Multiple sequence alignment - TraesCS4B01G309200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G309200 chr4B 100.000 5348 0 0 1 5348 599823295 599817948 0.000000e+00 9877.0
1 TraesCS4B01G309200 chr4D 94.590 3087 110 32 980 4034 475150212 475147151 0.000000e+00 4723.0
2 TraesCS4B01G309200 chr4D 93.117 770 39 6 4014 4779 475147141 475146382 0.000000e+00 1116.0
3 TraesCS4B01G309200 chr4D 91.588 737 61 1 9 744 52749929 52750665 0.000000e+00 1016.0
4 TraesCS4B01G309200 chr4D 90.476 273 15 8 4872 5133 475125651 475125379 3.070000e-92 350.0
5 TraesCS4B01G309200 chr4A 92.906 1607 71 19 2620 4216 681905614 681904041 0.000000e+00 2296.0
6 TraesCS4B01G309200 chr4A 88.470 928 70 22 4205 5115 681903436 681902529 0.000000e+00 1086.0
7 TraesCS4B01G309200 chr4A 90.207 531 29 14 1245 1769 681907070 681906557 0.000000e+00 671.0
8 TraesCS4B01G309200 chr4A 85.328 518 44 21 1831 2323 681906556 681906046 1.720000e-139 507.0
9 TraesCS4B01G309200 chr7B 92.027 740 58 1 4 742 40185145 40184406 0.000000e+00 1038.0
10 TraesCS4B01G309200 chr7B 92.027 740 57 2 1 738 110879289 110880028 0.000000e+00 1038.0
11 TraesCS4B01G309200 chr2B 91.790 743 58 3 1 741 799580261 799581002 0.000000e+00 1031.0
12 TraesCS4B01G309200 chr2B 91.521 743 60 3 1 741 799582921 799583662 0.000000e+00 1020.0
13 TraesCS4B01G309200 chr2B 91.252 743 62 3 1 741 799581591 799582332 0.000000e+00 1009.0
14 TraesCS4B01G309200 chr5B 91.228 741 62 3 1 740 661842232 661842970 0.000000e+00 1005.0
15 TraesCS4B01G309200 chr7A 91.233 730 63 1 9 737 219167243 219166514 0.000000e+00 992.0
16 TraesCS4B01G309200 chr6B 90.984 732 64 2 9 739 560790649 560789919 0.000000e+00 985.0
17 TraesCS4B01G309200 chr5D 84.231 1040 99 33 1748 2744 353964256 353963239 0.000000e+00 952.0
18 TraesCS4B01G309200 chr3A 82.843 408 48 14 3663 4067 102226727 102227115 3.960000e-91 346.0
19 TraesCS4B01G309200 chr1A 82.452 416 52 12 3663 4075 588138508 588138111 1.430000e-90 344.0
20 TraesCS4B01G309200 chr1A 86.772 189 19 2 3474 3656 588138863 588138675 7.020000e-49 206.0
21 TraesCS4B01G309200 chr1A 84.000 100 15 1 4033 4131 588138108 588138009 1.590000e-15 95.3
22 TraesCS4B01G309200 chr1B 85.714 189 21 2 3474 3656 637345043 637344855 1.520000e-45 195.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G309200 chr4B 599817948 599823295 5347 True 9877.0 9877 100.00000 1 5348 1 chr4B.!!$R1 5347
1 TraesCS4B01G309200 chr4D 475146382 475150212 3830 True 2919.5 4723 93.85350 980 4779 2 chr4D.!!$R2 3799
2 TraesCS4B01G309200 chr4D 52749929 52750665 736 False 1016.0 1016 91.58800 9 744 1 chr4D.!!$F1 735
3 TraesCS4B01G309200 chr4A 681902529 681907070 4541 True 1140.0 2296 89.22775 1245 5115 4 chr4A.!!$R1 3870
4 TraesCS4B01G309200 chr7B 40184406 40185145 739 True 1038.0 1038 92.02700 4 742 1 chr7B.!!$R1 738
5 TraesCS4B01G309200 chr7B 110879289 110880028 739 False 1038.0 1038 92.02700 1 738 1 chr7B.!!$F1 737
6 TraesCS4B01G309200 chr2B 799580261 799583662 3401 False 1020.0 1031 91.52100 1 741 3 chr2B.!!$F1 740
7 TraesCS4B01G309200 chr5B 661842232 661842970 738 False 1005.0 1005 91.22800 1 740 1 chr5B.!!$F1 739
8 TraesCS4B01G309200 chr7A 219166514 219167243 729 True 992.0 992 91.23300 9 737 1 chr7A.!!$R1 728
9 TraesCS4B01G309200 chr6B 560789919 560790649 730 True 985.0 985 90.98400 9 739 1 chr6B.!!$R1 730
10 TraesCS4B01G309200 chr5D 353963239 353964256 1017 True 952.0 952 84.23100 1748 2744 1 chr5D.!!$R1 996
11 TraesCS4B01G309200 chr1A 588138009 588138863 854 True 215.1 344 84.40800 3474 4131 3 chr1A.!!$R1 657

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
855 859 0.107066 TACTGTGCCATGCCCATCTG 60.107 55.000 0.0 0.0 0.00 2.90 F
1208 1218 0.106918 ACCACCTTCGCCAAAGACAA 60.107 50.000 0.0 0.0 37.12 3.18 F
1256 1281 1.229984 CCCTCAACCCTCTTCCCCT 60.230 63.158 0.0 0.0 0.00 4.79 F
1346 1375 1.371558 GTTCGGGTGCAGAGGAGTT 59.628 57.895 0.0 0.0 0.00 3.01 F
1588 1625 1.876799 CCGTACATTGTTGTCAAGGCA 59.123 47.619 0.0 0.0 38.67 4.75 F
3304 4050 1.447643 CTGGGGCAGGATTCTACCG 59.552 63.158 0.0 0.0 34.73 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1746 1783 1.125270 CGCCCGCAAGTTAAACAAAC 58.875 50.000 0.0 0.0 38.46 2.93 R
2083 2130 3.692257 ACTGCAAGAGCTGTAGTCAAT 57.308 42.857 0.0 0.0 46.94 2.57 R
3166 3909 5.009610 AGGCATACACCTTAACAAAACACAG 59.990 40.000 0.0 0.0 36.28 3.66 R
3173 3918 5.828299 GCAATAGGCATACACCTTAACAA 57.172 39.130 0.0 0.0 43.97 2.83 R
3410 4157 0.035056 AAGGGTGTGTATGGCTGCTC 60.035 55.000 0.0 0.0 0.00 4.26 R
5192 7281 0.036671 GGAGGGTACTCGTTTGGTGG 60.037 60.000 0.0 0.0 44.93 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.021229 TCCGCTCTGTAGTTAGGATTTGA 58.979 43.478 0.00 0.00 0.00 2.69
33 34 5.046878 TCCGCTCTGTAGTTAGGATTTGAAA 60.047 40.000 0.00 0.00 0.00 2.69
34 35 5.063564 CCGCTCTGTAGTTAGGATTTGAAAC 59.936 44.000 0.00 0.00 0.00 2.78
76 77 4.760047 GTGGTGGGAGCGTCGCAT 62.760 66.667 21.09 4.29 41.42 4.73
109 110 0.842030 TGCCTCAACTCCACTCCCAT 60.842 55.000 0.00 0.00 0.00 4.00
152 153 0.389817 CGTCTCGGAGTTGATGGCAA 60.390 55.000 4.69 0.00 0.00 4.52
189 190 2.496070 CCTTCAGATCGGTGGTGTTAGA 59.504 50.000 0.00 0.00 0.00 2.10
206 207 4.532126 TGTTAGAGTTCATGGATGGTGTCT 59.468 41.667 0.00 0.00 0.00 3.41
240 241 1.899814 GGTGACTCCATCAGGTGTGTA 59.100 52.381 0.00 0.00 41.49 2.90
261 262 0.906756 CTCCTTCTGCTCTGTCCCCA 60.907 60.000 0.00 0.00 0.00 4.96
326 327 0.963856 TGTCATCCAGGAGTACGCGT 60.964 55.000 19.17 19.17 0.00 6.01
449 451 0.692756 TGTGGGGGTGTCAGTTCTGA 60.693 55.000 0.00 0.00 0.00 3.27
459 461 4.299155 GTGTCAGTTCTGAAGTTCGATGA 58.701 43.478 3.99 0.00 0.00 2.92
574 577 4.194720 GATGGAGCCGCGTCGAGT 62.195 66.667 4.92 0.00 0.00 4.18
576 579 3.296709 ATGGAGCCGCGTCGAGTTT 62.297 57.895 4.92 0.00 0.00 2.66
584 587 1.289109 CGCGTCGAGTTTGGGTGAAT 61.289 55.000 0.00 0.00 0.00 2.57
608 611 4.019771 AGGTGATCTGTCTCCTTTTCCTTC 60.020 45.833 0.00 0.00 43.96 3.46
629 632 2.725312 GGAGAGGGACATGCGCTGA 61.725 63.158 9.73 0.00 40.28 4.26
680 683 6.944557 TCAGTACTGTAATGTCGATGTTTG 57.055 37.500 21.99 0.00 0.00 2.93
756 760 1.553706 AAAAAGATGGCAGCAGGAGG 58.446 50.000 5.19 0.00 0.00 4.30
757 761 0.324091 AAAAGATGGCAGCAGGAGGG 60.324 55.000 5.19 0.00 0.00 4.30
758 762 2.220786 AAAGATGGCAGCAGGAGGGG 62.221 60.000 5.19 0.00 0.00 4.79
759 763 3.092511 GATGGCAGCAGGAGGGGA 61.093 66.667 0.00 0.00 0.00 4.81
760 764 3.095163 ATGGCAGCAGGAGGGGAG 61.095 66.667 0.00 0.00 0.00 4.30
764 768 3.086600 CAGCAGGAGGGGAGGGAC 61.087 72.222 0.00 0.00 0.00 4.46
765 769 3.615811 AGCAGGAGGGGAGGGACA 61.616 66.667 0.00 0.00 0.00 4.02
766 770 2.610859 GCAGGAGGGGAGGGACAA 60.611 66.667 0.00 0.00 0.00 3.18
767 771 2.231380 GCAGGAGGGGAGGGACAAA 61.231 63.158 0.00 0.00 0.00 2.83
768 772 1.789576 GCAGGAGGGGAGGGACAAAA 61.790 60.000 0.00 0.00 0.00 2.44
769 773 0.777446 CAGGAGGGGAGGGACAAAAA 59.223 55.000 0.00 0.00 0.00 1.94
784 788 1.807226 AAAAATTCCTAGCGGCGGC 59.193 52.632 9.78 8.43 40.37 6.53
785 789 1.988834 AAAAATTCCTAGCGGCGGCG 61.989 55.000 28.70 28.70 46.35 6.46
786 790 4.910585 AATTCCTAGCGGCGGCGG 62.911 66.667 33.02 16.22 46.35 6.13
804 808 3.435186 GGCTGCAAACCCTCGCTC 61.435 66.667 0.50 0.00 0.00 5.03
805 809 3.793144 GCTGCAAACCCTCGCTCG 61.793 66.667 0.00 0.00 0.00 5.03
806 810 2.357517 CTGCAAACCCTCGCTCGT 60.358 61.111 0.00 0.00 0.00 4.18
807 811 1.961277 CTGCAAACCCTCGCTCGTT 60.961 57.895 0.00 0.00 0.00 3.85
808 812 1.901650 CTGCAAACCCTCGCTCGTTC 61.902 60.000 0.00 0.00 0.00 3.95
809 813 2.677979 GCAAACCCTCGCTCGTTCC 61.678 63.158 0.00 0.00 0.00 3.62
810 814 1.004918 CAAACCCTCGCTCGTTCCT 60.005 57.895 0.00 0.00 0.00 3.36
811 815 0.245539 CAAACCCTCGCTCGTTCCTA 59.754 55.000 0.00 0.00 0.00 2.94
812 816 0.245813 AAACCCTCGCTCGTTCCTAC 59.754 55.000 0.00 0.00 0.00 3.18
813 817 1.602327 AACCCTCGCTCGTTCCTACC 61.602 60.000 0.00 0.00 0.00 3.18
814 818 2.783288 CCCTCGCTCGTTCCTACCC 61.783 68.421 0.00 0.00 0.00 3.69
815 819 2.783288 CCTCGCTCGTTCCTACCCC 61.783 68.421 0.00 0.00 0.00 4.95
816 820 2.757099 TCGCTCGTTCCTACCCCC 60.757 66.667 0.00 0.00 0.00 5.40
817 821 2.758737 CGCTCGTTCCTACCCCCT 60.759 66.667 0.00 0.00 0.00 4.79
818 822 2.901042 GCTCGTTCCTACCCCCTG 59.099 66.667 0.00 0.00 0.00 4.45
819 823 2.901042 CTCGTTCCTACCCCCTGC 59.099 66.667 0.00 0.00 0.00 4.85
820 824 2.686106 TCGTTCCTACCCCCTGCC 60.686 66.667 0.00 0.00 0.00 4.85
821 825 4.157120 CGTTCCTACCCCCTGCCG 62.157 72.222 0.00 0.00 0.00 5.69
822 826 3.007323 GTTCCTACCCCCTGCCGT 61.007 66.667 0.00 0.00 0.00 5.68
823 827 2.204029 TTCCTACCCCCTGCCGTT 60.204 61.111 0.00 0.00 0.00 4.44
824 828 1.080722 TTCCTACCCCCTGCCGTTA 59.919 57.895 0.00 0.00 0.00 3.18
825 829 0.547229 TTCCTACCCCCTGCCGTTAA 60.547 55.000 0.00 0.00 0.00 2.01
826 830 0.979187 TCCTACCCCCTGCCGTTAAG 60.979 60.000 0.00 0.00 0.00 1.85
827 831 0.979187 CCTACCCCCTGCCGTTAAGA 60.979 60.000 0.00 0.00 0.00 2.10
828 832 0.906775 CTACCCCCTGCCGTTAAGAA 59.093 55.000 0.00 0.00 0.00 2.52
829 833 1.279846 CTACCCCCTGCCGTTAAGAAA 59.720 52.381 0.00 0.00 0.00 2.52
830 834 0.479378 ACCCCCTGCCGTTAAGAAAA 59.521 50.000 0.00 0.00 0.00 2.29
831 835 1.133419 ACCCCCTGCCGTTAAGAAAAA 60.133 47.619 0.00 0.00 0.00 1.94
849 853 3.874392 AAAAGATTACTGTGCCATGCC 57.126 42.857 0.00 0.00 0.00 4.40
850 854 1.767759 AAGATTACTGTGCCATGCCC 58.232 50.000 0.00 0.00 0.00 5.36
851 855 0.625316 AGATTACTGTGCCATGCCCA 59.375 50.000 0.00 0.00 0.00 5.36
852 856 1.216175 AGATTACTGTGCCATGCCCAT 59.784 47.619 0.00 0.00 0.00 4.00
853 857 1.610522 GATTACTGTGCCATGCCCATC 59.389 52.381 0.00 0.00 0.00 3.51
854 858 0.625316 TTACTGTGCCATGCCCATCT 59.375 50.000 0.00 0.00 0.00 2.90
855 859 0.107066 TACTGTGCCATGCCCATCTG 60.107 55.000 0.00 0.00 0.00 2.90
856 860 2.756691 TGTGCCATGCCCATCTGC 60.757 61.111 0.00 0.00 0.00 4.26
857 861 3.534056 GTGCCATGCCCATCTGCC 61.534 66.667 0.00 0.00 0.00 4.85
858 862 4.845447 TGCCATGCCCATCTGCCC 62.845 66.667 0.00 0.00 0.00 5.36
859 863 4.534824 GCCATGCCCATCTGCCCT 62.535 66.667 0.00 0.00 0.00 5.19
860 864 3.137385 GCCATGCCCATCTGCCCTA 62.137 63.158 0.00 0.00 0.00 3.53
861 865 1.772308 CCATGCCCATCTGCCCTAT 59.228 57.895 0.00 0.00 0.00 2.57
862 866 0.113776 CCATGCCCATCTGCCCTATT 59.886 55.000 0.00 0.00 0.00 1.73
863 867 1.254026 CATGCCCATCTGCCCTATTG 58.746 55.000 0.00 0.00 0.00 1.90
864 868 0.113776 ATGCCCATCTGCCCTATTGG 59.886 55.000 0.00 0.00 37.09 3.16
865 869 1.288508 TGCCCATCTGCCCTATTGGT 61.289 55.000 0.00 0.00 36.04 3.67
866 870 0.771127 GCCCATCTGCCCTATTGGTA 59.229 55.000 0.00 0.00 36.04 3.25
867 871 1.144913 GCCCATCTGCCCTATTGGTAA 59.855 52.381 0.00 0.00 36.04 2.85
868 872 2.424234 GCCCATCTGCCCTATTGGTAAA 60.424 50.000 0.00 0.00 36.04 2.01
869 873 3.222603 CCCATCTGCCCTATTGGTAAAC 58.777 50.000 0.00 0.00 36.04 2.01
870 874 3.222603 CCATCTGCCCTATTGGTAAACC 58.777 50.000 0.00 0.00 36.04 3.27
871 875 3.372566 CCATCTGCCCTATTGGTAAACCA 60.373 47.826 0.00 0.00 45.94 3.67
883 887 4.903045 TGGTAAACCAAACAAACCCAAA 57.097 36.364 0.00 0.00 44.35 3.28
884 888 5.237236 TGGTAAACCAAACAAACCCAAAA 57.763 34.783 0.00 0.00 44.35 2.44
885 889 5.816682 TGGTAAACCAAACAAACCCAAAAT 58.183 33.333 0.00 0.00 44.35 1.82
886 890 5.880887 TGGTAAACCAAACAAACCCAAAATC 59.119 36.000 0.00 0.00 44.35 2.17
887 891 5.880887 GGTAAACCAAACAAACCCAAAATCA 59.119 36.000 0.00 0.00 35.64 2.57
888 892 6.037720 GGTAAACCAAACAAACCCAAAATCAG 59.962 38.462 0.00 0.00 35.64 2.90
889 893 3.540617 ACCAAACAAACCCAAAATCAGC 58.459 40.909 0.00 0.00 0.00 4.26
890 894 2.543430 CCAAACAAACCCAAAATCAGCG 59.457 45.455 0.00 0.00 0.00 5.18
891 895 3.194062 CAAACAAACCCAAAATCAGCGT 58.806 40.909 0.00 0.00 0.00 5.07
892 896 3.535280 AACAAACCCAAAATCAGCGTT 57.465 38.095 0.00 0.00 0.00 4.84
893 897 2.820330 ACAAACCCAAAATCAGCGTTG 58.180 42.857 0.00 0.00 0.00 4.10
894 898 2.167487 ACAAACCCAAAATCAGCGTTGT 59.833 40.909 0.00 0.00 0.00 3.32
895 899 2.793278 AACCCAAAATCAGCGTTGTC 57.207 45.000 0.00 0.00 0.00 3.18
896 900 0.958822 ACCCAAAATCAGCGTTGTCC 59.041 50.000 0.00 0.00 0.00 4.02
897 901 0.243636 CCCAAAATCAGCGTTGTCCC 59.756 55.000 0.00 0.00 0.00 4.46
898 902 0.243636 CCAAAATCAGCGTTGTCCCC 59.756 55.000 0.00 0.00 0.00 4.81
899 903 1.247567 CAAAATCAGCGTTGTCCCCT 58.752 50.000 0.00 0.00 0.00 4.79
900 904 1.200020 CAAAATCAGCGTTGTCCCCTC 59.800 52.381 0.00 0.00 0.00 4.30
901 905 0.322546 AAATCAGCGTTGTCCCCTCC 60.323 55.000 0.00 0.00 0.00 4.30
902 906 1.488705 AATCAGCGTTGTCCCCTCCA 61.489 55.000 0.00 0.00 0.00 3.86
903 907 1.903877 ATCAGCGTTGTCCCCTCCAG 61.904 60.000 0.00 0.00 0.00 3.86
904 908 3.322466 AGCGTTGTCCCCTCCAGG 61.322 66.667 0.00 0.00 0.00 4.45
906 910 4.410400 CGTTGTCCCCTCCAGGCC 62.410 72.222 0.00 0.00 0.00 5.19
907 911 4.048470 GTTGTCCCCTCCAGGCCC 62.048 72.222 0.00 0.00 0.00 5.80
908 912 4.285790 TTGTCCCCTCCAGGCCCT 62.286 66.667 0.00 0.00 0.00 5.19
909 913 4.741239 TGTCCCCTCCAGGCCCTC 62.741 72.222 0.00 0.00 0.00 4.30
914 918 4.787280 CCTCCAGGCCCTCCGACT 62.787 72.222 0.00 0.00 37.47 4.18
915 919 3.465403 CTCCAGGCCCTCCGACTG 61.465 72.222 0.00 0.00 37.47 3.51
918 922 3.003173 CAGGCCCTCCGACTGGAA 61.003 66.667 0.00 0.00 45.87 3.53
919 923 2.203938 AGGCCCTCCGACTGGAAA 60.204 61.111 0.00 0.00 45.87 3.13
920 924 1.616628 AGGCCCTCCGACTGGAAAT 60.617 57.895 0.00 0.00 45.87 2.17
921 925 1.208165 AGGCCCTCCGACTGGAAATT 61.208 55.000 0.00 0.00 45.87 1.82
922 926 0.748367 GGCCCTCCGACTGGAAATTC 60.748 60.000 0.00 0.00 45.87 2.17
923 927 1.090052 GCCCTCCGACTGGAAATTCG 61.090 60.000 0.00 0.00 45.87 3.34
924 928 0.249398 CCCTCCGACTGGAAATTCGT 59.751 55.000 0.00 0.00 45.87 3.85
925 929 1.641577 CCTCCGACTGGAAATTCGTC 58.358 55.000 0.00 0.00 45.87 4.20
926 930 1.641577 CTCCGACTGGAAATTCGTCC 58.358 55.000 0.00 0.00 45.87 4.79
927 931 1.204941 CTCCGACTGGAAATTCGTCCT 59.795 52.381 0.00 0.00 45.87 3.85
928 932 1.067142 TCCGACTGGAAATTCGTCCTG 60.067 52.381 2.41 2.41 42.85 3.86
929 933 1.359848 CGACTGGAAATTCGTCCTGG 58.640 55.000 7.68 0.00 40.11 4.45
930 934 1.087501 GACTGGAAATTCGTCCTGGC 58.912 55.000 7.68 1.51 40.11 4.85
931 935 0.693049 ACTGGAAATTCGTCCTGGCT 59.307 50.000 7.68 0.00 40.11 4.75
932 936 1.073923 ACTGGAAATTCGTCCTGGCTT 59.926 47.619 7.68 0.00 40.11 4.35
933 937 1.740025 CTGGAAATTCGTCCTGGCTTC 59.260 52.381 0.00 0.00 38.62 3.86
934 938 1.095600 GGAAATTCGTCCTGGCTTCC 58.904 55.000 0.00 0.00 34.56 3.46
935 939 1.095600 GAAATTCGTCCTGGCTTCCC 58.904 55.000 0.00 0.00 0.00 3.97
936 940 0.404040 AAATTCGTCCTGGCTTCCCA 59.596 50.000 0.00 0.00 39.32 4.37
937 941 0.404040 AATTCGTCCTGGCTTCCCAA 59.596 50.000 0.00 0.00 41.58 4.12
938 942 0.404040 ATTCGTCCTGGCTTCCCAAA 59.596 50.000 0.00 0.00 41.58 3.28
939 943 0.536460 TTCGTCCTGGCTTCCCAAAC 60.536 55.000 0.00 0.00 41.58 2.93
940 944 1.971695 CGTCCTGGCTTCCCAAACC 60.972 63.158 0.00 0.00 41.58 3.27
941 945 1.606601 GTCCTGGCTTCCCAAACCC 60.607 63.158 0.00 0.00 41.58 4.11
942 946 2.088096 TCCTGGCTTCCCAAACCCA 61.088 57.895 0.00 0.00 41.58 4.51
943 947 1.908299 CCTGGCTTCCCAAACCCAC 60.908 63.158 0.00 0.00 41.58 4.61
944 948 1.152567 CTGGCTTCCCAAACCCACA 60.153 57.895 0.00 0.00 41.58 4.17
945 949 1.456705 TGGCTTCCCAAACCCACAC 60.457 57.895 0.00 0.00 38.46 3.82
946 950 2.207229 GGCTTCCCAAACCCACACC 61.207 63.158 0.00 0.00 0.00 4.16
947 951 2.561037 GCTTCCCAAACCCACACCG 61.561 63.158 0.00 0.00 0.00 4.94
948 952 2.519780 TTCCCAAACCCACACCGC 60.520 61.111 0.00 0.00 0.00 5.68
949 953 4.589675 TCCCAAACCCACACCGCC 62.590 66.667 0.00 0.00 0.00 6.13
950 954 4.596585 CCCAAACCCACACCGCCT 62.597 66.667 0.00 0.00 0.00 5.52
951 955 2.983592 CCAAACCCACACCGCCTC 60.984 66.667 0.00 0.00 0.00 4.70
952 956 2.983592 CAAACCCACACCGCCTCC 60.984 66.667 0.00 0.00 0.00 4.30
953 957 3.175710 AAACCCACACCGCCTCCT 61.176 61.111 0.00 0.00 0.00 3.69
954 958 3.192103 AAACCCACACCGCCTCCTC 62.192 63.158 0.00 0.00 0.00 3.71
964 968 4.537433 GCCTCCTCGCGCTCCAAT 62.537 66.667 5.56 0.00 0.00 3.16
965 969 2.279784 CCTCCTCGCGCTCCAATC 60.280 66.667 5.56 0.00 0.00 2.67
966 970 2.279784 CTCCTCGCGCTCCAATCC 60.280 66.667 5.56 0.00 0.00 3.01
967 971 3.074369 TCCTCGCGCTCCAATCCA 61.074 61.111 5.56 0.00 0.00 3.41
968 972 2.109799 CCTCGCGCTCCAATCCAT 59.890 61.111 5.56 0.00 0.00 3.41
969 973 1.958205 CCTCGCGCTCCAATCCATC 60.958 63.158 5.56 0.00 0.00 3.51
970 974 2.279451 TCGCGCTCCAATCCATCG 60.279 61.111 5.56 0.00 0.00 3.84
971 975 2.279451 CGCGCTCCAATCCATCGA 60.279 61.111 5.56 0.00 0.00 3.59
972 976 1.882625 CGCGCTCCAATCCATCGAA 60.883 57.895 5.56 0.00 0.00 3.71
973 977 1.428370 CGCGCTCCAATCCATCGAAA 61.428 55.000 5.56 0.00 0.00 3.46
974 978 0.947244 GCGCTCCAATCCATCGAAAT 59.053 50.000 0.00 0.00 0.00 2.17
975 979 1.069636 GCGCTCCAATCCATCGAAATC 60.070 52.381 0.00 0.00 0.00 2.17
976 980 1.532868 CGCTCCAATCCATCGAAATCC 59.467 52.381 0.00 0.00 0.00 3.01
977 981 2.575532 GCTCCAATCCATCGAAATCCA 58.424 47.619 0.00 0.00 0.00 3.41
978 982 2.951642 GCTCCAATCCATCGAAATCCAA 59.048 45.455 0.00 0.00 0.00 3.53
1034 1038 2.674754 GGAGGGCGGAACCAATGA 59.325 61.111 0.00 0.00 42.05 2.57
1042 1046 2.409870 GGAACCAATGAGGCAGCGG 61.410 63.158 0.00 0.00 43.14 5.52
1044 1048 3.866379 AACCAATGAGGCAGCGGCA 62.866 57.895 11.88 0.00 43.71 5.69
1070 1080 1.756950 CGACGGAGGGGGAGAATCA 60.757 63.158 0.00 0.00 36.25 2.57
1072 1082 2.034048 GACGGAGGGGGAGAATCAGC 62.034 65.000 0.00 0.00 36.25 4.26
1089 1099 4.814294 CGTCGGAAGGGGAAGCCG 62.814 72.222 0.00 0.00 46.08 5.52
1103 1113 4.530857 GCCGTGGGACGAGGATGG 62.531 72.222 0.00 0.00 46.05 3.51
1147 1157 3.007973 GCGGAGAAGTTCGAGCCCT 62.008 63.158 0.00 0.00 0.00 5.19
1208 1218 0.106918 ACCACCTTCGCCAAAGACAA 60.107 50.000 0.00 0.00 37.12 3.18
1230 1240 2.094659 CATGCGACCGACCACTCAC 61.095 63.158 0.00 0.00 0.00 3.51
1234 1244 2.567049 GACCGACCACTCACTCCG 59.433 66.667 0.00 0.00 0.00 4.63
1235 1245 3.628280 GACCGACCACTCACTCCGC 62.628 68.421 0.00 0.00 0.00 5.54
1256 1281 1.229984 CCCTCAACCCTCTTCCCCT 60.230 63.158 0.00 0.00 0.00 4.79
1300 1325 3.560068 GGAATTGAGCCGTATTTGATCGT 59.440 43.478 0.00 0.00 0.00 3.73
1302 1327 5.235616 GGAATTGAGCCGTATTTGATCGTTA 59.764 40.000 0.00 0.00 0.00 3.18
1308 1333 3.619929 GCCGTATTTGATCGTTAAGGTGT 59.380 43.478 0.00 0.00 0.00 4.16
1320 1345 4.095185 TCGTTAAGGTGTCCTGTTTGTTTG 59.905 41.667 0.00 0.00 32.13 2.93
1321 1346 4.142556 CGTTAAGGTGTCCTGTTTGTTTGT 60.143 41.667 0.00 0.00 32.13 2.83
1322 1347 5.620429 CGTTAAGGTGTCCTGTTTGTTTGTT 60.620 40.000 0.00 0.00 32.13 2.83
1323 1348 4.882842 AAGGTGTCCTGTTTGTTTGTTT 57.117 36.364 0.00 0.00 32.13 2.83
1346 1375 1.371558 GTTCGGGTGCAGAGGAGTT 59.628 57.895 0.00 0.00 0.00 3.01
1392 1421 3.426568 GGCGCACTGAAGGAGCAC 61.427 66.667 10.83 0.00 0.00 4.40
1436 1465 3.064207 TGGTACGCTGATCACTTGTTTC 58.936 45.455 0.00 0.00 0.00 2.78
1570 1607 2.284699 AGGAAGACCAGGGACCCG 60.285 66.667 4.40 0.00 38.94 5.28
1588 1625 1.876799 CCGTACATTGTTGTCAAGGCA 59.123 47.619 0.00 0.00 38.67 4.75
1672 1709 2.160219 GTGCTTTGTTGCTGATCGATCA 59.840 45.455 25.80 25.80 35.16 2.92
1682 1719 2.910199 CTGATCGATCAAGCCCTTCAA 58.090 47.619 27.09 2.28 36.18 2.69
1688 1725 3.077359 CGATCAAGCCCTTCAACTTCTT 58.923 45.455 0.00 0.00 0.00 2.52
1712 1749 3.801638 GCAACTCTGTCTGACATGTGTCT 60.802 47.826 11.45 0.00 44.99 3.41
1713 1750 4.375272 CAACTCTGTCTGACATGTGTCTT 58.625 43.478 11.45 0.00 44.99 3.01
1714 1751 5.532557 CAACTCTGTCTGACATGTGTCTTA 58.467 41.667 11.45 0.20 44.99 2.10
1715 1752 5.791336 ACTCTGTCTGACATGTGTCTTAA 57.209 39.130 11.45 0.00 44.99 1.85
1721 1758 8.344831 TCTGTCTGACATGTGTCTTAATTTTTG 58.655 33.333 11.45 0.00 44.99 2.44
1723 1760 7.141363 GTCTGACATGTGTCTTAATTTTTGCT 58.859 34.615 1.15 0.00 44.99 3.91
1724 1761 7.324616 GTCTGACATGTGTCTTAATTTTTGCTC 59.675 37.037 1.15 0.00 44.99 4.26
1727 1764 7.809331 TGACATGTGTCTTAATTTTTGCTCATC 59.191 33.333 1.15 0.00 44.99 2.92
1728 1765 7.889469 ACATGTGTCTTAATTTTTGCTCATCT 58.111 30.769 0.00 0.00 0.00 2.90
1729 1766 7.811236 ACATGTGTCTTAATTTTTGCTCATCTG 59.189 33.333 0.00 0.00 0.00 2.90
1730 1767 7.509141 TGTGTCTTAATTTTTGCTCATCTGA 57.491 32.000 0.00 0.00 0.00 3.27
1731 1768 8.114331 TGTGTCTTAATTTTTGCTCATCTGAT 57.886 30.769 0.00 0.00 0.00 2.90
1732 1769 8.579006 TGTGTCTTAATTTTTGCTCATCTGATT 58.421 29.630 0.00 0.00 0.00 2.57
1733 1770 9.070149 GTGTCTTAATTTTTGCTCATCTGATTC 57.930 33.333 0.00 0.00 0.00 2.52
1743 1780 4.205587 GCTCATCTGATTCATGGAGGTTT 58.794 43.478 0.00 0.00 0.00 3.27
1744 1781 4.643784 GCTCATCTGATTCATGGAGGTTTT 59.356 41.667 0.00 0.00 0.00 2.43
1745 1782 5.126707 GCTCATCTGATTCATGGAGGTTTTT 59.873 40.000 0.00 0.00 0.00 1.94
1746 1783 6.519679 TCATCTGATTCATGGAGGTTTTTG 57.480 37.500 0.00 0.00 0.00 2.44
1758 1795 8.097662 TCATGGAGGTTTTTGTTTGTTTAACTT 58.902 29.630 0.00 0.00 37.64 2.66
1807 1844 3.857052 TGCTAATAGAACCGTCCTTGTG 58.143 45.455 0.00 0.00 0.00 3.33
1820 1857 4.679654 CCGTCCTTGTGTCTTAATTTTTGC 59.320 41.667 0.00 0.00 0.00 3.68
2082 2129 6.837568 ACGGAATAGGGTAAGACTCTTTCATA 59.162 38.462 0.00 0.00 27.79 2.15
2083 2130 7.343833 ACGGAATAGGGTAAGACTCTTTCATAA 59.656 37.037 0.00 0.00 27.79 1.90
2388 2921 8.032451 ACTGTGTGCTGTATTTGTTTTACTTTT 58.968 29.630 0.00 0.00 0.00 2.27
2479 3013 8.747538 AATTTTACAAGGTCACTGTAGTTTCT 57.252 30.769 0.00 0.00 0.00 2.52
3166 3909 4.261867 GGTGACTGGTTTGGTTTTATCACC 60.262 45.833 4.46 4.46 45.76 4.02
3170 3915 4.340950 ACTGGTTTGGTTTTATCACCTGTG 59.659 41.667 0.00 0.00 38.03 3.66
3173 3918 5.187967 TGGTTTGGTTTTATCACCTGTGTTT 59.812 36.000 0.00 0.00 37.75 2.83
3175 3920 6.036626 GGTTTGGTTTTATCACCTGTGTTTTG 59.963 38.462 0.00 0.00 37.75 2.44
3176 3921 5.923733 TGGTTTTATCACCTGTGTTTTGT 57.076 34.783 0.00 0.00 37.75 2.83
3191 3936 6.062749 TGTGTTTTGTTAAGGTGTATGCCTA 58.937 36.000 0.00 0.00 38.03 3.93
3200 3945 2.105477 AGGTGTATGCCTATTGCCTGAG 59.895 50.000 0.00 0.00 40.16 3.35
3202 3947 3.134458 GTGTATGCCTATTGCCTGAGAC 58.866 50.000 0.00 0.00 40.16 3.36
3207 3953 3.107601 TGCCTATTGCCTGAGACTACTT 58.892 45.455 0.00 0.00 40.16 2.24
3208 3954 4.286707 TGCCTATTGCCTGAGACTACTTA 58.713 43.478 0.00 0.00 40.16 2.24
3209 3955 4.901849 TGCCTATTGCCTGAGACTACTTAT 59.098 41.667 0.00 0.00 40.16 1.73
3304 4050 1.447643 CTGGGGCAGGATTCTACCG 59.552 63.158 0.00 0.00 34.73 4.02
3410 4157 7.829211 TGTTTTCTAGGGAGAATATCAAACTGG 59.171 37.037 0.00 0.00 41.40 4.00
3413 4160 4.429854 AGGGAGAATATCAAACTGGAGC 57.570 45.455 0.00 0.00 0.00 4.70
3636 4391 5.704515 AGTGCAGCTGACCATATAATTCATC 59.295 40.000 20.43 0.00 0.00 2.92
3791 4709 6.463995 ACTGAAAATGTTGGCTTCTTTACA 57.536 33.333 0.00 0.00 0.00 2.41
3876 4796 3.182967 GGCAAGTATTCTCTGACTGACG 58.817 50.000 0.00 0.00 0.00 4.35
3884 4804 7.607250 AGTATTCTCTGACTGACGAAAAGAAT 58.393 34.615 0.00 0.00 36.34 2.40
3899 4819 7.912383 ACGAAAAGAATTCGACAAAGAAACTA 58.088 30.769 16.46 0.00 43.97 2.24
3900 4820 8.062448 ACGAAAAGAATTCGACAAAGAAACTAG 58.938 33.333 16.46 0.00 43.97 2.57
4158 5359 0.250553 TGCCCTCAAAGGTAACACCG 60.251 55.000 0.00 0.00 44.90 4.94
4233 6051 4.694233 CGAGTGTGGGCTGCTGCT 62.694 66.667 15.64 0.00 39.59 4.24
4234 6052 3.054503 GAGTGTGGGCTGCTGCTG 61.055 66.667 15.64 0.77 39.59 4.41
4265 6083 3.228453 ACTGAAGAAAGTAGGACGGTCA 58.772 45.455 10.76 0.00 0.00 4.02
4316 6359 4.553323 CAGAACAAGGCAAAGAAGGAATG 58.447 43.478 0.00 0.00 0.00 2.67
4317 6360 3.006217 AGAACAAGGCAAAGAAGGAATGC 59.994 43.478 0.00 0.00 39.33 3.56
4319 6362 2.901839 ACAAGGCAAAGAAGGAATGCAT 59.098 40.909 0.00 0.00 41.80 3.96
4396 6439 5.397221 CCCAGAGAGAAGCAGAAATTATCCA 60.397 44.000 0.00 0.00 0.00 3.41
4411 6454 0.906282 ATCCAACCCCGAGTAACCGT 60.906 55.000 0.00 0.00 0.00 4.83
4514 6560 3.405831 TCGACCGTACCATCGAATAGAT 58.594 45.455 12.38 0.00 43.97 1.98
4595 6641 4.549871 CGAAAAGTTTTTGTGGGCGATTTG 60.550 41.667 1.64 0.00 0.00 2.32
4674 6721 2.303022 TCAAACAGGGAGTCTTAGCTGG 59.697 50.000 0.00 0.00 0.00 4.85
4678 6725 2.303311 ACAGGGAGTCTTAGCTGGAAAC 59.697 50.000 0.00 0.00 0.00 2.78
4852 6928 7.446013 AGTTCGGAGTGTTATAAAAATGTTCCA 59.554 33.333 0.00 0.00 0.00 3.53
4963 7041 8.328146 CACCGTATATTAGACAAATGTTCACTG 58.672 37.037 0.00 0.00 0.00 3.66
4972 7050 6.775088 AGACAAATGTTCACTGTATATTGCG 58.225 36.000 0.00 0.00 0.00 4.85
4978 7056 6.795098 TGTTCACTGTATATTGCGAAAACT 57.205 33.333 0.00 0.00 0.00 2.66
5039 7118 7.720442 AGGAACCAAAATCTCAAAGAAGAAAG 58.280 34.615 0.00 0.00 0.00 2.62
5052 7131 9.341899 CTCAAAGAAGAAAGAGAAAAACGAAAA 57.658 29.630 0.00 0.00 0.00 2.29
5115 7204 1.103398 GCGTCAAATAGGCCAGCCAT 61.103 55.000 12.03 0.00 38.92 4.40
5116 7205 0.947244 CGTCAAATAGGCCAGCCATC 59.053 55.000 12.03 0.00 38.92 3.51
5117 7206 1.475751 CGTCAAATAGGCCAGCCATCT 60.476 52.381 12.03 0.00 38.92 2.90
5118 7207 2.659428 GTCAAATAGGCCAGCCATCTT 58.341 47.619 12.03 0.00 38.92 2.40
5119 7208 2.360165 GTCAAATAGGCCAGCCATCTTG 59.640 50.000 12.03 10.33 38.92 3.02
5120 7209 1.068127 CAAATAGGCCAGCCATCTTGC 59.932 52.381 12.03 0.00 38.92 4.01
5123 7212 2.832201 GGCCAGCCATCTTGCCTC 60.832 66.667 3.12 0.00 45.11 4.70
5124 7213 3.207669 GCCAGCCATCTTGCCTCG 61.208 66.667 0.00 0.00 0.00 4.63
5125 7214 3.207669 CCAGCCATCTTGCCTCGC 61.208 66.667 0.00 0.00 0.00 5.03
5126 7215 2.437180 CAGCCATCTTGCCTCGCA 60.437 61.111 0.00 0.00 36.47 5.10
5127 7216 2.437359 AGCCATCTTGCCTCGCAC 60.437 61.111 0.00 0.00 38.71 5.34
5128 7217 2.437359 GCCATCTTGCCTCGCACT 60.437 61.111 0.00 0.00 38.71 4.40
5129 7218 2.042831 GCCATCTTGCCTCGCACTT 61.043 57.895 0.00 0.00 38.71 3.16
5130 7219 1.986575 GCCATCTTGCCTCGCACTTC 61.987 60.000 0.00 0.00 38.71 3.01
5131 7220 0.674581 CCATCTTGCCTCGCACTTCA 60.675 55.000 0.00 0.00 38.71 3.02
5132 7221 0.725686 CATCTTGCCTCGCACTTCAG 59.274 55.000 0.00 0.00 38.71 3.02
5133 7222 1.023513 ATCTTGCCTCGCACTTCAGC 61.024 55.000 0.00 0.00 38.71 4.26
5134 7223 1.962822 CTTGCCTCGCACTTCAGCA 60.963 57.895 0.00 0.00 38.71 4.41
5135 7224 1.509644 CTTGCCTCGCACTTCAGCAA 61.510 55.000 0.00 0.00 38.71 3.91
5136 7225 1.100463 TTGCCTCGCACTTCAGCAAA 61.100 50.000 0.00 0.00 40.26 3.68
5137 7226 1.208614 GCCTCGCACTTCAGCAAAG 59.791 57.895 0.00 0.00 41.08 2.77
5138 7227 1.230635 GCCTCGCACTTCAGCAAAGA 61.231 55.000 5.93 0.00 38.44 2.52
5139 7228 0.514691 CCTCGCACTTCAGCAAAGAC 59.485 55.000 5.93 0.00 38.44 3.01
5140 7229 0.162507 CTCGCACTTCAGCAAAGACG 59.837 55.000 5.93 8.61 38.44 4.18
5141 7230 1.439365 CGCACTTCAGCAAAGACGC 60.439 57.895 5.93 6.84 38.44 5.19
5142 7231 1.439365 GCACTTCAGCAAAGACGCG 60.439 57.895 3.53 3.53 38.44 6.01
5143 7232 1.934463 CACTTCAGCAAAGACGCGT 59.066 52.632 13.85 13.85 38.44 6.01
5144 7233 0.111089 CACTTCAGCAAAGACGCGTC 60.111 55.000 31.30 31.30 38.44 5.19
5145 7234 0.529773 ACTTCAGCAAAGACGCGTCA 60.530 50.000 37.85 15.41 38.44 4.35
5146 7235 0.162507 CTTCAGCAAAGACGCGTCAG 59.837 55.000 37.85 27.24 37.12 3.51
5147 7236 0.249280 TTCAGCAAAGACGCGTCAGA 60.249 50.000 37.85 22.11 36.85 3.27
5148 7237 0.939577 TCAGCAAAGACGCGTCAGAC 60.940 55.000 37.85 24.10 36.85 3.51
5149 7238 1.664965 AGCAAAGACGCGTCAGACC 60.665 57.895 37.85 23.25 36.85 3.85
5150 7239 1.954146 GCAAAGACGCGTCAGACCA 60.954 57.895 37.85 0.00 0.00 4.02
5151 7240 1.853319 CAAAGACGCGTCAGACCAC 59.147 57.895 37.85 12.94 0.00 4.16
5152 7241 1.660575 AAAGACGCGTCAGACCACG 60.661 57.895 37.85 8.69 42.95 4.94
5153 7242 3.553437 AAGACGCGTCAGACCACGG 62.553 63.158 37.85 0.00 40.29 4.94
5167 7256 4.371417 ACGGGGCGTGGTCTCCTA 62.371 66.667 0.00 0.00 39.18 2.94
5168 7257 2.838225 CGGGGCGTGGTCTCCTAT 60.838 66.667 0.00 0.00 0.00 2.57
5169 7258 2.432300 CGGGGCGTGGTCTCCTATT 61.432 63.158 0.00 0.00 0.00 1.73
5170 7259 1.912971 GGGGCGTGGTCTCCTATTT 59.087 57.895 0.00 0.00 0.00 1.40
5171 7260 1.125633 GGGGCGTGGTCTCCTATTTA 58.874 55.000 0.00 0.00 0.00 1.40
5172 7261 1.070289 GGGGCGTGGTCTCCTATTTAG 59.930 57.143 0.00 0.00 0.00 1.85
5173 7262 1.540580 GGGCGTGGTCTCCTATTTAGC 60.541 57.143 0.00 0.00 0.00 3.09
5174 7263 1.488527 GCGTGGTCTCCTATTTAGCG 58.511 55.000 0.00 0.00 0.00 4.26
5175 7264 1.488527 CGTGGTCTCCTATTTAGCGC 58.511 55.000 0.00 0.00 0.00 5.92
5176 7265 1.488527 GTGGTCTCCTATTTAGCGCG 58.511 55.000 0.00 0.00 0.00 6.86
5177 7266 1.108776 TGGTCTCCTATTTAGCGCGT 58.891 50.000 8.43 0.00 0.00 6.01
5178 7267 2.033801 GTGGTCTCCTATTTAGCGCGTA 59.966 50.000 8.43 0.00 0.00 4.42
5179 7268 2.292569 TGGTCTCCTATTTAGCGCGTAG 59.707 50.000 8.43 0.14 0.00 3.51
5180 7269 2.351544 GGTCTCCTATTTAGCGCGTAGG 60.352 54.545 18.83 18.83 37.03 3.18
5181 7270 2.292845 GTCTCCTATTTAGCGCGTAGGT 59.707 50.000 21.86 1.84 37.01 3.08
5182 7271 2.551459 TCTCCTATTTAGCGCGTAGGTC 59.449 50.000 21.86 0.00 37.01 3.85
5183 7272 1.610522 TCCTATTTAGCGCGTAGGTCC 59.389 52.381 21.86 0.00 37.01 4.46
5184 7273 1.336609 CCTATTTAGCGCGTAGGTCCC 60.337 57.143 8.43 0.00 32.20 4.46
5185 7274 0.311790 TATTTAGCGCGTAGGTCCCG 59.688 55.000 8.43 0.00 0.00 5.14
5186 7275 1.669999 ATTTAGCGCGTAGGTCCCGT 61.670 55.000 8.43 0.00 0.00 5.28
5187 7276 2.546645 TTTAGCGCGTAGGTCCCGTG 62.547 60.000 8.43 0.00 38.76 4.94
5189 7278 4.729856 GCGCGTAGGTCCCGTGTT 62.730 66.667 8.43 0.00 38.06 3.32
5190 7279 2.876955 CGCGTAGGTCCCGTGTTA 59.123 61.111 0.00 0.00 0.00 2.41
5191 7280 1.226491 CGCGTAGGTCCCGTGTTAG 60.226 63.158 0.00 0.00 0.00 2.34
5192 7281 1.517913 GCGTAGGTCCCGTGTTAGC 60.518 63.158 0.00 0.00 0.00 3.09
5193 7282 1.140375 CGTAGGTCCCGTGTTAGCC 59.860 63.158 0.00 0.00 0.00 3.93
5194 7283 1.597797 CGTAGGTCCCGTGTTAGCCA 61.598 60.000 0.00 0.00 0.00 4.75
5195 7284 0.108472 GTAGGTCCCGTGTTAGCCAC 60.108 60.000 0.00 0.00 40.89 5.01
5196 7285 1.259840 TAGGTCCCGTGTTAGCCACC 61.260 60.000 0.00 0.00 41.26 4.61
5197 7286 2.745037 GTCCCGTGTTAGCCACCA 59.255 61.111 0.00 0.00 41.26 4.17
5198 7287 1.071814 GTCCCGTGTTAGCCACCAA 59.928 57.895 0.00 0.00 41.26 3.67
5199 7288 0.535553 GTCCCGTGTTAGCCACCAAA 60.536 55.000 0.00 0.00 41.26 3.28
5200 7289 0.535553 TCCCGTGTTAGCCACCAAAC 60.536 55.000 0.00 0.00 41.26 2.93
5201 7290 1.572447 CCGTGTTAGCCACCAAACG 59.428 57.895 0.00 0.00 41.26 3.60
5202 7291 0.881159 CCGTGTTAGCCACCAAACGA 60.881 55.000 0.00 0.00 41.26 3.85
5203 7292 0.511221 CGTGTTAGCCACCAAACGAG 59.489 55.000 0.00 0.00 41.26 4.18
5204 7293 1.589803 GTGTTAGCCACCAAACGAGT 58.410 50.000 0.00 0.00 38.18 4.18
5205 7294 2.758009 GTGTTAGCCACCAAACGAGTA 58.242 47.619 0.00 0.00 38.18 2.59
5206 7295 2.477754 GTGTTAGCCACCAAACGAGTAC 59.522 50.000 0.00 0.00 38.18 2.73
5207 7296 2.071540 GTTAGCCACCAAACGAGTACC 58.928 52.381 0.00 0.00 0.00 3.34
5208 7297 0.609662 TAGCCACCAAACGAGTACCC 59.390 55.000 0.00 0.00 0.00 3.69
5209 7298 1.125711 AGCCACCAAACGAGTACCCT 61.126 55.000 0.00 0.00 0.00 4.34
5210 7299 0.672711 GCCACCAAACGAGTACCCTC 60.673 60.000 0.00 0.00 0.00 4.30
5211 7300 0.036671 CCACCAAACGAGTACCCTCC 60.037 60.000 0.00 0.00 33.93 4.30
5212 7301 0.036671 CACCAAACGAGTACCCTCCC 60.037 60.000 0.00 0.00 33.93 4.30
5213 7302 1.217244 CCAAACGAGTACCCTCCCG 59.783 63.158 0.00 0.00 33.93 5.14
5214 7303 1.447314 CAAACGAGTACCCTCCCGC 60.447 63.158 0.00 0.00 33.93 6.13
5215 7304 2.653087 AAACGAGTACCCTCCCGCC 61.653 63.158 0.00 0.00 33.93 6.13
5217 7306 4.835891 CGAGTACCCTCCCGCCCT 62.836 72.222 0.00 0.00 33.93 5.19
5218 7307 2.365237 GAGTACCCTCCCGCCCTT 60.365 66.667 0.00 0.00 0.00 3.95
5219 7308 2.365237 AGTACCCTCCCGCCCTTC 60.365 66.667 0.00 0.00 0.00 3.46
5220 7309 3.477346 GTACCCTCCCGCCCTTCC 61.477 72.222 0.00 0.00 0.00 3.46
5221 7310 3.691326 TACCCTCCCGCCCTTCCT 61.691 66.667 0.00 0.00 0.00 3.36
5222 7311 2.326974 TACCCTCCCGCCCTTCCTA 61.327 63.158 0.00 0.00 0.00 2.94
5223 7312 2.308118 TACCCTCCCGCCCTTCCTAG 62.308 65.000 0.00 0.00 0.00 3.02
5224 7313 3.551407 CCTCCCGCCCTTCCTAGC 61.551 72.222 0.00 0.00 0.00 3.42
5230 7319 4.829588 GCCCTTCCTAGCGTACAC 57.170 61.111 0.00 0.00 0.00 2.90
5231 7320 2.200052 GCCCTTCCTAGCGTACACT 58.800 57.895 0.00 0.00 0.00 3.55
5232 7321 0.535797 GCCCTTCCTAGCGTACACTT 59.464 55.000 0.00 0.00 0.00 3.16
5233 7322 1.739371 GCCCTTCCTAGCGTACACTTG 60.739 57.143 0.00 0.00 0.00 3.16
5234 7323 1.822990 CCCTTCCTAGCGTACACTTGA 59.177 52.381 0.00 0.00 0.00 3.02
5235 7324 2.159226 CCCTTCCTAGCGTACACTTGAG 60.159 54.545 0.00 0.00 0.00 3.02
5236 7325 2.531206 CTTCCTAGCGTACACTTGAGC 58.469 52.381 0.00 0.00 0.00 4.26
5237 7326 0.815734 TCCTAGCGTACACTTGAGCC 59.184 55.000 0.00 0.00 0.00 4.70
5238 7327 0.530744 CCTAGCGTACACTTGAGCCA 59.469 55.000 0.00 0.00 0.00 4.75
5239 7328 1.469940 CCTAGCGTACACTTGAGCCAG 60.470 57.143 0.00 0.00 0.00 4.85
5240 7329 1.202582 CTAGCGTACACTTGAGCCAGT 59.797 52.381 0.00 0.00 0.00 4.00
5241 7330 0.038159 AGCGTACACTTGAGCCAGTC 60.038 55.000 0.00 0.00 0.00 3.51
5242 7331 1.014564 GCGTACACTTGAGCCAGTCC 61.015 60.000 0.00 0.00 0.00 3.85
5243 7332 0.317160 CGTACACTTGAGCCAGTCCA 59.683 55.000 0.00 0.00 0.00 4.02
5244 7333 1.270094 CGTACACTTGAGCCAGTCCAA 60.270 52.381 0.00 0.00 0.00 3.53
5245 7334 2.417719 GTACACTTGAGCCAGTCCAAG 58.582 52.381 0.00 0.00 43.84 3.61
5246 7335 1.131638 ACACTTGAGCCAGTCCAAGA 58.868 50.000 8.83 0.00 41.56 3.02
5247 7336 1.490490 ACACTTGAGCCAGTCCAAGAA 59.510 47.619 8.83 0.00 41.56 2.52
5248 7337 2.149578 CACTTGAGCCAGTCCAAGAAG 58.850 52.381 8.83 0.00 41.56 2.85
5249 7338 1.771255 ACTTGAGCCAGTCCAAGAAGT 59.229 47.619 8.83 0.00 41.56 3.01
5250 7339 2.173569 ACTTGAGCCAGTCCAAGAAGTT 59.826 45.455 8.83 0.00 41.56 2.66
5251 7340 3.217626 CTTGAGCCAGTCCAAGAAGTTT 58.782 45.455 0.00 0.00 41.56 2.66
5252 7341 2.851195 TGAGCCAGTCCAAGAAGTTTC 58.149 47.619 0.00 0.00 0.00 2.78
5253 7342 2.439507 TGAGCCAGTCCAAGAAGTTTCT 59.560 45.455 0.00 0.00 39.74 2.52
5255 7344 3.885901 GAGCCAGTCCAAGAAGTTTCTTT 59.114 43.478 4.43 0.00 44.70 2.52
5256 7345 4.281657 AGCCAGTCCAAGAAGTTTCTTTT 58.718 39.130 4.43 0.00 44.70 2.27
5257 7346 4.339530 AGCCAGTCCAAGAAGTTTCTTTTC 59.660 41.667 4.43 0.00 44.70 2.29
5258 7347 4.789802 GCCAGTCCAAGAAGTTTCTTTTCG 60.790 45.833 4.43 0.00 44.70 3.46
5259 7348 4.261197 CCAGTCCAAGAAGTTTCTTTTCGG 60.261 45.833 4.43 4.22 44.70 4.30
5260 7349 4.335594 CAGTCCAAGAAGTTTCTTTTCGGT 59.664 41.667 4.43 0.00 44.70 4.69
5261 7350 4.948004 AGTCCAAGAAGTTTCTTTTCGGTT 59.052 37.500 4.43 0.00 44.70 4.44
5262 7351 5.417894 AGTCCAAGAAGTTTCTTTTCGGTTT 59.582 36.000 4.43 0.00 44.70 3.27
5263 7352 6.071560 AGTCCAAGAAGTTTCTTTTCGGTTTT 60.072 34.615 4.43 0.00 44.70 2.43
5264 7353 6.034577 GTCCAAGAAGTTTCTTTTCGGTTTTG 59.965 38.462 4.43 0.00 44.70 2.44
5265 7354 5.290885 CCAAGAAGTTTCTTTTCGGTTTTGG 59.709 40.000 4.43 0.00 44.70 3.28
5266 7355 5.006153 AGAAGTTTCTTTTCGGTTTTGGG 57.994 39.130 0.00 0.00 32.55 4.12
5267 7356 4.707934 AGAAGTTTCTTTTCGGTTTTGGGA 59.292 37.500 0.00 0.00 32.55 4.37
5268 7357 5.362717 AGAAGTTTCTTTTCGGTTTTGGGAT 59.637 36.000 0.00 0.00 32.55 3.85
5269 7358 4.944048 AGTTTCTTTTCGGTTTTGGGATG 58.056 39.130 0.00 0.00 0.00 3.51
5270 7359 4.055360 GTTTCTTTTCGGTTTTGGGATGG 58.945 43.478 0.00 0.00 0.00 3.51
5271 7360 2.952116 TCTTTTCGGTTTTGGGATGGT 58.048 42.857 0.00 0.00 0.00 3.55
5272 7361 2.625790 TCTTTTCGGTTTTGGGATGGTG 59.374 45.455 0.00 0.00 0.00 4.17
5273 7362 2.074729 TTTCGGTTTTGGGATGGTGT 57.925 45.000 0.00 0.00 0.00 4.16
5274 7363 2.074729 TTCGGTTTTGGGATGGTGTT 57.925 45.000 0.00 0.00 0.00 3.32
5275 7364 2.953284 TCGGTTTTGGGATGGTGTTA 57.047 45.000 0.00 0.00 0.00 2.41
5276 7365 2.785562 TCGGTTTTGGGATGGTGTTAG 58.214 47.619 0.00 0.00 0.00 2.34
5277 7366 2.372504 TCGGTTTTGGGATGGTGTTAGA 59.627 45.455 0.00 0.00 0.00 2.10
5278 7367 2.747446 CGGTTTTGGGATGGTGTTAGAG 59.253 50.000 0.00 0.00 0.00 2.43
5279 7368 3.558321 CGGTTTTGGGATGGTGTTAGAGA 60.558 47.826 0.00 0.00 0.00 3.10
5280 7369 3.756963 GGTTTTGGGATGGTGTTAGAGAC 59.243 47.826 0.00 0.00 0.00 3.36
5281 7370 3.713826 TTTGGGATGGTGTTAGAGACC 57.286 47.619 0.00 0.00 0.00 3.85
5282 7371 2.642171 TGGGATGGTGTTAGAGACCT 57.358 50.000 0.00 0.00 34.26 3.85
5283 7372 2.915869 TGGGATGGTGTTAGAGACCTT 58.084 47.619 0.00 0.00 34.26 3.50
5284 7373 3.256704 TGGGATGGTGTTAGAGACCTTT 58.743 45.455 0.00 0.00 34.26 3.11
5285 7374 3.655777 TGGGATGGTGTTAGAGACCTTTT 59.344 43.478 0.00 0.00 34.26 2.27
5286 7375 4.105697 TGGGATGGTGTTAGAGACCTTTTT 59.894 41.667 0.00 0.00 34.26 1.94
5305 7394 5.576447 TTTTTCTGTTTTCTTTCGCCTCT 57.424 34.783 0.00 0.00 0.00 3.69
5306 7395 5.576447 TTTTCTGTTTTCTTTCGCCTCTT 57.424 34.783 0.00 0.00 0.00 2.85
5307 7396 5.576447 TTTCTGTTTTCTTTCGCCTCTTT 57.424 34.783 0.00 0.00 0.00 2.52
5308 7397 5.576447 TTCTGTTTTCTTTCGCCTCTTTT 57.424 34.783 0.00 0.00 0.00 2.27
5309 7398 5.169836 TCTGTTTTCTTTCGCCTCTTTTC 57.830 39.130 0.00 0.00 0.00 2.29
5310 7399 4.881850 TCTGTTTTCTTTCGCCTCTTTTCT 59.118 37.500 0.00 0.00 0.00 2.52
5311 7400 4.920376 TGTTTTCTTTCGCCTCTTTTCTG 58.080 39.130 0.00 0.00 0.00 3.02
5312 7401 3.626028 TTTCTTTCGCCTCTTTTCTGC 57.374 42.857 0.00 0.00 0.00 4.26
5313 7402 1.523758 TCTTTCGCCTCTTTTCTGCC 58.476 50.000 0.00 0.00 0.00 4.85
5314 7403 1.072331 TCTTTCGCCTCTTTTCTGCCT 59.928 47.619 0.00 0.00 0.00 4.75
5315 7404 1.882623 CTTTCGCCTCTTTTCTGCCTT 59.117 47.619 0.00 0.00 0.00 4.35
5316 7405 1.981256 TTCGCCTCTTTTCTGCCTTT 58.019 45.000 0.00 0.00 0.00 3.11
5317 7406 1.981256 TCGCCTCTTTTCTGCCTTTT 58.019 45.000 0.00 0.00 0.00 2.27
5318 7407 2.306847 TCGCCTCTTTTCTGCCTTTTT 58.693 42.857 0.00 0.00 0.00 1.94
5319 7408 2.293399 TCGCCTCTTTTCTGCCTTTTTC 59.707 45.455 0.00 0.00 0.00 2.29
5320 7409 2.034558 CGCCTCTTTTCTGCCTTTTTCA 59.965 45.455 0.00 0.00 0.00 2.69
5321 7410 3.305608 CGCCTCTTTTCTGCCTTTTTCAT 60.306 43.478 0.00 0.00 0.00 2.57
5322 7411 4.240888 GCCTCTTTTCTGCCTTTTTCATC 58.759 43.478 0.00 0.00 0.00 2.92
5323 7412 4.021632 GCCTCTTTTCTGCCTTTTTCATCT 60.022 41.667 0.00 0.00 0.00 2.90
5324 7413 5.510349 GCCTCTTTTCTGCCTTTTTCATCTT 60.510 40.000 0.00 0.00 0.00 2.40
5325 7414 6.155136 CCTCTTTTCTGCCTTTTTCATCTTC 58.845 40.000 0.00 0.00 0.00 2.87
5326 7415 5.762045 TCTTTTCTGCCTTTTTCATCTTCG 58.238 37.500 0.00 0.00 0.00 3.79
5327 7416 5.530915 TCTTTTCTGCCTTTTTCATCTTCGA 59.469 36.000 0.00 0.00 0.00 3.71
5328 7417 5.964958 TTTCTGCCTTTTTCATCTTCGAT 57.035 34.783 0.00 0.00 0.00 3.59
5329 7418 5.964958 TTCTGCCTTTTTCATCTTCGATT 57.035 34.783 0.00 0.00 0.00 3.34
5330 7419 5.964958 TCTGCCTTTTTCATCTTCGATTT 57.035 34.783 0.00 0.00 0.00 2.17
5331 7420 5.942872 TCTGCCTTTTTCATCTTCGATTTC 58.057 37.500 0.00 0.00 0.00 2.17
5332 7421 5.707298 TCTGCCTTTTTCATCTTCGATTTCT 59.293 36.000 0.00 0.00 0.00 2.52
5333 7422 5.942872 TGCCTTTTTCATCTTCGATTTCTC 58.057 37.500 0.00 0.00 0.00 2.87
5334 7423 5.106157 TGCCTTTTTCATCTTCGATTTCTCC 60.106 40.000 0.00 0.00 0.00 3.71
5335 7424 5.124617 GCCTTTTTCATCTTCGATTTCTCCT 59.875 40.000 0.00 0.00 0.00 3.69
5336 7425 6.349694 GCCTTTTTCATCTTCGATTTCTCCTT 60.350 38.462 0.00 0.00 0.00 3.36
5337 7426 7.597386 CCTTTTTCATCTTCGATTTCTCCTTT 58.403 34.615 0.00 0.00 0.00 3.11
5338 7427 8.084684 CCTTTTTCATCTTCGATTTCTCCTTTT 58.915 33.333 0.00 0.00 0.00 2.27
5339 7428 9.468532 CTTTTTCATCTTCGATTTCTCCTTTTT 57.531 29.630 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.451567 CTACAGAGCGGAGGGACGA 60.452 63.158 0.00 0.00 35.47 4.20
6 7 1.033574 CCTAACTACAGAGCGGAGGG 58.966 60.000 0.00 0.00 0.00 4.30
31 32 3.300711 GCACCACGACCTACAGTTT 57.699 52.632 0.00 0.00 0.00 2.66
75 76 2.158623 TGAGGCAGATTTATTCGCCCAT 60.159 45.455 0.00 0.00 41.82 4.00
76 77 1.211703 TGAGGCAGATTTATTCGCCCA 59.788 47.619 0.00 0.00 41.82 5.36
109 110 0.179076 CATGATGAGCACCGCCAGTA 60.179 55.000 0.00 0.00 0.00 2.74
152 153 0.534203 AAGGATCGGCAAACACACGT 60.534 50.000 0.00 0.00 0.00 4.49
180 181 3.587061 ACCATCCATGAACTCTAACACCA 59.413 43.478 0.00 0.00 0.00 4.17
189 190 1.676916 CGCAGACACCATCCATGAACT 60.677 52.381 0.00 0.00 0.00 3.01
240 241 1.494960 GGGACAGAGCAGAAGGAGAT 58.505 55.000 0.00 0.00 0.00 2.75
261 262 2.669569 AGACAACGCCGCAGCAAT 60.670 55.556 0.00 0.00 39.83 3.56
449 451 1.336887 CCTGGACACGTCATCGAACTT 60.337 52.381 0.00 0.00 40.62 2.66
574 577 4.536090 AGACAGATCACCTATTCACCCAAA 59.464 41.667 0.00 0.00 0.00 3.28
576 579 3.706594 GAGACAGATCACCTATTCACCCA 59.293 47.826 0.00 0.00 0.00 4.51
584 587 4.689062 AGGAAAAGGAGACAGATCACCTA 58.311 43.478 0.00 0.00 44.45 3.08
608 611 2.202797 CGCATGTCCCTCTCCACG 60.203 66.667 0.00 0.00 0.00 4.94
653 656 8.547967 AACATCGACATTACAGTACTGAAAAT 57.452 30.769 29.30 22.03 0.00 1.82
662 665 3.064207 ACGCAAACATCGACATTACAGT 58.936 40.909 0.00 0.00 0.00 3.55
680 683 2.076863 AGATTCAGTTACAAGCCACGC 58.923 47.619 0.00 0.00 0.00 5.34
747 751 3.086600 GTCCCTCCCCTCCTGCTG 61.087 72.222 0.00 0.00 0.00 4.41
748 752 2.713111 TTTGTCCCTCCCCTCCTGCT 62.713 60.000 0.00 0.00 0.00 4.24
749 753 1.789576 TTTTGTCCCTCCCCTCCTGC 61.790 60.000 0.00 0.00 0.00 4.85
750 754 0.777446 TTTTTGTCCCTCCCCTCCTG 59.223 55.000 0.00 0.00 0.00 3.86
751 755 3.292264 TTTTTGTCCCTCCCCTCCT 57.708 52.632 0.00 0.00 0.00 3.69
766 770 1.807226 GCCGCCGCTAGGAATTTTT 59.193 52.632 0.00 0.00 41.02 1.94
767 771 2.469516 CGCCGCCGCTAGGAATTTT 61.470 57.895 0.00 0.00 41.02 1.82
768 772 2.895372 CGCCGCCGCTAGGAATTT 60.895 61.111 0.00 0.00 41.02 1.82
769 773 4.910585 CCGCCGCCGCTAGGAATT 62.911 66.667 0.00 0.00 41.02 2.17
787 791 3.435186 GAGCGAGGGTTTGCAGCC 61.435 66.667 1.17 1.17 41.43 4.85
788 792 3.793144 CGAGCGAGGGTTTGCAGC 61.793 66.667 0.00 0.00 36.07 5.25
789 793 1.901650 GAACGAGCGAGGGTTTGCAG 61.902 60.000 0.00 0.00 36.07 4.41
790 794 1.959226 GAACGAGCGAGGGTTTGCA 60.959 57.895 0.00 0.00 36.07 4.08
791 795 2.677979 GGAACGAGCGAGGGTTTGC 61.678 63.158 0.00 0.00 0.00 3.68
792 796 0.245539 TAGGAACGAGCGAGGGTTTG 59.754 55.000 0.00 0.00 0.00 2.93
793 797 0.245813 GTAGGAACGAGCGAGGGTTT 59.754 55.000 0.00 0.00 0.00 3.27
794 798 1.602327 GGTAGGAACGAGCGAGGGTT 61.602 60.000 0.00 0.00 0.00 4.11
795 799 2.050934 GGTAGGAACGAGCGAGGGT 61.051 63.158 0.00 0.00 0.00 4.34
796 800 2.783288 GGGTAGGAACGAGCGAGGG 61.783 68.421 0.00 0.00 30.63 4.30
797 801 2.783288 GGGGTAGGAACGAGCGAGG 61.783 68.421 0.00 0.00 30.63 4.63
798 802 2.783288 GGGGGTAGGAACGAGCGAG 61.783 68.421 0.00 0.00 30.63 5.03
799 803 2.757099 GGGGGTAGGAACGAGCGA 60.757 66.667 0.00 0.00 30.63 4.93
800 804 2.758737 AGGGGGTAGGAACGAGCG 60.759 66.667 0.00 0.00 30.63 5.03
801 805 2.901042 CAGGGGGTAGGAACGAGC 59.099 66.667 0.00 0.00 0.00 5.03
802 806 2.732619 GGCAGGGGGTAGGAACGAG 61.733 68.421 0.00 0.00 0.00 4.18
803 807 2.686106 GGCAGGGGGTAGGAACGA 60.686 66.667 0.00 0.00 0.00 3.85
804 808 4.157120 CGGCAGGGGGTAGGAACG 62.157 72.222 0.00 0.00 0.00 3.95
805 809 1.266867 TAACGGCAGGGGGTAGGAAC 61.267 60.000 0.00 0.00 0.00 3.62
806 810 0.547229 TTAACGGCAGGGGGTAGGAA 60.547 55.000 0.00 0.00 0.00 3.36
807 811 0.979187 CTTAACGGCAGGGGGTAGGA 60.979 60.000 0.00 0.00 0.00 2.94
808 812 0.979187 TCTTAACGGCAGGGGGTAGG 60.979 60.000 0.00 0.00 0.00 3.18
809 813 0.906775 TTCTTAACGGCAGGGGGTAG 59.093 55.000 0.00 0.00 0.00 3.18
810 814 1.360185 TTTCTTAACGGCAGGGGGTA 58.640 50.000 0.00 0.00 0.00 3.69
811 815 0.479378 TTTTCTTAACGGCAGGGGGT 59.521 50.000 0.00 0.00 0.00 4.95
812 816 1.623163 TTTTTCTTAACGGCAGGGGG 58.377 50.000 0.00 0.00 0.00 5.40
840 844 3.534056 GGCAGATGGGCATGGCAC 61.534 66.667 22.06 10.96 41.35 5.01
841 845 4.845447 GGGCAGATGGGCATGGCA 62.845 66.667 22.06 7.72 45.66 4.92
842 846 2.436596 ATAGGGCAGATGGGCATGGC 62.437 60.000 11.56 11.56 45.66 4.40
843 847 0.113776 AATAGGGCAGATGGGCATGG 59.886 55.000 0.00 0.00 45.66 3.66
844 848 1.254026 CAATAGGGCAGATGGGCATG 58.746 55.000 0.00 0.00 45.66 4.06
845 849 0.113776 CCAATAGGGCAGATGGGCAT 59.886 55.000 0.00 0.00 45.66 4.40
846 850 1.288508 ACCAATAGGGCAGATGGGCA 61.289 55.000 0.00 0.00 45.66 5.36
847 851 0.771127 TACCAATAGGGCAGATGGGC 59.229 55.000 0.00 0.00 42.05 5.36
848 852 3.222603 GTTTACCAATAGGGCAGATGGG 58.777 50.000 0.00 0.00 42.05 4.00
849 853 3.222603 GGTTTACCAATAGGGCAGATGG 58.777 50.000 0.00 0.00 42.05 3.51
850 854 3.897239 TGGTTTACCAATAGGGCAGATG 58.103 45.455 0.00 0.00 44.35 2.90
862 866 4.903045 TTTGGGTTTGTTTGGTTTACCA 57.097 36.364 0.00 0.00 45.94 3.25
863 867 5.880887 TGATTTTGGGTTTGTTTGGTTTACC 59.119 36.000 0.00 0.00 0.00 2.85
864 868 6.457663 GCTGATTTTGGGTTTGTTTGGTTTAC 60.458 38.462 0.00 0.00 0.00 2.01
865 869 5.586643 GCTGATTTTGGGTTTGTTTGGTTTA 59.413 36.000 0.00 0.00 0.00 2.01
866 870 4.397730 GCTGATTTTGGGTTTGTTTGGTTT 59.602 37.500 0.00 0.00 0.00 3.27
867 871 3.944650 GCTGATTTTGGGTTTGTTTGGTT 59.055 39.130 0.00 0.00 0.00 3.67
868 872 3.540617 GCTGATTTTGGGTTTGTTTGGT 58.459 40.909 0.00 0.00 0.00 3.67
869 873 2.543430 CGCTGATTTTGGGTTTGTTTGG 59.457 45.455 0.00 0.00 0.00 3.28
870 874 3.194062 ACGCTGATTTTGGGTTTGTTTG 58.806 40.909 0.00 0.00 0.00 2.93
871 875 3.535280 ACGCTGATTTTGGGTTTGTTT 57.465 38.095 0.00 0.00 0.00 2.83
872 876 3.194062 CAACGCTGATTTTGGGTTTGTT 58.806 40.909 0.00 0.00 38.27 2.83
873 877 2.167487 ACAACGCTGATTTTGGGTTTGT 59.833 40.909 0.00 0.00 38.27 2.83
874 878 2.794350 GACAACGCTGATTTTGGGTTTG 59.206 45.455 0.00 0.00 38.27 2.93
875 879 2.223947 GGACAACGCTGATTTTGGGTTT 60.224 45.455 0.00 0.00 38.27 3.27
876 880 1.339929 GGACAACGCTGATTTTGGGTT 59.660 47.619 0.00 0.00 40.41 4.11
877 881 0.958822 GGACAACGCTGATTTTGGGT 59.041 50.000 0.00 0.00 0.00 4.51
878 882 0.243636 GGGACAACGCTGATTTTGGG 59.756 55.000 0.00 0.00 0.00 4.12
879 883 0.243636 GGGGACAACGCTGATTTTGG 59.756 55.000 0.00 0.00 0.00 3.28
880 884 1.200020 GAGGGGACAACGCTGATTTTG 59.800 52.381 0.00 0.00 43.22 2.44
881 885 1.534729 GAGGGGACAACGCTGATTTT 58.465 50.000 0.00 0.00 43.22 1.82
882 886 0.322546 GGAGGGGACAACGCTGATTT 60.323 55.000 0.00 0.00 43.22 2.17
883 887 1.299976 GGAGGGGACAACGCTGATT 59.700 57.895 0.00 0.00 43.22 2.57
884 888 1.903877 CTGGAGGGGACAACGCTGAT 61.904 60.000 0.00 0.00 43.22 2.90
885 889 2.525629 TGGAGGGGACAACGCTGA 60.526 61.111 0.00 0.00 43.22 4.26
886 890 2.046892 CTGGAGGGGACAACGCTG 60.047 66.667 0.00 0.00 43.22 5.18
887 891 3.322466 CCTGGAGGGGACAACGCT 61.322 66.667 0.00 0.00 46.25 5.07
889 893 4.410400 GGCCTGGAGGGGACAACG 62.410 72.222 0.00 0.00 33.76 4.10
890 894 4.048470 GGGCCTGGAGGGGACAAC 62.048 72.222 0.84 0.00 35.71 3.32
891 895 4.285790 AGGGCCTGGAGGGGACAA 62.286 66.667 4.50 0.00 35.71 3.18
892 896 4.741239 GAGGGCCTGGAGGGGACA 62.741 72.222 12.95 0.00 35.71 4.02
897 901 4.787280 AGTCGGAGGGCCTGGAGG 62.787 72.222 12.95 0.00 38.53 4.30
898 902 3.465403 CAGTCGGAGGGCCTGGAG 61.465 72.222 12.95 1.15 0.00 3.86
901 905 1.915078 ATTTCCAGTCGGAGGGCCTG 61.915 60.000 12.95 0.00 44.10 4.85
902 906 1.208165 AATTTCCAGTCGGAGGGCCT 61.208 55.000 5.25 5.25 44.10 5.19
903 907 0.748367 GAATTTCCAGTCGGAGGGCC 60.748 60.000 0.00 0.00 44.10 5.80
904 908 1.090052 CGAATTTCCAGTCGGAGGGC 61.090 60.000 0.00 0.00 44.10 5.19
905 909 0.249398 ACGAATTTCCAGTCGGAGGG 59.751 55.000 0.00 0.00 44.84 4.30
906 910 1.641577 GACGAATTTCCAGTCGGAGG 58.358 55.000 0.00 0.00 44.84 4.30
907 911 1.204941 AGGACGAATTTCCAGTCGGAG 59.795 52.381 0.00 0.00 44.84 4.63
908 912 1.067142 CAGGACGAATTTCCAGTCGGA 60.067 52.381 0.00 0.00 44.84 4.55
909 913 1.359848 CAGGACGAATTTCCAGTCGG 58.640 55.000 0.00 0.00 44.84 4.79
910 914 1.359848 CCAGGACGAATTTCCAGTCG 58.640 55.000 0.00 0.00 46.01 4.18
911 915 1.087501 GCCAGGACGAATTTCCAGTC 58.912 55.000 0.00 0.00 38.25 3.51
912 916 0.693049 AGCCAGGACGAATTTCCAGT 59.307 50.000 0.00 0.00 38.25 4.00
913 917 1.740025 GAAGCCAGGACGAATTTCCAG 59.260 52.381 0.00 0.00 38.25 3.86
914 918 1.613255 GGAAGCCAGGACGAATTTCCA 60.613 52.381 0.00 0.00 38.25 3.53
915 919 1.095600 GGAAGCCAGGACGAATTTCC 58.904 55.000 0.00 0.00 35.66 3.13
916 920 1.095600 GGGAAGCCAGGACGAATTTC 58.904 55.000 0.00 0.00 0.00 2.17
917 921 0.404040 TGGGAAGCCAGGACGAATTT 59.596 50.000 0.00 0.00 0.00 1.82
918 922 0.404040 TTGGGAAGCCAGGACGAATT 59.596 50.000 0.00 0.00 0.00 2.17
919 923 0.404040 TTTGGGAAGCCAGGACGAAT 59.596 50.000 0.00 0.00 0.00 3.34
920 924 0.536460 GTTTGGGAAGCCAGGACGAA 60.536 55.000 0.00 0.00 0.00 3.85
921 925 1.072505 GTTTGGGAAGCCAGGACGA 59.927 57.895 0.00 0.00 0.00 4.20
922 926 1.971695 GGTTTGGGAAGCCAGGACG 60.972 63.158 0.00 0.00 0.00 4.79
923 927 4.097218 GGTTTGGGAAGCCAGGAC 57.903 61.111 0.00 0.00 0.00 3.85
929 933 2.561037 CGGTGTGGGTTTGGGAAGC 61.561 63.158 0.00 0.00 0.00 3.86
930 934 2.561037 GCGGTGTGGGTTTGGGAAG 61.561 63.158 0.00 0.00 0.00 3.46
931 935 2.519780 GCGGTGTGGGTTTGGGAA 60.520 61.111 0.00 0.00 0.00 3.97
932 936 4.589675 GGCGGTGTGGGTTTGGGA 62.590 66.667 0.00 0.00 0.00 4.37
933 937 4.596585 AGGCGGTGTGGGTTTGGG 62.597 66.667 0.00 0.00 0.00 4.12
934 938 2.983592 GAGGCGGTGTGGGTTTGG 60.984 66.667 0.00 0.00 0.00 3.28
935 939 2.983592 GGAGGCGGTGTGGGTTTG 60.984 66.667 0.00 0.00 0.00 2.93
936 940 3.175710 AGGAGGCGGTGTGGGTTT 61.176 61.111 0.00 0.00 0.00 3.27
937 941 3.637273 GAGGAGGCGGTGTGGGTT 61.637 66.667 0.00 0.00 0.00 4.11
947 951 4.537433 ATTGGAGCGCGAGGAGGC 62.537 66.667 12.10 0.00 0.00 4.70
948 952 2.279784 GATTGGAGCGCGAGGAGG 60.280 66.667 12.10 0.00 0.00 4.30
949 953 2.279784 GGATTGGAGCGCGAGGAG 60.280 66.667 12.10 0.00 0.00 3.69
950 954 2.369257 GATGGATTGGAGCGCGAGGA 62.369 60.000 12.10 0.00 0.00 3.71
951 955 1.958205 GATGGATTGGAGCGCGAGG 60.958 63.158 12.10 0.00 0.00 4.63
952 956 2.305853 CGATGGATTGGAGCGCGAG 61.306 63.158 12.10 0.00 0.00 5.03
953 957 2.279451 CGATGGATTGGAGCGCGA 60.279 61.111 12.10 0.00 0.00 5.87
954 958 1.428370 TTTCGATGGATTGGAGCGCG 61.428 55.000 0.00 0.00 0.00 6.86
955 959 0.947244 ATTTCGATGGATTGGAGCGC 59.053 50.000 0.00 0.00 0.00 5.92
956 960 1.532868 GGATTTCGATGGATTGGAGCG 59.467 52.381 0.00 0.00 0.00 5.03
957 961 2.575532 TGGATTTCGATGGATTGGAGC 58.424 47.619 0.00 0.00 0.00 4.70
958 962 4.202441 AGTTGGATTTCGATGGATTGGAG 58.798 43.478 0.00 0.00 0.00 3.86
959 963 4.235079 AGTTGGATTTCGATGGATTGGA 57.765 40.909 0.00 0.00 0.00 3.53
960 964 6.265577 GTTTAGTTGGATTTCGATGGATTGG 58.734 40.000 0.00 0.00 0.00 3.16
961 965 6.265577 GGTTTAGTTGGATTTCGATGGATTG 58.734 40.000 0.00 0.00 0.00 2.67
962 966 5.359860 GGGTTTAGTTGGATTTCGATGGATT 59.640 40.000 0.00 0.00 0.00 3.01
963 967 4.887655 GGGTTTAGTTGGATTTCGATGGAT 59.112 41.667 0.00 0.00 0.00 3.41
964 968 4.018779 AGGGTTTAGTTGGATTTCGATGGA 60.019 41.667 0.00 0.00 0.00 3.41
965 969 4.270008 AGGGTTTAGTTGGATTTCGATGG 58.730 43.478 0.00 0.00 0.00 3.51
966 970 5.007724 GCTAGGGTTTAGTTGGATTTCGATG 59.992 44.000 0.00 0.00 0.00 3.84
967 971 5.104485 AGCTAGGGTTTAGTTGGATTTCGAT 60.104 40.000 0.00 0.00 0.00 3.59
968 972 4.224370 AGCTAGGGTTTAGTTGGATTTCGA 59.776 41.667 0.00 0.00 0.00 3.71
969 973 4.514401 AGCTAGGGTTTAGTTGGATTTCG 58.486 43.478 0.00 0.00 0.00 3.46
970 974 6.038382 GCTTAGCTAGGGTTTAGTTGGATTTC 59.962 42.308 4.88 0.00 0.00 2.17
971 975 5.886474 GCTTAGCTAGGGTTTAGTTGGATTT 59.114 40.000 4.88 0.00 0.00 2.17
972 976 5.191921 AGCTTAGCTAGGGTTTAGTTGGATT 59.808 40.000 4.30 0.00 36.99 3.01
973 977 4.722279 AGCTTAGCTAGGGTTTAGTTGGAT 59.278 41.667 4.30 0.00 36.99 3.41
974 978 4.101856 AGCTTAGCTAGGGTTTAGTTGGA 58.898 43.478 4.30 0.00 36.99 3.53
975 979 4.489306 AGCTTAGCTAGGGTTTAGTTGG 57.511 45.455 4.30 0.00 36.99 3.77
1001 1005 3.829044 CCGACGCCATACCGGACA 61.829 66.667 9.46 0.00 45.58 4.02
1002 1006 3.480225 CTCCGACGCCATACCGGAC 62.480 68.421 9.46 0.00 46.17 4.79
1006 1010 4.603946 GCCCTCCGACGCCATACC 62.604 72.222 0.00 0.00 0.00 2.73
1051 1061 3.153270 GATTCTCCCCCTCCGTCGC 62.153 68.421 0.00 0.00 0.00 5.19
1054 1064 2.066999 GCTGATTCTCCCCCTCCGT 61.067 63.158 0.00 0.00 0.00 4.69
1063 1073 0.528684 CCCTTCCGACGCTGATTCTC 60.529 60.000 0.00 0.00 0.00 2.87
1070 1080 4.083862 GCTTCCCCTTCCGACGCT 62.084 66.667 0.00 0.00 0.00 5.07
1072 1082 4.814294 CGGCTTCCCCTTCCGACG 62.814 72.222 0.00 0.00 45.53 5.12
1089 1099 4.176752 GGGCCATCCTCGTCCCAC 62.177 72.222 4.39 0.00 38.62 4.61
1121 1131 0.799393 GAACTTCTCCGCCTTCAAGC 59.201 55.000 0.00 0.00 0.00 4.01
1208 1218 4.015406 TGGTCGGTCGCATGCCTT 62.015 61.111 13.15 0.00 0.00 4.35
1241 1251 0.845102 GGGAAGGGGAAGAGGGTTGA 60.845 60.000 0.00 0.00 0.00 3.18
1242 1252 1.691823 GGGAAGGGGAAGAGGGTTG 59.308 63.158 0.00 0.00 0.00 3.77
1243 1253 1.544151 GGGGAAGGGGAAGAGGGTT 60.544 63.158 0.00 0.00 0.00 4.11
1287 1312 4.269363 GGACACCTTAACGATCAAATACGG 59.731 45.833 0.00 0.00 0.00 4.02
1300 1325 5.986501 AACAAACAAACAGGACACCTTAA 57.013 34.783 0.00 0.00 0.00 1.85
1302 1327 4.039852 ACAAACAAACAAACAGGACACCTT 59.960 37.500 0.00 0.00 0.00 3.50
1308 1333 5.175856 CGAACAAACAAACAAACAAACAGGA 59.824 36.000 0.00 0.00 0.00 3.86
1320 1345 1.133407 TCTGCACCCGAACAAACAAAC 59.867 47.619 0.00 0.00 0.00 2.93
1321 1346 1.403679 CTCTGCACCCGAACAAACAAA 59.596 47.619 0.00 0.00 0.00 2.83
1322 1347 1.021202 CTCTGCACCCGAACAAACAA 58.979 50.000 0.00 0.00 0.00 2.83
1323 1348 0.817634 CCTCTGCACCCGAACAAACA 60.818 55.000 0.00 0.00 0.00 2.83
1346 1375 4.704833 GCCACGCCTCCAGCAGAA 62.705 66.667 0.00 0.00 44.04 3.02
1380 1409 2.526873 ACCCCGTGCTCCTTCAGT 60.527 61.111 0.00 0.00 0.00 3.41
1392 1421 4.379243 AGCTTGCACGAGACCCCG 62.379 66.667 0.00 0.00 0.00 5.73
1570 1607 3.305335 CCCTTGCCTTGACAACAATGTAC 60.305 47.826 0.00 0.00 40.74 2.90
1588 1625 0.545548 GGAGTCTGGTCAGGTCCCTT 60.546 60.000 8.30 0.00 0.00 3.95
1672 1709 2.387757 TGCAAAGAAGTTGAAGGGCTT 58.612 42.857 0.00 0.00 39.87 4.35
1682 1719 3.873952 GTCAGACAGAGTTGCAAAGAAGT 59.126 43.478 0.00 0.00 0.00 3.01
1688 1725 2.874086 CACATGTCAGACAGAGTTGCAA 59.126 45.455 9.64 0.00 0.00 4.08
1712 1749 8.751242 TCCATGAATCAGATGAGCAAAAATTAA 58.249 29.630 0.00 0.00 0.00 1.40
1713 1750 8.296211 TCCATGAATCAGATGAGCAAAAATTA 57.704 30.769 0.00 0.00 0.00 1.40
1714 1751 7.177832 TCCATGAATCAGATGAGCAAAAATT 57.822 32.000 0.00 0.00 0.00 1.82
1715 1752 6.183360 CCTCCATGAATCAGATGAGCAAAAAT 60.183 38.462 0.00 0.00 0.00 1.82
1721 1758 3.488778 ACCTCCATGAATCAGATGAGC 57.511 47.619 0.00 0.00 0.00 4.26
1723 1760 6.012113 ACAAAAACCTCCATGAATCAGATGA 58.988 36.000 0.00 0.00 0.00 2.92
1724 1761 6.276832 ACAAAAACCTCCATGAATCAGATG 57.723 37.500 0.00 0.00 0.00 2.90
1727 1764 6.282930 ACAAACAAAAACCTCCATGAATCAG 58.717 36.000 0.00 0.00 0.00 2.90
1728 1765 6.232581 ACAAACAAAAACCTCCATGAATCA 57.767 33.333 0.00 0.00 0.00 2.57
1729 1766 7.552458 AAACAAACAAAAACCTCCATGAATC 57.448 32.000 0.00 0.00 0.00 2.52
1730 1767 8.888716 GTTAAACAAACAAAAACCTCCATGAAT 58.111 29.630 0.00 0.00 38.05 2.57
1731 1768 8.097662 AGTTAAACAAACAAAAACCTCCATGAA 58.902 29.630 0.00 0.00 40.83 2.57
1732 1769 7.616313 AGTTAAACAAACAAAAACCTCCATGA 58.384 30.769 0.00 0.00 40.83 3.07
1733 1770 7.841915 AGTTAAACAAACAAAAACCTCCATG 57.158 32.000 0.00 0.00 40.83 3.66
1743 1780 2.930682 GCCCGCAAGTTAAACAAACAAA 59.069 40.909 0.00 0.00 40.83 2.83
1744 1781 2.541556 GCCCGCAAGTTAAACAAACAA 58.458 42.857 0.00 0.00 40.83 2.83
1745 1782 1.534175 CGCCCGCAAGTTAAACAAACA 60.534 47.619 0.00 0.00 40.83 2.83
1746 1783 1.125270 CGCCCGCAAGTTAAACAAAC 58.875 50.000 0.00 0.00 38.46 2.93
1792 1829 5.733620 ATTAAGACACAAGGACGGTTCTA 57.266 39.130 0.00 0.00 0.00 2.10
1797 1834 4.679654 GCAAAAATTAAGACACAAGGACGG 59.320 41.667 0.00 0.00 0.00 4.79
1807 1844 7.322664 TGAATCAGATGGGCAAAAATTAAGAC 58.677 34.615 0.00 0.00 0.00 3.01
2082 2129 4.013267 ACTGCAAGAGCTGTAGTCAATT 57.987 40.909 0.00 0.00 46.94 2.32
2083 2130 3.692257 ACTGCAAGAGCTGTAGTCAAT 57.308 42.857 0.00 0.00 46.94 2.57
2251 2322 7.792251 AGTCTAGAGAAAGGGGAATAAGCTAAT 59.208 37.037 0.00 0.00 0.00 1.73
2479 3013 5.476599 AGCATATGTGAAAAAGGCAACACTA 59.523 36.000 4.29 0.00 41.41 2.74
2777 3430 7.545546 AGGGTAGACATATTAGGTCCTAACAT 58.454 38.462 13.75 4.95 35.89 2.71
3151 3894 6.592220 ACAAAACACAGGTGATAAAACCAAAC 59.408 34.615 6.40 0.00 43.20 2.93
3166 3909 5.009610 AGGCATACACCTTAACAAAACACAG 59.990 40.000 0.00 0.00 36.28 3.66
3170 3915 6.530181 GCAATAGGCATACACCTTAACAAAAC 59.470 38.462 0.00 0.00 43.97 2.43
3173 3918 5.828299 GCAATAGGCATACACCTTAACAA 57.172 39.130 0.00 0.00 43.97 2.83
3191 3936 6.552445 AACTGATAAGTAGTCTCAGGCAAT 57.448 37.500 12.37 0.00 40.55 3.56
3304 4050 8.178313 GTGCAAATTCCTTACTTCTCATACTTC 58.822 37.037 0.00 0.00 0.00 3.01
3354 4101 1.026718 AGCAGGCATAAGACGCAACC 61.027 55.000 0.00 0.00 0.00 3.77
3410 4157 0.035056 AAGGGTGTGTATGGCTGCTC 60.035 55.000 0.00 0.00 0.00 4.26
3413 4160 1.271871 TGGAAAGGGTGTGTATGGCTG 60.272 52.381 0.00 0.00 0.00 4.85
3636 4391 7.067372 TGCACTGATCTTAGAAATTAACATGGG 59.933 37.037 0.00 0.00 0.00 4.00
3871 4791 5.974300 TCTTTGTCGAATTCTTTTCGTCAG 58.026 37.500 3.52 0.00 39.97 3.51
3876 4796 9.931210 TTCTAGTTTCTTTGTCGAATTCTTTTC 57.069 29.630 3.52 0.00 0.00 2.29
3884 4804 7.490000 ACTTCTCTTCTAGTTTCTTTGTCGAA 58.510 34.615 0.00 0.00 0.00 3.71
3899 4819 1.964223 TGCTTGTCCGACTTCTCTTCT 59.036 47.619 0.00 0.00 0.00 2.85
3900 4820 2.440539 TGCTTGTCCGACTTCTCTTC 57.559 50.000 0.00 0.00 0.00 2.87
4110 5125 5.864474 CACTATATCAGCAACCTCGTTATCC 59.136 44.000 0.00 0.00 0.00 2.59
4158 5359 2.943843 AAGCGTAGAACAACGAAAGC 57.056 45.000 0.00 0.00 45.68 3.51
4233 6051 5.152623 ACTTTCTTCAGTATACAGCAGCA 57.847 39.130 5.50 0.00 0.00 4.41
4234 6052 5.751028 CCTACTTTCTTCAGTATACAGCAGC 59.249 44.000 5.50 0.00 0.00 5.25
4235 6053 6.975772 GTCCTACTTTCTTCAGTATACAGCAG 59.024 42.308 5.50 0.00 0.00 4.24
4265 6083 5.760743 CAGAGCAGATTCACAATCATGAGAT 59.239 40.000 0.09 0.00 40.42 2.75
4316 6359 3.620488 TCTTGTGATCCACCCTTTATGC 58.380 45.455 0.00 0.00 32.73 3.14
4317 6360 6.588719 TTTTCTTGTGATCCACCCTTTATG 57.411 37.500 0.00 0.00 32.73 1.90
4319 6362 6.074648 ACATTTTCTTGTGATCCACCCTTTA 58.925 36.000 0.00 0.00 32.73 1.85
4345 6388 5.050634 GTGATACGTACAGCTTGTTTGTTCA 60.051 40.000 0.00 0.00 0.00 3.18
4396 6439 2.344872 GCACGGTTACTCGGGGTT 59.655 61.111 0.00 0.00 33.58 4.11
4411 6454 1.564139 CGTGCATTCATATCGCGCA 59.436 52.632 8.75 0.00 35.93 6.09
4595 6641 2.610727 GCAGTGTCTGAAGGTAGACCAC 60.611 54.545 0.66 0.00 45.07 4.16
4826 6873 7.446013 TGGAACATTTTTATAACACTCCGAACT 59.554 33.333 0.00 0.00 0.00 3.01
4885 6962 9.900710 TTTTACGTTTTTATGTACATTGAGCAT 57.099 25.926 14.77 0.00 0.00 3.79
4917 6995 8.062065 ACGGTGAACATTATTTCAAATATGGT 57.938 30.769 0.00 0.00 37.24 3.55
4939 7017 8.420374 ACAGTGAACATTTGTCTAATATACGG 57.580 34.615 0.00 0.00 0.00 4.02
5061 7150 3.320673 TCTGCGGGTTGTTTTGTTTTT 57.679 38.095 0.00 0.00 0.00 1.94
5065 7154 3.320673 TTTTTCTGCGGGTTGTTTTGT 57.679 38.095 0.00 0.00 0.00 2.83
5087 7176 2.415893 GCCTATTTGACGCATGCACTTT 60.416 45.455 19.57 0.00 0.00 2.66
5088 7177 1.133025 GCCTATTTGACGCATGCACTT 59.867 47.619 19.57 0.00 0.00 3.16
5089 7178 0.734889 GCCTATTTGACGCATGCACT 59.265 50.000 19.57 0.66 0.00 4.40
5115 7204 1.669115 GCTGAAGTGCGAGGCAAGA 60.669 57.895 0.00 0.00 41.47 3.02
5116 7205 1.509644 TTGCTGAAGTGCGAGGCAAG 61.510 55.000 0.00 0.00 41.47 4.01
5117 7206 1.100463 TTTGCTGAAGTGCGAGGCAA 61.100 50.000 0.00 0.00 41.47 4.52
5118 7207 1.509644 CTTTGCTGAAGTGCGAGGCA 61.510 55.000 0.00 0.00 35.60 4.75
5119 7208 1.208614 CTTTGCTGAAGTGCGAGGC 59.791 57.895 0.00 0.00 35.36 4.70
5120 7209 0.514691 GTCTTTGCTGAAGTGCGAGG 59.485 55.000 0.00 0.00 36.70 4.63
5121 7210 0.162507 CGTCTTTGCTGAAGTGCGAG 59.837 55.000 0.00 0.00 37.17 5.03
5122 7211 1.831389 GCGTCTTTGCTGAAGTGCGA 61.831 55.000 16.48 0.00 37.17 5.10
5123 7212 1.439365 GCGTCTTTGCTGAAGTGCG 60.439 57.895 11.81 11.81 37.63 5.34
5124 7213 1.439365 CGCGTCTTTGCTGAAGTGC 60.439 57.895 0.00 5.70 36.70 4.40
5125 7214 0.111089 GACGCGTCTTTGCTGAAGTG 60.111 55.000 31.12 0.00 36.70 3.16
5126 7215 0.529773 TGACGCGTCTTTGCTGAAGT 60.530 50.000 36.27 0.00 36.70 3.01
5127 7216 0.162507 CTGACGCGTCTTTGCTGAAG 59.837 55.000 36.27 20.60 36.67 3.02
5128 7217 0.249280 TCTGACGCGTCTTTGCTGAA 60.249 50.000 36.27 15.40 0.00 3.02
5129 7218 0.939577 GTCTGACGCGTCTTTGCTGA 60.940 55.000 36.27 21.34 0.00 4.26
5130 7219 1.488957 GTCTGACGCGTCTTTGCTG 59.511 57.895 36.27 19.70 0.00 4.41
5131 7220 1.664965 GGTCTGACGCGTCTTTGCT 60.665 57.895 36.27 0.90 0.00 3.91
5132 7221 1.954146 TGGTCTGACGCGTCTTTGC 60.954 57.895 36.27 23.21 0.00 3.68
5133 7222 1.853319 GTGGTCTGACGCGTCTTTG 59.147 57.895 36.27 25.64 0.00 2.77
5134 7223 1.660575 CGTGGTCTGACGCGTCTTT 60.661 57.895 36.27 3.15 39.35 2.52
5135 7224 2.050351 CGTGGTCTGACGCGTCTT 60.050 61.111 36.27 3.60 39.35 3.01
5136 7225 4.039357 CCGTGGTCTGACGCGTCT 62.039 66.667 36.27 4.51 42.37 4.18
5150 7239 3.674050 ATAGGAGACCACGCCCCGT 62.674 63.158 0.00 0.00 42.36 5.28
5151 7240 1.968050 AAATAGGAGACCACGCCCCG 61.968 60.000 0.00 0.00 36.64 5.73
5152 7241 1.070289 CTAAATAGGAGACCACGCCCC 59.930 57.143 0.00 0.00 36.64 5.80
5153 7242 1.540580 GCTAAATAGGAGACCACGCCC 60.541 57.143 0.00 0.00 36.64 6.13
5154 7243 1.867166 GCTAAATAGGAGACCACGCC 58.133 55.000 0.00 0.00 36.22 5.68
5155 7244 1.488527 CGCTAAATAGGAGACCACGC 58.511 55.000 0.00 0.00 0.00 5.34
5156 7245 1.488527 GCGCTAAATAGGAGACCACG 58.511 55.000 0.00 0.00 0.00 4.94
5157 7246 1.202382 ACGCGCTAAATAGGAGACCAC 60.202 52.381 5.73 0.00 0.00 4.16
5158 7247 1.108776 ACGCGCTAAATAGGAGACCA 58.891 50.000 5.73 0.00 0.00 4.02
5159 7248 2.351544 CCTACGCGCTAAATAGGAGACC 60.352 54.545 13.03 0.00 38.20 3.85
5160 7249 2.292845 ACCTACGCGCTAAATAGGAGAC 59.707 50.000 22.35 0.00 38.20 3.36
5161 7250 2.551459 GACCTACGCGCTAAATAGGAGA 59.449 50.000 22.35 0.00 38.20 3.71
5162 7251 2.351544 GGACCTACGCGCTAAATAGGAG 60.352 54.545 22.35 6.89 38.20 3.69
5163 7252 1.610522 GGACCTACGCGCTAAATAGGA 59.389 52.381 22.35 0.00 38.20 2.94
5164 7253 1.336609 GGGACCTACGCGCTAAATAGG 60.337 57.143 15.90 15.90 41.21 2.57
5165 7254 1.665161 CGGGACCTACGCGCTAAATAG 60.665 57.143 5.73 0.00 46.65 1.73
5166 7255 0.311790 CGGGACCTACGCGCTAAATA 59.688 55.000 5.73 0.00 46.65 1.40
5167 7256 1.066918 CGGGACCTACGCGCTAAAT 59.933 57.895 5.73 0.00 46.65 1.40
5168 7257 2.491152 CGGGACCTACGCGCTAAA 59.509 61.111 5.73 0.00 46.65 1.85
5174 7263 1.517913 GCTAACACGGGACCTACGC 60.518 63.158 0.00 0.00 34.00 4.42
5175 7264 1.140375 GGCTAACACGGGACCTACG 59.860 63.158 0.00 0.00 37.36 3.51
5176 7265 0.108472 GTGGCTAACACGGGACCTAC 60.108 60.000 0.00 0.00 40.85 3.18
5177 7266 2.279842 GTGGCTAACACGGGACCTA 58.720 57.895 0.00 0.00 40.85 3.08
5178 7267 3.066198 GTGGCTAACACGGGACCT 58.934 61.111 0.00 0.00 40.85 3.85
5186 7275 2.548493 GGTACTCGTTTGGTGGCTAACA 60.548 50.000 0.00 0.00 0.00 2.41
5187 7276 2.071540 GGTACTCGTTTGGTGGCTAAC 58.928 52.381 0.00 0.00 0.00 2.34
5188 7277 1.002315 GGGTACTCGTTTGGTGGCTAA 59.998 52.381 0.00 0.00 0.00 3.09
5189 7278 0.609662 GGGTACTCGTTTGGTGGCTA 59.390 55.000 0.00 0.00 0.00 3.93
5190 7279 1.125711 AGGGTACTCGTTTGGTGGCT 61.126 55.000 0.00 0.00 0.00 4.75
5191 7280 0.672711 GAGGGTACTCGTTTGGTGGC 60.673 60.000 0.00 0.00 33.35 5.01
5192 7281 0.036671 GGAGGGTACTCGTTTGGTGG 60.037 60.000 0.00 0.00 44.93 4.61
5193 7282 0.036671 GGGAGGGTACTCGTTTGGTG 60.037 60.000 0.00 0.00 44.93 4.17
5194 7283 1.538687 CGGGAGGGTACTCGTTTGGT 61.539 60.000 0.00 0.00 44.93 3.67
5195 7284 1.217244 CGGGAGGGTACTCGTTTGG 59.783 63.158 0.00 0.00 44.93 3.28
5196 7285 1.447314 GCGGGAGGGTACTCGTTTG 60.447 63.158 0.00 0.00 44.93 2.93
5197 7286 2.653087 GGCGGGAGGGTACTCGTTT 61.653 63.158 0.00 0.00 44.93 3.60
5198 7287 3.073101 GGCGGGAGGGTACTCGTT 61.073 66.667 0.00 0.00 44.93 3.85
5200 7289 4.835891 AGGGCGGGAGGGTACTCG 62.836 72.222 0.00 0.00 44.93 4.18
5201 7290 2.365237 AAGGGCGGGAGGGTACTC 60.365 66.667 0.00 0.00 43.20 2.59
5202 7291 2.365237 GAAGGGCGGGAGGGTACT 60.365 66.667 0.00 0.00 0.00 2.73
5203 7292 2.594365 TAGGAAGGGCGGGAGGGTAC 62.594 65.000 0.00 0.00 0.00 3.34
5204 7293 2.308118 CTAGGAAGGGCGGGAGGGTA 62.308 65.000 0.00 0.00 0.00 3.69
5205 7294 3.691326 TAGGAAGGGCGGGAGGGT 61.691 66.667 0.00 0.00 0.00 4.34
5206 7295 2.844839 CTAGGAAGGGCGGGAGGG 60.845 72.222 0.00 0.00 0.00 4.30
5207 7296 3.551407 GCTAGGAAGGGCGGGAGG 61.551 72.222 0.00 0.00 0.00 4.30
5208 7297 3.917760 CGCTAGGAAGGGCGGGAG 61.918 72.222 0.00 0.00 46.42 4.30
5213 7302 0.535797 AAGTGTACGCTAGGAAGGGC 59.464 55.000 9.84 0.00 39.22 5.19
5214 7303 1.822990 TCAAGTGTACGCTAGGAAGGG 59.177 52.381 9.84 0.00 41.33 3.95
5215 7304 2.735762 GCTCAAGTGTACGCTAGGAAGG 60.736 54.545 9.84 1.82 0.00 3.46
5216 7305 2.531206 GCTCAAGTGTACGCTAGGAAG 58.469 52.381 9.84 6.20 0.00 3.46
5217 7306 1.203994 GGCTCAAGTGTACGCTAGGAA 59.796 52.381 9.84 0.00 0.00 3.36
5218 7307 0.815734 GGCTCAAGTGTACGCTAGGA 59.184 55.000 9.84 9.66 0.00 2.94
5219 7308 0.530744 TGGCTCAAGTGTACGCTAGG 59.469 55.000 9.84 5.55 0.00 3.02
5220 7309 1.202582 ACTGGCTCAAGTGTACGCTAG 59.797 52.381 9.84 5.60 37.07 3.42
5221 7310 1.201647 GACTGGCTCAAGTGTACGCTA 59.798 52.381 9.84 0.00 0.00 4.26
5222 7311 0.038159 GACTGGCTCAAGTGTACGCT 60.038 55.000 2.24 2.24 0.00 5.07
5223 7312 1.014564 GGACTGGCTCAAGTGTACGC 61.015 60.000 0.00 0.00 0.00 4.42
5224 7313 0.317160 TGGACTGGCTCAAGTGTACG 59.683 55.000 0.00 0.00 0.00 3.67
5225 7314 2.037251 TCTTGGACTGGCTCAAGTGTAC 59.963 50.000 10.29 0.00 40.67 2.90
5226 7315 2.325484 TCTTGGACTGGCTCAAGTGTA 58.675 47.619 10.29 0.00 40.67 2.90
5227 7316 1.131638 TCTTGGACTGGCTCAAGTGT 58.868 50.000 10.29 0.00 40.67 3.55
5228 7317 2.149578 CTTCTTGGACTGGCTCAAGTG 58.850 52.381 10.29 3.73 40.67 3.16
5229 7318 1.771255 ACTTCTTGGACTGGCTCAAGT 59.229 47.619 10.29 0.00 40.67 3.16
5230 7319 2.557920 ACTTCTTGGACTGGCTCAAG 57.442 50.000 5.64 5.64 41.06 3.02
5231 7320 3.117888 AGAAACTTCTTGGACTGGCTCAA 60.118 43.478 0.00 0.00 32.55 3.02
5232 7321 2.439507 AGAAACTTCTTGGACTGGCTCA 59.560 45.455 0.00 0.00 32.55 4.26
5233 7322 3.133141 AGAAACTTCTTGGACTGGCTC 57.867 47.619 0.00 0.00 32.55 4.70
5234 7323 3.584733 AAGAAACTTCTTGGACTGGCT 57.415 42.857 3.91 0.00 45.27 4.75
5235 7324 4.611943 GAAAAGAAACTTCTTGGACTGGC 58.388 43.478 5.49 0.00 46.22 4.85
5236 7325 4.261197 CCGAAAAGAAACTTCTTGGACTGG 60.261 45.833 5.49 1.44 46.22 4.00
5237 7326 4.335594 ACCGAAAAGAAACTTCTTGGACTG 59.664 41.667 11.88 4.72 46.22 3.51
5238 7327 4.524053 ACCGAAAAGAAACTTCTTGGACT 58.476 39.130 11.88 0.00 46.22 3.85
5239 7328 4.895224 ACCGAAAAGAAACTTCTTGGAC 57.105 40.909 11.88 4.65 46.22 4.02
5240 7329 5.907866 AAACCGAAAAGAAACTTCTTGGA 57.092 34.783 11.88 0.00 46.22 3.53
5241 7330 5.290885 CCAAAACCGAAAAGAAACTTCTTGG 59.709 40.000 5.49 5.67 46.22 3.61
5242 7331 5.290885 CCCAAAACCGAAAAGAAACTTCTTG 59.709 40.000 5.49 0.00 46.22 3.02
5244 7333 4.707934 TCCCAAAACCGAAAAGAAACTTCT 59.292 37.500 0.00 0.00 39.74 2.85
5245 7334 5.001237 TCCCAAAACCGAAAAGAAACTTC 57.999 39.130 0.00 0.00 0.00 3.01
5246 7335 5.356426 CATCCCAAAACCGAAAAGAAACTT 58.644 37.500 0.00 0.00 0.00 2.66
5247 7336 4.202212 CCATCCCAAAACCGAAAAGAAACT 60.202 41.667 0.00 0.00 0.00 2.66
5248 7337 4.055360 CCATCCCAAAACCGAAAAGAAAC 58.945 43.478 0.00 0.00 0.00 2.78
5249 7338 3.707102 ACCATCCCAAAACCGAAAAGAAA 59.293 39.130 0.00 0.00 0.00 2.52
5250 7339 3.068873 CACCATCCCAAAACCGAAAAGAA 59.931 43.478 0.00 0.00 0.00 2.52
5251 7340 2.625790 CACCATCCCAAAACCGAAAAGA 59.374 45.455 0.00 0.00 0.00 2.52
5252 7341 2.364002 ACACCATCCCAAAACCGAAAAG 59.636 45.455 0.00 0.00 0.00 2.27
5253 7342 2.389715 ACACCATCCCAAAACCGAAAA 58.610 42.857 0.00 0.00 0.00 2.29
5254 7343 2.074729 ACACCATCCCAAAACCGAAA 57.925 45.000 0.00 0.00 0.00 3.46
5255 7344 2.074729 AACACCATCCCAAAACCGAA 57.925 45.000 0.00 0.00 0.00 4.30
5256 7345 2.372504 TCTAACACCATCCCAAAACCGA 59.627 45.455 0.00 0.00 0.00 4.69
5257 7346 2.747446 CTCTAACACCATCCCAAAACCG 59.253 50.000 0.00 0.00 0.00 4.44
5258 7347 3.756963 GTCTCTAACACCATCCCAAAACC 59.243 47.826 0.00 0.00 0.00 3.27
5259 7348 3.756963 GGTCTCTAACACCATCCCAAAAC 59.243 47.826 0.00 0.00 33.63 2.43
5260 7349 3.655777 AGGTCTCTAACACCATCCCAAAA 59.344 43.478 0.00 0.00 36.23 2.44
5261 7350 3.256704 AGGTCTCTAACACCATCCCAAA 58.743 45.455 0.00 0.00 36.23 3.28
5262 7351 2.915869 AGGTCTCTAACACCATCCCAA 58.084 47.619 0.00 0.00 36.23 4.12
5263 7352 2.642171 AGGTCTCTAACACCATCCCA 57.358 50.000 0.00 0.00 36.23 4.37
5264 7353 4.302559 AAAAGGTCTCTAACACCATCCC 57.697 45.455 0.00 0.00 36.23 3.85
5283 7372 5.576447 AGAGGCGAAAGAAAACAGAAAAA 57.424 34.783 0.00 0.00 0.00 1.94
5284 7373 5.576447 AAGAGGCGAAAGAAAACAGAAAA 57.424 34.783 0.00 0.00 0.00 2.29
5285 7374 5.576447 AAAGAGGCGAAAGAAAACAGAAA 57.424 34.783 0.00 0.00 0.00 2.52
5286 7375 5.357032 AGAAAAGAGGCGAAAGAAAACAGAA 59.643 36.000 0.00 0.00 0.00 3.02
5287 7376 4.881850 AGAAAAGAGGCGAAAGAAAACAGA 59.118 37.500 0.00 0.00 0.00 3.41
5288 7377 4.972440 CAGAAAAGAGGCGAAAGAAAACAG 59.028 41.667 0.00 0.00 0.00 3.16
5289 7378 4.733523 GCAGAAAAGAGGCGAAAGAAAACA 60.734 41.667 0.00 0.00 0.00 2.83
5290 7379 3.731216 GCAGAAAAGAGGCGAAAGAAAAC 59.269 43.478 0.00 0.00 0.00 2.43
5291 7380 3.243401 GGCAGAAAAGAGGCGAAAGAAAA 60.243 43.478 0.00 0.00 0.00 2.29
5292 7381 2.293399 GGCAGAAAAGAGGCGAAAGAAA 59.707 45.455 0.00 0.00 0.00 2.52
5293 7382 1.880027 GGCAGAAAAGAGGCGAAAGAA 59.120 47.619 0.00 0.00 0.00 2.52
5294 7383 1.072331 AGGCAGAAAAGAGGCGAAAGA 59.928 47.619 0.00 0.00 35.18 2.52
5295 7384 1.528129 AGGCAGAAAAGAGGCGAAAG 58.472 50.000 0.00 0.00 35.18 2.62
5296 7385 1.981256 AAGGCAGAAAAGAGGCGAAA 58.019 45.000 0.00 0.00 35.18 3.46
5297 7386 1.981256 AAAGGCAGAAAAGAGGCGAA 58.019 45.000 0.00 0.00 35.18 4.70
5298 7387 1.981256 AAAAGGCAGAAAAGAGGCGA 58.019 45.000 0.00 0.00 35.18 5.54
5299 7388 2.034558 TGAAAAAGGCAGAAAAGAGGCG 59.965 45.455 0.00 0.00 35.18 5.52
5300 7389 3.733443 TGAAAAAGGCAGAAAAGAGGC 57.267 42.857 0.00 0.00 0.00 4.70
5301 7390 5.718724 AGATGAAAAAGGCAGAAAAGAGG 57.281 39.130 0.00 0.00 0.00 3.69
5302 7391 5.855395 CGAAGATGAAAAAGGCAGAAAAGAG 59.145 40.000 0.00 0.00 0.00 2.85
5303 7392 5.530915 TCGAAGATGAAAAAGGCAGAAAAGA 59.469 36.000 0.00 0.00 0.00 2.52
5304 7393 5.762045 TCGAAGATGAAAAAGGCAGAAAAG 58.238 37.500 0.00 0.00 0.00 2.27
5305 7394 5.766150 TCGAAGATGAAAAAGGCAGAAAA 57.234 34.783 0.00 0.00 0.00 2.29
5306 7395 5.964958 ATCGAAGATGAAAAAGGCAGAAA 57.035 34.783 0.00 0.00 45.12 2.52
5307 7396 5.964958 AATCGAAGATGAAAAAGGCAGAA 57.035 34.783 0.00 0.00 45.12 3.02
5308 7397 5.707298 AGAAATCGAAGATGAAAAAGGCAGA 59.293 36.000 0.00 0.00 45.12 4.26
5309 7398 5.947443 AGAAATCGAAGATGAAAAAGGCAG 58.053 37.500 0.00 0.00 45.12 4.85
5310 7399 5.106157 GGAGAAATCGAAGATGAAAAAGGCA 60.106 40.000 0.00 0.00 45.12 4.75
5311 7400 5.124617 AGGAGAAATCGAAGATGAAAAAGGC 59.875 40.000 0.00 0.00 45.12 4.35
5312 7401 6.749923 AGGAGAAATCGAAGATGAAAAAGG 57.250 37.500 0.00 0.00 45.12 3.11
5313 7402 9.468532 AAAAAGGAGAAATCGAAGATGAAAAAG 57.531 29.630 0.00 0.00 45.12 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.