Multiple sequence alignment - TraesCS4B01G307900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G307900 chr4B 100.000 5405 0 0 1 5405 598259685 598265089 0.000000e+00 9982
1 TraesCS4B01G307900 chr4B 93.438 320 20 1 5082 5401 418522118 418522436 1.760000e-129 473
2 TraesCS4B01G307900 chr4D 93.163 4900 190 70 2 4831 474555994 474560818 0.000000e+00 7059
3 TraesCS4B01G307900 chr4A 89.823 3606 184 80 170 3664 681705701 681702168 0.000000e+00 4457
4 TraesCS4B01G307900 chr4A 88.306 1086 80 25 3726 4785 681702159 681701095 0.000000e+00 1258
5 TraesCS4B01G307900 chr4A 94.921 315 15 1 5089 5403 698935735 698936048 4.860000e-135 492
6 TraesCS4B01G307900 chr4A 89.362 235 15 8 3492 3721 681689074 681688845 2.460000e-73 287
7 TraesCS4B01G307900 chr5B 96.440 309 10 1 5095 5403 270326324 270326017 4.830000e-140 508
8 TraesCS4B01G307900 chr5B 95.710 303 12 1 5093 5395 454909570 454909871 2.260000e-133 486
9 TraesCS4B01G307900 chr5B 85.306 245 27 8 4826 5068 543221195 543221432 1.500000e-60 244
10 TraesCS4B01G307900 chr3B 95.527 313 14 0 5091 5403 562782125 562781813 8.080000e-138 501
11 TraesCS4B01G307900 chr3B 95.146 309 15 0 5095 5403 158206283 158206591 6.290000e-134 488
12 TraesCS4B01G307900 chr2B 95.793 309 13 0 5095 5403 48288886 48289194 2.910000e-137 499
13 TraesCS4B01G307900 chr2B 90.948 232 17 3 4837 5068 424115043 424114816 5.260000e-80 309
14 TraesCS4B01G307900 chr2B 86.864 236 26 4 4833 5068 559951687 559951917 5.370000e-65 259
15 TraesCS4B01G307900 chr2B 85.776 232 28 3 4837 5068 423908373 423908147 1.950000e-59 241
16 TraesCS4B01G307900 chr7B 95.765 307 13 0 5092 5398 510629993 510630299 3.760000e-136 496
17 TraesCS4B01G307900 chr7B 91.342 231 16 3 4838 5068 504718559 504718785 4.060000e-81 313
18 TraesCS4B01G307900 chr7B 85.043 234 33 2 4835 5068 721082590 721082821 2.520000e-58 237
19 TraesCS4B01G307900 chr1B 95.484 310 14 0 5096 5405 61433410 61433101 3.760000e-136 496
20 TraesCS4B01G307900 chr6B 92.174 230 13 5 4837 5066 475860688 475860464 2.430000e-83 320
21 TraesCS4B01G307900 chr3D 88.584 219 23 2 4850 5068 376174338 376174122 1.150000e-66 265
22 TraesCS4B01G307900 chr6D 85.827 254 23 8 4835 5087 13966498 13966739 1.930000e-64 257
23 TraesCS4B01G307900 chr5A 86.522 230 26 4 4837 5066 6147345 6147569 1.160000e-61 248
24 TraesCS4B01G307900 chr2D 85.776 232 25 8 4837 5068 105501557 105501780 7.000000e-59 239


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G307900 chr4B 598259685 598265089 5404 False 9982.0 9982 100.0000 1 5405 1 chr4B.!!$F2 5404
1 TraesCS4B01G307900 chr4D 474555994 474560818 4824 False 7059.0 7059 93.1630 2 4831 1 chr4D.!!$F1 4829
2 TraesCS4B01G307900 chr4A 681701095 681705701 4606 True 2857.5 4457 89.0645 170 4785 2 chr4A.!!$R2 4615

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
128 129 0.036164 TAATGCTGGCACGGTGAGTT 59.964 50.0 13.29 0.0 36.83 3.01 F
134 135 0.107410 TGGCACGGTGAGTTCTTTGT 60.107 50.0 13.29 0.0 0.00 2.83 F
655 716 0.108756 CCCCTTTTCGTCTCGTCCTC 60.109 60.0 0.00 0.0 0.00 3.71 F
656 717 0.108756 CCCTTTTCGTCTCGTCCTCC 60.109 60.0 0.00 0.0 0.00 4.30 F
852 939 0.318107 TGCTTTGCTCGCTTGCTTTC 60.318 50.0 0.00 0.0 0.00 2.62 F
2744 2899 0.109532 TGTTGATGGTGCGGAAGGAA 59.890 50.0 0.00 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1730 1885 0.042581 TCATGTGGCCTCCCTCTGTA 59.957 55.0 3.32 0.0 0.00 2.74 R
1733 1888 0.252881 TCTTCATGTGGCCTCCCTCT 60.253 55.0 3.32 0.0 0.00 3.69 R
2174 2329 0.664761 TGTTGAAACTGCTCTGCTGC 59.335 50.0 0.00 0.0 0.00 5.25 R
2383 2538 0.902984 TTCCAAGCTCCGAGCCACTA 60.903 55.0 16.99 0.0 43.77 2.74 R
2847 3005 0.323629 CTTCGGGGTTGTGGCTTCTA 59.676 55.0 0.00 0.0 0.00 2.10 R
4505 4698 0.034574 ACACACACACAAGGAGCCAA 60.035 50.0 0.00 0.0 0.00 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.122711 GGCAGAAAATCAAAACCATGATTGG 59.877 40.000 3.52 0.00 46.57 3.16
43 44 5.392995 TCAAAACCATGATTGGAAGAAGGA 58.607 37.500 0.00 0.00 46.92 3.36
117 118 7.712264 TTTCTGAATTGTTTTGTAATGCTGG 57.288 32.000 0.00 0.00 0.00 4.85
127 128 0.673644 GTAATGCTGGCACGGTGAGT 60.674 55.000 13.29 0.00 36.83 3.41
128 129 0.036164 TAATGCTGGCACGGTGAGTT 59.964 50.000 13.29 0.00 36.83 3.01
129 130 1.237285 AATGCTGGCACGGTGAGTTC 61.237 55.000 13.29 0.00 36.83 3.01
130 131 2.031163 GCTGGCACGGTGAGTTCT 59.969 61.111 13.29 0.00 36.83 3.01
131 132 1.598130 GCTGGCACGGTGAGTTCTT 60.598 57.895 13.29 0.00 36.83 2.52
132 133 1.166531 GCTGGCACGGTGAGTTCTTT 61.167 55.000 13.29 0.00 36.83 2.52
133 134 0.588252 CTGGCACGGTGAGTTCTTTG 59.412 55.000 13.29 0.00 0.00 2.77
134 135 0.107410 TGGCACGGTGAGTTCTTTGT 60.107 50.000 13.29 0.00 0.00 2.83
135 136 0.307760 GGCACGGTGAGTTCTTTGTG 59.692 55.000 13.29 0.00 0.00 3.33
136 137 1.014352 GCACGGTGAGTTCTTTGTGT 58.986 50.000 13.29 0.00 0.00 3.72
137 138 1.268032 GCACGGTGAGTTCTTTGTGTG 60.268 52.381 13.29 0.00 0.00 3.82
138 139 2.006888 CACGGTGAGTTCTTTGTGTGT 58.993 47.619 0.74 0.00 0.00 3.72
139 140 2.006888 ACGGTGAGTTCTTTGTGTGTG 58.993 47.619 0.00 0.00 0.00 3.82
140 141 2.006888 CGGTGAGTTCTTTGTGTGTGT 58.993 47.619 0.00 0.00 0.00 3.72
141 142 2.223021 CGGTGAGTTCTTTGTGTGTGTG 60.223 50.000 0.00 0.00 0.00 3.82
142 143 2.747446 GGTGAGTTCTTTGTGTGTGTGT 59.253 45.455 0.00 0.00 0.00 3.72
143 144 3.426159 GGTGAGTTCTTTGTGTGTGTGTG 60.426 47.826 0.00 0.00 0.00 3.82
144 145 3.188460 GTGAGTTCTTTGTGTGTGTGTGT 59.812 43.478 0.00 0.00 0.00 3.72
145 146 3.188254 TGAGTTCTTTGTGTGTGTGTGTG 59.812 43.478 0.00 0.00 0.00 3.82
146 147 3.146066 AGTTCTTTGTGTGTGTGTGTGT 58.854 40.909 0.00 0.00 0.00 3.72
147 148 3.058293 AGTTCTTTGTGTGTGTGTGTGTG 60.058 43.478 0.00 0.00 0.00 3.82
148 149 2.499197 TCTTTGTGTGTGTGTGTGTGT 58.501 42.857 0.00 0.00 0.00 3.72
149 150 2.225255 TCTTTGTGTGTGTGTGTGTGTG 59.775 45.455 0.00 0.00 0.00 3.82
150 151 1.598882 TTGTGTGTGTGTGTGTGTGT 58.401 45.000 0.00 0.00 0.00 3.72
151 152 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
152 153 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
153 154 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
154 155 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
155 156 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
156 157 1.152510 GTGTGTGTGTGTGTGTGTGA 58.847 50.000 0.00 0.00 0.00 3.58
157 158 1.737236 GTGTGTGTGTGTGTGTGTGAT 59.263 47.619 0.00 0.00 0.00 3.06
158 159 1.736681 TGTGTGTGTGTGTGTGTGATG 59.263 47.619 0.00 0.00 0.00 3.07
159 160 1.063912 GTGTGTGTGTGTGTGTGATGG 59.936 52.381 0.00 0.00 0.00 3.51
160 161 1.065854 TGTGTGTGTGTGTGTGATGGA 60.066 47.619 0.00 0.00 0.00 3.41
161 162 1.599071 GTGTGTGTGTGTGTGATGGAG 59.401 52.381 0.00 0.00 0.00 3.86
162 163 0.588252 GTGTGTGTGTGTGATGGAGC 59.412 55.000 0.00 0.00 0.00 4.70
163 164 0.179936 TGTGTGTGTGTGATGGAGCA 59.820 50.000 0.00 0.00 0.00 4.26
164 165 0.870393 GTGTGTGTGTGATGGAGCAG 59.130 55.000 0.00 0.00 0.00 4.24
165 166 0.886043 TGTGTGTGTGATGGAGCAGC 60.886 55.000 0.00 0.00 0.00 5.25
166 167 1.302752 TGTGTGTGATGGAGCAGCC 60.303 57.895 0.00 0.00 37.10 4.85
275 289 3.151022 CCTCGCTGTCTCCCCTCC 61.151 72.222 0.00 0.00 0.00 4.30
616 653 3.645268 GATTGGCGCCAAGGAGGGT 62.645 63.158 41.38 27.12 39.47 4.34
653 714 1.079336 CCCCCTTTTCGTCTCGTCC 60.079 63.158 0.00 0.00 0.00 4.79
654 715 1.542187 CCCCCTTTTCGTCTCGTCCT 61.542 60.000 0.00 0.00 0.00 3.85
655 716 0.108756 CCCCTTTTCGTCTCGTCCTC 60.109 60.000 0.00 0.00 0.00 3.71
656 717 0.108756 CCCTTTTCGTCTCGTCCTCC 60.109 60.000 0.00 0.00 0.00 4.30
657 718 0.889306 CCTTTTCGTCTCGTCCTCCT 59.111 55.000 0.00 0.00 0.00 3.69
774 852 6.427441 GTTCAAATTATCTTCTCCTTCCCCT 58.573 40.000 0.00 0.00 0.00 4.79
819 906 3.374042 TTAATCCGCCCAAAATCTCCA 57.626 42.857 0.00 0.00 0.00 3.86
820 907 2.459555 AATCCGCCCAAAATCTCCAT 57.540 45.000 0.00 0.00 0.00 3.41
821 908 2.459555 ATCCGCCCAAAATCTCCATT 57.540 45.000 0.00 0.00 0.00 3.16
822 909 2.230130 TCCGCCCAAAATCTCCATTT 57.770 45.000 0.00 0.00 33.27 2.32
824 911 2.903135 TCCGCCCAAAATCTCCATTTTT 59.097 40.909 0.00 0.00 39.75 1.94
825 912 3.056179 TCCGCCCAAAATCTCCATTTTTC 60.056 43.478 0.00 0.00 39.75 2.29
826 913 3.261580 CGCCCAAAATCTCCATTTTTCC 58.738 45.455 0.00 0.00 39.75 3.13
827 914 3.261580 GCCCAAAATCTCCATTTTTCCG 58.738 45.455 0.00 0.00 39.75 4.30
828 915 3.860641 CCCAAAATCTCCATTTTTCCGG 58.139 45.455 0.00 0.00 39.75 5.14
829 916 3.261580 CCAAAATCTCCATTTTTCCGGC 58.738 45.455 0.00 0.00 39.75 6.13
830 917 3.261580 CAAAATCTCCATTTTTCCGGCC 58.738 45.455 0.00 0.00 39.75 6.13
831 918 2.532250 AATCTCCATTTTTCCGGCCT 57.468 45.000 0.00 0.00 0.00 5.19
832 919 2.058593 ATCTCCATTTTTCCGGCCTC 57.941 50.000 0.00 0.00 0.00 4.70
833 920 0.991920 TCTCCATTTTTCCGGCCTCT 59.008 50.000 0.00 0.00 0.00 3.69
834 921 1.098050 CTCCATTTTTCCGGCCTCTG 58.902 55.000 0.00 0.00 0.00 3.35
835 922 0.965363 TCCATTTTTCCGGCCTCTGC 60.965 55.000 0.00 0.00 0.00 4.26
852 939 0.318107 TGCTTTGCTCGCTTGCTTTC 60.318 50.000 0.00 0.00 0.00 2.62
853 940 0.318107 GCTTTGCTCGCTTGCTTTCA 60.318 50.000 0.00 0.00 0.00 2.69
859 946 3.456280 TGCTCGCTTGCTTTCAATTTTT 58.544 36.364 0.00 0.00 0.00 1.94
905 1012 4.932200 CCGACTTATTTTCACTTCTGCTCT 59.068 41.667 0.00 0.00 0.00 4.09
906 1019 5.163913 CCGACTTATTTTCACTTCTGCTCTG 60.164 44.000 0.00 0.00 0.00 3.35
938 1051 1.369091 GCACACTGGCCGTAATCTGG 61.369 60.000 0.00 0.00 0.00 3.86
944 1058 0.616395 TGGCCGTAATCTGGTGGAGA 60.616 55.000 0.00 0.00 34.25 3.71
950 1064 3.372954 CGTAATCTGGTGGAGACGATTC 58.627 50.000 0.00 0.00 38.63 2.52
1095 1221 4.615912 CGACCCAACTGACCATGATTTTTC 60.616 45.833 0.00 0.00 0.00 2.29
1100 1226 3.081804 ACTGACCATGATTTTTCCGGAC 58.918 45.455 1.83 0.00 0.00 4.79
1121 1247 3.758554 ACACATGATTGGTTAACTCTGCC 59.241 43.478 5.42 0.00 0.00 4.85
1132 1258 5.538053 TGGTTAACTCTGCCATGATTTTTCA 59.462 36.000 5.42 0.00 0.00 2.69
1151 1288 1.488393 CATGGGGAAGAGAAGACCTCC 59.512 57.143 0.00 0.00 42.97 4.30
1295 1445 9.807386 GACGGTAAGCACATATATTTTTCATAC 57.193 33.333 0.00 0.00 0.00 2.39
1300 1450 7.822161 AGCACATATATTTTTCATACTGGCA 57.178 32.000 0.00 0.00 0.00 4.92
1301 1451 8.236585 AGCACATATATTTTTCATACTGGCAA 57.763 30.769 0.00 0.00 0.00 4.52
1302 1452 8.137437 AGCACATATATTTTTCATACTGGCAAC 58.863 33.333 0.00 0.00 0.00 4.17
1303 1453 7.382218 GCACATATATTTTTCATACTGGCAACC 59.618 37.037 0.00 0.00 0.00 3.77
1305 1455 7.284489 ACATATATTTTTCATACTGGCAACCGT 59.716 33.333 0.00 0.00 0.00 4.83
1308 1458 1.518325 TTCATACTGGCAACCGTGTG 58.482 50.000 0.00 0.00 0.00 3.82
1317 1467 0.988439 GCAACCGTGTGTTTGTGTTG 59.012 50.000 0.00 0.00 39.35 3.33
1324 1474 2.769376 GTGTGTTTGTGTTGAGTGTCG 58.231 47.619 0.00 0.00 0.00 4.35
1341 1492 1.996191 GTCGACTGTCAAATCTCAGCC 59.004 52.381 8.70 0.00 35.37 4.85
1361 1512 5.587844 CAGCCTTTTACAGTCTGCTTATCAT 59.412 40.000 0.00 0.00 0.00 2.45
1486 1641 0.698818 AGGAGGGGGACACAAATCAC 59.301 55.000 0.00 0.00 0.00 3.06
1718 1873 1.985473 AAGGTGTGAGCATTTGAGCA 58.015 45.000 0.00 0.00 36.85 4.26
1730 1885 4.157289 AGCATTTGAGCAACGATTCTTCAT 59.843 37.500 0.00 0.00 36.85 2.57
1733 1888 6.545508 CATTTGAGCAACGATTCTTCATACA 58.454 36.000 0.00 0.00 0.00 2.29
1754 1909 1.213926 GAGGGAGGCCACATGAAGATT 59.786 52.381 5.01 0.00 0.00 2.40
1912 2067 4.714632 TCAAGTTTCTCGAAGAACCCAAT 58.285 39.130 6.88 0.00 33.26 3.16
1957 2112 0.537143 AGTTCCATTCTGCGCCAACA 60.537 50.000 4.18 0.00 0.00 3.33
1998 2153 2.192861 CCGTGTTGAAGCCTGCCAA 61.193 57.895 0.00 0.00 0.00 4.52
2002 2157 0.597568 TGTTGAAGCCTGCCAAATCG 59.402 50.000 0.00 0.00 0.00 3.34
2044 2199 4.070630 TGCACTTAAAAGGCAGCAAAAT 57.929 36.364 0.00 0.00 32.33 1.82
2073 2228 4.709397 AGTTCATGGGAGTAGAACAGAGAG 59.291 45.833 0.00 0.00 43.00 3.20
2158 2313 3.538591 CCGGATAGTGGTCTTAAAACCC 58.461 50.000 0.00 0.00 38.65 4.11
2165 2320 2.107726 GTGGTCTTAAAACCCACCTCCT 59.892 50.000 0.00 0.00 42.27 3.69
2174 2329 1.221840 CCCACCTCCTCAATCACCG 59.778 63.158 0.00 0.00 0.00 4.94
2231 2386 5.146298 ACTCTGATGATTCTGATGCTCCTA 58.854 41.667 0.00 0.00 30.49 2.94
2242 2397 6.983906 TCTGATGCTCCTATTGTATCAAGA 57.016 37.500 0.00 0.00 36.43 3.02
2315 2470 0.764890 TGAGTGTTTGCAGGGTAGCT 59.235 50.000 0.00 0.00 34.99 3.32
2347 2502 1.235281 TGGTCGGGCGAGATAGATCG 61.235 60.000 0.00 0.00 45.48 3.69
2371 2526 0.531532 ATGATCGCGCTGAAGAAGGG 60.532 55.000 5.56 0.00 41.73 3.95
2383 2538 2.106511 TGAAGAAGGGCACAGTAGCTTT 59.893 45.455 0.00 0.00 34.17 3.51
2637 2792 4.213694 GCTTGCCATGTCTGATATGAAGAG 59.786 45.833 15.00 10.01 0.00 2.85
2744 2899 0.109532 TGTTGATGGTGCGGAAGGAA 59.890 50.000 0.00 0.00 0.00 3.36
2847 3005 8.868103 TGCTAGATCTTCAGATTCTCAACATAT 58.132 33.333 0.00 0.00 34.37 1.78
3170 3328 9.799106 AGGTACAGTACTTACTTTTCTAGTACA 57.201 33.333 10.62 0.00 44.14 2.90
3220 3383 8.007405 AGCTTCTTTAACACATAAAAGTGGTT 57.993 30.769 0.00 0.00 43.72 3.67
3296 3459 4.670221 GCACACTCATTTGAGATTCGGAAC 60.670 45.833 14.29 0.00 44.74 3.62
3326 3489 2.324541 GATGAGCCCAGTCCTACATCT 58.675 52.381 0.00 0.00 33.67 2.90
3350 3513 1.014044 TCGATGCGCTGTTTGAGGAC 61.014 55.000 9.73 0.00 0.00 3.85
3414 3577 5.410439 ACCGCTAAACAAGGTAACACATTAG 59.590 40.000 0.00 0.00 36.34 1.73
3425 3588 7.476540 AGGTAACACATTAGTATGTCTGTCA 57.523 36.000 0.00 0.00 43.07 3.58
3472 3635 4.855388 GCATGTTAACTGTTCTGCTTCATG 59.145 41.667 7.22 5.90 34.99 3.07
3497 3667 9.555727 TGACTAACCATTATAGACATAAAAGGC 57.444 33.333 0.00 0.00 32.83 4.35
3498 3668 9.780186 GACTAACCATTATAGACATAAAAGGCT 57.220 33.333 0.00 0.00 32.83 4.58
3721 3895 5.986501 GCTAGGCCACAGTAGATACTAAT 57.013 43.478 5.01 0.00 34.13 1.73
4299 4479 2.936032 GAAGGCAGGGGGTGGTCT 60.936 66.667 0.00 0.00 0.00 3.85
4312 4492 1.984026 TGGTCTGAGATGCTGCGGA 60.984 57.895 0.00 0.00 0.00 5.54
4424 4612 6.501781 GTTGATGGATGCTCCTCTTTATTTG 58.498 40.000 4.21 0.00 37.46 2.32
4430 4618 4.519540 TGCTCCTCTTTATTTGTTTGCC 57.480 40.909 0.00 0.00 0.00 4.52
4494 4687 1.118965 TGGAGACCGTTTGCTGAGGA 61.119 55.000 0.00 0.00 0.00 3.71
4505 4698 3.842923 CTGAGGACCGGCGCATCT 61.843 66.667 10.83 0.00 0.00 2.90
4531 4724 2.028020 TCCTTGTGTGTGTGTGTGTGTA 60.028 45.455 0.00 0.00 0.00 2.90
4596 4802 1.034838 CCACTCCCCTCTCTCTGTCG 61.035 65.000 0.00 0.00 0.00 4.35
4687 4893 1.350193 ATGAGTACAGCTGCGTTTCG 58.650 50.000 15.27 0.00 0.00 3.46
4703 4909 2.813226 TTCGGAATCCTTGGCCACGG 62.813 60.000 22.28 22.28 0.00 4.94
4732 4938 8.690884 TGGAATCATCTTTTTGTGTAAAGACAA 58.309 29.630 0.00 0.00 44.42 3.18
4778 4984 3.443329 TGATGACAGCTCTGAGAACTCTC 59.557 47.826 9.28 0.00 43.15 3.20
4790 4996 1.001860 AGAACTCTCTGCAGGCTTGTC 59.998 52.381 15.13 6.69 0.00 3.18
4793 4999 1.189752 CTCTCTGCAGGCTTGTCCTA 58.810 55.000 15.13 0.00 45.52 2.94
4795 5001 1.189752 CTCTGCAGGCTTGTCCTAGA 58.810 55.000 15.13 0.00 45.52 2.43
4796 5002 1.136695 CTCTGCAGGCTTGTCCTAGAG 59.863 57.143 15.13 2.89 45.52 2.43
4797 5003 1.189752 CTGCAGGCTTGTCCTAGAGA 58.810 55.000 5.57 0.00 45.52 3.10
4798 5004 1.552337 CTGCAGGCTTGTCCTAGAGAA 59.448 52.381 5.57 0.00 45.52 2.87
4815 5021 6.934083 CCTAGAGAAAGAAAGATGGGCTTATC 59.066 42.308 0.00 0.00 35.24 1.75
4831 5038 3.386402 GCTTATCTCACTAGCTCCCAAGT 59.614 47.826 0.00 0.00 32.26 3.16
4832 5039 4.739137 GCTTATCTCACTAGCTCCCAAGTG 60.739 50.000 7.88 7.88 43.63 3.16
4833 5040 2.310779 TCTCACTAGCTCCCAAGTGT 57.689 50.000 12.86 0.00 42.96 3.55
4834 5041 3.451402 TCTCACTAGCTCCCAAGTGTA 57.549 47.619 12.86 2.29 42.96 2.90
4835 5042 3.982516 TCTCACTAGCTCCCAAGTGTAT 58.017 45.455 12.86 0.00 42.96 2.29
4836 5043 4.353777 TCTCACTAGCTCCCAAGTGTATT 58.646 43.478 12.86 0.00 42.96 1.89
4837 5044 5.516044 TCTCACTAGCTCCCAAGTGTATTA 58.484 41.667 12.86 0.00 42.96 0.98
4838 5045 5.360144 TCTCACTAGCTCCCAAGTGTATTAC 59.640 44.000 12.86 0.00 42.96 1.89
4839 5046 5.269991 TCACTAGCTCCCAAGTGTATTACT 58.730 41.667 12.86 0.00 42.96 2.24
4840 5047 6.429151 TCACTAGCTCCCAAGTGTATTACTA 58.571 40.000 12.86 0.00 42.96 1.82
4841 5048 6.320672 TCACTAGCTCCCAAGTGTATTACTAC 59.679 42.308 12.86 0.00 42.96 2.73
4842 5049 5.597594 ACTAGCTCCCAAGTGTATTACTACC 59.402 44.000 0.00 0.00 39.18 3.18
4843 5050 4.621769 AGCTCCCAAGTGTATTACTACCT 58.378 43.478 0.00 0.00 39.18 3.08
4844 5051 4.650131 AGCTCCCAAGTGTATTACTACCTC 59.350 45.833 0.00 0.00 39.18 3.85
4845 5052 4.202233 GCTCCCAAGTGTATTACTACCTCC 60.202 50.000 0.00 0.00 39.18 4.30
4846 5053 3.956199 TCCCAAGTGTATTACTACCTCCG 59.044 47.826 0.00 0.00 39.18 4.63
4847 5054 3.703052 CCCAAGTGTATTACTACCTCCGT 59.297 47.826 0.00 0.00 39.18 4.69
4848 5055 4.202090 CCCAAGTGTATTACTACCTCCGTC 60.202 50.000 0.00 0.00 39.18 4.79
4849 5056 4.497006 CCAAGTGTATTACTACCTCCGTCG 60.497 50.000 0.00 0.00 39.18 5.12
4850 5057 3.878778 AGTGTATTACTACCTCCGTCGT 58.121 45.455 0.00 0.00 38.04 4.34
4851 5058 3.873952 AGTGTATTACTACCTCCGTCGTC 59.126 47.826 0.00 0.00 38.04 4.20
4852 5059 3.002759 GTGTATTACTACCTCCGTCGTCC 59.997 52.174 0.00 0.00 0.00 4.79
4853 5060 2.725221 ATTACTACCTCCGTCGTCCT 57.275 50.000 0.00 0.00 0.00 3.85
4854 5061 1.742761 TTACTACCTCCGTCGTCCTG 58.257 55.000 0.00 0.00 0.00 3.86
4855 5062 0.107508 TACTACCTCCGTCGTCCTGG 60.108 60.000 0.00 0.00 0.00 4.45
4856 5063 1.378250 CTACCTCCGTCGTCCTGGT 60.378 63.158 0.00 0.00 35.05 4.00
4857 5064 0.964358 CTACCTCCGTCGTCCTGGTT 60.964 60.000 0.00 0.00 32.74 3.67
4858 5065 0.540365 TACCTCCGTCGTCCTGGTTT 60.540 55.000 0.00 0.00 32.74 3.27
4859 5066 0.540365 ACCTCCGTCGTCCTGGTTTA 60.540 55.000 0.00 0.00 0.00 2.01
4860 5067 0.822164 CCTCCGTCGTCCTGGTTTAT 59.178 55.000 0.00 0.00 0.00 1.40
4861 5068 2.026641 CCTCCGTCGTCCTGGTTTATA 58.973 52.381 0.00 0.00 0.00 0.98
4862 5069 2.428171 CCTCCGTCGTCCTGGTTTATAA 59.572 50.000 0.00 0.00 0.00 0.98
4863 5070 3.119029 CCTCCGTCGTCCTGGTTTATAAA 60.119 47.826 0.00 0.00 0.00 1.40
4864 5071 4.442472 CCTCCGTCGTCCTGGTTTATAAAT 60.442 45.833 0.31 0.00 0.00 1.40
4865 5072 5.221303 CCTCCGTCGTCCTGGTTTATAAATA 60.221 44.000 0.31 0.00 0.00 1.40
4866 5073 5.591099 TCCGTCGTCCTGGTTTATAAATAC 58.409 41.667 0.31 0.00 0.00 1.89
4867 5074 4.746611 CCGTCGTCCTGGTTTATAAATACC 59.253 45.833 0.31 0.16 34.93 2.73
4868 5075 4.746611 CGTCGTCCTGGTTTATAAATACCC 59.253 45.833 0.31 0.00 33.34 3.69
4869 5076 5.673514 GTCGTCCTGGTTTATAAATACCCA 58.326 41.667 0.31 3.75 33.34 4.51
4870 5077 6.293698 GTCGTCCTGGTTTATAAATACCCAT 58.706 40.000 0.31 0.00 33.34 4.00
4871 5078 6.769341 GTCGTCCTGGTTTATAAATACCCATT 59.231 38.462 0.31 0.00 33.34 3.16
4872 5079 6.768861 TCGTCCTGGTTTATAAATACCCATTG 59.231 38.462 0.31 0.26 33.34 2.82
4873 5080 6.544564 CGTCCTGGTTTATAAATACCCATTGT 59.455 38.462 0.31 0.00 33.34 2.71
4874 5081 7.716123 CGTCCTGGTTTATAAATACCCATTGTA 59.284 37.037 0.31 0.00 33.34 2.41
4875 5082 9.582648 GTCCTGGTTTATAAATACCCATTGTAT 57.417 33.333 0.31 0.00 42.06 2.29
4885 5092 6.849085 AATACCCATTGTATTTTGTGCTGA 57.151 33.333 0.00 0.00 45.78 4.26
4886 5093 6.849085 ATACCCATTGTATTTTGTGCTGAA 57.151 33.333 0.00 0.00 36.77 3.02
4887 5094 5.743636 ACCCATTGTATTTTGTGCTGAAT 57.256 34.783 0.00 0.00 0.00 2.57
4888 5095 6.112927 ACCCATTGTATTTTGTGCTGAATT 57.887 33.333 0.00 0.00 0.00 2.17
4889 5096 6.532826 ACCCATTGTATTTTGTGCTGAATTT 58.467 32.000 0.00 0.00 0.00 1.82
4890 5097 6.997476 ACCCATTGTATTTTGTGCTGAATTTT 59.003 30.769 0.00 0.00 0.00 1.82
4891 5098 7.041235 ACCCATTGTATTTTGTGCTGAATTTTG 60.041 33.333 0.00 0.00 0.00 2.44
4892 5099 7.172875 CCCATTGTATTTTGTGCTGAATTTTGA 59.827 33.333 0.00 0.00 0.00 2.69
4893 5100 8.011106 CCATTGTATTTTGTGCTGAATTTTGAC 58.989 33.333 0.00 0.00 0.00 3.18
4894 5101 8.767085 CATTGTATTTTGTGCTGAATTTTGACT 58.233 29.630 0.00 0.00 0.00 3.41
4895 5102 9.979578 ATTGTATTTTGTGCTGAATTTTGACTA 57.020 25.926 0.00 0.00 0.00 2.59
4896 5103 9.462174 TTGTATTTTGTGCTGAATTTTGACTAG 57.538 29.630 0.00 0.00 0.00 2.57
4897 5104 8.845227 TGTATTTTGTGCTGAATTTTGACTAGA 58.155 29.630 0.00 0.00 0.00 2.43
4898 5105 9.334693 GTATTTTGTGCTGAATTTTGACTAGAG 57.665 33.333 0.00 0.00 0.00 2.43
4899 5106 7.566760 TTTTGTGCTGAATTTTGACTAGAGA 57.433 32.000 0.00 0.00 0.00 3.10
4900 5107 7.750229 TTTGTGCTGAATTTTGACTAGAGAT 57.250 32.000 0.00 0.00 0.00 2.75
4901 5108 7.750229 TTGTGCTGAATTTTGACTAGAGATT 57.250 32.000 0.00 0.00 0.00 2.40
4902 5109 7.750229 TGTGCTGAATTTTGACTAGAGATTT 57.250 32.000 0.00 0.00 0.00 2.17
4903 5110 8.846943 TGTGCTGAATTTTGACTAGAGATTTA 57.153 30.769 0.00 0.00 0.00 1.40
4904 5111 9.283768 TGTGCTGAATTTTGACTAGAGATTTAA 57.716 29.630 0.00 0.00 0.00 1.52
4905 5112 9.548208 GTGCTGAATTTTGACTAGAGATTTAAC 57.452 33.333 0.00 0.00 0.00 2.01
4906 5113 9.507329 TGCTGAATTTTGACTAGAGATTTAACT 57.493 29.630 0.00 0.00 0.00 2.24
4946 5153 9.715123 TGCATGTCACTAAAAATTATATCGTTG 57.285 29.630 0.00 0.00 0.00 4.10
4947 5154 9.929722 GCATGTCACTAAAAATTATATCGTTGA 57.070 29.630 0.00 0.00 0.00 3.18
5047 5254 9.804758 AAAGTTAAAATTTGACACGGAATACAA 57.195 25.926 3.52 0.00 0.00 2.41
5048 5255 9.804758 AAGTTAAAATTTGACACGGAATACAAA 57.195 25.926 3.52 0.00 36.82 2.83
5049 5256 9.458374 AGTTAAAATTTGACACGGAATACAAAG 57.542 29.630 3.52 0.00 36.07 2.77
5050 5257 8.696175 GTTAAAATTTGACACGGAATACAAAGG 58.304 33.333 0.00 0.00 36.07 3.11
5051 5258 5.385509 AATTTGACACGGAATACAAAGGG 57.614 39.130 0.00 0.00 36.07 3.95
5052 5259 2.483014 TGACACGGAATACAAAGGGG 57.517 50.000 0.00 0.00 0.00 4.79
5053 5260 1.979308 TGACACGGAATACAAAGGGGA 59.021 47.619 0.00 0.00 0.00 4.81
5054 5261 2.289819 TGACACGGAATACAAAGGGGAC 60.290 50.000 0.00 0.00 0.00 4.46
5056 5263 3.175594 ACACGGAATACAAAGGGGACTA 58.824 45.455 0.00 0.00 42.68 2.59
5057 5264 3.197116 ACACGGAATACAAAGGGGACTAG 59.803 47.826 0.00 0.00 42.68 2.57
5058 5265 3.197116 CACGGAATACAAAGGGGACTAGT 59.803 47.826 0.00 0.00 42.68 2.57
5059 5266 4.403432 CACGGAATACAAAGGGGACTAGTA 59.597 45.833 0.00 0.00 42.68 1.82
5060 5267 5.025453 ACGGAATACAAAGGGGACTAGTAA 58.975 41.667 0.00 0.00 42.68 2.24
5061 5268 5.484998 ACGGAATACAAAGGGGACTAGTAAA 59.515 40.000 0.00 0.00 42.68 2.01
5062 5269 5.814188 CGGAATACAAAGGGGACTAGTAAAC 59.186 44.000 0.00 0.00 42.68 2.01
5063 5270 6.118170 GGAATACAAAGGGGACTAGTAAACC 58.882 44.000 0.00 0.00 42.68 3.27
5064 5271 6.296605 GGAATACAAAGGGGACTAGTAAACCA 60.297 42.308 11.53 0.00 42.68 3.67
5065 5272 4.635699 ACAAAGGGGACTAGTAAACCAG 57.364 45.455 11.53 4.99 42.68 4.00
5066 5273 3.329814 ACAAAGGGGACTAGTAAACCAGG 59.670 47.826 11.53 0.00 42.68 4.45
5067 5274 3.572661 AAGGGGACTAGTAAACCAGGA 57.427 47.619 11.53 0.00 42.68 3.86
5068 5275 3.117552 AGGGGACTAGTAAACCAGGAG 57.882 52.381 11.53 0.00 40.61 3.69
5069 5276 2.386113 AGGGGACTAGTAAACCAGGAGT 59.614 50.000 11.53 0.00 40.61 3.85
5070 5277 2.765135 GGGGACTAGTAAACCAGGAGTC 59.235 54.545 11.53 0.00 36.60 3.36
5073 5280 4.722361 GACTAGTAAACCAGGAGTCCAG 57.278 50.000 12.86 2.60 32.16 3.86
5074 5281 3.442076 ACTAGTAAACCAGGAGTCCAGG 58.558 50.000 18.76 18.76 36.18 4.45
5075 5282 2.715763 AGTAAACCAGGAGTCCAGGA 57.284 50.000 26.47 1.78 34.08 3.86
5076 5283 2.258109 AGTAAACCAGGAGTCCAGGAC 58.742 52.381 26.47 12.25 34.08 3.85
5077 5284 1.067071 GTAAACCAGGAGTCCAGGACG 60.067 57.143 26.47 1.85 37.67 4.79
5078 5285 1.481056 AAACCAGGAGTCCAGGACGG 61.481 60.000 26.47 11.48 37.67 4.79
5079 5286 2.037367 CCAGGAGTCCAGGACGGA 59.963 66.667 15.54 0.00 43.61 4.69
5089 5296 3.498774 TCCAGGACGGAGGTAGTATAC 57.501 52.381 0.00 0.00 39.64 1.47
5090 5297 2.779430 TCCAGGACGGAGGTAGTATACA 59.221 50.000 5.50 0.00 40.82 2.29
5091 5298 2.883386 CCAGGACGGAGGTAGTATACAC 59.117 54.545 5.50 1.57 39.71 2.90
5092 5299 3.434739 CCAGGACGGAGGTAGTATACACT 60.435 52.174 5.50 0.00 39.71 3.55
5093 5300 4.202398 CCAGGACGGAGGTAGTATACACTA 60.202 50.000 5.50 0.00 39.71 2.74
5094 5301 5.371526 CAGGACGGAGGTAGTATACACTAA 58.628 45.833 5.50 0.00 45.43 2.24
5095 5302 5.469421 CAGGACGGAGGTAGTATACACTAAG 59.531 48.000 5.50 1.39 45.43 2.18
5096 5303 4.759183 GGACGGAGGTAGTATACACTAAGG 59.241 50.000 5.50 0.00 45.43 2.69
5097 5304 4.140536 ACGGAGGTAGTATACACTAAGGC 58.859 47.826 5.50 0.00 45.43 4.35
5098 5305 3.505293 CGGAGGTAGTATACACTAAGGCC 59.495 52.174 5.50 0.00 45.43 5.19
5099 5306 3.831333 GGAGGTAGTATACACTAAGGCCC 59.169 52.174 5.50 0.00 45.43 5.80
5100 5307 4.448934 GGAGGTAGTATACACTAAGGCCCT 60.449 50.000 5.50 0.00 45.43 5.19
5101 5308 4.481072 AGGTAGTATACACTAAGGCCCTG 58.519 47.826 5.50 0.00 45.43 4.45
5102 5309 4.078747 AGGTAGTATACACTAAGGCCCTGT 60.079 45.833 5.50 0.00 45.43 4.00
5103 5310 4.652881 GGTAGTATACACTAAGGCCCTGTT 59.347 45.833 5.50 0.00 45.43 3.16
5104 5311 5.129980 GGTAGTATACACTAAGGCCCTGTTT 59.870 44.000 5.50 0.00 45.43 2.83
5105 5312 5.099042 AGTATACACTAAGGCCCTGTTTG 57.901 43.478 5.50 0.00 31.45 2.93
5106 5313 4.534897 AGTATACACTAAGGCCCTGTTTGT 59.465 41.667 5.50 0.00 31.45 2.83
5107 5314 2.748209 ACACTAAGGCCCTGTTTGTT 57.252 45.000 0.00 0.00 0.00 2.83
5108 5315 3.026707 ACACTAAGGCCCTGTTTGTTT 57.973 42.857 0.00 0.00 0.00 2.83
5109 5316 2.956333 ACACTAAGGCCCTGTTTGTTTC 59.044 45.455 0.00 0.00 0.00 2.78
5110 5317 2.955660 CACTAAGGCCCTGTTTGTTTCA 59.044 45.455 0.00 0.00 0.00 2.69
5111 5318 3.573967 CACTAAGGCCCTGTTTGTTTCAT 59.426 43.478 0.00 0.00 0.00 2.57
5112 5319 4.764823 CACTAAGGCCCTGTTTGTTTCATA 59.235 41.667 0.00 0.00 0.00 2.15
5113 5320 5.242838 CACTAAGGCCCTGTTTGTTTCATAA 59.757 40.000 0.00 0.00 0.00 1.90
5114 5321 4.871933 AAGGCCCTGTTTGTTTCATAAG 57.128 40.909 0.00 0.00 0.00 1.73
5115 5322 3.844640 AGGCCCTGTTTGTTTCATAAGT 58.155 40.909 0.00 0.00 0.00 2.24
5116 5323 3.826729 AGGCCCTGTTTGTTTCATAAGTC 59.173 43.478 0.00 0.00 0.00 3.01
5117 5324 3.056821 GGCCCTGTTTGTTTCATAAGTCC 60.057 47.826 0.00 0.00 0.00 3.85
5118 5325 3.826729 GCCCTGTTTGTTTCATAAGTCCT 59.173 43.478 0.00 0.00 0.00 3.85
5119 5326 5.007682 GCCCTGTTTGTTTCATAAGTCCTA 58.992 41.667 0.00 0.00 0.00 2.94
5120 5327 5.123979 GCCCTGTTTGTTTCATAAGTCCTAG 59.876 44.000 0.00 0.00 0.00 3.02
5121 5328 6.472887 CCCTGTTTGTTTCATAAGTCCTAGA 58.527 40.000 0.00 0.00 0.00 2.43
5122 5329 6.940298 CCCTGTTTGTTTCATAAGTCCTAGAA 59.060 38.462 0.00 0.00 0.00 2.10
5123 5330 7.094762 CCCTGTTTGTTTCATAAGTCCTAGAAC 60.095 40.741 0.00 0.00 0.00 3.01
5124 5331 7.661847 CCTGTTTGTTTCATAAGTCCTAGAACT 59.338 37.037 0.00 0.00 0.00 3.01
5125 5332 8.974060 TGTTTGTTTCATAAGTCCTAGAACTT 57.026 30.769 0.00 0.00 42.10 2.66
5126 5333 9.403583 TGTTTGTTTCATAAGTCCTAGAACTTT 57.596 29.630 0.00 0.00 40.01 2.66
5155 5362 8.834749 AAGTCCAAACTTATAAGTCAGAAGTC 57.165 34.615 18.28 6.78 43.98 3.01
5156 5363 7.387643 AGTCCAAACTTATAAGTCAGAAGTCC 58.612 38.462 18.28 4.72 37.72 3.85
5157 5364 6.594547 GTCCAAACTTATAAGTCAGAAGTCCC 59.405 42.308 18.28 1.31 37.72 4.46
5158 5365 6.500751 TCCAAACTTATAAGTCAGAAGTCCCT 59.499 38.462 18.28 0.00 37.72 4.20
5159 5366 7.676893 TCCAAACTTATAAGTCAGAAGTCCCTA 59.323 37.037 18.28 0.00 37.72 3.53
5160 5367 7.764901 CCAAACTTATAAGTCAGAAGTCCCTAC 59.235 40.741 18.28 0.00 37.72 3.18
5161 5368 7.421087 AACTTATAAGTCAGAAGTCCCTACC 57.579 40.000 18.28 0.00 37.72 3.18
5162 5369 6.743788 ACTTATAAGTCAGAAGTCCCTACCT 58.256 40.000 12.50 0.00 33.34 3.08
5163 5370 6.608002 ACTTATAAGTCAGAAGTCCCTACCTG 59.392 42.308 12.50 0.00 33.34 4.00
5164 5371 3.261818 AAGTCAGAAGTCCCTACCTGT 57.738 47.619 0.00 0.00 0.00 4.00
5165 5372 3.261818 AGTCAGAAGTCCCTACCTGTT 57.738 47.619 0.00 0.00 0.00 3.16
5166 5373 3.588569 AGTCAGAAGTCCCTACCTGTTT 58.411 45.455 0.00 0.00 0.00 2.83
5167 5374 3.325135 AGTCAGAAGTCCCTACCTGTTTG 59.675 47.826 0.00 0.00 0.00 2.93
5168 5375 3.071167 GTCAGAAGTCCCTACCTGTTTGT 59.929 47.826 0.00 0.00 0.00 2.83
5169 5376 3.714798 TCAGAAGTCCCTACCTGTTTGTT 59.285 43.478 0.00 0.00 0.00 2.83
5170 5377 4.165372 TCAGAAGTCCCTACCTGTTTGTTT 59.835 41.667 0.00 0.00 0.00 2.83
5171 5378 5.367352 TCAGAAGTCCCTACCTGTTTGTTTA 59.633 40.000 0.00 0.00 0.00 2.01
5172 5379 5.469084 CAGAAGTCCCTACCTGTTTGTTTAC 59.531 44.000 0.00 0.00 0.00 2.01
5173 5380 5.131475 AGAAGTCCCTACCTGTTTGTTTACA 59.869 40.000 0.00 0.00 0.00 2.41
5174 5381 4.969484 AGTCCCTACCTGTTTGTTTACAG 58.031 43.478 0.00 0.00 44.07 2.74
5175 5382 4.657039 AGTCCCTACCTGTTTGTTTACAGA 59.343 41.667 5.39 0.00 46.72 3.41
5176 5383 4.995487 GTCCCTACCTGTTTGTTTACAGAG 59.005 45.833 5.39 0.00 46.72 3.35
5177 5384 4.903049 TCCCTACCTGTTTGTTTACAGAGA 59.097 41.667 5.39 0.00 46.72 3.10
5178 5385 4.995487 CCCTACCTGTTTGTTTACAGAGAC 59.005 45.833 5.39 0.00 46.72 3.36
5179 5386 5.221661 CCCTACCTGTTTGTTTACAGAGACT 60.222 44.000 5.39 0.00 46.72 3.24
5180 5387 6.289064 CCTACCTGTTTGTTTACAGAGACTT 58.711 40.000 5.39 0.00 46.72 3.01
5181 5388 7.439381 CCTACCTGTTTGTTTACAGAGACTTA 58.561 38.462 5.39 0.00 46.72 2.24
5182 5389 8.095169 CCTACCTGTTTGTTTACAGAGACTTAT 58.905 37.037 5.39 0.00 46.72 1.73
5185 5392 9.490379 ACCTGTTTGTTTACAGAGACTTATAAG 57.510 33.333 11.05 11.05 46.72 1.73
5186 5393 9.490379 CCTGTTTGTTTACAGAGACTTATAAGT 57.510 33.333 18.05 18.05 46.72 2.24
5197 5404 3.684408 ACTTATAAGTCCCGAGTCCCT 57.316 47.619 12.50 0.00 32.86 4.20
5198 5405 4.803329 ACTTATAAGTCCCGAGTCCCTA 57.197 45.455 12.50 0.00 32.86 3.53
5199 5406 4.468713 ACTTATAAGTCCCGAGTCCCTAC 58.531 47.826 12.50 0.00 32.86 3.18
5200 5407 2.378378 ATAAGTCCCGAGTCCCTACC 57.622 55.000 0.00 0.00 0.00 3.18
5201 5408 1.302907 TAAGTCCCGAGTCCCTACCT 58.697 55.000 0.00 0.00 0.00 3.08
5202 5409 0.324460 AAGTCCCGAGTCCCTACCTG 60.324 60.000 0.00 0.00 0.00 4.00
5203 5410 1.000107 GTCCCGAGTCCCTACCTGT 60.000 63.158 0.00 0.00 0.00 4.00
5204 5411 0.614134 GTCCCGAGTCCCTACCTGTT 60.614 60.000 0.00 0.00 0.00 3.16
5205 5412 0.115745 TCCCGAGTCCCTACCTGTTT 59.884 55.000 0.00 0.00 0.00 2.83
5206 5413 0.249398 CCCGAGTCCCTACCTGTTTG 59.751 60.000 0.00 0.00 0.00 2.93
5207 5414 0.974383 CCGAGTCCCTACCTGTTTGT 59.026 55.000 0.00 0.00 0.00 2.83
5208 5415 1.346722 CCGAGTCCCTACCTGTTTGTT 59.653 52.381 0.00 0.00 0.00 2.83
5209 5416 2.224450 CCGAGTCCCTACCTGTTTGTTT 60.224 50.000 0.00 0.00 0.00 2.83
5210 5417 3.007182 CCGAGTCCCTACCTGTTTGTTTA 59.993 47.826 0.00 0.00 0.00 2.01
5211 5418 3.992427 CGAGTCCCTACCTGTTTGTTTAC 59.008 47.826 0.00 0.00 0.00 2.01
5212 5419 4.501915 CGAGTCCCTACCTGTTTGTTTACA 60.502 45.833 0.00 0.00 0.00 2.41
5213 5420 4.969484 AGTCCCTACCTGTTTGTTTACAG 58.031 43.478 0.00 0.00 44.07 2.74
5225 5432 8.617290 CTGTTTGTTTACAGGGACTTATAAGT 57.383 34.615 18.05 18.05 41.43 2.24
5226 5433 8.718734 CTGTTTGTTTACAGGGACTTATAAGTC 58.281 37.037 29.84 29.84 43.68 3.01
5238 5445 3.938963 ACTTATAAGTCCATGTTGCACCG 59.061 43.478 12.50 0.00 32.86 4.94
5239 5446 1.094785 ATAAGTCCATGTTGCACCGC 58.905 50.000 0.00 0.00 0.00 5.68
5240 5447 0.036164 TAAGTCCATGTTGCACCGCT 59.964 50.000 0.00 0.00 0.00 5.52
5241 5448 1.518056 AAGTCCATGTTGCACCGCTG 61.518 55.000 0.00 0.00 0.00 5.18
5242 5449 3.364441 TCCATGTTGCACCGCTGC 61.364 61.111 0.00 0.00 44.52 5.25
5254 5461 3.485431 CGCTGCAACGAGGCTCAG 61.485 66.667 15.95 9.88 34.06 3.35
5255 5462 3.123620 GCTGCAACGAGGCTCAGG 61.124 66.667 15.95 4.00 34.04 3.86
5256 5463 2.659016 CTGCAACGAGGCTCAGGA 59.341 61.111 15.95 4.03 34.04 3.86
5257 5464 1.447489 CTGCAACGAGGCTCAGGAG 60.447 63.158 15.95 10.20 34.04 3.69
5258 5465 1.881903 CTGCAACGAGGCTCAGGAGA 61.882 60.000 15.95 0.00 34.04 3.71
5259 5466 1.153667 GCAACGAGGCTCAGGAGAG 60.154 63.158 15.95 0.00 44.96 3.20
5260 5467 1.515020 CAACGAGGCTCAGGAGAGG 59.485 63.158 15.95 0.00 42.33 3.69
5261 5468 1.684049 AACGAGGCTCAGGAGAGGG 60.684 63.158 15.95 0.00 42.33 4.30
5262 5469 3.535962 CGAGGCTCAGGAGAGGGC 61.536 72.222 15.95 0.00 42.33 5.19
5263 5470 2.042025 GAGGCTCAGGAGAGGGCT 60.042 66.667 10.25 0.00 42.33 5.19
5264 5471 1.688884 GAGGCTCAGGAGAGGGCTT 60.689 63.158 10.25 0.00 42.33 4.35
5265 5472 1.970352 GAGGCTCAGGAGAGGGCTTG 61.970 65.000 10.25 0.00 42.33 4.01
5266 5473 2.297129 GGCTCAGGAGAGGGCTTGT 61.297 63.158 0.00 0.00 42.33 3.16
5267 5474 1.220477 GCTCAGGAGAGGGCTTGTC 59.780 63.158 0.00 0.00 42.33 3.18
5268 5475 1.904032 CTCAGGAGAGGGCTTGTCC 59.096 63.158 4.45 4.45 38.26 4.02
5269 5476 1.954362 CTCAGGAGAGGGCTTGTCCG 61.954 65.000 7.17 3.11 38.26 4.79
5270 5477 2.685380 AGGAGAGGGCTTGTCCGG 60.685 66.667 7.17 0.00 35.33 5.14
5271 5478 4.475135 GGAGAGGGCTTGTCCGGC 62.475 72.222 0.00 0.00 34.94 6.13
5272 5479 4.821589 GAGAGGGCTTGTCCGGCG 62.822 72.222 0.00 0.00 34.94 6.46
5274 5481 4.162690 GAGGGCTTGTCCGGCGAT 62.163 66.667 9.30 0.00 34.94 4.58
5275 5482 3.682292 GAGGGCTTGTCCGGCGATT 62.682 63.158 9.30 0.00 34.94 3.34
5276 5483 3.508840 GGGCTTGTCCGGCGATTG 61.509 66.667 9.30 0.00 34.94 2.67
5277 5484 3.508840 GGCTTGTCCGGCGATTGG 61.509 66.667 9.30 0.00 0.00 3.16
5278 5485 2.435938 GCTTGTCCGGCGATTGGA 60.436 61.111 9.30 0.00 0.00 3.53
5279 5486 2.464459 GCTTGTCCGGCGATTGGAG 61.464 63.158 9.30 0.33 35.82 3.86
5280 5487 1.815421 CTTGTCCGGCGATTGGAGG 60.815 63.158 9.30 0.00 35.82 4.30
5281 5488 3.969250 TTGTCCGGCGATTGGAGGC 62.969 63.158 9.30 0.00 35.82 4.70
5282 5489 4.467084 GTCCGGCGATTGGAGGCA 62.467 66.667 9.30 0.00 35.82 4.75
5283 5490 4.467084 TCCGGCGATTGGAGGCAC 62.467 66.667 9.30 0.00 0.00 5.01
5288 5495 3.197790 CGATTGGAGGCACCGCTG 61.198 66.667 0.00 0.00 42.61 5.18
5289 5496 3.512516 GATTGGAGGCACCGCTGC 61.513 66.667 0.00 0.00 43.41 5.25
5290 5497 4.349503 ATTGGAGGCACCGCTGCA 62.350 61.111 4.88 0.00 46.28 4.41
5291 5498 3.866379 ATTGGAGGCACCGCTGCAA 62.866 57.895 4.88 1.06 46.28 4.08
5295 5502 4.927782 AGGCACCGCTGCAACGAA 62.928 61.111 11.83 0.00 46.28 3.85
5296 5503 4.683334 GGCACCGCTGCAACGAAC 62.683 66.667 11.83 0.00 46.28 3.95
5297 5504 4.683334 GCACCGCTGCAACGAACC 62.683 66.667 11.83 0.00 43.62 3.62
5298 5505 4.368808 CACCGCTGCAACGAACCG 62.369 66.667 11.83 0.00 34.06 4.44
5299 5506 4.595538 ACCGCTGCAACGAACCGA 62.596 61.111 11.83 0.00 34.06 4.69
5300 5507 3.777925 CCGCTGCAACGAACCGAG 61.778 66.667 11.83 0.00 34.06 4.63
5301 5508 3.777925 CGCTGCAACGAACCGAGG 61.778 66.667 2.68 0.00 34.06 4.63
5302 5509 4.090057 GCTGCAACGAACCGAGGC 62.090 66.667 0.00 0.00 0.00 4.70
5303 5510 2.664851 CTGCAACGAACCGAGGCA 60.665 61.111 0.00 0.00 37.20 4.75
5304 5511 2.664851 TGCAACGAACCGAGGCAG 60.665 61.111 0.00 0.00 35.54 4.85
5305 5512 2.357034 GCAACGAACCGAGGCAGA 60.357 61.111 0.00 0.00 32.26 4.26
5306 5513 1.959226 GCAACGAACCGAGGCAGAA 60.959 57.895 0.00 0.00 32.26 3.02
5307 5514 1.860078 CAACGAACCGAGGCAGAAC 59.140 57.895 0.00 0.00 0.00 3.01
5308 5515 1.663702 AACGAACCGAGGCAGAACG 60.664 57.895 0.00 0.00 0.00 3.95
5309 5516 2.079020 AACGAACCGAGGCAGAACGA 62.079 55.000 0.00 0.00 0.00 3.85
5310 5517 1.372499 CGAACCGAGGCAGAACGAA 60.372 57.895 0.00 0.00 0.00 3.85
5311 5518 1.615107 CGAACCGAGGCAGAACGAAC 61.615 60.000 0.00 0.00 0.00 3.95
5312 5519 1.289800 GAACCGAGGCAGAACGAACC 61.290 60.000 0.00 0.00 0.00 3.62
5313 5520 2.809601 CCGAGGCAGAACGAACCG 60.810 66.667 0.00 0.00 0.00 4.44
5314 5521 2.257371 CGAGGCAGAACGAACCGA 59.743 61.111 0.00 0.00 0.00 4.69
5315 5522 1.801913 CGAGGCAGAACGAACCGAG 60.802 63.158 0.00 0.00 0.00 4.63
5316 5523 1.446272 GAGGCAGAACGAACCGAGG 60.446 63.158 0.00 0.00 0.00 4.63
5317 5524 3.119096 GGCAGAACGAACCGAGGC 61.119 66.667 0.00 0.00 0.00 4.70
5318 5525 3.479269 GCAGAACGAACCGAGGCG 61.479 66.667 0.00 0.00 0.00 5.52
5351 5558 3.119096 GGCGAACCGAGGCAGAAC 61.119 66.667 0.00 0.00 0.00 3.01
5352 5559 3.479269 GCGAACCGAGGCAGAACG 61.479 66.667 0.00 0.00 0.00 3.95
5353 5560 2.257371 CGAACCGAGGCAGAACGA 59.743 61.111 0.00 0.00 0.00 3.85
5354 5561 1.372499 CGAACCGAGGCAGAACGAA 60.372 57.895 0.00 0.00 0.00 3.85
5355 5562 1.615107 CGAACCGAGGCAGAACGAAC 61.615 60.000 0.00 0.00 0.00 3.95
5356 5563 1.289800 GAACCGAGGCAGAACGAACC 61.290 60.000 0.00 0.00 0.00 3.62
5357 5564 2.809601 CCGAGGCAGAACGAACCG 60.810 66.667 0.00 0.00 0.00 4.44
5358 5565 2.257371 CGAGGCAGAACGAACCGA 59.743 61.111 0.00 0.00 0.00 4.69
5359 5566 1.801913 CGAGGCAGAACGAACCGAG 60.802 63.158 0.00 0.00 0.00 4.63
5360 5567 1.446272 GAGGCAGAACGAACCGAGG 60.446 63.158 0.00 0.00 0.00 4.63
5361 5568 3.119096 GGCAGAACGAACCGAGGC 61.119 66.667 0.00 0.00 0.00 4.70
5362 5569 3.479269 GCAGAACGAACCGAGGCG 61.479 66.667 0.00 0.00 0.00 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.530019 TTGATTTTCTGCCCTCCTATTTTC 57.470 37.500 0.00 0.00 0.00 2.29
35 36 1.521681 CGTCCGCCCATCCTTCTTC 60.522 63.158 0.00 0.00 0.00 2.87
43 44 1.969589 GGTTTTGTCGTCCGCCCAT 60.970 57.895 0.00 0.00 0.00 4.00
96 97 4.989797 TGCCAGCATTACAAAACAATTCAG 59.010 37.500 0.00 0.00 0.00 3.02
98 99 4.143347 CGTGCCAGCATTACAAAACAATTC 60.143 41.667 0.00 0.00 0.00 2.17
99 100 3.740321 CGTGCCAGCATTACAAAACAATT 59.260 39.130 0.00 0.00 0.00 2.32
107 108 0.673333 CTCACCGTGCCAGCATTACA 60.673 55.000 0.00 0.00 0.00 2.41
108 109 0.673644 ACTCACCGTGCCAGCATTAC 60.674 55.000 0.00 0.00 0.00 1.89
110 111 1.228245 AACTCACCGTGCCAGCATT 60.228 52.632 0.00 0.00 0.00 3.56
117 118 1.014352 ACACAAAGAACTCACCGTGC 58.986 50.000 0.00 0.00 0.00 5.34
127 128 2.881513 ACACACACACACACACAAAGAA 59.118 40.909 0.00 0.00 0.00 2.52
128 129 2.225255 CACACACACACACACACAAAGA 59.775 45.455 0.00 0.00 0.00 2.52
129 130 2.031245 ACACACACACACACACACAAAG 60.031 45.455 0.00 0.00 0.00 2.77
130 131 1.950216 ACACACACACACACACACAAA 59.050 42.857 0.00 0.00 0.00 2.83
131 132 1.265365 CACACACACACACACACACAA 59.735 47.619 0.00 0.00 0.00 3.33
132 133 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
133 134 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
134 135 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
135 136 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
136 137 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
137 138 1.152510 TCACACACACACACACACAC 58.847 50.000 0.00 0.00 0.00 3.82
138 139 1.736681 CATCACACACACACACACACA 59.263 47.619 0.00 0.00 0.00 3.72
139 140 1.063912 CCATCACACACACACACACAC 59.936 52.381 0.00 0.00 0.00 3.82
140 141 1.065854 TCCATCACACACACACACACA 60.066 47.619 0.00 0.00 0.00 3.72
141 142 1.599071 CTCCATCACACACACACACAC 59.401 52.381 0.00 0.00 0.00 3.82
142 143 1.952193 CTCCATCACACACACACACA 58.048 50.000 0.00 0.00 0.00 3.72
143 144 0.588252 GCTCCATCACACACACACAC 59.412 55.000 0.00 0.00 0.00 3.82
144 145 0.179936 TGCTCCATCACACACACACA 59.820 50.000 0.00 0.00 0.00 3.72
145 146 0.870393 CTGCTCCATCACACACACAC 59.130 55.000 0.00 0.00 0.00 3.82
146 147 0.886043 GCTGCTCCATCACACACACA 60.886 55.000 0.00 0.00 0.00 3.72
147 148 1.580845 GGCTGCTCCATCACACACAC 61.581 60.000 0.00 0.00 34.01 3.82
148 149 1.302752 GGCTGCTCCATCACACACA 60.303 57.895 0.00 0.00 34.01 3.72
149 150 1.302752 TGGCTGCTCCATCACACAC 60.303 57.895 0.00 0.00 40.72 3.82
150 151 3.159615 TGGCTGCTCCATCACACA 58.840 55.556 0.00 0.00 40.72 3.72
179 180 0.185901 AAAGGTGGCAGCTCCTTTCA 59.814 50.000 20.86 0.00 46.94 2.69
180 181 3.042481 AAAGGTGGCAGCTCCTTTC 57.958 52.632 20.86 0.00 46.94 2.62
182 183 0.185901 TCAAAAGGTGGCAGCTCCTT 59.814 50.000 20.86 10.96 44.71 3.36
183 184 0.407139 ATCAAAAGGTGGCAGCTCCT 59.593 50.000 20.86 4.20 35.26 3.69
275 289 0.036448 TCGTAGCGGATAGGAGAGGG 59.964 60.000 0.00 0.00 0.00 4.30
598 635 2.830370 CCCTCCTTGGCGCCAATC 60.830 66.667 40.03 8.59 35.20 2.67
791 869 2.208132 TGGGCGGATTAAAAGCTGAA 57.792 45.000 0.00 0.00 0.00 3.02
819 906 1.273327 CAAAGCAGAGGCCGGAAAAAT 59.727 47.619 5.05 0.00 42.56 1.82
820 907 0.673437 CAAAGCAGAGGCCGGAAAAA 59.327 50.000 5.05 0.00 42.56 1.94
821 908 1.805428 GCAAAGCAGAGGCCGGAAAA 61.805 55.000 5.05 0.00 42.56 2.29
822 909 2.268076 GCAAAGCAGAGGCCGGAAA 61.268 57.895 5.05 0.00 42.56 3.13
824 911 3.612247 GAGCAAAGCAGAGGCCGGA 62.612 63.158 5.05 0.00 42.56 5.14
825 912 3.130160 GAGCAAAGCAGAGGCCGG 61.130 66.667 0.00 0.00 42.56 6.13
826 913 3.494336 CGAGCAAAGCAGAGGCCG 61.494 66.667 0.00 0.00 42.56 6.13
827 914 3.808656 GCGAGCAAAGCAGAGGCC 61.809 66.667 0.00 0.00 42.56 5.19
828 915 2.331132 AAGCGAGCAAAGCAGAGGC 61.331 57.895 0.00 0.00 41.61 4.70
829 916 1.500844 CAAGCGAGCAAAGCAGAGG 59.499 57.895 0.00 0.00 37.01 3.69
830 917 1.154263 GCAAGCGAGCAAAGCAGAG 60.154 57.895 0.00 0.00 37.01 3.35
831 918 1.168407 AAGCAAGCGAGCAAAGCAGA 61.168 50.000 6.21 0.00 36.85 4.26
832 919 0.318445 AAAGCAAGCGAGCAAAGCAG 60.318 50.000 6.21 0.00 36.85 4.24
833 920 0.318107 GAAAGCAAGCGAGCAAAGCA 60.318 50.000 6.21 0.00 36.85 3.91
834 921 0.318107 TGAAAGCAAGCGAGCAAAGC 60.318 50.000 6.21 0.00 36.85 3.51
835 922 2.124011 TTGAAAGCAAGCGAGCAAAG 57.876 45.000 6.21 0.00 36.85 2.77
865 952 4.594970 AGTCGGGAGGTATCATAGAGATG 58.405 47.826 0.00 0.00 37.57 2.90
867 954 4.726035 AAGTCGGGAGGTATCATAGAGA 57.274 45.455 0.00 0.00 0.00 3.10
868 955 7.469537 AAATAAGTCGGGAGGTATCATAGAG 57.530 40.000 0.00 0.00 0.00 2.43
869 956 7.507956 TGAAAATAAGTCGGGAGGTATCATAGA 59.492 37.037 0.00 0.00 0.00 1.98
870 957 7.599245 GTGAAAATAAGTCGGGAGGTATCATAG 59.401 40.741 0.00 0.00 0.00 2.23
871 958 7.289317 AGTGAAAATAAGTCGGGAGGTATCATA 59.711 37.037 0.00 0.00 0.00 2.15
872 959 6.099845 AGTGAAAATAAGTCGGGAGGTATCAT 59.900 38.462 0.00 0.00 0.00 2.45
874 980 5.915175 AGTGAAAATAAGTCGGGAGGTATC 58.085 41.667 0.00 0.00 0.00 2.24
878 984 4.631813 CAGAAGTGAAAATAAGTCGGGAGG 59.368 45.833 0.00 0.00 0.00 4.30
879 985 4.093556 GCAGAAGTGAAAATAAGTCGGGAG 59.906 45.833 0.00 0.00 0.00 4.30
883 989 5.669848 GCAGAGCAGAAGTGAAAATAAGTCG 60.670 44.000 0.00 0.00 0.00 4.18
905 1012 0.250467 GTGTGCCTGGAGAAGAAGCA 60.250 55.000 0.00 0.00 0.00 3.91
906 1019 0.036022 AGTGTGCCTGGAGAAGAAGC 59.964 55.000 0.00 0.00 0.00 3.86
1095 1221 3.343617 AGTTAACCAATCATGTGTCCGG 58.656 45.455 0.88 0.00 0.00 5.14
1100 1226 3.758023 TGGCAGAGTTAACCAATCATGTG 59.242 43.478 0.88 0.00 0.00 3.21
1121 1247 6.379133 TCTTCTCTTCCCCATGAAAAATCATG 59.621 38.462 11.01 11.01 45.09 3.07
1132 1258 1.367848 AGGAGGTCTTCTCTTCCCCAT 59.632 52.381 0.00 0.00 42.10 4.00
1151 1288 6.036083 CCACTAACCGAAGAACAATCATACAG 59.964 42.308 0.00 0.00 0.00 2.74
1295 1445 0.525242 CACAAACACACGGTTGCCAG 60.525 55.000 0.00 0.00 40.35 4.85
1300 1450 2.095466 CACTCAACACAAACACACGGTT 60.095 45.455 0.00 0.00 42.98 4.44
1301 1451 1.466950 CACTCAACACAAACACACGGT 59.533 47.619 0.00 0.00 0.00 4.83
1302 1452 1.466950 ACACTCAACACAAACACACGG 59.533 47.619 0.00 0.00 0.00 4.94
1303 1453 2.769376 GACACTCAACACAAACACACG 58.231 47.619 0.00 0.00 0.00 4.49
1305 1455 2.413796 GTCGACACTCAACACAAACACA 59.586 45.455 11.55 0.00 0.00 3.72
1308 1458 2.671396 ACAGTCGACACTCAACACAAAC 59.329 45.455 19.50 0.00 0.00 2.93
1317 1467 3.902150 TGAGATTTGACAGTCGACACTC 58.098 45.455 19.50 11.68 0.00 3.51
1324 1474 5.470098 TGTAAAAGGCTGAGATTTGACAGTC 59.530 40.000 0.00 0.00 38.78 3.51
1341 1492 6.845302 TGCAATGATAAGCAGACTGTAAAAG 58.155 36.000 3.99 0.00 35.51 2.27
1399 1554 2.438614 TCCGACGAGCTCCTCCTG 60.439 66.667 8.47 0.00 0.00 3.86
1443 1598 1.093496 CATCTCCTGCGCAATCAGCA 61.093 55.000 13.05 0.00 46.13 4.41
1486 1641 7.066284 AGCCTTGCTATAACATTAGTGTTCTTG 59.934 37.037 6.91 0.70 41.74 3.02
1637 1792 3.057033 ACATTTTCAACAGAGCCTGCATC 60.057 43.478 0.00 0.00 34.37 3.91
1718 1873 4.100189 CCTCCCTCTGTATGAAGAATCGTT 59.900 45.833 0.00 0.00 0.00 3.85
1730 1885 0.042581 TCATGTGGCCTCCCTCTGTA 59.957 55.000 3.32 0.00 0.00 2.74
1733 1888 0.252881 TCTTCATGTGGCCTCCCTCT 60.253 55.000 3.32 0.00 0.00 3.69
1754 1909 7.331026 ACGAGATCCATTCTTTTCTTGTCATA 58.669 34.615 0.00 0.00 33.74 2.15
1957 2112 2.957402 TTTGCTTCCTCTGTGGTGAT 57.043 45.000 0.00 0.00 37.07 3.06
1998 2153 1.066573 CACTCTTCAGCTCCACCGATT 60.067 52.381 0.00 0.00 0.00 3.34
2002 2157 2.550830 TTTCACTCTTCAGCTCCACC 57.449 50.000 0.00 0.00 0.00 4.61
2112 2267 0.886490 CTGTGGACGCCTTTCTGCTT 60.886 55.000 0.00 0.00 0.00 3.91
2158 2313 0.742281 CTGCGGTGATTGAGGAGGTG 60.742 60.000 0.00 0.00 0.00 4.00
2165 2320 1.742880 GCTCTGCTGCGGTGATTGA 60.743 57.895 14.25 0.00 0.00 2.57
2174 2329 0.664761 TGTTGAAACTGCTCTGCTGC 59.335 50.000 0.00 0.00 0.00 5.25
2231 2386 7.333323 TCATCACTCACATGTCTTGATACAAT 58.667 34.615 11.30 0.00 32.02 2.71
2242 2397 5.394993 CCAGTGTATCTCATCACTCACATGT 60.395 44.000 0.00 0.00 42.05 3.21
2315 2470 3.537580 GCCCGACCATATTTGACTGTAA 58.462 45.455 0.00 0.00 0.00 2.41
2347 2502 4.090642 CCTTCTTCAGCGCGATCATAATAC 59.909 45.833 12.10 0.00 0.00 1.89
2371 2526 2.003301 GAGCCACTAAAGCTACTGTGC 58.997 52.381 7.21 0.00 41.75 4.57
2373 2528 1.204941 CCGAGCCACTAAAGCTACTGT 59.795 52.381 0.00 0.00 41.75 3.55
2383 2538 0.902984 TTCCAAGCTCCGAGCCACTA 60.903 55.000 16.99 0.00 43.77 2.74
2432 2587 3.538634 AGGATTGCTAAACCGGTAGAC 57.461 47.619 8.00 0.00 0.00 2.59
2637 2792 4.394300 CCACCTGATCAACAACATCTTCTC 59.606 45.833 0.00 0.00 0.00 2.87
2744 2899 7.173735 CCTTGAAATTTTATTGCTGGAGCTTTT 59.826 33.333 0.00 0.00 42.66 2.27
2847 3005 0.323629 CTTCGGGGTTGTGGCTTCTA 59.676 55.000 0.00 0.00 0.00 2.10
2878 3036 3.970640 GAGATGACTTCCCATTCCTAGGT 59.029 47.826 9.08 0.00 0.00 3.08
3220 3383 7.931578 ATTATCCGTCCAAGTTAACAAATCA 57.068 32.000 8.61 0.00 0.00 2.57
3296 3459 2.082231 CTGGGCTCATCAAAGTGTGAG 58.918 52.381 0.00 0.00 43.62 3.51
3326 3489 0.512518 CAAACAGCGCATCGAGAACA 59.487 50.000 11.47 0.00 0.00 3.18
3350 3513 3.152341 ACTGGCAGACTTTTCATTCCTG 58.848 45.455 23.66 0.00 0.00 3.86
3425 3588 6.762661 GCCACATTGCCAGAAAATTATTACAT 59.237 34.615 0.00 0.00 0.00 2.29
3472 3635 9.780186 AGCCTTTTATGTCTATAATGGTTAGTC 57.220 33.333 0.00 0.00 31.20 2.59
3625 3798 8.776376 AATTTTATGTCCACAATAAAAGCCTG 57.224 30.769 7.25 0.00 34.51 4.85
3719 3893 9.902684 AGATACATGTTGAGATTCAGAGAAATT 57.097 29.630 2.30 0.00 0.00 1.82
3720 3894 9.902684 AAGATACATGTTGAGATTCAGAGAAAT 57.097 29.630 2.30 0.00 0.00 2.17
3721 3895 9.159364 CAAGATACATGTTGAGATTCAGAGAAA 57.841 33.333 2.30 0.00 33.31 2.52
3740 3914 4.773323 AAAGGTTCTGCAAGCAAGATAC 57.227 40.909 0.00 0.00 31.93 2.24
3792 3966 0.101759 CGTCCCATGATAACGTCCGT 59.898 55.000 0.00 0.00 0.00 4.69
3928 4105 4.090057 GGCGAAGACGTTGCTGGC 62.090 66.667 0.45 0.00 41.98 4.85
4283 4463 3.260100 CAGACCACCCCCTGCCTT 61.260 66.667 0.00 0.00 0.00 4.35
4284 4464 4.270153 TCAGACCACCCCCTGCCT 62.270 66.667 0.00 0.00 0.00 4.75
4299 4479 1.444672 CTCCATCCGCAGCATCTCA 59.555 57.895 0.00 0.00 0.00 3.27
4312 4492 0.537188 GTCATGTCGTCCACCTCCAT 59.463 55.000 0.00 0.00 0.00 3.41
4396 4576 4.223800 GAGCATCCATCAACGGCA 57.776 55.556 0.00 0.00 0.00 5.69
4502 4695 1.143684 ACACACACAAGGAGCCAAGAT 59.856 47.619 0.00 0.00 0.00 2.40
4503 4696 0.546122 ACACACACAAGGAGCCAAGA 59.454 50.000 0.00 0.00 0.00 3.02
4504 4697 0.664761 CACACACACAAGGAGCCAAG 59.335 55.000 0.00 0.00 0.00 3.61
4505 4698 0.034574 ACACACACACAAGGAGCCAA 60.035 50.000 0.00 0.00 0.00 4.52
4531 4724 3.245803 ACAGGACAGTCAAGAGGGACTAT 60.246 47.826 2.17 0.00 46.05 2.12
4647 4853 7.223582 ACTCATTCACTCATTCGTATCATTCAC 59.776 37.037 0.00 0.00 0.00 3.18
4687 4893 2.440247 CCCGTGGCCAAGGATTCC 60.440 66.667 36.13 8.31 31.21 3.01
4703 4909 8.141268 TCTTTACACAAAAAGATGATTCCAACC 58.859 33.333 0.00 0.00 39.86 3.77
4709 4915 9.956720 CTCTTGTCTTTACACAAAAAGATGATT 57.043 29.630 2.67 0.00 44.84 2.57
4732 4938 1.686052 CTAGCGCCTCCATTTCTCTCT 59.314 52.381 2.29 0.00 0.00 3.10
4790 4996 4.769345 AGCCCATCTTTCTTTCTCTAGG 57.231 45.455 0.00 0.00 0.00 3.02
4792 4998 7.345653 TGAGATAAGCCCATCTTTCTTTCTCTA 59.654 37.037 0.00 0.00 35.37 2.43
4793 4999 6.157645 TGAGATAAGCCCATCTTTCTTTCTCT 59.842 38.462 0.00 0.00 35.37 3.10
4795 5001 6.069731 AGTGAGATAAGCCCATCTTTCTTTCT 60.070 38.462 0.00 0.00 35.37 2.52
4796 5002 6.118852 AGTGAGATAAGCCCATCTTTCTTTC 58.881 40.000 0.00 0.00 35.37 2.62
4797 5003 6.072199 AGTGAGATAAGCCCATCTTTCTTT 57.928 37.500 0.00 0.00 35.37 2.52
4798 5004 5.707066 AGTGAGATAAGCCCATCTTTCTT 57.293 39.130 0.00 0.00 35.37 2.52
4815 5021 4.744795 AATACACTTGGGAGCTAGTGAG 57.255 45.455 18.92 3.61 43.45 3.51
4831 5038 3.118261 AGGACGACGGAGGTAGTAATACA 60.118 47.826 2.37 0.00 31.76 2.29
4832 5039 3.249559 CAGGACGACGGAGGTAGTAATAC 59.750 52.174 0.00 0.00 31.76 1.89
4833 5040 3.470709 CAGGACGACGGAGGTAGTAATA 58.529 50.000 0.00 0.00 31.76 0.98
4834 5041 2.295885 CAGGACGACGGAGGTAGTAAT 58.704 52.381 0.00 0.00 31.76 1.89
4835 5042 1.679944 CCAGGACGACGGAGGTAGTAA 60.680 57.143 0.00 0.00 31.76 2.24
4836 5043 0.107508 CCAGGACGACGGAGGTAGTA 60.108 60.000 0.00 0.00 31.76 1.82
4837 5044 1.378250 CCAGGACGACGGAGGTAGT 60.378 63.158 0.00 0.00 34.50 2.73
4838 5045 0.964358 AACCAGGACGACGGAGGTAG 60.964 60.000 0.00 0.00 31.10 3.18
4839 5046 0.540365 AAACCAGGACGACGGAGGTA 60.540 55.000 0.00 0.00 31.10 3.08
4840 5047 0.540365 TAAACCAGGACGACGGAGGT 60.540 55.000 0.00 0.00 0.00 3.85
4841 5048 0.822164 ATAAACCAGGACGACGGAGG 59.178 55.000 0.00 0.00 0.00 4.30
4842 5049 3.788333 TTATAAACCAGGACGACGGAG 57.212 47.619 0.00 0.00 0.00 4.63
4843 5050 4.741321 ATTTATAAACCAGGACGACGGA 57.259 40.909 0.00 0.00 0.00 4.69
4844 5051 4.746611 GGTATTTATAAACCAGGACGACGG 59.253 45.833 0.00 0.00 35.73 4.79
4845 5052 4.746611 GGGTATTTATAAACCAGGACGACG 59.253 45.833 0.00 0.00 37.51 5.12
4846 5053 5.673514 TGGGTATTTATAAACCAGGACGAC 58.326 41.667 0.00 0.00 37.51 4.34
4847 5054 5.954153 TGGGTATTTATAAACCAGGACGA 57.046 39.130 0.00 0.00 37.51 4.20
4848 5055 6.544564 ACAATGGGTATTTATAAACCAGGACG 59.455 38.462 10.70 3.77 37.51 4.79
4849 5056 7.891498 ACAATGGGTATTTATAAACCAGGAC 57.109 36.000 10.70 1.63 37.51 3.85
4863 5070 6.849085 TTCAGCACAAAATACAATGGGTAT 57.151 33.333 0.00 0.00 44.62 2.73
4864 5071 6.849085 ATTCAGCACAAAATACAATGGGTA 57.151 33.333 0.00 0.00 36.16 3.69
4865 5072 5.743636 ATTCAGCACAAAATACAATGGGT 57.256 34.783 0.00 0.00 0.00 4.51
4866 5073 7.172875 TCAAAATTCAGCACAAAATACAATGGG 59.827 33.333 0.00 0.00 0.00 4.00
4867 5074 8.011106 GTCAAAATTCAGCACAAAATACAATGG 58.989 33.333 0.00 0.00 0.00 3.16
4868 5075 8.767085 AGTCAAAATTCAGCACAAAATACAATG 58.233 29.630 0.00 0.00 0.00 2.82
4869 5076 8.891671 AGTCAAAATTCAGCACAAAATACAAT 57.108 26.923 0.00 0.00 0.00 2.71
4870 5077 9.462174 CTAGTCAAAATTCAGCACAAAATACAA 57.538 29.630 0.00 0.00 0.00 2.41
4871 5078 8.845227 TCTAGTCAAAATTCAGCACAAAATACA 58.155 29.630 0.00 0.00 0.00 2.29
4872 5079 9.334693 CTCTAGTCAAAATTCAGCACAAAATAC 57.665 33.333 0.00 0.00 0.00 1.89
4873 5080 9.283768 TCTCTAGTCAAAATTCAGCACAAAATA 57.716 29.630 0.00 0.00 0.00 1.40
4874 5081 8.169977 TCTCTAGTCAAAATTCAGCACAAAAT 57.830 30.769 0.00 0.00 0.00 1.82
4875 5082 7.566760 TCTCTAGTCAAAATTCAGCACAAAA 57.433 32.000 0.00 0.00 0.00 2.44
4876 5083 7.750229 ATCTCTAGTCAAAATTCAGCACAAA 57.250 32.000 0.00 0.00 0.00 2.83
4877 5084 7.750229 AATCTCTAGTCAAAATTCAGCACAA 57.250 32.000 0.00 0.00 0.00 3.33
4878 5085 7.750229 AAATCTCTAGTCAAAATTCAGCACA 57.250 32.000 0.00 0.00 0.00 4.57
4879 5086 9.548208 GTTAAATCTCTAGTCAAAATTCAGCAC 57.452 33.333 0.00 0.00 0.00 4.40
4880 5087 9.507329 AGTTAAATCTCTAGTCAAAATTCAGCA 57.493 29.630 0.00 0.00 0.00 4.41
4920 5127 9.715123 CAACGATATAATTTTTAGTGACATGCA 57.285 29.630 0.00 0.00 0.00 3.96
4921 5128 9.929722 TCAACGATATAATTTTTAGTGACATGC 57.070 29.630 0.00 0.00 0.00 4.06
5021 5228 9.804758 TTGTATTCCGTGTCAAATTTTAACTTT 57.195 25.926 0.00 0.00 0.00 2.66
5022 5229 9.804758 TTTGTATTCCGTGTCAAATTTTAACTT 57.195 25.926 0.00 0.00 0.00 2.66
5023 5230 9.458374 CTTTGTATTCCGTGTCAAATTTTAACT 57.542 29.630 0.00 0.00 31.08 2.24
5024 5231 8.696175 CCTTTGTATTCCGTGTCAAATTTTAAC 58.304 33.333 0.00 0.00 31.08 2.01
5025 5232 7.868415 CCCTTTGTATTCCGTGTCAAATTTTAA 59.132 33.333 0.00 0.00 31.08 1.52
5026 5233 7.371936 CCCTTTGTATTCCGTGTCAAATTTTA 58.628 34.615 0.00 0.00 31.08 1.52
5027 5234 6.220201 CCCTTTGTATTCCGTGTCAAATTTT 58.780 36.000 0.00 0.00 31.08 1.82
5028 5235 5.279256 CCCCTTTGTATTCCGTGTCAAATTT 60.279 40.000 0.00 0.00 31.08 1.82
5029 5236 4.219725 CCCCTTTGTATTCCGTGTCAAATT 59.780 41.667 0.00 0.00 31.08 1.82
5030 5237 3.761752 CCCCTTTGTATTCCGTGTCAAAT 59.238 43.478 0.00 0.00 31.08 2.32
5031 5238 3.150767 CCCCTTTGTATTCCGTGTCAAA 58.849 45.455 0.00 0.00 0.00 2.69
5032 5239 2.372504 TCCCCTTTGTATTCCGTGTCAA 59.627 45.455 0.00 0.00 0.00 3.18
5033 5240 1.979308 TCCCCTTTGTATTCCGTGTCA 59.021 47.619 0.00 0.00 0.00 3.58
5034 5241 2.027469 AGTCCCCTTTGTATTCCGTGTC 60.027 50.000 0.00 0.00 0.00 3.67
5035 5242 1.982958 AGTCCCCTTTGTATTCCGTGT 59.017 47.619 0.00 0.00 0.00 4.49
5036 5243 2.781681 AGTCCCCTTTGTATTCCGTG 57.218 50.000 0.00 0.00 0.00 4.94
5037 5244 3.447950 ACTAGTCCCCTTTGTATTCCGT 58.552 45.455 0.00 0.00 0.00 4.69
5038 5245 5.603170 TTACTAGTCCCCTTTGTATTCCG 57.397 43.478 0.00 0.00 0.00 4.30
5039 5246 6.118170 GGTTTACTAGTCCCCTTTGTATTCC 58.882 44.000 0.00 0.00 0.00 3.01
5040 5247 6.714278 TGGTTTACTAGTCCCCTTTGTATTC 58.286 40.000 0.00 0.00 0.00 1.75
5041 5248 6.296836 CCTGGTTTACTAGTCCCCTTTGTATT 60.297 42.308 0.00 0.00 0.00 1.89
5042 5249 5.191124 CCTGGTTTACTAGTCCCCTTTGTAT 59.809 44.000 0.00 0.00 0.00 2.29
5043 5250 4.533311 CCTGGTTTACTAGTCCCCTTTGTA 59.467 45.833 0.00 0.00 0.00 2.41
5044 5251 3.329814 CCTGGTTTACTAGTCCCCTTTGT 59.670 47.826 0.00 0.00 0.00 2.83
5045 5252 3.585732 TCCTGGTTTACTAGTCCCCTTTG 59.414 47.826 0.00 0.00 0.00 2.77
5046 5253 3.844804 CTCCTGGTTTACTAGTCCCCTTT 59.155 47.826 0.00 0.00 0.00 3.11
5047 5254 3.181398 ACTCCTGGTTTACTAGTCCCCTT 60.181 47.826 0.00 0.00 0.00 3.95
5048 5255 2.386113 ACTCCTGGTTTACTAGTCCCCT 59.614 50.000 0.00 0.00 0.00 4.79
5049 5256 2.765135 GACTCCTGGTTTACTAGTCCCC 59.235 54.545 0.00 0.00 32.27 4.81
5050 5257 2.765135 GGACTCCTGGTTTACTAGTCCC 59.235 54.545 15.66 0.00 46.95 4.46
5052 5259 3.447944 CCTGGACTCCTGGTTTACTAGTC 59.552 52.174 12.05 3.11 37.76 2.59
5053 5260 3.077088 TCCTGGACTCCTGGTTTACTAGT 59.923 47.826 18.16 0.00 42.31 2.57
5054 5261 3.447944 GTCCTGGACTCCTGGTTTACTAG 59.552 52.174 19.53 0.00 42.31 2.57
5055 5262 3.438183 GTCCTGGACTCCTGGTTTACTA 58.562 50.000 19.53 0.00 42.31 1.82
5056 5263 2.258109 GTCCTGGACTCCTGGTTTACT 58.742 52.381 19.53 0.00 42.31 2.24
5057 5264 1.067071 CGTCCTGGACTCCTGGTTTAC 60.067 57.143 23.49 10.04 42.31 2.01
5058 5265 1.263356 CGTCCTGGACTCCTGGTTTA 58.737 55.000 23.49 0.00 42.31 2.01
5059 5266 1.481056 CCGTCCTGGACTCCTGGTTT 61.481 60.000 23.49 0.00 42.31 3.27
5060 5267 1.913762 CCGTCCTGGACTCCTGGTT 60.914 63.158 23.49 0.00 42.31 3.67
5061 5268 2.283966 CCGTCCTGGACTCCTGGT 60.284 66.667 23.49 0.00 42.31 4.00
5062 5269 2.037367 TCCGTCCTGGACTCCTGG 59.963 66.667 23.49 16.94 43.74 4.45
5063 5270 2.055042 CCTCCGTCCTGGACTCCTG 61.055 68.421 23.49 8.69 43.74 3.86
5064 5271 1.212934 TACCTCCGTCCTGGACTCCT 61.213 60.000 23.49 5.18 43.74 3.69
5065 5272 0.752376 CTACCTCCGTCCTGGACTCC 60.752 65.000 23.49 0.00 43.74 3.85
5066 5273 0.034283 ACTACCTCCGTCCTGGACTC 60.034 60.000 23.49 0.00 43.74 3.36
5067 5274 1.293062 TACTACCTCCGTCCTGGACT 58.707 55.000 23.49 7.93 43.74 3.85
5068 5275 2.361643 ATACTACCTCCGTCCTGGAC 57.638 55.000 16.99 16.99 43.74 4.02
5069 5276 5.677621 AGTGTATACTACCTCCGTCCTGGA 61.678 50.000 4.17 0.00 39.07 3.86
5070 5277 2.883386 GTGTATACTACCTCCGTCCTGG 59.117 54.545 4.17 0.00 40.09 4.45
5071 5278 3.818180 AGTGTATACTACCTCCGTCCTG 58.182 50.000 4.17 0.00 34.74 3.86
5072 5279 5.455899 CCTTAGTGTATACTACCTCCGTCCT 60.456 48.000 4.17 0.00 39.06 3.85
5073 5280 4.759183 CCTTAGTGTATACTACCTCCGTCC 59.241 50.000 4.17 0.00 39.06 4.79
5074 5281 4.215185 GCCTTAGTGTATACTACCTCCGTC 59.785 50.000 4.17 0.00 39.06 4.79
5075 5282 4.140536 GCCTTAGTGTATACTACCTCCGT 58.859 47.826 4.17 0.00 39.06 4.69
5076 5283 3.505293 GGCCTTAGTGTATACTACCTCCG 59.495 52.174 4.17 0.00 39.06 4.63
5077 5284 3.831333 GGGCCTTAGTGTATACTACCTCC 59.169 52.174 0.84 1.17 39.06 4.30
5078 5285 4.523558 CAGGGCCTTAGTGTATACTACCTC 59.476 50.000 1.32 0.00 39.06 3.85
5079 5286 4.078747 ACAGGGCCTTAGTGTATACTACCT 60.079 45.833 1.32 0.23 39.06 3.08
5080 5287 4.221530 ACAGGGCCTTAGTGTATACTACC 58.778 47.826 1.32 0.00 39.06 3.18
5081 5288 5.866159 AACAGGGCCTTAGTGTATACTAC 57.134 43.478 1.32 1.23 39.06 2.73
5082 5289 5.722923 ACAAACAGGGCCTTAGTGTATACTA 59.277 40.000 1.32 0.00 38.36 1.82
5083 5290 4.534897 ACAAACAGGGCCTTAGTGTATACT 59.465 41.667 1.32 0.00 40.99 2.12
5084 5291 4.840271 ACAAACAGGGCCTTAGTGTATAC 58.160 43.478 1.32 0.00 0.00 1.47
5085 5292 5.508280 AACAAACAGGGCCTTAGTGTATA 57.492 39.130 1.32 0.00 0.00 1.47
5086 5293 4.382386 AACAAACAGGGCCTTAGTGTAT 57.618 40.909 1.32 0.00 0.00 2.29
5087 5294 3.868619 AACAAACAGGGCCTTAGTGTA 57.131 42.857 1.32 0.00 0.00 2.90
5088 5295 2.748209 AACAAACAGGGCCTTAGTGT 57.252 45.000 1.32 4.96 0.00 3.55
5089 5296 2.955660 TGAAACAAACAGGGCCTTAGTG 59.044 45.455 1.32 4.21 0.00 2.74
5090 5297 3.306472 TGAAACAAACAGGGCCTTAGT 57.694 42.857 1.32 0.00 0.00 2.24
5091 5298 5.476945 ACTTATGAAACAAACAGGGCCTTAG 59.523 40.000 1.32 0.00 0.00 2.18
5092 5299 5.390387 ACTTATGAAACAAACAGGGCCTTA 58.610 37.500 1.32 0.00 0.00 2.69
5093 5300 4.223144 ACTTATGAAACAAACAGGGCCTT 58.777 39.130 1.32 0.00 0.00 4.35
5094 5301 3.826729 GACTTATGAAACAAACAGGGCCT 59.173 43.478 0.00 0.00 0.00 5.19
5095 5302 3.056821 GGACTTATGAAACAAACAGGGCC 60.057 47.826 0.00 0.00 0.00 5.80
5096 5303 3.826729 AGGACTTATGAAACAAACAGGGC 59.173 43.478 0.00 0.00 0.00 5.19
5097 5304 6.472887 TCTAGGACTTATGAAACAAACAGGG 58.527 40.000 0.00 0.00 0.00 4.45
5098 5305 7.661847 AGTTCTAGGACTTATGAAACAAACAGG 59.338 37.037 0.00 0.00 0.00 4.00
5099 5306 8.608844 AGTTCTAGGACTTATGAAACAAACAG 57.391 34.615 0.00 0.00 0.00 3.16
5100 5307 8.974060 AAGTTCTAGGACTTATGAAACAAACA 57.026 30.769 15.17 0.00 38.06 2.83
5131 5338 7.387643 GGACTTCTGACTTATAAGTTTGGACT 58.612 38.462 18.96 2.11 39.88 3.85
5132 5339 6.594547 GGGACTTCTGACTTATAAGTTTGGAC 59.405 42.308 18.96 6.91 39.88 4.02
5133 5340 6.500751 AGGGACTTCTGACTTATAAGTTTGGA 59.499 38.462 18.96 13.75 34.84 3.53
5134 5341 6.712276 AGGGACTTCTGACTTATAAGTTTGG 58.288 40.000 18.96 11.92 34.84 3.28
5135 5342 7.764901 GGTAGGGACTTCTGACTTATAAGTTTG 59.235 40.741 18.96 14.15 38.78 2.93
5136 5343 7.679025 AGGTAGGGACTTCTGACTTATAAGTTT 59.321 37.037 18.96 0.00 38.78 2.66
5137 5344 7.124448 CAGGTAGGGACTTCTGACTTATAAGTT 59.876 40.741 18.96 2.29 39.61 2.66
5138 5345 6.608002 CAGGTAGGGACTTCTGACTTATAAGT 59.392 42.308 18.05 18.05 39.61 2.24
5139 5346 6.608002 ACAGGTAGGGACTTCTGACTTATAAG 59.392 42.308 11.05 11.05 39.61 1.73
5140 5347 6.500336 ACAGGTAGGGACTTCTGACTTATAA 58.500 40.000 0.00 0.00 39.61 0.98
5141 5348 6.088541 ACAGGTAGGGACTTCTGACTTATA 57.911 41.667 0.00 0.00 39.61 0.98
5142 5349 4.949121 ACAGGTAGGGACTTCTGACTTAT 58.051 43.478 0.00 0.00 39.61 1.73
5143 5350 4.399483 ACAGGTAGGGACTTCTGACTTA 57.601 45.455 0.00 0.00 39.61 2.24
5144 5351 3.261818 ACAGGTAGGGACTTCTGACTT 57.738 47.619 0.00 0.00 39.61 3.01
5145 5352 3.261818 AACAGGTAGGGACTTCTGACT 57.738 47.619 0.00 0.00 39.61 3.41
5146 5353 3.071167 ACAAACAGGTAGGGACTTCTGAC 59.929 47.826 0.00 0.00 39.61 3.51
5147 5354 3.314693 ACAAACAGGTAGGGACTTCTGA 58.685 45.455 0.00 0.00 39.61 3.27
5148 5355 3.771577 ACAAACAGGTAGGGACTTCTG 57.228 47.619 0.00 0.00 41.75 3.02
5149 5356 4.790718 AAACAAACAGGTAGGGACTTCT 57.209 40.909 0.00 0.00 41.75 2.85
5150 5357 5.370679 TGTAAACAAACAGGTAGGGACTTC 58.629 41.667 0.00 0.00 41.75 3.01
5151 5358 5.131475 TCTGTAAACAAACAGGTAGGGACTT 59.869 40.000 4.32 0.00 45.69 3.01
5152 5359 4.657039 TCTGTAAACAAACAGGTAGGGACT 59.343 41.667 4.32 0.00 45.69 3.85
5153 5360 4.964593 TCTGTAAACAAACAGGTAGGGAC 58.035 43.478 4.32 0.00 45.69 4.46
5154 5361 4.903049 TCTCTGTAAACAAACAGGTAGGGA 59.097 41.667 4.32 0.00 45.69 4.20
5155 5362 4.995487 GTCTCTGTAAACAAACAGGTAGGG 59.005 45.833 4.32 0.00 45.69 3.53
5156 5363 5.855045 AGTCTCTGTAAACAAACAGGTAGG 58.145 41.667 4.32 0.00 45.69 3.18
5159 5366 9.490379 CTTATAAGTCTCTGTAAACAAACAGGT 57.510 33.333 4.18 0.00 45.69 4.00
5160 5367 9.490379 ACTTATAAGTCTCTGTAAACAAACAGG 57.510 33.333 12.50 0.00 40.25 4.00
5172 5379 9.534257 TAGGGACTCGGGACTTATAAGTCTCTG 62.534 48.148 32.66 27.64 46.54 3.35
5173 5380 7.609569 TAGGGACTCGGGACTTATAAGTCTCT 61.610 46.154 32.66 20.39 46.54 3.10
5174 5381 5.455899 TAGGGACTCGGGACTTATAAGTCTC 60.456 48.000 33.70 31.31 46.90 3.36
5175 5382 4.414846 TAGGGACTCGGGACTTATAAGTCT 59.585 45.833 33.70 20.34 46.90 3.24
5176 5383 4.518590 GTAGGGACTCGGGACTTATAAGTC 59.481 50.000 29.84 29.84 46.96 3.01
5177 5384 3.684408 AGGGACTCGGGACTTATAAGT 57.316 47.619 18.05 18.05 43.16 2.24
5178 5385 3.825585 GGTAGGGACTCGGGACTTATAAG 59.174 52.174 11.05 11.05 41.75 1.73
5179 5386 3.464833 AGGTAGGGACTCGGGACTTATAA 59.535 47.826 0.00 0.00 41.75 0.98
5180 5387 3.059097 AGGTAGGGACTCGGGACTTATA 58.941 50.000 0.00 0.00 41.75 0.98
5181 5388 1.858246 AGGTAGGGACTCGGGACTTAT 59.142 52.381 0.00 0.00 41.75 1.73
5182 5389 1.064166 CAGGTAGGGACTCGGGACTTA 60.064 57.143 0.00 0.00 41.75 2.24
5183 5390 0.324460 CAGGTAGGGACTCGGGACTT 60.324 60.000 0.00 0.00 41.75 3.01
5184 5391 1.306970 CAGGTAGGGACTCGGGACT 59.693 63.158 0.00 0.00 41.75 3.85
5185 5392 0.614134 AACAGGTAGGGACTCGGGAC 60.614 60.000 0.00 0.00 41.75 4.46
5186 5393 0.115745 AAACAGGTAGGGACTCGGGA 59.884 55.000 0.00 0.00 41.75 5.14
5187 5394 0.249398 CAAACAGGTAGGGACTCGGG 59.751 60.000 0.00 0.00 41.75 5.14
5188 5395 0.974383 ACAAACAGGTAGGGACTCGG 59.026 55.000 0.00 0.00 41.75 4.63
5189 5396 2.833631 AACAAACAGGTAGGGACTCG 57.166 50.000 0.00 0.00 41.75 4.18
5190 5397 4.964593 TGTAAACAAACAGGTAGGGACTC 58.035 43.478 0.00 0.00 41.75 3.36
5191 5398 4.969484 CTGTAAACAAACAGGTAGGGACT 58.031 43.478 0.00 0.00 42.63 3.85
5200 5407 8.617290 ACTTATAAGTCCCTGTAAACAAACAG 57.383 34.615 12.50 0.00 39.86 3.16
5215 5422 4.034048 CGGTGCAACATGGACTTATAAGTC 59.966 45.833 29.84 29.84 46.83 3.01
5216 5423 3.938963 CGGTGCAACATGGACTTATAAGT 59.061 43.478 18.05 18.05 38.83 2.24
5217 5424 3.242739 GCGGTGCAACATGGACTTATAAG 60.243 47.826 11.05 11.05 38.83 1.73
5218 5425 2.680841 GCGGTGCAACATGGACTTATAA 59.319 45.455 0.98 0.00 38.83 0.98
5219 5426 2.093181 AGCGGTGCAACATGGACTTATA 60.093 45.455 0.98 0.00 38.83 0.98
5220 5427 1.094785 GCGGTGCAACATGGACTTAT 58.905 50.000 0.98 0.00 38.83 1.73
5221 5428 0.036164 AGCGGTGCAACATGGACTTA 59.964 50.000 0.98 0.00 38.83 2.24
5222 5429 1.228245 AGCGGTGCAACATGGACTT 60.228 52.632 0.98 0.00 38.83 3.01
5223 5430 1.968017 CAGCGGTGCAACATGGACT 60.968 57.895 0.98 0.00 38.83 3.85
5224 5431 2.562912 CAGCGGTGCAACATGGAC 59.437 61.111 0.98 0.00 39.98 4.02
5237 5444 3.485431 CTGAGCCTCGTTGCAGCG 61.485 66.667 17.58 17.58 0.00 5.18
5238 5445 3.123620 CCTGAGCCTCGTTGCAGC 61.124 66.667 0.00 0.00 0.00 5.25
5239 5446 1.447489 CTCCTGAGCCTCGTTGCAG 60.447 63.158 2.08 0.00 0.00 4.41
5240 5447 1.881903 CTCTCCTGAGCCTCGTTGCA 61.882 60.000 2.08 0.00 33.12 4.08
5241 5448 1.153667 CTCTCCTGAGCCTCGTTGC 60.154 63.158 0.00 0.00 33.12 4.17
5242 5449 1.515020 CCTCTCCTGAGCCTCGTTG 59.485 63.158 0.00 0.00 38.93 4.10
5243 5450 1.684049 CCCTCTCCTGAGCCTCGTT 60.684 63.158 0.00 0.00 38.93 3.85
5244 5451 2.043450 CCCTCTCCTGAGCCTCGT 60.043 66.667 0.00 0.00 38.93 4.18
5245 5452 3.535962 GCCCTCTCCTGAGCCTCG 61.536 72.222 0.00 0.00 38.93 4.63
5246 5453 1.688884 AAGCCCTCTCCTGAGCCTC 60.689 63.158 0.00 0.00 38.93 4.70
5247 5454 1.994507 CAAGCCCTCTCCTGAGCCT 60.995 63.158 0.00 0.00 38.93 4.58
5248 5455 2.250741 GACAAGCCCTCTCCTGAGCC 62.251 65.000 0.00 0.00 38.93 4.70
5249 5456 1.220477 GACAAGCCCTCTCCTGAGC 59.780 63.158 0.00 0.00 38.93 4.26
5250 5457 1.904032 GGACAAGCCCTCTCCTGAG 59.096 63.158 0.00 0.00 39.92 3.35
5251 5458 1.984570 CGGACAAGCCCTCTCCTGA 60.985 63.158 0.00 0.00 0.00 3.86
5252 5459 2.581354 CGGACAAGCCCTCTCCTG 59.419 66.667 0.00 0.00 0.00 3.86
5253 5460 2.685380 CCGGACAAGCCCTCTCCT 60.685 66.667 0.00 0.00 0.00 3.69
5254 5461 4.475135 GCCGGACAAGCCCTCTCC 62.475 72.222 5.05 0.00 0.00 3.71
5255 5462 4.821589 CGCCGGACAAGCCCTCTC 62.822 72.222 5.05 0.00 0.00 3.20
5257 5464 3.682292 AATCGCCGGACAAGCCCTC 62.682 63.158 5.05 0.00 0.00 4.30
5258 5465 3.717294 AATCGCCGGACAAGCCCT 61.717 61.111 5.05 0.00 0.00 5.19
5259 5466 3.508840 CAATCGCCGGACAAGCCC 61.509 66.667 5.05 0.00 0.00 5.19
5260 5467 3.508840 CCAATCGCCGGACAAGCC 61.509 66.667 5.05 0.00 0.00 4.35
5261 5468 2.435938 TCCAATCGCCGGACAAGC 60.436 61.111 5.05 0.00 0.00 4.01
5262 5469 1.815421 CCTCCAATCGCCGGACAAG 60.815 63.158 5.05 0.00 0.00 3.16
5263 5470 2.267642 CCTCCAATCGCCGGACAA 59.732 61.111 5.05 0.00 0.00 3.18
5264 5471 4.467084 GCCTCCAATCGCCGGACA 62.467 66.667 5.05 0.00 0.00 4.02
5265 5472 4.467084 TGCCTCCAATCGCCGGAC 62.467 66.667 5.05 0.00 0.00 4.79
5266 5473 4.467084 GTGCCTCCAATCGCCGGA 62.467 66.667 5.05 0.00 0.00 5.14
5271 5478 3.197790 CAGCGGTGCCTCCAATCG 61.198 66.667 0.00 0.00 35.57 3.34
5272 5479 3.512516 GCAGCGGTGCCTCCAATC 61.513 66.667 28.58 0.00 44.72 2.67
5281 5488 4.368808 CGGTTCGTTGCAGCGGTG 62.369 66.667 22.99 10.98 0.00 4.94
5282 5489 4.595538 TCGGTTCGTTGCAGCGGT 62.596 61.111 22.99 0.00 35.83 5.68
5283 5490 3.777925 CTCGGTTCGTTGCAGCGG 61.778 66.667 22.99 6.85 35.83 5.52
5284 5491 3.777925 CCTCGGTTCGTTGCAGCG 61.778 66.667 17.58 17.58 36.47 5.18
5285 5492 4.090057 GCCTCGGTTCGTTGCAGC 62.090 66.667 0.00 0.00 0.00 5.25
5286 5493 2.664851 TGCCTCGGTTCGTTGCAG 60.665 61.111 0.00 0.00 32.97 4.41
5287 5494 2.652382 TTCTGCCTCGGTTCGTTGCA 62.652 55.000 0.00 0.00 34.71 4.08
5288 5495 1.959226 TTCTGCCTCGGTTCGTTGC 60.959 57.895 0.00 0.00 0.00 4.17
5289 5496 1.860078 GTTCTGCCTCGGTTCGTTG 59.140 57.895 0.00 0.00 0.00 4.10
5290 5497 1.663702 CGTTCTGCCTCGGTTCGTT 60.664 57.895 0.00 0.00 0.00 3.85
5291 5498 2.049433 CGTTCTGCCTCGGTTCGT 60.049 61.111 0.00 0.00 0.00 3.85
5292 5499 1.372499 TTCGTTCTGCCTCGGTTCG 60.372 57.895 0.00 0.00 0.00 3.95
5293 5500 1.289800 GGTTCGTTCTGCCTCGGTTC 61.290 60.000 0.00 0.00 0.00 3.62
5294 5501 1.301479 GGTTCGTTCTGCCTCGGTT 60.301 57.895 0.00 0.00 0.00 4.44
5295 5502 2.342648 GGTTCGTTCTGCCTCGGT 59.657 61.111 0.00 0.00 0.00 4.69
5296 5503 2.809601 CGGTTCGTTCTGCCTCGG 60.810 66.667 0.00 0.00 0.00 4.63
5297 5504 1.801913 CTCGGTTCGTTCTGCCTCG 60.802 63.158 0.00 0.00 0.00 4.63
5298 5505 1.446272 CCTCGGTTCGTTCTGCCTC 60.446 63.158 0.00 0.00 0.00 4.70
5299 5506 2.657237 CCTCGGTTCGTTCTGCCT 59.343 61.111 0.00 0.00 0.00 4.75
5300 5507 3.119096 GCCTCGGTTCGTTCTGCC 61.119 66.667 0.00 0.00 0.00 4.85
5301 5508 3.479269 CGCCTCGGTTCGTTCTGC 61.479 66.667 0.00 0.00 0.00 4.26
5302 5509 2.809601 CCGCCTCGGTTCGTTCTG 60.810 66.667 0.00 0.00 42.73 3.02
5303 5510 4.065281 CCCGCCTCGGTTCGTTCT 62.065 66.667 4.47 0.00 46.80 3.01
5334 5541 3.119096 GTTCTGCCTCGGTTCGCC 61.119 66.667 0.00 0.00 0.00 5.54
5335 5542 3.479269 CGTTCTGCCTCGGTTCGC 61.479 66.667 0.00 0.00 0.00 4.70
5336 5543 1.372499 TTCGTTCTGCCTCGGTTCG 60.372 57.895 0.00 0.00 0.00 3.95
5337 5544 1.289800 GGTTCGTTCTGCCTCGGTTC 61.290 60.000 0.00 0.00 0.00 3.62
5338 5545 1.301479 GGTTCGTTCTGCCTCGGTT 60.301 57.895 0.00 0.00 0.00 4.44
5339 5546 2.342648 GGTTCGTTCTGCCTCGGT 59.657 61.111 0.00 0.00 0.00 4.69
5340 5547 2.809601 CGGTTCGTTCTGCCTCGG 60.810 66.667 0.00 0.00 0.00 4.63
5341 5548 1.801913 CTCGGTTCGTTCTGCCTCG 60.802 63.158 0.00 0.00 0.00 4.63
5342 5549 1.446272 CCTCGGTTCGTTCTGCCTC 60.446 63.158 0.00 0.00 0.00 4.70
5343 5550 2.657237 CCTCGGTTCGTTCTGCCT 59.343 61.111 0.00 0.00 0.00 4.75
5344 5551 3.119096 GCCTCGGTTCGTTCTGCC 61.119 66.667 0.00 0.00 0.00 4.85
5345 5552 3.479269 CGCCTCGGTTCGTTCTGC 61.479 66.667 0.00 0.00 0.00 4.26
5346 5553 2.809601 CCGCCTCGGTTCGTTCTG 60.810 66.667 0.00 0.00 42.73 3.02
5347 5554 4.065281 CCCGCCTCGGTTCGTTCT 62.065 66.667 4.47 0.00 46.80 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.