 | 2.90 |
5474 | 6392 | 0.602905 | ACAACACTACGCTCCCTTGC | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
5479 | 6397 | 2.205074 | CACTACGCTCCCTTGCTTATG | 58.795 | 52.381 | 0.00 | 0.00 | 0.00 | 1.90 |
5490 | 6408 | 5.007682 | TCCCTTGCTTATGGAAAGTGTAAC | 58.992 | 41.667 | 0.00 | 0.00 | 0.00 | 2.50 |
5593 | 6514 | 0.901124 | AGAAGCATGAGAAGAGCGGT | 59.099 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
5610 | 6531 | 0.905357 | GGTGGGTGCTGTCAGTAGAT | 59.095 | 55.000 | 0.93 | 0.00 | 0.00 | 1.98 |
5759 | 6686 | 2.362077 | ACTTGAGGTTTTGGTGTGATGC | 59.638 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
5795 | 6723 | 5.771165 | GGGGAATTAGTTGACCTGTACAAAA | 59.229 | 40.000 | 0.00 | 0.00 | 0.00 | 2.44 |
5796 | 6724 | 6.265876 | GGGGAATTAGTTGACCTGTACAAAAA | 59.734 | 38.462 | 0.00 | 0.00 | 0.00 | 1.94 |
5816 | 6744 | 3.801114 | AAGAAAAGAAGCCGCTGTTTT | 57.199 | 38.095 | 11.69 | 11.69 | 0.00 | 2.43 |
5857 | 6785 | 4.437390 | GGTTTGCTGATTGTAATGAGGTCG | 60.437 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
5858 | 6786 | 3.885724 | TGCTGATTGTAATGAGGTCGA | 57.114 | 42.857 | 0.00 | 0.00 | 0.00 | 4.20 |
5967 | 6896 | 6.877611 | TCTGGTTTCAGTTGGTATCTTTTC | 57.122 | 37.500 | 0.00 | 0.00 | 41.59 | 2.29 |
5974 | 6903 | 5.235516 | TCAGTTGGTATCTTTTCGTTCTCC | 58.764 | 41.667 | 0.00 | 0.00 | 0.00 | 3.71 |
5983 | 6912 | 2.845363 | TTTCGTTCTCCCTGTAACCC | 57.155 | 50.000 | 0.00 | 0.00 | 0.00 | 4.11 |
6002 | 6935 | 2.945668 | CCCCTTCATGATCTTCGGTTTC | 59.054 | 50.000 | 0.00 | 0.00 | 0.00 | 2.78 |
6005 | 6938 | 4.141711 | CCCTTCATGATCTTCGGTTTCCTA | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 2.94 |
6029 | 6962 | 6.455360 | TGGAATTTTCATCTGTTATCCTGC | 57.545 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
6037 | 6970 | 1.134699 | TCTGTTATCCTGCTGAAGCCG | 60.135 | 52.381 | 0.00 | 0.00 | 41.18 | 5.52 |
6061 | 6994 | 0.249699 | ATCGTGTCTTGCCGTGACAA | 60.250 | 50.000 | 5.34 | 0.00 | 44.63 | 3.18 |
6068 | 7001 | 1.065401 | TCTTGCCGTGACAAAGCTTTG | 59.935 | 47.619 | 32.53 | 32.53 | 43.62 | 2.77 |
6143 | 7097 | 4.100035 | TGCATCCAACTCTTGTATCGATCT | 59.900 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
6159 | 7113 | 2.359214 | CGATCTGAGTACTGGCTAGCAA | 59.641 | 50.000 | 18.24 | 3.74 | 0.00 | 3.91 |
6160 | 7114 | 3.549827 | CGATCTGAGTACTGGCTAGCAAG | 60.550 | 52.174 | 18.06 | 18.06 | 0.00 | 4.01 |
6161 | 7115 | 2.103373 | TCTGAGTACTGGCTAGCAAGG | 58.897 | 52.381 | 23.20 | 11.16 | 0.00 | 3.61 |
6229 | 7195 | 1.269361 | ACTGCATCGTGTTCACGTACA | 60.269 | 47.619 | 21.61 | 16.82 | 0.00 | 2.90 |
6256 | 7227 | 0.597118 | TGCATTGTTGGTTCTTGCGC | 60.597 | 50.000 | 0.00 | 0.00 | 36.11 | 6.09 |
6280 | 7251 | 2.966309 | GAACGCCGGCAGGACAAAG | 61.966 | 63.158 | 28.98 | 9.93 | 41.02 | 2.77 |
6313 | 7284 | 2.988839 | GCTCCCAGCCCAGGAACAT | 61.989 | 63.158 | 0.00 | 0.00 | 34.48 | 2.71 |
6350 | 7321 | 1.154225 | GCGACCAATGGCGTTTCTG | 60.154 | 57.895 | 15.18 | 0.00 | 0.00 | 3.02 |
6351 | 7322 | 1.501741 | CGACCAATGGCGTTTCTGG | 59.498 | 57.895 | 0.00 | 0.00 | 34.95 | 3.86 |
6352 | 7323 | 1.212751 | GACCAATGGCGTTTCTGGC | 59.787 | 57.895 | 0.00 | 0.00 | 31.74 | 4.85 |
6371 | 7342 | 0.250295 | CCTCTGCACGGACAAAGGAA | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
6372 | 7343 | 0.868406 | CTCTGCACGGACAAAGGAAC | 59.132 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
6375 | 7346 | 0.950836 | TGCACGGACAAAGGAACATG | 59.049 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
6376 | 7347 | 0.951558 | GCACGGACAAAGGAACATGT | 59.048 | 50.000 | 0.00 | 0.00 | 33.46 | 3.21 |
6377 | 7348 | 2.147958 | GCACGGACAAAGGAACATGTA | 58.852 | 47.619 | 0.00 | 0.00 | 31.00 | 2.29 |
6378 | 7349 | 2.747446 | GCACGGACAAAGGAACATGTAT | 59.253 | 45.455 | 0.00 | 0.00 | 31.00 | 2.29 |
6379 | 7350 | 3.181510 | GCACGGACAAAGGAACATGTATC | 60.182 | 47.826 | 0.00 | 0.00 | 31.00 | 2.24 |
6380 | 7351 | 3.374058 | CACGGACAAAGGAACATGTATCC | 59.626 | 47.826 | 15.33 | 15.33 | 37.22 | 2.59 |
6408 | 7391 | 1.726853 | CGGACCAGTTTCATCAGGAC | 58.273 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
6418 | 7407 | 3.574284 | TTCATCAGGACAAAAATGCGG | 57.426 | 42.857 | 0.00 | 0.00 | 0.00 | 5.69 |
6465 | 7463 | 9.771534 | ACTAAATTAGTAGAGTAGTAGTACCCG | 57.228 | 37.037 | 3.48 | 0.00 | 37.23 | 5.28 |
6507 | 7508 | 5.741388 | ACTCTTAAGACTGTTGCACAAAG | 57.259 | 39.130 | 0.00 | 0.00 | 0.00 | 2.77 |
6555 | 7556 | 1.668151 | GGCCAGTTCACGTGAGACC | 60.668 | 63.158 | 19.11 | 12.63 | 0.00 | 3.85 |
6556 | 7557 | 1.668151 | GCCAGTTCACGTGAGACCC | 60.668 | 63.158 | 19.11 | 8.27 | 0.00 | 4.46 |
6557 | 7558 | 2.050269 | CCAGTTCACGTGAGACCCT | 58.950 | 57.895 | 19.11 | 10.40 | 0.00 | 4.34 |
6558 | 7559 | 0.038159 | CCAGTTCACGTGAGACCCTC | 60.038 | 60.000 | 19.11 | 6.59 | 0.00 | 4.30 |
6559 | 7560 | 0.673985 | CAGTTCACGTGAGACCCTCA | 59.326 | 55.000 | 19.11 | 0.00 | 38.25 | 3.86 |
6560 | 7561 | 1.068588 | CAGTTCACGTGAGACCCTCAA | 59.931 | 52.381 | 19.11 | 0.00 | 42.46 | 3.02 |
6561 | 7562 | 1.068741 | AGTTCACGTGAGACCCTCAAC | 59.931 | 52.381 | 19.11 | 11.27 | 42.46 | 3.18 |
6562 | 7563 | 1.068741 | GTTCACGTGAGACCCTCAACT | 59.931 | 52.381 | 19.11 | 0.00 | 42.46 | 3.16 |
6563 | 7564 | 1.410004 | TCACGTGAGACCCTCAACTT | 58.590 | 50.000 | 15.76 | 0.00 | 42.46 | 2.66 |
6564 | 7565 | 1.068588 | TCACGTGAGACCCTCAACTTG | 59.931 | 52.381 | 15.76 | 0.00 | 42.46 | 3.16 |
6565 | 7566 | 1.120530 | ACGTGAGACCCTCAACTTGT | 58.879 | 50.000 | 0.00 | 0.00 | 42.46 | 3.16 |
6566 | 7567 | 1.202533 | ACGTGAGACCCTCAACTTGTG | 60.203 | 52.381 | 0.00 | 0.00 | 42.46 | 3.33 |
6567 | 7568 | 1.202533 | CGTGAGACCCTCAACTTGTGT | 60.203 | 52.381 | 0.00 | 0.00 | 42.46 | 3.72 |
6568 | 7569 | 2.035449 | CGTGAGACCCTCAACTTGTGTA | 59.965 | 50.000 | 0.00 | 0.00 | 42.46 | 2.90 |
6569 | 7570 | 3.391049 | GTGAGACCCTCAACTTGTGTAC | 58.609 | 50.000 | 0.00 | 0.00 | 42.46 | 2.90 |
6570 | 7571 | 2.367567 | TGAGACCCTCAACTTGTGTACC | 59.632 | 50.000 | 0.00 | 0.00 | 37.57 | 3.34 |
6571 | 7572 | 2.367567 | GAGACCCTCAACTTGTGTACCA | 59.632 | 50.000 | 0.00 | 0.00 | 0.00 | 3.25 |
6572 | 7573 | 2.979678 | AGACCCTCAACTTGTGTACCAT | 59.020 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
6573 | 7574 | 3.008049 | AGACCCTCAACTTGTGTACCATC | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
6574 | 7575 | 2.979678 | ACCCTCAACTTGTGTACCATCT | 59.020 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
6575 | 7576 | 3.008049 | ACCCTCAACTTGTGTACCATCTC | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 2.75 |
6576 | 7577 | 3.600388 | CCTCAACTTGTGTACCATCTCC | 58.400 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
6577 | 7578 | 3.600388 | CTCAACTTGTGTACCATCTCCC | 58.400 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6578 | 7579 | 3.248024 | TCAACTTGTGTACCATCTCCCT | 58.752 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
6579 | 7580 | 3.650942 | TCAACTTGTGTACCATCTCCCTT | 59.349 | 43.478 | 0.00 | 0.00 | 0.00 | 3.95 |
6580 | 7581 | 3.703001 | ACTTGTGTACCATCTCCCTTG | 57.297 | 47.619 | 0.00 | 0.00 | 0.00 | 3.61 |
6581 | 7582 | 2.979678 | ACTTGTGTACCATCTCCCTTGT | 59.020 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
6582 | 7583 | 3.008049 | ACTTGTGTACCATCTCCCTTGTC | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
6583 | 7584 | 2.902608 | TGTGTACCATCTCCCTTGTCT | 58.097 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
6584 | 7585 | 4.055710 | TGTGTACCATCTCCCTTGTCTA | 57.944 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
6585 | 7586 | 3.767673 | TGTGTACCATCTCCCTTGTCTAC | 59.232 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
6586 | 7587 | 4.024670 | GTGTACCATCTCCCTTGTCTACT | 58.975 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
6587 | 7588 | 4.023980 | TGTACCATCTCCCTTGTCTACTG | 58.976 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
6588 | 7589 | 2.472029 | ACCATCTCCCTTGTCTACTGG | 58.528 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
6589 | 7590 | 1.139853 | CCATCTCCCTTGTCTACTGGC | 59.860 | 57.143 | 0.00 | 0.00 | 0.00 | 4.85 |
6590 | 7591 | 2.114616 | CATCTCCCTTGTCTACTGGCT | 58.885 | 52.381 | 0.00 | 0.00 | 0.00 | 4.75 |
6591 | 7592 | 3.300388 | CATCTCCCTTGTCTACTGGCTA | 58.700 | 50.000 | 0.00 | 0.00 | 0.00 | 3.93 |
6592 | 7593 | 2.736347 | TCTCCCTTGTCTACTGGCTAC | 58.264 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
6593 | 7594 | 2.312140 | TCTCCCTTGTCTACTGGCTACT | 59.688 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6594 | 7595 | 2.428890 | CTCCCTTGTCTACTGGCTACTG | 59.571 | 54.545 | 0.00 | 0.00 | 0.00 | 2.74 |
6595 | 7596 | 1.134670 | CCCTTGTCTACTGGCTACTGC | 60.135 | 57.143 | 0.00 | 0.00 | 38.76 | 4.40 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
46 | 47 | 2.152830 | CGGGGTGGACGTGAATAAAAA | 58.847 | 47.619 | 0.00 | 0.00 | 0.00 | 1.94 |
47 | 48 | 1.611148 | CCGGGGTGGACGTGAATAAAA | 60.611 | 52.381 | 0.00 | 0.00 | 42.00 | 1.52 |
48 | 49 | 0.036199 | CCGGGGTGGACGTGAATAAA | 60.036 | 55.000 | 0.00 | 0.00 | 42.00 | 1.40 |
49 | 50 | 0.903924 | TCCGGGGTGGACGTGAATAA | 60.904 | 55.000 | 0.00 | 0.00 | 43.74 | 1.40 |
50 | 51 | 1.305129 | TCCGGGGTGGACGTGAATA | 60.305 | 57.895 | 0.00 | 0.00 | 43.74 | 1.75 |
51 | 52 | 2.605295 | TCCGGGGTGGACGTGAAT | 60.605 | 61.111 | 0.00 | 0.00 | 43.74 | 2.57 |
59 | 60 | 1.901464 | CAAAACCTGTCCGGGGTGG | 60.901 | 63.158 | 0.00 | 3.57 | 37.13 | 4.61 |
60 | 61 | 1.901464 | CCAAAACCTGTCCGGGGTG | 60.901 | 63.158 | 0.00 | 0.00 | 37.13 | 4.61 |
61 | 62 | 2.518933 | CCAAAACCTGTCCGGGGT | 59.481 | 61.111 | 0.00 | 0.00 | 38.94 | 4.95 |
62 | 63 | 2.282887 | CCCAAAACCTGTCCGGGG | 60.283 | 66.667 | 0.00 | 0.00 | 36.97 | 5.73 |
63 | 64 | 2.282887 | CCCCAAAACCTGTCCGGG | 60.283 | 66.667 | 0.00 | 0.00 | 36.97 | 5.73 |
64 | 65 | 1.901464 | CACCCCAAAACCTGTCCGG | 60.901 | 63.158 | 0.00 | 0.00 | 39.35 | 5.14 |
65 | 66 | 2.561037 | GCACCCCAAAACCTGTCCG | 61.561 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
66 | 67 | 2.561037 | CGCACCCCAAAACCTGTCC | 61.561 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
67 | 68 | 2.561037 | CCGCACCCCAAAACCTGTC | 61.561 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
68 | 69 | 2.520741 | CCGCACCCCAAAACCTGT | 60.521 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
69 | 70 | 3.989787 | GCCGCACCCCAAAACCTG | 61.990 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
107 | 108 | 2.305127 | CGTGTTTGTCCGACGGGTC | 61.305 | 63.158 | 15.25 | 8.48 | 33.83 | 4.46 |
108 | 109 | 2.279650 | CGTGTTTGTCCGACGGGT | 60.280 | 61.111 | 15.25 | 0.00 | 33.83 | 5.28 |
111 | 112 | 0.942410 | ATGTCCGTGTTTGTCCGACG | 60.942 | 55.000 | 0.00 | 0.00 | 0.00 | 5.12 |
112 | 113 | 0.511221 | CATGTCCGTGTTTGTCCGAC | 59.489 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
113 | 114 | 0.601576 | CCATGTCCGTGTTTGTCCGA | 60.602 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
114 | 115 | 1.573829 | CCCATGTCCGTGTTTGTCCG | 61.574 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
115 | 116 | 1.862602 | GCCCATGTCCGTGTTTGTCC | 61.863 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
116 | 117 | 1.579429 | GCCCATGTCCGTGTTTGTC | 59.421 | 57.895 | 0.00 | 0.00 | 0.00 | 3.18 |
117 | 118 | 1.901464 | GGCCCATGTCCGTGTTTGT | 60.901 | 57.895 | 0.00 | 0.00 | 0.00 | 2.83 |
118 | 119 | 1.900981 | TGGCCCATGTCCGTGTTTG | 60.901 | 57.895 | 0.00 | 0.00 | 0.00 | 2.93 |
119 | 120 | 1.901464 | GTGGCCCATGTCCGTGTTT | 60.901 | 57.895 | 0.00 | 0.00 | 0.00 | 2.83 |
120 | 121 | 2.282180 | GTGGCCCATGTCCGTGTT | 60.282 | 61.111 | 0.00 | 0.00 | 0.00 | 3.32 |
121 | 122 | 4.344865 | GGTGGCCCATGTCCGTGT | 62.345 | 66.667 | 0.00 | 0.00 | 0.00 | 4.49 |
122 | 123 | 3.976701 | GAGGTGGCCCATGTCCGTG | 62.977 | 68.421 | 0.00 | 0.00 | 0.00 | 4.94 |
123 | 124 | 3.717294 | GAGGTGGCCCATGTCCGT | 61.717 | 66.667 | 0.00 | 0.00 | 0.00 | 4.69 |
124 | 125 | 2.556840 | AATGAGGTGGCCCATGTCCG | 62.557 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
125 | 126 | 1.039233 | CAATGAGGTGGCCCATGTCC | 61.039 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
126 | 127 | 1.669999 | GCAATGAGGTGGCCCATGTC | 61.670 | 60.000 | 0.00 | 0.00 | 0.00 | 3.06 |
127 | 128 | 1.683365 | GCAATGAGGTGGCCCATGT | 60.683 | 57.895 | 0.00 | 0.00 | 0.00 | 3.21 |
128 | 129 | 2.428925 | GGCAATGAGGTGGCCCATG | 61.429 | 63.158 | 0.00 | 0.00 | 41.90 | 3.66 |
129 | 130 | 2.042639 | GGCAATGAGGTGGCCCAT | 60.043 | 61.111 | 0.00 | 0.00 | 41.90 | 4.00 |
130 | 131 | 4.738998 | CGGCAATGAGGTGGCCCA | 62.739 | 66.667 | 0.00 | 0.00 | 44.90 | 5.36 |
131 | 132 | 4.740822 | ACGGCAATGAGGTGGCCC | 62.741 | 66.667 | 0.00 | 0.00 | 44.90 | 5.80 |
132 | 133 | 3.134127 | GACGGCAATGAGGTGGCC | 61.134 | 66.667 | 0.00 | 0.00 | 44.27 | 5.36 |
133 | 134 | 3.134127 | GGACGGCAATGAGGTGGC | 61.134 | 66.667 | 0.00 | 0.00 | 40.55 | 5.01 |
134 | 135 | 2.438434 | GGGACGGCAATGAGGTGG | 60.438 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
135 | 136 | 0.893270 | TTTGGGACGGCAATGAGGTG | 60.893 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
136 | 137 | 0.893727 | GTTTGGGACGGCAATGAGGT | 60.894 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
137 | 138 | 1.883021 | GTTTGGGACGGCAATGAGG | 59.117 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
176 | 177 | 2.735857 | CGACCCAAACGGACGTCC | 60.736 | 66.667 | 25.28 | 25.28 | 43.65 | 4.79 |
184 | 185 | 2.115533 | TTTTACCGCGCGACCCAAAC | 62.116 | 55.000 | 34.63 | 0.00 | 0.00 | 2.93 |
185 | 186 | 1.235948 | ATTTTACCGCGCGACCCAAA | 61.236 | 50.000 | 34.63 | 22.79 | 0.00 | 3.28 |
186 | 187 | 1.235948 | AATTTTACCGCGCGACCCAA | 61.236 | 50.000 | 34.63 | 18.59 | 0.00 | 4.12 |
187 | 188 | 1.671704 | AATTTTACCGCGCGACCCA | 60.672 | 52.632 | 34.63 | 11.47 | 0.00 | 4.51 |
188 | 189 | 1.226184 | CAATTTTACCGCGCGACCC | 60.226 | 57.895 | 34.63 | 0.00 | 0.00 | 4.46 |
189 | 190 | 1.226184 | CCAATTTTACCGCGCGACC | 60.226 | 57.895 | 34.63 | 0.00 | 0.00 | 4.79 |
190 | 191 | 1.866059 | GCCAATTTTACCGCGCGAC | 60.866 | 57.895 | 34.63 | 0.00 | 0.00 | 5.19 |
191 | 192 | 2.481464 | GCCAATTTTACCGCGCGA | 59.519 | 55.556 | 34.63 | 11.85 | 0.00 | 5.87 |
192 | 193 | 2.536323 | AAGGCCAATTTTACCGCGCG | 62.536 | 55.000 | 25.67 | 25.67 | 0.00 | 6.86 |
193 | 194 | 0.452585 | TAAGGCCAATTTTACCGCGC | 59.547 | 50.000 | 5.01 | 0.00 | 0.00 | 6.86 |
194 | 195 | 1.469308 | TGTAAGGCCAATTTTACCGCG | 59.531 | 47.619 | 5.01 | 0.00 | 0.00 | 6.46 |
195 | 196 | 2.729778 | CGTGTAAGGCCAATTTTACCGC | 60.730 | 50.000 | 5.01 | 0.35 | 0.00 | 5.68 |
196 | 197 | 2.485038 | ACGTGTAAGGCCAATTTTACCG | 59.515 | 45.455 | 5.01 | 12.51 | 33.60 | 4.02 |
197 | 198 | 4.508461 | AACGTGTAAGGCCAATTTTACC | 57.492 | 40.909 | 5.01 | 0.00 | 0.00 | 2.85 |
198 | 199 | 4.682401 | CCAAACGTGTAAGGCCAATTTTAC | 59.318 | 41.667 | 5.01 | 5.52 | 0.00 | 2.01 |
199 | 200 | 4.583489 | TCCAAACGTGTAAGGCCAATTTTA | 59.417 | 37.500 | 5.01 | 0.00 | 0.00 | 1.52 |
200 | 201 | 3.385111 | TCCAAACGTGTAAGGCCAATTTT | 59.615 | 39.130 | 5.01 | 0.00 | 0.00 | 1.82 |
201 | 202 | 2.959707 | TCCAAACGTGTAAGGCCAATTT | 59.040 | 40.909 | 5.01 | 0.00 | 0.00 | 1.82 |
202 | 203 | 2.556622 | CTCCAAACGTGTAAGGCCAATT | 59.443 | 45.455 | 5.01 | 0.00 | 0.00 | 2.32 |
203 | 204 | 2.159382 | CTCCAAACGTGTAAGGCCAAT | 58.841 | 47.619 | 5.01 | 0.00 | 0.00 | 3.16 |
204 | 205 | 1.134037 | ACTCCAAACGTGTAAGGCCAA | 60.134 | 47.619 | 5.01 | 0.00 | 0.00 | 4.52 |
205 | 206 | 0.470766 | ACTCCAAACGTGTAAGGCCA | 59.529 | 50.000 | 5.01 | 0.00 | 0.00 | 5.36 |
206 | 207 | 1.534163 | GAACTCCAAACGTGTAAGGCC | 59.466 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
207 | 208 | 2.032290 | GTGAACTCCAAACGTGTAAGGC | 60.032 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
208 | 209 | 2.546789 | GGTGAACTCCAAACGTGTAAGG | 59.453 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
209 | 210 | 3.199677 | TGGTGAACTCCAAACGTGTAAG | 58.800 | 45.455 | 0.00 | 0.00 | 34.24 | 2.34 |
217 | 218 | 4.819630 | GTCACATTACTGGTGAACTCCAAA | 59.180 | 41.667 | 0.00 | 0.00 | 45.96 | 3.28 |
234 | 235 | 2.202570 | GCGCGTAGGTCGTCACAT | 60.203 | 61.111 | 8.43 | 0.00 | 42.13 | 3.21 |
238 | 239 | 4.247612 | ATCGGCGCGTAGGTCGTC | 62.248 | 66.667 | 8.43 | 0.00 | 42.13 | 4.20 |
486 | 527 | 1.434555 | TGCGATCGATTTGTTTCGGT | 58.565 | 45.000 | 21.57 | 0.00 | 39.56 | 4.69 |
509 | 550 | 1.557269 | GCAGTGGACTGGACTGGGAT | 61.557 | 60.000 | 8.82 | 0.00 | 43.94 | 3.85 |
511 | 552 | 2.348998 | GCAGTGGACTGGACTGGG | 59.651 | 66.667 | 8.82 | 0.00 | 43.94 | 4.45 |
595 | 636 | 2.123033 | GGGAGAGAGGGAGGAGGC | 60.123 | 72.222 | 0.00 | 0.00 | 0.00 | 4.70 |
609 | 650 | 0.906775 | AAGGGAATAAAGCGACGGGA | 59.093 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
611 | 652 | 1.296727 | GGAAGGGAATAAAGCGACGG | 58.703 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
612 | 653 | 1.296727 | GGGAAGGGAATAAAGCGACG | 58.703 | 55.000 | 0.00 | 0.00 | 0.00 | 5.12 |
613 | 654 | 1.212195 | AGGGGAAGGGAATAAAGCGAC | 59.788 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
614 | 655 | 1.591768 | AGGGGAAGGGAATAAAGCGA | 58.408 | 50.000 | 0.00 | 0.00 | 0.00 | 4.93 |
920 | 961 | 0.320946 | TCGCGAAACGGAAGGGAAAT | 60.321 | 50.000 | 6.20 | 0.00 | 43.89 | 2.17 |
921 | 962 | 0.320946 | ATCGCGAAACGGAAGGGAAA | 60.321 | 50.000 | 15.24 | 0.00 | 43.89 | 3.13 |
922 | 963 | 0.320946 | AATCGCGAAACGGAAGGGAA | 60.321 | 50.000 | 15.24 | 0.00 | 43.89 | 3.97 |
923 | 964 | 0.738412 | GAATCGCGAAACGGAAGGGA | 60.738 | 55.000 | 15.24 | 0.00 | 43.89 | 4.20 |
924 | 965 | 1.713830 | GAATCGCGAAACGGAAGGG | 59.286 | 57.895 | 15.24 | 0.00 | 43.89 | 3.95 |
925 | 966 | 1.343821 | CGAATCGCGAAACGGAAGG | 59.656 | 57.895 | 23.55 | 2.55 | 44.57 | 3.46 |
926 | 967 | 4.925786 | CGAATCGCGAAACGGAAG | 57.074 | 55.556 | 23.55 | 5.76 | 44.57 | 3.46 |
1114 | 1258 | 1.608336 | TGGGGGAGATGTCGTCGTT | 60.608 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
1144 | 1288 | 1.027815 | AGGGAGGGAGGTGAGGTAAT | 58.972 | 55.000 | 0.00 | 0.00 | 0.00 | 1.89 |
1200 | 1357 | 3.649277 | CTGTCTCCAAGTCGGGGCG | 62.649 | 68.421 | 0.00 | 0.00 | 33.78 | 6.13 |
1263 | 1429 | 0.594602 | CGGAATCGGATGGCTACGTA | 59.405 | 55.000 | 0.00 | 0.00 | 0.00 | 3.57 |
1265 | 1431 | 4.245054 | CGGAATCGGATGGCTACG | 57.755 | 61.111 | 0.00 | 0.00 | 0.00 | 3.51 |
1315 | 1481 | 4.212004 | CGCAACGAAATCTGATGGTATGAT | 59.788 | 41.667 | 0.00 | 0.00 | 0.00 | 2.45 |
1366 | 1536 | 4.516698 | CCCAACAACTATCATCTGCATACC | 59.483 | 45.833 | 0.00 | 0.00 | 0.00 | 2.73 |
1367 | 1537 | 4.516698 | CCCCAACAACTATCATCTGCATAC | 59.483 | 45.833 | 0.00 | 0.00 | 0.00 | 2.39 |
1368 | 1538 | 4.446167 | CCCCCAACAACTATCATCTGCATA | 60.446 | 45.833 | 0.00 | 0.00 | 0.00 | 3.14 |
1369 | 1539 | 3.559069 | CCCCAACAACTATCATCTGCAT | 58.441 | 45.455 | 0.00 | 0.00 | 0.00 | 3.96 |
1370 | 1540 | 2.357050 | CCCCCAACAACTATCATCTGCA | 60.357 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
1372 | 1542 | 3.931907 | TCCCCCAACAACTATCATCTG | 57.068 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
1478 | 1663 | 5.751243 | AGCAATTAATAAGCAGTTACGGG | 57.249 | 39.130 | 13.38 | 0.00 | 0.00 | 5.28 |
1514 | 1705 | 1.953686 | TCCAAGTTGGTTAGCTGCAAC | 59.046 | 47.619 | 21.35 | 4.48 | 39.03 | 4.17 |
1515 | 1706 | 1.953686 | GTCCAAGTTGGTTAGCTGCAA | 59.046 | 47.619 | 21.35 | 0.00 | 39.03 | 4.08 |
1516 | 1707 | 1.604604 | GTCCAAGTTGGTTAGCTGCA | 58.395 | 50.000 | 21.35 | 0.00 | 39.03 | 4.41 |
1517 | 1708 | 0.881796 | GGTCCAAGTTGGTTAGCTGC | 59.118 | 55.000 | 21.35 | 0.00 | 39.03 | 5.25 |
1518 | 1709 | 1.880027 | GTGGTCCAAGTTGGTTAGCTG | 59.120 | 52.381 | 21.35 | 0.00 | 39.03 | 4.24 |
1519 | 1710 | 1.774856 | AGTGGTCCAAGTTGGTTAGCT | 59.225 | 47.619 | 21.35 | 12.59 | 39.03 | 3.32 |
1520 | 1711 | 2.271944 | AGTGGTCCAAGTTGGTTAGC | 57.728 | 50.000 | 21.35 | 13.11 | 39.03 | 3.09 |
1521 | 1712 | 3.146847 | GGAAGTGGTCCAAGTTGGTTAG | 58.853 | 50.000 | 21.35 | 0.00 | 46.97 | 2.34 |
1524 | 1716 | 3.821306 | GGAAGTGGTCCAAGTTGGT | 57.179 | 52.632 | 21.35 | 0.53 | 46.97 | 3.67 |
1547 | 1740 | 4.708177 | TCAGGCAGGAATAGCTGAAATAC | 58.292 | 43.478 | 0.00 | 0.00 | 0.00 | 1.89 |
1568 | 1761 | 9.140286 | GCTCAAGGTTCCTTTAAATAAATGTTC | 57.860 | 33.333 | 0.86 | 0.00 | 0.00 | 3.18 |
1612 | 1840 | 3.476552 | CCTCTAGCAAAGGAACACACAA | 58.523 | 45.455 | 0.00 | 0.00 | 35.83 | 3.33 |
1617 | 1845 | 6.277536 | TTTCCAGCCTCTAGCAAAGGAACA | 62.278 | 45.833 | 0.12 | 0.00 | 44.04 | 3.18 |
1618 | 1846 | 3.810743 | TTTCCAGCCTCTAGCAAAGGAAC | 60.811 | 47.826 | 0.12 | 0.00 | 44.04 | 3.62 |
1628 | 1856 | 1.276421 | GCACTGAGTTTCCAGCCTCTA | 59.724 | 52.381 | 0.00 | 0.00 | 37.68 | 2.43 |
1641 | 1869 | 2.864946 | GCATACACATCTCTGCACTGAG | 59.135 | 50.000 | 0.00 | 0.00 | 34.77 | 3.35 |
1650 | 1878 | 4.273480 | GGTAACCACATGCATACACATCTC | 59.727 | 45.833 | 0.00 | 0.00 | 0.00 | 2.75 |
1652 | 1880 | 3.944650 | TGGTAACCACATGCATACACATC | 59.055 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
1660 | 1888 | 7.286313 | TCTATGAAATATGGTAACCACATGCA | 58.714 | 34.615 | 0.00 | 0.00 | 35.80 | 3.96 |
1664 | 1892 | 8.325787 | AGTGTTCTATGAAATATGGTAACCACA | 58.674 | 33.333 | 0.00 | 0.00 | 35.80 | 4.17 |
1665 | 1893 | 8.732746 | AGTGTTCTATGAAATATGGTAACCAC | 57.267 | 34.615 | 0.00 | 0.00 | 35.80 | 4.16 |
1672 | 1900 | 9.613428 | TTTGTCCTAGTGTTCTATGAAATATGG | 57.387 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
1676 | 1904 | 9.178758 | GGATTTTGTCCTAGTGTTCTATGAAAT | 57.821 | 33.333 | 0.00 | 0.00 | 44.16 | 2.17 |
1677 | 1905 | 7.333423 | CGGATTTTGTCCTAGTGTTCTATGAAA | 59.667 | 37.037 | 0.00 | 0.00 | 45.46 | 2.69 |
1681 | 1926 | 5.671493 | CCGGATTTTGTCCTAGTGTTCTAT | 58.329 | 41.667 | 0.00 | 0.00 | 45.46 | 1.98 |
1684 | 1929 | 2.418976 | GCCGGATTTTGTCCTAGTGTTC | 59.581 | 50.000 | 5.05 | 0.00 | 45.46 | 3.18 |
1701 | 1946 | 2.813908 | CGAGAAAAGGACGGCCGG | 60.814 | 66.667 | 31.76 | 11.88 | 39.96 | 6.13 |
1707 | 1952 | 4.015764 | ACTAGTACCTCCGAGAAAAGGAC | 58.984 | 47.826 | 0.00 | 0.00 | 36.46 | 3.85 |
1720 | 1965 | 1.959028 | GCCTGGTCGGAACTAGTACCT | 60.959 | 57.143 | 12.66 | 0.00 | 32.36 | 3.08 |
1722 | 1967 | 1.135170 | GTGCCTGGTCGGAACTAGTAC | 60.135 | 57.143 | 0.00 | 0.00 | 38.44 | 2.73 |
1752 | 1997 | 0.771127 | AACTAGGGGCACTTTCAGCA | 59.229 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
1753 | 1998 | 1.454201 | GAACTAGGGGCACTTTCAGC | 58.546 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1787 | 2032 | 6.806751 | ACATTATATTATCGGACGGATGGAG | 58.193 | 40.000 | 5.80 | 0.00 | 36.55 | 3.86 |
1788 | 2033 | 6.785337 | ACATTATATTATCGGACGGATGGA | 57.215 | 37.500 | 5.80 | 0.00 | 36.55 | 3.41 |
1789 | 2034 | 7.648112 | CACTACATTATATTATCGGACGGATGG | 59.352 | 40.741 | 5.80 | 0.00 | 36.55 | 3.51 |
1790 | 2035 | 8.188799 | ACACTACATTATATTATCGGACGGATG | 58.811 | 37.037 | 5.80 | 0.00 | 36.55 | 3.51 |
1791 | 2036 | 8.289939 | ACACTACATTATATTATCGGACGGAT | 57.710 | 34.615 | 0.81 | 0.81 | 39.25 | 4.18 |
1792 | 2037 | 7.391275 | TGACACTACATTATATTATCGGACGGA | 59.609 | 37.037 | 0.00 | 0.00 | 0.00 | 4.69 |
1793 | 2038 | 7.532571 | TGACACTACATTATATTATCGGACGG | 58.467 | 38.462 | 0.00 | 0.00 | 0.00 | 4.79 |
1794 | 2039 | 8.959734 | TTGACACTACATTATATTATCGGACG | 57.040 | 34.615 | 0.00 | 0.00 | 0.00 | 4.79 |
1802 | 2047 | 9.982651 | AGAGCGTATTTGACACTACATTATATT | 57.017 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
1803 | 2048 | 9.982651 | AAGAGCGTATTTGACACTACATTATAT | 57.017 | 29.630 | 0.00 | 0.00 | 0.00 | 0.86 |
1805 | 2050 | 9.982651 | ATAAGAGCGTATTTGACACTACATTAT | 57.017 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
1807 | 2052 | 9.982651 | ATATAAGAGCGTATTTGACACTACATT | 57.017 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
1808 | 2053 | 9.982651 | AATATAAGAGCGTATTTGACACTACAT | 57.017 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
1812 | 2057 | 9.424319 | CCATAATATAAGAGCGTATTTGACACT | 57.576 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
1813 | 2058 | 8.656849 | CCCATAATATAAGAGCGTATTTGACAC | 58.343 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
1814 | 2059 | 8.590204 | TCCCATAATATAAGAGCGTATTTGACA | 58.410 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
1815 | 2060 | 8.870879 | GTCCCATAATATAAGAGCGTATTTGAC | 58.129 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
1816 | 2061 | 7.758076 | CGTCCCATAATATAAGAGCGTATTTGA | 59.242 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
1817 | 2062 | 7.010183 | CCGTCCCATAATATAAGAGCGTATTTG | 59.990 | 40.741 | 0.00 | 0.00 | 0.00 | 2.32 |
1818 | 2063 | 7.039882 | CCGTCCCATAATATAAGAGCGTATTT | 58.960 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
1819 | 2064 | 6.379133 | TCCGTCCCATAATATAAGAGCGTATT | 59.621 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
1820 | 2065 | 5.889853 | TCCGTCCCATAATATAAGAGCGTAT | 59.110 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1821 | 2066 | 5.255687 | TCCGTCCCATAATATAAGAGCGTA | 58.744 | 41.667 | 0.00 | 0.00 | 0.00 | 4.42 |
1822 | 2067 | 4.084287 | TCCGTCCCATAATATAAGAGCGT | 58.916 | 43.478 | 0.00 | 0.00 | 0.00 | 5.07 |
1823 | 2068 | 4.440250 | CCTCCGTCCCATAATATAAGAGCG | 60.440 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
1824 | 2069 | 4.141914 | CCCTCCGTCCCATAATATAAGAGC | 60.142 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
1825 | 2070 | 5.269991 | TCCCTCCGTCCCATAATATAAGAG | 58.730 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
1826 | 2071 | 5.222484 | ACTCCCTCCGTCCCATAATATAAGA | 60.222 | 44.000 | 0.00 | 0.00 | 0.00 | 2.10 |
1827 | 2072 | 5.024118 | ACTCCCTCCGTCCCATAATATAAG | 58.976 | 45.833 | 0.00 | 0.00 | 0.00 | 1.73 |
1828 | 2073 | 5.019657 | ACTCCCTCCGTCCCATAATATAA | 57.980 | 43.478 | 0.00 | 0.00 | 0.00 | 0.98 |
1829 | 2074 | 4.687262 | ACTCCCTCCGTCCCATAATATA | 57.313 | 45.455 | 0.00 | 0.00 | 0.00 | 0.86 |
1830 | 2075 | 3.562108 | ACTCCCTCCGTCCCATAATAT | 57.438 | 47.619 | 0.00 | 0.00 | 0.00 | 1.28 |
1831 | 2076 | 3.816842 | GCTACTCCCTCCGTCCCATAATA | 60.817 | 52.174 | 0.00 | 0.00 | 0.00 | 0.98 |
1832 | 2077 | 2.890814 | CTACTCCCTCCGTCCCATAAT | 58.109 | 52.381 | 0.00 | 0.00 | 0.00 | 1.28 |
1833 | 2078 | 1.756690 | GCTACTCCCTCCGTCCCATAA | 60.757 | 57.143 | 0.00 | 0.00 | 0.00 | 1.90 |
1834 | 2079 | 0.178970 | GCTACTCCCTCCGTCCCATA | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 2.74 |
1835 | 2080 | 1.457831 | GCTACTCCCTCCGTCCCAT | 60.458 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
1836 | 2081 | 2.043248 | GCTACTCCCTCCGTCCCA | 60.043 | 66.667 | 0.00 | 0.00 | 0.00 | 4.37 |
1837 | 2082 | 1.262640 | TTTGCTACTCCCTCCGTCCC | 61.263 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
1838 | 2083 | 0.108281 | GTTTGCTACTCCCTCCGTCC | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1839 | 2084 | 0.606604 | TGTTTGCTACTCCCTCCGTC | 59.393 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1840 | 2085 | 1.276622 | ATGTTTGCTACTCCCTCCGT | 58.723 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
1841 | 2086 | 3.753294 | ATATGTTTGCTACTCCCTCCG | 57.247 | 47.619 | 0.00 | 0.00 | 0.00 | 4.63 |
1842 | 2087 | 5.763698 | GGTAAATATGTTTGCTACTCCCTCC | 59.236 | 44.000 | 3.27 | 0.00 | 31.53 | 4.30 |
1843 | 2088 | 5.763698 | GGGTAAATATGTTTGCTACTCCCTC | 59.236 | 44.000 | 3.27 | 0.00 | 31.53 | 4.30 |
1844 | 2089 | 5.432060 | AGGGTAAATATGTTTGCTACTCCCT | 59.568 | 40.000 | 3.27 | 0.00 | 31.53 | 4.20 |
1845 | 2090 | 5.531287 | CAGGGTAAATATGTTTGCTACTCCC | 59.469 | 44.000 | 3.27 | 0.00 | 31.53 | 4.30 |
1846 | 2091 | 6.354130 | TCAGGGTAAATATGTTTGCTACTCC | 58.646 | 40.000 | 3.27 | 0.00 | 31.53 | 3.85 |
1847 | 2092 | 7.715249 | TGATCAGGGTAAATATGTTTGCTACTC | 59.285 | 37.037 | 3.27 | 0.00 | 31.53 | 2.59 |
1848 | 2093 | 7.573710 | TGATCAGGGTAAATATGTTTGCTACT | 58.426 | 34.615 | 3.27 | 0.34 | 31.53 | 2.57 |
1849 | 2094 | 7.801716 | TGATCAGGGTAAATATGTTTGCTAC | 57.198 | 36.000 | 3.27 | 0.00 | 31.53 | 3.58 |
1850 | 2095 | 8.995027 | AATGATCAGGGTAAATATGTTTGCTA | 57.005 | 30.769 | 0.09 | 0.00 | 31.53 | 3.49 |
1851 | 2096 | 7.902920 | AATGATCAGGGTAAATATGTTTGCT | 57.097 | 32.000 | 0.09 | 0.00 | 31.53 | 3.91 |
1892 | 2137 | 2.938451 | CACTTTGAGCTGACACTGTGAA | 59.062 | 45.455 | 15.86 | 1.25 | 0.00 | 3.18 |
1894 | 2139 | 1.003116 | GCACTTTGAGCTGACACTGTG | 60.003 | 52.381 | 6.19 | 6.19 | 0.00 | 3.66 |
1901 | 2146 | 6.678655 | GCAAACATATATGCACTTTGAGCTGA | 60.679 | 38.462 | 22.16 | 0.00 | 42.12 | 4.26 |
1926 | 2172 | 5.170748 | GCATTTGGGTCCAGAAAATAACAG | 58.829 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
1938 | 2185 | 3.632643 | ATTCCAATTGCATTTGGGTCC | 57.367 | 42.857 | 30.44 | 0.00 | 45.21 | 4.46 |
1980 | 2228 | 4.806247 | GGCTGATATGGACATATAGAACGC | 59.194 | 45.833 | 4.88 | 4.32 | 34.36 | 4.84 |
2003 | 2251 | 4.083110 | ACATTTGATCGGCTCAGAAACTTG | 60.083 | 41.667 | 0.00 | 0.00 | 34.68 | 3.16 |
2111 | 2365 | 9.761504 | CACTTATACAAGAAGATGATCATGACT | 57.238 | 33.333 | 14.30 | 1.53 | 35.60 | 3.41 |
2112 | 2366 | 9.539825 | ACACTTATACAAGAAGATGATCATGAC | 57.460 | 33.333 | 14.30 | 0.00 | 35.60 | 3.06 |
2192 | 2446 | 1.885887 | CCCTGGAAAGAAATTGTCGCA | 59.114 | 47.619 | 0.00 | 0.00 | 0.00 | 5.10 |
2195 | 2449 | 2.562738 | CCACCCCTGGAAAGAAATTGTC | 59.437 | 50.000 | 0.00 | 0.00 | 40.55 | 3.18 |
2355 | 2609 | 1.851304 | TTGCCCCCAAAAGCATAGAG | 58.149 | 50.000 | 0.00 | 0.00 | 39.11 | 2.43 |
2540 | 2796 | 9.508567 | GAATGGAATGCAGTATTTTTCTAGAAC | 57.491 | 33.333 | 4.18 | 0.00 | 0.00 | 3.01 |
2552 | 2808 | 5.658634 | ACTCTCAGTAGAATGGAATGCAGTA | 59.341 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2587 | 2844 | 5.757320 | ACATGATACAGCAGAGAAGTATTGC | 59.243 | 40.000 | 0.00 | 0.00 | 38.09 | 3.56 |
2619 | 2876 | 9.656323 | AGGAACACCATTAGATACAATAGACTA | 57.344 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
2925 | 3182 | 2.680841 | AGTTGAGCACGCACAAAGTTTA | 59.319 | 40.909 | 3.42 | 0.00 | 0.00 | 2.01 |
2937 | 3194 | 1.227943 | TGGCACCAGAGTTGAGCAC | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
2985 | 3242 | 7.809806 | GGCATCTTGCTTGGTTTATATGAATAC | 59.190 | 37.037 | 0.00 | 0.00 | 44.28 | 1.89 |
2997 | 3254 | 2.025981 | TGAGTATGGCATCTTGCTTGGT | 60.026 | 45.455 | 1.65 | 0.00 | 44.28 | 3.67 |
3000 | 3257 | 5.530171 | CACTATTGAGTATGGCATCTTGCTT | 59.470 | 40.000 | 1.65 | 0.00 | 37.72 | 3.91 |
3037 | 3294 | 5.527582 | TGGCTAAACTTGAGAAGTCACTTTC | 59.472 | 40.000 | 0.00 | 0.00 | 41.91 | 2.62 |
3081 | 3338 | 4.715534 | TGACTATCAACTTGGTTGGGAA | 57.284 | 40.909 | 9.98 | 0.00 | 42.99 | 3.97 |
3083 | 3340 | 3.129287 | GCATGACTATCAACTTGGTTGGG | 59.871 | 47.826 | 9.98 | 4.68 | 42.99 | 4.12 |
3086 | 3343 | 5.072741 | ACAAGCATGACTATCAACTTGGTT | 58.927 | 37.500 | 20.26 | 8.75 | 43.27 | 3.67 |
3101 | 3358 | 6.092748 | GGAATGGTTACAACTAACAAGCATG | 58.907 | 40.000 | 0.00 | 0.00 | 39.56 | 4.06 |
3180 | 3437 | 7.588143 | AGTTCAATCAAGTATGACGAAGAAG | 57.412 | 36.000 | 0.00 | 0.00 | 38.69 | 2.85 |
3183 | 3440 | 7.011773 | CACAAGTTCAATCAAGTATGACGAAG | 58.988 | 38.462 | 0.00 | 0.00 | 38.69 | 3.79 |
3208 | 3465 | 5.047660 | AGTGAGGTGACATCTAAGTTCAGTC | 60.048 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3314 | 3571 | 9.981114 | AAAATGAAATACTGTAAGGGTTCTTTG | 57.019 | 29.630 | 0.00 | 0.00 | 39.30 | 2.77 |
3344 | 3632 | 2.844451 | GCTGCAACACCTTCCGCAA | 61.844 | 57.895 | 0.00 | 0.00 | 33.21 | 4.85 |
3394 | 3682 | 7.600375 | TCATAAACTAACAGAAGAAGACAGCAG | 59.400 | 37.037 | 0.00 | 0.00 | 0.00 | 4.24 |
3427 | 3715 | 7.674705 | GCCAAATTTGTGAAACTTTGTCTCTTG | 60.675 | 37.037 | 16.73 | 0.00 | 38.04 | 3.02 |
3479 | 3767 | 4.484236 | CACTCTTTGTTTGTTGAGTGCAA | 58.516 | 39.130 | 8.68 | 0.00 | 46.09 | 4.08 |
3553 | 3841 | 7.592938 | TCACAGCAAGTAACCATTTGATTTAG | 58.407 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
3579 | 3867 | 5.748402 | ACATGAGCTGAAATGGAACTATCA | 58.252 | 37.500 | 0.00 | 0.00 | 0.00 | 2.15 |
3583 | 3871 | 3.508793 | CCAACATGAGCTGAAATGGAACT | 59.491 | 43.478 | 0.00 | 0.00 | 32.19 | 3.01 |
3630 | 3918 | 4.335416 | ACTTATCACTCACCCACCAAATG | 58.665 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
3693 | 3981 | 3.961408 | GGGTCATGTAGTATCTGGTGAGT | 59.039 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
3722 | 4010 | 4.565166 | CCGTTTGAGCGACAAGTAATATGA | 59.435 | 41.667 | 0.00 | 0.00 | 39.77 | 2.15 |
3735 | 4023 | 4.224715 | TCTAGATACATCCGTTTGAGCG | 57.775 | 45.455 | 0.00 | 0.00 | 0.00 | 5.03 |
3781 | 4090 | 6.146184 | CGATCCATATTACTTGTCGCTCAAAT | 59.854 | 38.462 | 0.00 | 0.00 | 35.48 | 2.32 |
3902 | 4220 | 8.004215 | TCTTGCATATTATTCCTGTAAATGGGT | 58.996 | 33.333 | 0.00 | 0.00 | 0.00 | 4.51 |
4110 | 4693 | 5.282055 | TGATGCTTAGTATGTTCCTCTGG | 57.718 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
4156 | 4741 | 5.442391 | ACAAGTTAACTTTTCAGGGTGCTA | 58.558 | 37.500 | 18.25 | 0.00 | 33.11 | 3.49 |
4214 | 4799 | 9.940166 | GCTAGTATCTGTCTAACTTCTAACTTC | 57.060 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
4221 | 4806 | 7.763356 | TCACTTGCTAGTATCTGTCTAACTTC | 58.237 | 38.462 | 0.00 | 0.00 | 31.96 | 3.01 |
4234 | 4819 | 8.565896 | AATGATGAAATGTTCACTTGCTAGTA | 57.434 | 30.769 | 0.00 | 0.00 | 43.48 | 1.82 |
4267 | 4852 | 5.993441 | GGGCCGTATTCTAAATTGCTAGTAA | 59.007 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4288 | 4873 | 0.249447 | GGTTTTGTGAAGCACAGGGC | 60.249 | 55.000 | 0.24 | 0.00 | 45.39 | 5.19 |
4308 | 4893 | 7.633018 | AGGGAATATTTACTGCCAGAAGATA | 57.367 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
4356 | 4941 | 7.041107 | GCTTTGCAATAAGATGGGATAACAAA | 58.959 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
4452 | 5040 | 7.874940 | TGAAAGACAAATTCAAGATTCACGAT | 58.125 | 30.769 | 0.00 | 0.00 | 34.04 | 3.73 |
4600 | 5188 | 0.546598 | CTAAAGGGGCCGTTCTCCAT | 59.453 | 55.000 | 12.53 | 0.00 | 0.00 | 3.41 |
4602 | 5190 | 1.223763 | CCTAAAGGGGCCGTTCTCC | 59.776 | 63.158 | 12.53 | 0.00 | 0.00 | 3.71 |
4609 | 5197 | 2.168496 | GTTCAAAGACCTAAAGGGGCC | 58.832 | 52.381 | 0.00 | 0.00 | 46.87 | 5.80 |
4658 | 5249 | 5.570320 | TGCTTTCCTACTGCCTCTAAAAAT | 58.430 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
4823 | 5613 | 1.068055 | GGCTCAAGCATGTCCTTTGTG | 60.068 | 52.381 | 4.13 | 0.00 | 44.36 | 3.33 |
5212 | 6042 | 7.492020 | TGGATGAATTTTGTGACACAAGAAAAG | 59.508 | 33.333 | 19.74 | 0.00 | 39.53 | 2.27 |
5226 | 6056 | 3.359033 | TGGAGGAGCTGGATGAATTTTG | 58.641 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
5299 | 6205 | 6.154363 | GGCTTACATCTAGCTCCTATCTTGAT | 59.846 | 42.308 | 0.00 | 0.00 | 38.67 | 2.57 |
5300 | 6206 | 5.478679 | GGCTTACATCTAGCTCCTATCTTGA | 59.521 | 44.000 | 0.00 | 0.00 | 38.67 | 3.02 |
5343 | 6250 | 0.751277 | CTGGGTTGTGTGGCACTGAA | 60.751 | 55.000 | 19.83 | 8.43 | 35.11 | 3.02 |
5346 | 6253 | 0.751643 | GTTCTGGGTTGTGTGGCACT | 60.752 | 55.000 | 19.83 | 0.00 | 35.11 | 4.40 |
5350 | 6257 | 1.949525 | CAGAAGTTCTGGGTTGTGTGG | 59.050 | 52.381 | 22.95 | 0.00 | 40.71 | 4.17 |
5383 | 6290 | 8.441312 | AATGATGCTCTTCAAAACACATTTTT | 57.559 | 26.923 | 0.00 | 0.00 | 35.79 | 1.94 |
5411 | 6318 | 4.351874 | AGTTGCTAGCTACCACTTCAAA | 57.648 | 40.909 | 23.03 | 0.00 | 0.00 | 2.69 |
5448 | 6365 | 5.195940 | AGGGAGCGTAGTGTTGTATTACTA | 58.804 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
5461 | 6378 | 1.412710 | TCCATAAGCAAGGGAGCGTAG | 59.587 | 52.381 | 0.00 | 0.00 | 40.15 | 3.51 |
5474 | 6392 | 7.390718 | AGCAAAGGTAGTTACACTTTCCATAAG | 59.609 | 37.037 | 0.00 | 0.00 | 32.52 | 1.73 |
5479 | 6397 | 4.820173 | ACAGCAAAGGTAGTTACACTTTCC | 59.180 | 41.667 | 0.00 | 0.00 | 32.52 | 3.13 |
5490 | 6408 | 2.221169 | TCTGCAACACAGCAAAGGTAG | 58.779 | 47.619 | 0.00 | 0.00 | 46.76 | 3.18 |
5593 | 6514 | 1.195115 | GGATCTACTGACAGCACCCA | 58.805 | 55.000 | 1.25 | 0.00 | 0.00 | 4.51 |
5610 | 6531 | 1.409064 | GCATACAGTGACTGGATCGGA | 59.591 | 52.381 | 17.92 | 0.00 | 31.81 | 4.55 |
5667 | 6588 | 7.776107 | TCATTTACATCAGAACACCAAAACAA | 58.224 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
5795 | 6723 | 3.801114 | AAACAGCGGCTTCTTTTCTTT | 57.199 | 38.095 | 0.00 | 0.00 | 0.00 | 2.52 |
5796 | 6724 | 3.381590 | AGAAAACAGCGGCTTCTTTTCTT | 59.618 | 39.130 | 25.62 | 16.43 | 39.02 | 2.52 |
5807 | 6735 | 2.882742 | GCTGAGTTAGAAAACAGCGG | 57.117 | 50.000 | 0.00 | 0.00 | 44.27 | 5.52 |
5816 | 6744 | 5.240891 | CAAACCAGATCAAGCTGAGTTAGA | 58.759 | 41.667 | 0.00 | 0.00 | 38.14 | 2.10 |
5967 | 6896 | 0.981943 | AAGGGGTTACAGGGAGAACG | 59.018 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
5974 | 6903 | 4.455606 | GAAGATCATGAAGGGGTTACAGG | 58.544 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
5983 | 6912 | 3.878778 | AGGAAACCGAAGATCATGAAGG | 58.121 | 45.455 | 0.00 | 1.26 | 0.00 | 3.46 |
6002 | 6935 | 8.790718 | CAGGATAACAGATGAAAATTCCATAGG | 58.209 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
6005 | 6938 | 6.837568 | AGCAGGATAACAGATGAAAATTCCAT | 59.162 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
6037 | 6970 | 0.865769 | ACGGCAAGACACGATGAAAC | 59.134 | 50.000 | 0.00 | 0.00 | 0.00 | 2.78 |
6068 | 7001 | 3.732471 | CGCTTAGAAGTAGTGCTCCTCAC | 60.732 | 52.174 | 0.00 | 0.00 | 45.98 | 3.51 |
6081 | 7014 | 1.914634 | ACAGTCGCATCGCTTAGAAG | 58.085 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
6083 | 7016 | 2.014857 | AGTACAGTCGCATCGCTTAGA | 58.985 | 47.619 | 0.00 | 0.00 | 0.00 | 2.10 |
6087 | 7041 | 0.526211 | TTCAGTACAGTCGCATCGCT | 59.474 | 50.000 | 0.00 | 0.00 | 0.00 | 4.93 |
6143 | 7097 | 0.537188 | GCCTTGCTAGCCAGTACTCA | 59.463 | 55.000 | 13.29 | 0.00 | 0.00 | 3.41 |
6159 | 7113 | 1.303970 | GAGAAAGCCTGGCAAGCCT | 60.304 | 57.895 | 22.65 | 11.74 | 36.94 | 4.58 |
6160 | 7114 | 0.897401 | AAGAGAAAGCCTGGCAAGCC | 60.897 | 55.000 | 22.65 | 3.61 | 0.00 | 4.35 |
6161 | 7115 | 0.243095 | CAAGAGAAAGCCTGGCAAGC | 59.757 | 55.000 | 22.65 | 8.99 | 0.00 | 4.01 |
6162 | 7116 | 1.268899 | CACAAGAGAAAGCCTGGCAAG | 59.731 | 52.381 | 22.65 | 3.52 | 0.00 | 4.01 |
6163 | 7117 | 1.133823 | TCACAAGAGAAAGCCTGGCAA | 60.134 | 47.619 | 22.65 | 0.00 | 0.00 | 4.52 |
6164 | 7118 | 0.473755 | TCACAAGAGAAAGCCTGGCA | 59.526 | 50.000 | 22.65 | 0.00 | 0.00 | 4.92 |
6165 | 7119 | 1.742268 | GATCACAAGAGAAAGCCTGGC | 59.258 | 52.381 | 11.65 | 11.65 | 0.00 | 4.85 |
6166 | 7120 | 3.063510 | TGATCACAAGAGAAAGCCTGG | 57.936 | 47.619 | 0.00 | 0.00 | 0.00 | 4.45 |
6167 | 7121 | 4.008330 | ACATGATCACAAGAGAAAGCCTG | 58.992 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
6201 | 7167 | 1.737838 | ACACGATGCAGTTACCATGG | 58.262 | 50.000 | 11.19 | 11.19 | 0.00 | 3.66 |
6256 | 7227 | 3.716006 | CTGCCGGCGTTCACTGTG | 61.716 | 66.667 | 23.90 | 0.17 | 0.00 | 3.66 |
6271 | 7242 | 0.588252 | CGTGGTTGCTCTTTGTCCTG | 59.412 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
6280 | 7251 | 2.045926 | AGCCCATCGTGGTTGCTC | 60.046 | 61.111 | 3.82 | 0.00 | 30.72 | 4.26 |
6350 | 7321 | 2.281484 | TTTGTCCGTGCAGAGGCC | 60.281 | 61.111 | 0.00 | 0.00 | 40.13 | 5.19 |
6351 | 7322 | 2.328099 | CCTTTGTCCGTGCAGAGGC | 61.328 | 63.158 | 3.34 | 0.56 | 34.61 | 4.70 |
6352 | 7323 | 0.250295 | TTCCTTTGTCCGTGCAGAGG | 60.250 | 55.000 | 1.80 | 1.80 | 40.81 | 3.69 |
6371 | 7342 | 3.924576 | GCCAAAGGGGGATACATGT | 57.075 | 52.632 | 2.69 | 2.69 | 37.04 | 3.21 |
6380 | 7351 | 2.994643 | AAACTGGTCCGCCAAAGGGG | 62.995 | 60.000 | 0.00 | 0.00 | 45.51 | 4.79 |
6397 | 7379 | 3.860378 | GCCGCATTTTTGTCCTGATGAAA | 60.860 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
6408 | 7391 | 1.569708 | ACACTGTTGCCGCATTTTTG | 58.430 | 45.000 | 0.00 | 0.00 | 0.00 | 2.44 |
6418 | 7407 | 2.743664 | TGAGATGCACATACACTGTTGC | 59.256 | 45.455 | 0.00 | 0.00 | 35.29 | 4.17 |
6465 | 7463 | 1.922570 | ACTGATTATGACCGCACGTC | 58.077 | 50.000 | 0.00 | 0.00 | 42.33 | 4.34 |
6532 | 7533 | 1.300311 | CACGTGAACTGGCCGTGTA | 60.300 | 57.895 | 10.90 | 0.00 | 45.00 | 2.90 |
6566 | 7567 | 3.385111 | CCAGTAGACAAGGGAGATGGTAC | 59.615 | 52.174 | 0.00 | 0.00 | 0.00 | 3.34 |
6567 | 7568 | 3.643237 | CCAGTAGACAAGGGAGATGGTA | 58.357 | 50.000 | 0.00 | 0.00 | 0.00 | 3.25 |
6568 | 7569 | 2.472029 | CCAGTAGACAAGGGAGATGGT | 58.528 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
6569 | 7570 | 1.139853 | GCCAGTAGACAAGGGAGATGG | 59.860 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
6570 | 7571 | 2.114616 | AGCCAGTAGACAAGGGAGATG | 58.885 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
6571 | 7572 | 2.559381 | AGCCAGTAGACAAGGGAGAT | 57.441 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
6572 | 7573 | 2.312140 | AGTAGCCAGTAGACAAGGGAGA | 59.688 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
6573 | 7574 | 2.428890 | CAGTAGCCAGTAGACAAGGGAG | 59.571 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
6574 | 7575 | 2.457598 | CAGTAGCCAGTAGACAAGGGA | 58.542 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
6575 | 7576 | 1.134670 | GCAGTAGCCAGTAGACAAGGG | 60.135 | 57.143 | 0.00 | 0.00 | 33.58 | 3.95 |
6576 | 7577 | 2.301577 | GCAGTAGCCAGTAGACAAGG | 57.698 | 55.000 | 0.00 | 0.00 | 33.58 | 3.61 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.