Multiple sequence alignment - TraesCS4B01G305300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G305300 chr4B 100.000 3441 0 0 1 3441 593421292 593424732 0.000000e+00 6355.0
1 TraesCS4B01G305300 chr4B 96.939 196 6 0 3111 3306 593424353 593424548 2.560000e-86 329.0
2 TraesCS4B01G305300 chr4B 96.939 196 6 0 3062 3257 593424402 593424597 2.560000e-86 329.0
3 TraesCS4B01G305300 chr4B 97.959 147 3 0 3160 3306 593424353 593424499 4.410000e-64 255.0
4 TraesCS4B01G305300 chr4B 97.959 147 3 0 3062 3208 593424451 593424597 4.410000e-64 255.0
5 TraesCS4B01G305300 chr4B 96.939 98 3 0 3209 3306 593424353 593424450 7.640000e-37 165.0
6 TraesCS4B01G305300 chr4B 96.939 98 3 0 3062 3159 593424500 593424597 7.640000e-37 165.0
7 TraesCS4B01G305300 chr4B 100.000 49 0 0 3258 3306 593424353 593424401 1.320000e-14 91.6
8 TraesCS4B01G305300 chr4B 100.000 49 0 0 3062 3110 593424549 593424597 1.320000e-14 91.6
9 TraesCS4B01G305300 chr4D 92.526 2395 77 33 500 2859 471960620 471962947 0.000000e+00 3338.0
10 TraesCS4B01G305300 chr4D 90.650 246 13 4 1 242 471960383 471960622 5.540000e-83 318.0
11 TraesCS4B01G305300 chr4D 88.936 235 25 1 240 474 37612071 37612304 4.340000e-74 289.0
12 TraesCS4B01G305300 chr4D 93.548 186 12 0 3256 3441 471963150 471963335 9.410000e-71 278.0
13 TraesCS4B01G305300 chr4D 83.246 191 27 3 1568 1754 457075092 457075281 1.640000e-38 171.0
14 TraesCS4B01G305300 chr4D 91.837 49 3 1 2978 3025 471962984 471963032 2.220000e-07 67.6
15 TraesCS4B01G305300 chr4A 92.576 1832 82 24 1324 3110 678872139 678873961 0.000000e+00 2580.0
16 TraesCS4B01G305300 chr4A 87.105 791 44 14 504 1285 678871401 678872142 0.000000e+00 843.0
17 TraesCS4B01G305300 chr4A 94.086 186 11 0 3256 3441 678873911 678874096 2.020000e-72 283.0
18 TraesCS4B01G305300 chr4A 83.041 171 13 8 11 177 678870936 678871094 1.290000e-29 141.0
19 TraesCS4B01G305300 chr4A 98.039 51 1 0 3158 3208 678873911 678873961 4.730000e-14 89.8
20 TraesCS4B01G305300 chr4A 94.444 36 0 2 32 67 578105922 578105889 2.000000e-03 54.7
21 TraesCS4B01G305300 chr5A 87.868 272 27 5 1578 1846 463452312 463452580 7.170000e-82 315.0
22 TraesCS4B01G305300 chr2B 90.213 235 23 0 240 474 485763314 485763548 1.200000e-79 307.0
23 TraesCS4B01G305300 chr2B 85.130 269 35 4 238 501 772490724 772490456 1.570000e-68 270.0
24 TraesCS4B01G305300 chr7A 89.113 248 22 2 240 482 50002969 50002722 1.550000e-78 303.0
25 TraesCS4B01G305300 chr5B 87.085 271 31 4 1578 1846 428461851 428462119 1.550000e-78 303.0
26 TraesCS4B01G305300 chr5D 86.716 271 32 4 1578 1846 362548004 362548272 7.220000e-77 298.0
27 TraesCS4B01G305300 chr5D 87.259 259 26 4 228 482 433533390 433533645 4.340000e-74 289.0
28 TraesCS4B01G305300 chr5D 87.600 250 26 2 237 482 431879553 431879305 5.620000e-73 285.0
29 TraesCS4B01G305300 chr6A 88.983 236 23 3 240 474 151663173 151663406 4.340000e-74 289.0
30 TraesCS4B01G305300 chr6A 81.019 216 35 5 1613 1825 522227015 522226803 2.120000e-37 167.0
31 TraesCS4B01G305300 chrUn 88.285 239 26 2 238 474 353135891 353135653 5.620000e-73 285.0
32 TraesCS4B01G305300 chrUn 88.285 239 26 2 238 474 406546970 406546732 5.620000e-73 285.0
33 TraesCS4B01G305300 chr6B 81.481 216 34 5 1613 1825 568258599 568258387 4.570000e-39 172.0
34 TraesCS4B01G305300 chr6D 80.093 216 37 5 1613 1825 380800280 380800068 4.600000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G305300 chr4B 593421292 593424732 3440 False 892.911111 6355 98.18600 1 3441 9 chr4B.!!$F1 3440
1 TraesCS4B01G305300 chr4D 471960383 471963335 2952 False 1000.400000 3338 92.14025 1 3441 4 chr4D.!!$F3 3440
2 TraesCS4B01G305300 chr4A 678870936 678874096 3160 False 787.360000 2580 90.96940 11 3441 5 chr4A.!!$F1 3430

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
283 530 0.105593 AGCTGGTATCATGCACTCGG 59.894 55.0 0.0 0.0 0.00 4.63 F
1057 1315 0.107456 ATCGCCAGAGCCAGGTATTG 59.893 55.0 0.0 0.0 34.57 1.90 F
1295 1558 0.031857 CCTGCTCACTCTATGCTCCG 59.968 60.0 0.0 0.0 0.00 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1178 1436 0.377203 GGCACATACTTTGCGCTACC 59.623 55.0 9.73 0.00 41.18 3.18 R
1871 2150 0.579630 CACGCGTGTCAAACAGCTAA 59.420 50.0 30.50 0.00 0.00 3.09 R
3237 3651 0.319469 ATGCGGCCTTTTCAAAACCG 60.319 50.0 7.41 7.41 46.50 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 4.566545 TGAGTTTGTTTGATTGCATCGT 57.433 36.364 0.00 0.00 0.00 3.73
71 72 5.938322 TGCATCGTAGGAAAACAAAGAATC 58.062 37.500 0.00 0.00 0.00 2.52
172 180 3.879295 ACGAATCAAGCCATCAACATAGG 59.121 43.478 0.00 0.00 0.00 2.57
234 481 2.655001 GCTGCGGTTTTATTTCGTTGTC 59.345 45.455 0.00 0.00 0.00 3.18
239 486 5.008415 TGCGGTTTTATTTCGTTGTCCTTTA 59.992 36.000 0.00 0.00 0.00 1.85
240 487 5.566395 GCGGTTTTATTTCGTTGTCCTTTAG 59.434 40.000 0.00 0.00 0.00 1.85
241 488 6.081693 CGGTTTTATTTCGTTGTCCTTTAGG 58.918 40.000 0.00 0.00 0.00 2.69
242 489 6.293571 CGGTTTTATTTCGTTGTCCTTTAGGT 60.294 38.462 0.00 0.00 36.34 3.08
243 490 7.428020 GGTTTTATTTCGTTGTCCTTTAGGTT 58.572 34.615 0.00 0.00 36.34 3.50
244 491 7.380333 GGTTTTATTTCGTTGTCCTTTAGGTTG 59.620 37.037 0.00 0.00 36.34 3.77
245 492 6.563222 TTATTTCGTTGTCCTTTAGGTTGG 57.437 37.500 0.00 0.00 36.34 3.77
246 493 1.886886 TCGTTGTCCTTTAGGTTGGC 58.113 50.000 0.00 0.00 36.34 4.52
247 494 0.879090 CGTTGTCCTTTAGGTTGGCC 59.121 55.000 0.00 0.00 36.34 5.36
248 495 1.816183 CGTTGTCCTTTAGGTTGGCCA 60.816 52.381 0.00 0.00 37.19 5.36
249 496 2.525368 GTTGTCCTTTAGGTTGGCCAT 58.475 47.619 6.09 0.00 37.19 4.40
250 497 3.692690 GTTGTCCTTTAGGTTGGCCATA 58.307 45.455 6.09 0.00 37.19 2.74
251 498 3.644966 TGTCCTTTAGGTTGGCCATAG 57.355 47.619 6.09 0.00 37.19 2.23
252 499 2.916934 TGTCCTTTAGGTTGGCCATAGT 59.083 45.455 6.09 0.00 37.19 2.12
253 500 3.279434 GTCCTTTAGGTTGGCCATAGTG 58.721 50.000 6.09 0.00 37.19 2.74
254 501 2.241176 TCCTTTAGGTTGGCCATAGTGG 59.759 50.000 6.09 3.17 37.22 4.00
255 502 2.654863 CTTTAGGTTGGCCATAGTGGG 58.345 52.381 6.09 0.00 38.19 4.61
256 503 0.923358 TTAGGTTGGCCATAGTGGGG 59.077 55.000 6.09 0.00 38.19 4.96
257 504 0.991355 TAGGTTGGCCATAGTGGGGG 60.991 60.000 6.09 0.00 38.19 5.40
258 505 2.622447 GGTTGGCCATAGTGGGGGT 61.622 63.158 6.09 0.00 38.19 4.95
259 506 1.283381 GGTTGGCCATAGTGGGGGTA 61.283 60.000 6.09 0.00 38.19 3.69
260 507 0.850784 GTTGGCCATAGTGGGGGTAT 59.149 55.000 6.09 0.00 38.19 2.73
261 508 1.145571 TTGGCCATAGTGGGGGTATC 58.854 55.000 6.09 0.00 38.19 2.24
262 509 0.270699 TGGCCATAGTGGGGGTATCT 59.729 55.000 0.00 0.00 38.19 1.98
263 510 0.984995 GGCCATAGTGGGGGTATCTC 59.015 60.000 0.00 0.00 38.19 2.75
264 511 1.729586 GCCATAGTGGGGGTATCTCA 58.270 55.000 0.00 0.00 38.19 3.27
265 512 1.625818 GCCATAGTGGGGGTATCTCAG 59.374 57.143 0.00 0.00 38.19 3.35
266 513 1.625818 CCATAGTGGGGGTATCTCAGC 59.374 57.143 0.00 0.00 32.67 4.26
267 514 2.614259 CATAGTGGGGGTATCTCAGCT 58.386 52.381 0.00 0.00 0.00 4.24
268 515 2.088104 TAGTGGGGGTATCTCAGCTG 57.912 55.000 7.63 7.63 0.00 4.24
269 516 0.692419 AGTGGGGGTATCTCAGCTGG 60.692 60.000 15.13 4.77 0.00 4.85
270 517 0.983378 GTGGGGGTATCTCAGCTGGT 60.983 60.000 15.13 3.08 0.00 4.00
271 518 0.639943 TGGGGGTATCTCAGCTGGTA 59.360 55.000 15.13 2.22 0.00 3.25
272 519 1.223077 TGGGGGTATCTCAGCTGGTAT 59.777 52.381 15.13 10.23 0.00 2.73
273 520 1.903183 GGGGGTATCTCAGCTGGTATC 59.097 57.143 15.13 5.23 0.00 2.24
274 521 2.609747 GGGGTATCTCAGCTGGTATCA 58.390 52.381 15.13 0.00 0.00 2.15
275 522 3.177228 GGGGTATCTCAGCTGGTATCAT 58.823 50.000 15.13 1.71 0.00 2.45
276 523 3.055530 GGGGTATCTCAGCTGGTATCATG 60.056 52.174 15.13 0.00 0.00 3.07
277 524 3.594134 GGTATCTCAGCTGGTATCATGC 58.406 50.000 15.13 2.76 0.00 4.06
278 525 3.007290 GGTATCTCAGCTGGTATCATGCA 59.993 47.826 15.13 0.00 0.00 3.96
279 526 2.609427 TCTCAGCTGGTATCATGCAC 57.391 50.000 15.13 0.00 0.00 4.57
280 527 2.113807 TCTCAGCTGGTATCATGCACT 58.886 47.619 15.13 0.00 0.00 4.40
281 528 2.102084 TCTCAGCTGGTATCATGCACTC 59.898 50.000 15.13 0.00 0.00 3.51
282 529 1.202452 TCAGCTGGTATCATGCACTCG 60.202 52.381 15.13 0.00 0.00 4.18
283 530 0.105593 AGCTGGTATCATGCACTCGG 59.894 55.000 0.00 0.00 0.00 4.63
284 531 0.882042 GCTGGTATCATGCACTCGGG 60.882 60.000 0.00 0.00 0.00 5.14
285 532 0.752658 CTGGTATCATGCACTCGGGA 59.247 55.000 0.00 0.00 0.00 5.14
286 533 1.138859 CTGGTATCATGCACTCGGGAA 59.861 52.381 0.00 0.00 0.00 3.97
287 534 1.768275 TGGTATCATGCACTCGGGAAT 59.232 47.619 0.00 0.00 0.00 3.01
288 535 2.969262 TGGTATCATGCACTCGGGAATA 59.031 45.455 0.00 0.00 0.00 1.75
289 536 3.006859 TGGTATCATGCACTCGGGAATAG 59.993 47.826 0.00 0.00 0.00 1.73
290 537 2.175878 ATCATGCACTCGGGAATAGC 57.824 50.000 0.00 0.00 0.00 2.97
291 538 0.829990 TCATGCACTCGGGAATAGCA 59.170 50.000 0.00 0.00 39.79 3.49
292 539 1.209261 TCATGCACTCGGGAATAGCAA 59.791 47.619 0.00 0.00 38.85 3.91
293 540 2.016318 CATGCACTCGGGAATAGCAAA 58.984 47.619 0.00 0.00 38.85 3.68
294 541 1.448985 TGCACTCGGGAATAGCAAAC 58.551 50.000 0.00 0.00 31.42 2.93
295 542 0.373716 GCACTCGGGAATAGCAAACG 59.626 55.000 0.00 0.00 0.00 3.60
296 543 1.722011 CACTCGGGAATAGCAAACGT 58.278 50.000 0.00 0.00 0.00 3.99
297 544 1.393539 CACTCGGGAATAGCAAACGTG 59.606 52.381 0.00 0.00 0.00 4.49
312 559 4.843147 CAAACGTGCTGATGTAACAAAGA 58.157 39.130 0.00 0.00 0.00 2.52
313 560 5.270083 CAAACGTGCTGATGTAACAAAGAA 58.730 37.500 0.00 0.00 0.00 2.52
314 561 5.689383 AACGTGCTGATGTAACAAAGAAT 57.311 34.783 0.00 0.00 0.00 2.40
315 562 5.689383 ACGTGCTGATGTAACAAAGAATT 57.311 34.783 0.00 0.00 0.00 2.17
316 563 5.451908 ACGTGCTGATGTAACAAAGAATTG 58.548 37.500 0.00 0.00 42.46 2.32
317 564 5.238432 ACGTGCTGATGTAACAAAGAATTGA 59.762 36.000 0.00 0.00 38.94 2.57
318 565 6.142139 CGTGCTGATGTAACAAAGAATTGAA 58.858 36.000 0.00 0.00 38.94 2.69
319 566 6.303970 CGTGCTGATGTAACAAAGAATTGAAG 59.696 38.462 0.00 0.00 38.94 3.02
320 567 7.362662 GTGCTGATGTAACAAAGAATTGAAGA 58.637 34.615 0.00 0.00 38.94 2.87
321 568 7.862372 GTGCTGATGTAACAAAGAATTGAAGAA 59.138 33.333 0.00 0.00 38.94 2.52
322 569 8.412456 TGCTGATGTAACAAAGAATTGAAGAAA 58.588 29.630 0.00 0.00 38.94 2.52
323 570 9.248291 GCTGATGTAACAAAGAATTGAAGAAAA 57.752 29.630 0.00 0.00 38.94 2.29
331 578 9.591792 AACAAAGAATTGAAGAAAAGAGAAAGG 57.408 29.630 0.00 0.00 38.94 3.11
332 579 8.200120 ACAAAGAATTGAAGAAAAGAGAAAGGG 58.800 33.333 0.00 0.00 38.94 3.95
333 580 7.904558 AAGAATTGAAGAAAAGAGAAAGGGT 57.095 32.000 0.00 0.00 0.00 4.34
334 581 7.904558 AGAATTGAAGAAAAGAGAAAGGGTT 57.095 32.000 0.00 0.00 0.00 4.11
335 582 8.996651 AGAATTGAAGAAAAGAGAAAGGGTTA 57.003 30.769 0.00 0.00 0.00 2.85
336 583 9.072375 AGAATTGAAGAAAAGAGAAAGGGTTAG 57.928 33.333 0.00 0.00 0.00 2.34
337 584 8.996651 AATTGAAGAAAAGAGAAAGGGTTAGA 57.003 30.769 0.00 0.00 0.00 2.10
338 585 8.628630 ATTGAAGAAAAGAGAAAGGGTTAGAG 57.371 34.615 0.00 0.00 0.00 2.43
339 586 7.138054 TGAAGAAAAGAGAAAGGGTTAGAGT 57.862 36.000 0.00 0.00 0.00 3.24
340 587 8.258850 TGAAGAAAAGAGAAAGGGTTAGAGTA 57.741 34.615 0.00 0.00 0.00 2.59
341 588 8.711170 TGAAGAAAAGAGAAAGGGTTAGAGTAA 58.289 33.333 0.00 0.00 0.00 2.24
342 589 8.905660 AAGAAAAGAGAAAGGGTTAGAGTAAC 57.094 34.615 0.00 0.00 37.94 2.50
343 590 8.030913 AGAAAAGAGAAAGGGTTAGAGTAACA 57.969 34.615 0.00 0.00 40.39 2.41
344 591 8.661345 AGAAAAGAGAAAGGGTTAGAGTAACAT 58.339 33.333 0.00 0.00 40.39 2.71
345 592 9.939802 GAAAAGAGAAAGGGTTAGAGTAACATA 57.060 33.333 0.00 0.00 40.39 2.29
346 593 9.945904 AAAAGAGAAAGGGTTAGAGTAACATAG 57.054 33.333 0.00 0.00 40.39 2.23
347 594 7.663043 AGAGAAAGGGTTAGAGTAACATAGG 57.337 40.000 0.00 0.00 40.39 2.57
348 595 7.190501 AGAGAAAGGGTTAGAGTAACATAGGT 58.809 38.462 0.00 0.00 40.39 3.08
349 596 8.342270 AGAGAAAGGGTTAGAGTAACATAGGTA 58.658 37.037 0.00 0.00 40.39 3.08
350 597 8.536340 AGAAAGGGTTAGAGTAACATAGGTAG 57.464 38.462 0.00 0.00 40.39 3.18
351 598 8.342270 AGAAAGGGTTAGAGTAACATAGGTAGA 58.658 37.037 0.00 0.00 40.39 2.59
352 599 9.145442 GAAAGGGTTAGAGTAACATAGGTAGAT 57.855 37.037 0.00 0.00 40.39 1.98
354 601 9.585369 AAGGGTTAGAGTAACATAGGTAGATAC 57.415 37.037 0.00 0.00 40.39 2.24
355 602 8.169393 AGGGTTAGAGTAACATAGGTAGATACC 58.831 40.741 0.43 0.43 42.24 2.73
356 603 7.120432 GGGTTAGAGTAACATAGGTAGATACCG 59.880 44.444 3.41 0.00 44.39 4.02
357 604 7.663493 GGTTAGAGTAACATAGGTAGATACCGT 59.337 40.741 3.41 0.00 44.39 4.83
358 605 9.712305 GTTAGAGTAACATAGGTAGATACCGTA 57.288 37.037 3.41 0.00 43.28 4.02
394 641 9.955208 ATGTTATACTATTTTGTGTCATGCATG 57.045 29.630 21.07 21.07 0.00 4.06
395 642 9.171877 TGTTATACTATTTTGTGTCATGCATGA 57.828 29.630 25.42 25.42 0.00 3.07
492 739 8.753497 TCACATGATACTACTTCACTATGAGT 57.247 34.615 0.00 0.00 0.00 3.41
493 740 9.847224 TCACATGATACTACTTCACTATGAGTA 57.153 33.333 0.00 0.00 0.00 2.59
495 742 8.788806 ACATGATACTACTTCACTATGAGTAGC 58.211 37.037 0.00 0.00 34.47 3.58
496 743 7.747155 TGATACTACTTCACTATGAGTAGCC 57.253 40.000 9.72 2.39 34.47 3.93
497 744 7.519057 TGATACTACTTCACTATGAGTAGCCT 58.481 38.462 9.72 0.00 34.47 4.58
498 745 7.662258 TGATACTACTTCACTATGAGTAGCCTC 59.338 40.741 9.72 7.74 34.47 4.70
574 823 4.432712 GGTAAATGTAAATGCTGCAAGGG 58.567 43.478 6.36 0.00 0.00 3.95
601 851 0.456628 TGATCCCGACGCACGAATAA 59.543 50.000 0.00 0.00 45.77 1.40
786 1036 3.715015 GTGACCTCACCTCCCCTC 58.285 66.667 0.00 0.00 40.85 4.30
790 1040 3.700350 CCTCACCTCCCCTCCCCT 61.700 72.222 0.00 0.00 0.00 4.79
792 1042 2.540910 TCACCTCCCCTCCCCTCT 60.541 66.667 0.00 0.00 0.00 3.69
793 1043 2.041405 CACCTCCCCTCCCCTCTC 60.041 72.222 0.00 0.00 0.00 3.20
795 1045 4.548513 CCTCCCCTCCCCTCTCCG 62.549 77.778 0.00 0.00 0.00 4.63
796 1046 4.548513 CTCCCCTCCCCTCTCCGG 62.549 77.778 0.00 0.00 0.00 5.14
958 1216 2.876581 ACAGTCCCCATTTCCAGTTTC 58.123 47.619 0.00 0.00 0.00 2.78
970 1228 0.602905 CCAGTTTCGAACCGCCTCTT 60.603 55.000 0.00 0.00 0.00 2.85
984 1242 0.459489 CCTCTTTCCTCCTCGAGCTG 59.541 60.000 6.99 1.13 0.00 4.24
985 1243 0.179113 CTCTTTCCTCCTCGAGCTGC 60.179 60.000 6.99 0.00 0.00 5.25
986 1244 1.518133 CTTTCCTCCTCGAGCTGCG 60.518 63.158 6.99 0.00 42.69 5.18
987 1245 2.897641 CTTTCCTCCTCGAGCTGCGG 62.898 65.000 6.99 4.10 41.33 5.69
1057 1315 0.107456 ATCGCCAGAGCCAGGTATTG 59.893 55.000 0.00 0.00 34.57 1.90
1058 1316 1.221840 CGCCAGAGCCAGGTATTGT 59.778 57.895 0.00 0.00 34.57 2.71
1059 1317 0.392998 CGCCAGAGCCAGGTATTGTT 60.393 55.000 0.00 0.00 34.57 2.83
1060 1318 1.839424 GCCAGAGCCAGGTATTGTTT 58.161 50.000 0.00 0.00 0.00 2.83
1061 1319 2.679639 CGCCAGAGCCAGGTATTGTTTA 60.680 50.000 0.00 0.00 34.57 2.01
1063 1321 4.714632 GCCAGAGCCAGGTATTGTTTATA 58.285 43.478 0.00 0.00 0.00 0.98
1064 1322 4.757149 GCCAGAGCCAGGTATTGTTTATAG 59.243 45.833 0.00 0.00 0.00 1.31
1065 1323 4.757149 CCAGAGCCAGGTATTGTTTATAGC 59.243 45.833 0.00 0.00 37.46 2.97
1066 1324 5.455326 CCAGAGCCAGGTATTGTTTATAGCT 60.455 44.000 0.00 0.00 45.97 3.32
1071 1329 3.139077 AGGTATTGTTTATAGCTGCCGC 58.861 45.455 0.00 0.00 43.96 6.53
1072 1330 2.096417 GGTATTGTTTATAGCTGCCGCG 60.096 50.000 0.00 0.00 42.32 6.46
1073 1331 0.944386 ATTGTTTATAGCTGCCGCGG 59.056 50.000 24.05 24.05 42.32 6.46
1074 1332 0.108089 TTGTTTATAGCTGCCGCGGA 60.108 50.000 33.48 13.59 42.32 5.54
1075 1333 0.108089 TGTTTATAGCTGCCGCGGAA 60.108 50.000 33.48 20.72 42.32 4.30
1110 1368 5.047660 TCTGTTTTTGGTGTACTTGTTGCTT 60.048 36.000 0.00 0.00 0.00 3.91
1121 1379 3.450578 ACTTGTTGCTTGCTTGATGTTG 58.549 40.909 0.00 0.00 0.00 3.33
1126 1384 3.853831 TGCTTGCTTGATGTTGGTATG 57.146 42.857 0.00 0.00 0.00 2.39
1127 1385 3.156293 TGCTTGCTTGATGTTGGTATGT 58.844 40.909 0.00 0.00 0.00 2.29
1128 1386 4.331108 TGCTTGCTTGATGTTGGTATGTA 58.669 39.130 0.00 0.00 0.00 2.29
1129 1387 4.155826 TGCTTGCTTGATGTTGGTATGTAC 59.844 41.667 0.00 0.00 0.00 2.90
1130 1388 4.396166 GCTTGCTTGATGTTGGTATGTACT 59.604 41.667 0.00 0.00 0.00 2.73
1131 1389 5.447818 GCTTGCTTGATGTTGGTATGTACTC 60.448 44.000 0.00 0.00 0.00 2.59
1132 1390 4.513442 TGCTTGATGTTGGTATGTACTCC 58.487 43.478 0.00 0.00 0.00 3.85
1133 1391 4.225042 TGCTTGATGTTGGTATGTACTCCT 59.775 41.667 0.00 0.00 0.00 3.69
1134 1392 5.423931 TGCTTGATGTTGGTATGTACTCCTA 59.576 40.000 0.00 0.00 0.00 2.94
1135 1393 5.753921 GCTTGATGTTGGTATGTACTCCTAC 59.246 44.000 0.00 2.69 0.00 3.18
1136 1394 6.407074 GCTTGATGTTGGTATGTACTCCTACT 60.407 42.308 13.68 4.76 32.42 2.57
1137 1395 6.710597 TGATGTTGGTATGTACTCCTACTC 57.289 41.667 13.68 10.56 32.42 2.59
1138 1396 5.597182 TGATGTTGGTATGTACTCCTACTCC 59.403 44.000 13.68 8.67 32.42 3.85
1139 1397 5.202746 TGTTGGTATGTACTCCTACTCCT 57.797 43.478 13.68 0.00 32.42 3.69
1140 1398 6.331577 TGTTGGTATGTACTCCTACTCCTA 57.668 41.667 13.68 0.00 32.42 2.94
1141 1399 6.125029 TGTTGGTATGTACTCCTACTCCTAC 58.875 44.000 13.68 0.00 32.42 3.18
1142 1400 5.981494 TGGTATGTACTCCTACTCCTACA 57.019 43.478 0.00 0.00 0.00 2.74
1143 1401 6.526056 TGGTATGTACTCCTACTCCTACAT 57.474 41.667 0.00 0.00 34.80 2.29
1144 1402 7.637548 TGGTATGTACTCCTACTCCTACATA 57.362 40.000 0.00 0.00 33.06 2.29
1145 1403 7.687388 TGGTATGTACTCCTACTCCTACATAG 58.313 42.308 0.00 0.00 34.33 2.23
1146 1404 6.598850 GGTATGTACTCCTACTCCTACATAGC 59.401 46.154 9.06 9.06 40.55 2.97
1147 1405 5.641789 TGTACTCCTACTCCTACATAGCA 57.358 43.478 0.00 0.00 0.00 3.49
1178 1436 7.337150 TCATCGCTTTTGAGCTTAAATTTTG 57.663 32.000 4.30 0.26 0.00 2.44
1224 1487 8.450578 TTTTGACATATATGGAGCTTACTTGG 57.549 34.615 16.96 0.00 0.00 3.61
1230 1493 9.499369 ACATATATGGAGCTTACTTGGATCTAT 57.501 33.333 16.96 0.00 0.00 1.98
1231 1494 9.761504 CATATATGGAGCTTACTTGGATCTATG 57.238 37.037 4.68 0.00 0.00 2.23
1295 1558 0.031857 CCTGCTCACTCTATGCTCCG 59.968 60.000 0.00 0.00 0.00 4.63
1296 1559 1.028130 CTGCTCACTCTATGCTCCGA 58.972 55.000 0.00 0.00 0.00 4.55
1297 1560 0.741326 TGCTCACTCTATGCTCCGAC 59.259 55.000 0.00 0.00 0.00 4.79
1298 1561 1.028905 GCTCACTCTATGCTCCGACT 58.971 55.000 0.00 0.00 0.00 4.18
1299 1562 1.268999 GCTCACTCTATGCTCCGACTG 60.269 57.143 0.00 0.00 0.00 3.51
1300 1563 2.020720 CTCACTCTATGCTCCGACTGT 58.979 52.381 0.00 0.00 0.00 3.55
1301 1564 2.017782 TCACTCTATGCTCCGACTGTC 58.982 52.381 0.00 0.00 0.00 3.51
1302 1565 1.066303 CACTCTATGCTCCGACTGTCC 59.934 57.143 1.55 0.00 0.00 4.02
1303 1566 0.309302 CTCTATGCTCCGACTGTCCG 59.691 60.000 1.55 0.00 0.00 4.79
1382 1646 8.164240 GCAATTATGGAACACAAGTGGTTCTTT 61.164 37.037 5.08 0.00 41.39 2.52
1389 1655 4.536765 ACACAAGTGGTTCTTTGAGGATT 58.463 39.130 5.08 0.00 33.63 3.01
1391 1657 5.765182 ACACAAGTGGTTCTTTGAGGATTAG 59.235 40.000 5.08 0.00 33.63 1.73
1397 1667 4.010349 GGTTCTTTGAGGATTAGGTGTGG 58.990 47.826 0.00 0.00 0.00 4.17
1399 1669 3.526899 TCTTTGAGGATTAGGTGTGGGA 58.473 45.455 0.00 0.00 0.00 4.37
1432 1703 1.671850 CGGACACGAAGCTAACCATGT 60.672 52.381 0.00 0.00 44.60 3.21
1475 1751 2.448705 GCGTTCGCTGAGAAGGAGC 61.449 63.158 16.16 8.69 44.92 4.70
1871 2150 3.367743 CATTGCTGCCGCTGGTGT 61.368 61.111 0.70 0.00 36.97 4.16
1882 2161 1.225855 CGCTGGTGTTAGCTGTTTGA 58.774 50.000 0.00 0.00 41.51 2.69
1889 2168 0.580104 GTTAGCTGTTTGACACGCGT 59.420 50.000 5.58 5.58 30.98 6.01
1930 2211 3.601443 ACTTATCTGTGCTCTGTGTCC 57.399 47.619 0.00 0.00 0.00 4.02
1957 2238 3.646534 TCAGATACATGAGCTGAGGGAA 58.353 45.455 0.00 0.00 45.64 3.97
1968 2249 1.615384 GCTGAGGGAAAAGCTGTCCAT 60.615 52.381 16.51 10.73 36.83 3.41
1993 2274 4.070552 GAGACGGCGGTGAAGGCT 62.071 66.667 13.24 0.00 34.19 4.58
2057 2338 4.246206 CGACGATGGTAGGCGCGA 62.246 66.667 12.10 0.00 31.51 5.87
2074 2355 3.934391 GACGGTCTGCAAGGACGGG 62.934 68.421 15.17 6.47 39.70 5.28
2152 2433 2.650116 GGTCTTCGAGCAGCAGGGA 61.650 63.158 0.00 0.00 0.00 4.20
2271 2558 2.478746 GTACCCGTACGACGCGAA 59.521 61.111 18.76 0.00 40.91 4.70
2603 2912 4.325344 CCATGGAGGGAGGAAGTAAATGTT 60.325 45.833 5.56 0.00 0.00 2.71
2604 2913 5.104109 CCATGGAGGGAGGAAGTAAATGTTA 60.104 44.000 5.56 0.00 0.00 2.41
2605 2914 5.693769 TGGAGGGAGGAAGTAAATGTTAG 57.306 43.478 0.00 0.00 0.00 2.34
2644 2957 7.664758 ACAGTACAAAAATAACGGTCTCTAGT 58.335 34.615 0.00 0.00 0.00 2.57
2645 2958 7.811713 ACAGTACAAAAATAACGGTCTCTAGTC 59.188 37.037 0.00 0.00 0.00 2.59
2646 2959 8.027771 CAGTACAAAAATAACGGTCTCTAGTCT 58.972 37.037 0.00 0.00 0.00 3.24
2647 2960 9.236006 AGTACAAAAATAACGGTCTCTAGTCTA 57.764 33.333 0.00 0.00 0.00 2.59
2648 2961 9.500864 GTACAAAAATAACGGTCTCTAGTCTAG 57.499 37.037 0.00 0.00 0.00 2.43
2720 3034 0.616111 CCTGGTACCTGAGTCCTGCT 60.616 60.000 19.66 0.00 0.00 4.24
2782 3096 3.394674 TGCGACAAAATGGTCAGAGTA 57.605 42.857 0.00 0.00 37.66 2.59
2830 3144 2.168313 TCAGACTGAAACACACTGCTCA 59.832 45.455 1.64 0.00 0.00 4.26
2852 3166 4.350816 CAGGGATAGGGATTCATTGTACCA 59.649 45.833 0.00 0.00 0.00 3.25
2859 3173 6.530019 AGGGATTCATTGTACCAATGAAAC 57.470 37.500 26.83 24.21 46.06 2.78
2862 3176 6.295011 GGGATTCATTGTACCAATGAAACACA 60.295 38.462 26.83 11.73 46.06 3.72
2866 3195 6.734137 TCATTGTACCAATGAAACACACTTC 58.266 36.000 15.28 0.00 34.07 3.01
2867 3196 6.545666 TCATTGTACCAATGAAACACACTTCT 59.454 34.615 15.28 0.00 34.07 2.85
2876 3205 9.097257 CCAATGAAACACACTTCTACAAATTTT 57.903 29.630 0.00 0.00 0.00 1.82
2899 3228 3.254060 TCTAACTTGCTTCAGACATCGC 58.746 45.455 0.00 0.00 0.00 4.58
2921 3251 4.446413 GTGATCCGTCGCCCCGTT 62.446 66.667 0.00 0.00 0.00 4.44
2932 3262 0.179129 CGCCCCGTTCGTAGTACAAT 60.179 55.000 0.38 0.00 0.00 2.71
2941 3271 2.871133 TCGTAGTACAATTGCCGTCTG 58.129 47.619 5.05 0.00 0.00 3.51
2957 3287 4.246409 CGTCTGCGGTAGAATTTTCTTC 57.754 45.455 0.00 0.00 38.70 2.87
2978 3309 5.804692 TCTTCACAAGCGTCTTTTAACAA 57.195 34.783 0.00 0.00 0.00 2.83
3060 3474 9.791820 AAACTTATACAAACACCAACAGTAAAC 57.208 29.630 0.00 0.00 0.00 2.01
3061 3475 8.508883 ACTTATACAAACACCAACAGTAAACA 57.491 30.769 0.00 0.00 0.00 2.83
3062 3476 8.400186 ACTTATACAAACACCAACAGTAAACAC 58.600 33.333 0.00 0.00 0.00 3.32
3063 3477 6.761099 ATACAAACACCAACAGTAAACACA 57.239 33.333 0.00 0.00 0.00 3.72
3064 3478 5.652994 ACAAACACCAACAGTAAACACAT 57.347 34.783 0.00 0.00 0.00 3.21
3065 3479 6.031751 ACAAACACCAACAGTAAACACATT 57.968 33.333 0.00 0.00 0.00 2.71
3066 3480 6.459923 ACAAACACCAACAGTAAACACATTT 58.540 32.000 0.00 0.00 0.00 2.32
3067 3481 6.367422 ACAAACACCAACAGTAAACACATTTG 59.633 34.615 0.00 0.00 0.00 2.32
3068 3482 5.004922 ACACCAACAGTAAACACATTTGG 57.995 39.130 0.00 0.00 39.56 3.28
3069 3483 4.464597 ACACCAACAGTAAACACATTTGGT 59.535 37.500 0.00 0.00 46.01 3.67
3070 3484 5.652891 ACACCAACAGTAAACACATTTGGTA 59.347 36.000 3.59 0.00 43.83 3.25
3071 3485 6.153000 ACACCAACAGTAAACACATTTGGTAA 59.847 34.615 3.59 0.00 43.83 2.85
3072 3486 7.036220 CACCAACAGTAAACACATTTGGTAAA 58.964 34.615 3.59 0.00 43.83 2.01
3073 3487 7.545965 CACCAACAGTAAACACATTTGGTAAAA 59.454 33.333 3.59 0.00 43.83 1.52
3074 3488 7.546316 ACCAACAGTAAACACATTTGGTAAAAC 59.454 33.333 1.97 0.00 43.83 2.43
3075 3489 7.762159 CCAACAGTAAACACATTTGGTAAAACT 59.238 33.333 0.00 0.00 30.79 2.66
3076 3490 8.591312 CAACAGTAAACACATTTGGTAAAACTG 58.409 33.333 5.77 5.77 0.00 3.16
3077 3491 8.057536 ACAGTAAACACATTTGGTAAAACTGA 57.942 30.769 11.71 0.00 0.00 3.41
3078 3492 8.524487 ACAGTAAACACATTTGGTAAAACTGAA 58.476 29.630 11.71 0.00 0.00 3.02
3079 3493 9.360093 CAGTAAACACATTTGGTAAAACTGAAA 57.640 29.630 2.38 0.00 0.00 2.69
3080 3494 9.581099 AGTAAACACATTTGGTAAAACTGAAAG 57.419 29.630 0.00 0.00 42.29 2.62
3097 3511 5.981174 CTGAAAGTTGCATCAATGGTTTTG 58.019 37.500 0.00 0.00 0.00 2.44
3098 3512 5.668471 TGAAAGTTGCATCAATGGTTTTGA 58.332 33.333 0.00 0.00 0.00 2.69
3099 3513 6.111382 TGAAAGTTGCATCAATGGTTTTGAA 58.889 32.000 0.00 0.00 31.55 2.69
3100 3514 6.596888 TGAAAGTTGCATCAATGGTTTTGAAA 59.403 30.769 0.00 0.00 31.55 2.69
3101 3515 6.998968 AAGTTGCATCAATGGTTTTGAAAA 57.001 29.167 0.00 0.00 31.55 2.29
3102 3516 6.607735 AGTTGCATCAATGGTTTTGAAAAG 57.392 33.333 0.00 0.00 31.55 2.27
3103 3517 5.528320 AGTTGCATCAATGGTTTTGAAAAGG 59.472 36.000 0.00 0.00 31.55 3.11
3104 3518 3.814283 TGCATCAATGGTTTTGAAAAGGC 59.186 39.130 0.00 0.00 31.55 4.35
3105 3519 3.189080 GCATCAATGGTTTTGAAAAGGCC 59.811 43.478 0.00 0.00 31.55 5.19
3106 3520 3.104843 TCAATGGTTTTGAAAAGGCCG 57.895 42.857 0.00 0.00 0.00 6.13
3107 3521 1.530720 CAATGGTTTTGAAAAGGCCGC 59.469 47.619 0.00 0.00 0.00 6.53
3108 3522 0.755686 ATGGTTTTGAAAAGGCCGCA 59.244 45.000 0.00 0.00 0.00 5.69
3109 3523 0.755686 TGGTTTTGAAAAGGCCGCAT 59.244 45.000 0.00 0.00 0.00 4.73
3110 3524 1.964223 TGGTTTTGAAAAGGCCGCATA 59.036 42.857 0.00 0.00 0.00 3.14
3111 3525 2.288518 TGGTTTTGAAAAGGCCGCATAC 60.289 45.455 0.00 0.00 0.00 2.39
3112 3526 2.288518 GGTTTTGAAAAGGCCGCATACA 60.289 45.455 0.00 0.00 0.00 2.29
3113 3527 3.584834 GTTTTGAAAAGGCCGCATACAT 58.415 40.909 0.00 0.00 0.00 2.29
3114 3528 3.951775 TTTGAAAAGGCCGCATACATT 57.048 38.095 0.00 0.00 0.00 2.71
3115 3529 3.951775 TTGAAAAGGCCGCATACATTT 57.048 38.095 0.00 0.00 0.00 2.32
3116 3530 3.229276 TGAAAAGGCCGCATACATTTG 57.771 42.857 0.00 0.00 0.00 2.32
3117 3531 2.094286 TGAAAAGGCCGCATACATTTGG 60.094 45.455 0.00 0.00 0.00 3.28
3118 3532 1.555967 AAAGGCCGCATACATTTGGT 58.444 45.000 0.00 0.00 0.00 3.67
3119 3533 2.428544 AAGGCCGCATACATTTGGTA 57.571 45.000 0.00 0.00 36.16 3.25
3120 3534 2.428544 AGGCCGCATACATTTGGTAA 57.571 45.000 0.00 0.00 35.14 2.85
3121 3535 2.729194 AGGCCGCATACATTTGGTAAA 58.271 42.857 0.00 0.00 35.14 2.01
3122 3536 3.093057 AGGCCGCATACATTTGGTAAAA 58.907 40.909 0.00 0.00 35.14 1.52
3123 3537 3.119280 AGGCCGCATACATTTGGTAAAAC 60.119 43.478 0.00 0.00 35.14 2.43
3124 3538 3.119280 GGCCGCATACATTTGGTAAAACT 60.119 43.478 0.00 0.00 35.14 2.66
3125 3539 3.857093 GCCGCATACATTTGGTAAAACTG 59.143 43.478 0.00 0.00 35.14 3.16
3126 3540 4.380023 GCCGCATACATTTGGTAAAACTGA 60.380 41.667 0.00 0.00 35.14 3.41
3127 3541 5.704888 CCGCATACATTTGGTAAAACTGAA 58.295 37.500 0.00 0.00 35.14 3.02
3128 3542 6.153067 CCGCATACATTTGGTAAAACTGAAA 58.847 36.000 0.00 0.00 35.14 2.69
3129 3543 6.307800 CCGCATACATTTGGTAAAACTGAAAG 59.692 38.462 0.00 0.00 36.04 2.62
3130 3544 6.861055 CGCATACATTTGGTAAAACTGAAAGT 59.139 34.615 0.00 0.00 42.64 2.66
3131 3545 7.381139 CGCATACATTTGGTAAAACTGAAAGTT 59.619 33.333 0.00 0.00 46.85 2.66
3132 3546 8.487176 GCATACATTTGGTAAAACTGAAAGTTG 58.513 33.333 0.00 0.00 45.21 3.16
3133 3547 8.487176 CATACATTTGGTAAAACTGAAAGTTGC 58.513 33.333 0.00 0.00 45.21 4.17
3134 3548 7.381139 ATACATTTGGTAAAACTGAAAGTTGCG 59.619 33.333 0.00 0.00 45.21 4.85
3143 3557 3.354089 CTGAAAGTTGCGTCAATGGTT 57.646 42.857 0.00 0.00 0.00 3.67
3144 3558 3.705604 CTGAAAGTTGCGTCAATGGTTT 58.294 40.909 0.00 0.00 0.00 3.27
3145 3559 4.111916 CTGAAAGTTGCGTCAATGGTTTT 58.888 39.130 0.00 0.00 0.00 2.43
3146 3560 3.862267 TGAAAGTTGCGTCAATGGTTTTG 59.138 39.130 0.00 0.00 0.00 2.44
3147 3561 3.791973 AAGTTGCGTCAATGGTTTTGA 57.208 38.095 0.00 0.00 0.00 2.69
3148 3562 3.791973 AGTTGCGTCAATGGTTTTGAA 57.208 38.095 0.00 0.00 0.00 2.69
3149 3563 4.116747 AGTTGCGTCAATGGTTTTGAAA 57.883 36.364 0.00 0.00 0.00 2.69
3150 3564 4.499183 AGTTGCGTCAATGGTTTTGAAAA 58.501 34.783 0.00 0.00 0.00 2.29
3151 3565 4.566360 AGTTGCGTCAATGGTTTTGAAAAG 59.434 37.500 0.00 0.00 0.00 2.27
3152 3566 3.452474 TGCGTCAATGGTTTTGAAAAGG 58.548 40.909 0.00 0.00 0.00 3.11
3153 3567 2.220824 GCGTCAATGGTTTTGAAAAGGC 59.779 45.455 0.00 0.00 0.00 4.35
3154 3568 2.799978 CGTCAATGGTTTTGAAAAGGCC 59.200 45.455 0.00 0.00 0.00 5.19
3155 3569 2.799978 GTCAATGGTTTTGAAAAGGCCG 59.200 45.455 0.00 0.00 0.00 6.13
3156 3570 1.530720 CAATGGTTTTGAAAAGGCCGC 59.469 47.619 0.00 0.00 0.00 6.53
3157 3571 0.755686 ATGGTTTTGAAAAGGCCGCA 59.244 45.000 0.00 0.00 0.00 5.69
3196 3610 5.668471 TGAAAGTTGCATCAATGGTTTTGA 58.332 33.333 0.00 0.00 0.00 2.69
3197 3611 6.111382 TGAAAGTTGCATCAATGGTTTTGAA 58.889 32.000 0.00 0.00 31.55 2.69
3198 3612 6.596888 TGAAAGTTGCATCAATGGTTTTGAAA 59.403 30.769 0.00 0.00 31.55 2.69
3199 3613 6.998968 AAGTTGCATCAATGGTTTTGAAAA 57.001 29.167 0.00 0.00 31.55 2.29
3200 3614 6.607735 AGTTGCATCAATGGTTTTGAAAAG 57.392 33.333 0.00 0.00 31.55 2.27
3201 3615 5.528320 AGTTGCATCAATGGTTTTGAAAAGG 59.472 36.000 0.00 0.00 31.55 3.11
3202 3616 3.814283 TGCATCAATGGTTTTGAAAAGGC 59.186 39.130 0.00 0.00 31.55 4.35
3203 3617 3.189080 GCATCAATGGTTTTGAAAAGGCC 59.811 43.478 0.00 0.00 31.55 5.19
3204 3618 3.104843 TCAATGGTTTTGAAAAGGCCG 57.895 42.857 0.00 0.00 0.00 6.13
3205 3619 1.530720 CAATGGTTTTGAAAAGGCCGC 59.469 47.619 0.00 0.00 0.00 6.53
3206 3620 0.755686 ATGGTTTTGAAAAGGCCGCA 59.244 45.000 0.00 0.00 0.00 5.69
3207 3621 0.755686 TGGTTTTGAAAAGGCCGCAT 59.244 45.000 0.00 0.00 0.00 4.73
3208 3622 1.964223 TGGTTTTGAAAAGGCCGCATA 59.036 42.857 0.00 0.00 0.00 3.14
3209 3623 2.288518 TGGTTTTGAAAAGGCCGCATAC 60.289 45.455 0.00 0.00 0.00 2.39
3210 3624 2.288518 GGTTTTGAAAAGGCCGCATACA 60.289 45.455 0.00 0.00 0.00 2.29
3211 3625 3.584834 GTTTTGAAAAGGCCGCATACAT 58.415 40.909 0.00 0.00 0.00 2.29
3212 3626 3.951775 TTTGAAAAGGCCGCATACATT 57.048 38.095 0.00 0.00 0.00 2.71
3213 3627 3.951775 TTGAAAAGGCCGCATACATTT 57.048 38.095 0.00 0.00 0.00 2.32
3214 3628 3.229276 TGAAAAGGCCGCATACATTTG 57.771 42.857 0.00 0.00 0.00 2.32
3215 3629 2.094286 TGAAAAGGCCGCATACATTTGG 60.094 45.455 0.00 0.00 0.00 3.28
3216 3630 1.555967 AAAGGCCGCATACATTTGGT 58.444 45.000 0.00 0.00 0.00 3.67
3217 3631 2.428544 AAGGCCGCATACATTTGGTA 57.571 45.000 0.00 0.00 36.16 3.25
3218 3632 2.428544 AGGCCGCATACATTTGGTAA 57.571 45.000 0.00 0.00 35.14 2.85
3219 3633 2.729194 AGGCCGCATACATTTGGTAAA 58.271 42.857 0.00 0.00 35.14 2.01
3220 3634 3.093057 AGGCCGCATACATTTGGTAAAA 58.907 40.909 0.00 0.00 35.14 1.52
3221 3635 3.119280 AGGCCGCATACATTTGGTAAAAC 60.119 43.478 0.00 0.00 35.14 2.43
3222 3636 3.183754 GCCGCATACATTTGGTAAAACC 58.816 45.455 0.00 0.00 39.22 3.27
3223 3637 3.430931 CCGCATACATTTGGTAAAACCG 58.569 45.455 0.00 0.00 42.58 4.44
3224 3638 3.127203 CCGCATACATTTGGTAAAACCGA 59.873 43.478 0.00 0.00 42.58 4.69
3225 3639 4.379603 CCGCATACATTTGGTAAAACCGAA 60.380 41.667 1.29 1.29 45.22 4.30
3226 3640 5.154932 CGCATACATTTGGTAAAACCGAAA 58.845 37.500 2.93 0.65 44.37 3.46
3227 3641 5.285134 CGCATACATTTGGTAAAACCGAAAG 59.715 40.000 2.93 1.78 44.37 2.62
3228 3642 6.153756 GCATACATTTGGTAAAACCGAAAGT 58.846 36.000 10.76 10.76 44.37 2.66
3229 3643 6.643360 GCATACATTTGGTAAAACCGAAAGTT 59.357 34.615 11.12 0.00 44.37 2.66
3230 3644 7.358848 GCATACATTTGGTAAAACCGAAAGTTG 60.359 37.037 11.12 10.25 44.37 3.16
3231 3645 4.806775 ACATTTGGTAAAACCGAAAGTTGC 59.193 37.500 2.93 0.00 44.37 4.17
3232 3646 4.451629 TTTGGTAAAACCGAAAGTTGCA 57.548 36.364 0.00 0.00 42.58 4.08
3233 3647 4.657436 TTGGTAAAACCGAAAGTTGCAT 57.343 36.364 0.00 0.00 42.58 3.96
3234 3648 4.231718 TGGTAAAACCGAAAGTTGCATC 57.768 40.909 0.00 0.00 42.58 3.91
3235 3649 3.632604 TGGTAAAACCGAAAGTTGCATCA 59.367 39.130 0.00 0.00 42.58 3.07
3236 3650 4.098044 TGGTAAAACCGAAAGTTGCATCAA 59.902 37.500 0.00 0.00 42.58 2.57
3237 3651 4.443063 GGTAAAACCGAAAGTTGCATCAAC 59.557 41.667 1.71 1.71 43.83 3.18
3248 3662 4.849111 GTTGCATCAACGGTTTTGAAAA 57.151 36.364 5.09 0.00 34.63 2.29
3249 3663 4.821012 GTTGCATCAACGGTTTTGAAAAG 58.179 39.130 0.00 0.00 34.63 2.27
3250 3664 3.452474 TGCATCAACGGTTTTGAAAAGG 58.548 40.909 0.00 0.00 31.55 3.11
3251 3665 2.220824 GCATCAACGGTTTTGAAAAGGC 59.779 45.455 0.00 0.00 31.55 4.35
3252 3666 2.588027 TCAACGGTTTTGAAAAGGCC 57.412 45.000 0.00 0.00 0.00 5.19
3253 3667 1.202313 TCAACGGTTTTGAAAAGGCCG 60.202 47.619 15.41 15.41 41.08 6.13
3254 3668 0.528901 AACGGTTTTGAAAAGGCCGC 60.529 50.000 16.51 0.00 39.89 6.53
3255 3669 1.066587 CGGTTTTGAAAAGGCCGCA 59.933 52.632 6.75 0.00 33.80 5.69
3256 3670 0.319469 CGGTTTTGAAAAGGCCGCAT 60.319 50.000 6.75 0.00 33.80 4.73
3257 3671 1.068194 CGGTTTTGAAAAGGCCGCATA 60.068 47.619 6.75 0.00 33.80 3.14
3258 3672 2.333926 GGTTTTGAAAAGGCCGCATAC 58.666 47.619 0.00 0.00 0.00 2.39
3259 3673 2.288518 GGTTTTGAAAAGGCCGCATACA 60.289 45.455 0.00 0.00 0.00 2.29
3260 3674 3.584834 GTTTTGAAAAGGCCGCATACAT 58.415 40.909 0.00 0.00 0.00 2.29
3261 3675 3.951775 TTTGAAAAGGCCGCATACATT 57.048 38.095 0.00 0.00 0.00 2.71
3262 3676 3.951775 TTGAAAAGGCCGCATACATTT 57.048 38.095 0.00 0.00 0.00 2.32
3263 3677 3.229276 TGAAAAGGCCGCATACATTTG 57.771 42.857 0.00 0.00 0.00 2.32
3264 3678 2.094286 TGAAAAGGCCGCATACATTTGG 60.094 45.455 0.00 0.00 0.00 3.28
3265 3679 1.555967 AAAGGCCGCATACATTTGGT 58.444 45.000 0.00 0.00 0.00 3.67
3266 3680 2.428544 AAGGCCGCATACATTTGGTA 57.571 45.000 0.00 0.00 36.16 3.25
3267 3681 2.428544 AGGCCGCATACATTTGGTAA 57.571 45.000 0.00 0.00 35.14 2.85
3268 3682 2.729194 AGGCCGCATACATTTGGTAAA 58.271 42.857 0.00 0.00 35.14 2.01
3269 3683 3.093057 AGGCCGCATACATTTGGTAAAA 58.907 40.909 0.00 0.00 35.14 1.52
3270 3684 3.119280 AGGCCGCATACATTTGGTAAAAC 60.119 43.478 0.00 0.00 35.14 2.43
3271 3685 3.119280 GGCCGCATACATTTGGTAAAACT 60.119 43.478 0.00 0.00 35.14 2.66
3272 3686 3.857093 GCCGCATACATTTGGTAAAACTG 59.143 43.478 0.00 0.00 35.14 3.16
3273 3687 4.380023 GCCGCATACATTTGGTAAAACTGA 60.380 41.667 0.00 0.00 35.14 3.41
3274 3688 5.704888 CCGCATACATTTGGTAAAACTGAA 58.295 37.500 0.00 0.00 35.14 3.02
3275 3689 6.153067 CCGCATACATTTGGTAAAACTGAAA 58.847 36.000 0.00 0.00 35.14 2.69
3276 3690 6.307800 CCGCATACATTTGGTAAAACTGAAAG 59.692 38.462 0.00 0.00 36.04 2.62
3277 3691 6.861055 CGCATACATTTGGTAAAACTGAAAGT 59.139 34.615 0.00 0.00 42.64 2.66
3278 3692 7.381139 CGCATACATTTGGTAAAACTGAAAGTT 59.619 33.333 0.00 0.00 46.85 2.66
3279 3693 8.487176 GCATACATTTGGTAAAACTGAAAGTTG 58.513 33.333 0.00 0.00 45.21 3.16
3280 3694 8.487176 CATACATTTGGTAAAACTGAAAGTTGC 58.513 33.333 0.00 0.00 45.21 4.17
3281 3695 8.200792 ATACATTTGGTAAAACTGAAAGTTGCA 58.799 29.630 0.00 0.00 45.21 4.08
3293 3707 5.981174 CTGAAAGTTGCATCAATGGTTTTG 58.019 37.500 0.00 0.00 0.00 2.44
3309 3723 2.367030 TTTGAAAAGGCCGCATGATG 57.633 45.000 0.00 0.00 0.00 3.07
3334 3748 5.363580 GGAATGAAAGATCCCCAAATAAGCA 59.636 40.000 0.00 0.00 0.00 3.91
3336 3750 4.280819 TGAAAGATCCCCAAATAAGCAGG 58.719 43.478 0.00 0.00 0.00 4.85
3413 3827 3.007940 TCTTCCACAAGAACATCGGTGAT 59.992 43.478 0.65 0.00 35.57 3.06
3417 3831 3.066380 CACAAGAACATCGGTGATGACA 58.934 45.455 13.36 0.00 42.09 3.58
3435 3849 3.423154 CCGCTTGCCCTCGTTGTC 61.423 66.667 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 8.262227 TCAGTCATACATTTTACTTATTCCGGT 58.738 33.333 0.00 0.00 0.00 5.28
146 151 5.233957 TGTTGATGGCTTGATTCGTATTG 57.766 39.130 0.00 0.00 0.00 1.90
201 448 0.833287 ACCGCAGCAATCCTCTACAT 59.167 50.000 0.00 0.00 0.00 2.29
234 481 2.654863 CCACTATGGCCAACCTAAAGG 58.345 52.381 10.96 1.58 42.17 3.11
239 486 2.316586 CCCCCACTATGGCCAACCT 61.317 63.158 10.96 0.00 35.79 3.50
240 487 1.283381 TACCCCCACTATGGCCAACC 61.283 60.000 10.96 0.00 35.79 3.77
241 488 0.850784 ATACCCCCACTATGGCCAAC 59.149 55.000 10.96 0.00 35.79 3.77
242 489 1.145571 GATACCCCCACTATGGCCAA 58.854 55.000 10.96 0.00 35.79 4.52
243 490 0.270699 AGATACCCCCACTATGGCCA 59.729 55.000 8.56 8.56 35.79 5.36
244 491 0.984995 GAGATACCCCCACTATGGCC 59.015 60.000 0.00 0.00 35.79 5.36
245 492 1.625818 CTGAGATACCCCCACTATGGC 59.374 57.143 0.00 0.00 35.79 4.40
246 493 1.625818 GCTGAGATACCCCCACTATGG 59.374 57.143 0.00 0.00 37.25 2.74
247 494 2.301296 CAGCTGAGATACCCCCACTATG 59.699 54.545 8.42 0.00 0.00 2.23
248 495 2.614259 CAGCTGAGATACCCCCACTAT 58.386 52.381 8.42 0.00 0.00 2.12
249 496 1.413082 CCAGCTGAGATACCCCCACTA 60.413 57.143 17.39 0.00 0.00 2.74
250 497 0.692419 CCAGCTGAGATACCCCCACT 60.692 60.000 17.39 0.00 0.00 4.00
251 498 0.983378 ACCAGCTGAGATACCCCCAC 60.983 60.000 17.39 0.00 0.00 4.61
252 499 0.639943 TACCAGCTGAGATACCCCCA 59.360 55.000 17.39 0.00 0.00 4.96
253 500 1.903183 GATACCAGCTGAGATACCCCC 59.097 57.143 17.39 0.00 0.00 5.40
254 501 2.609747 TGATACCAGCTGAGATACCCC 58.390 52.381 17.39 0.00 0.00 4.95
255 502 3.618507 GCATGATACCAGCTGAGATACCC 60.619 52.174 17.39 1.80 0.00 3.69
256 503 3.007290 TGCATGATACCAGCTGAGATACC 59.993 47.826 17.39 0.00 0.00 2.73
257 504 3.993081 GTGCATGATACCAGCTGAGATAC 59.007 47.826 17.39 3.18 0.00 2.24
258 505 3.899980 AGTGCATGATACCAGCTGAGATA 59.100 43.478 17.39 4.97 0.00 1.98
259 506 2.704596 AGTGCATGATACCAGCTGAGAT 59.295 45.455 17.39 7.73 0.00 2.75
260 507 2.102084 GAGTGCATGATACCAGCTGAGA 59.898 50.000 17.39 2.03 0.00 3.27
261 508 2.481854 GAGTGCATGATACCAGCTGAG 58.518 52.381 17.39 8.04 0.00 3.35
262 509 1.202452 CGAGTGCATGATACCAGCTGA 60.202 52.381 17.39 0.00 0.00 4.26
263 510 1.215244 CGAGTGCATGATACCAGCTG 58.785 55.000 6.78 6.78 0.00 4.24
264 511 0.105593 CCGAGTGCATGATACCAGCT 59.894 55.000 0.00 0.00 0.00 4.24
265 512 0.882042 CCCGAGTGCATGATACCAGC 60.882 60.000 0.00 0.00 0.00 4.85
266 513 0.752658 TCCCGAGTGCATGATACCAG 59.247 55.000 0.00 0.00 0.00 4.00
267 514 1.199615 TTCCCGAGTGCATGATACCA 58.800 50.000 0.00 0.00 0.00 3.25
268 515 2.550830 ATTCCCGAGTGCATGATACC 57.449 50.000 0.00 0.00 0.00 2.73
269 516 2.996621 GCTATTCCCGAGTGCATGATAC 59.003 50.000 0.00 0.00 0.00 2.24
270 517 2.632512 TGCTATTCCCGAGTGCATGATA 59.367 45.455 0.00 0.00 0.00 2.15
271 518 1.417517 TGCTATTCCCGAGTGCATGAT 59.582 47.619 0.00 0.00 0.00 2.45
272 519 0.829990 TGCTATTCCCGAGTGCATGA 59.170 50.000 0.00 0.00 0.00 3.07
273 520 1.667236 TTGCTATTCCCGAGTGCATG 58.333 50.000 0.00 0.00 33.50 4.06
274 521 2.017049 GTTTGCTATTCCCGAGTGCAT 58.983 47.619 0.00 0.00 33.50 3.96
275 522 1.448985 GTTTGCTATTCCCGAGTGCA 58.551 50.000 0.00 0.00 0.00 4.57
276 523 0.373716 CGTTTGCTATTCCCGAGTGC 59.626 55.000 0.00 0.00 0.00 4.40
277 524 1.393539 CACGTTTGCTATTCCCGAGTG 59.606 52.381 0.00 0.00 0.00 3.51
278 525 1.722011 CACGTTTGCTATTCCCGAGT 58.278 50.000 0.00 0.00 0.00 4.18
279 526 0.373716 GCACGTTTGCTATTCCCGAG 59.626 55.000 0.00 0.00 46.17 4.63
280 527 2.462503 GCACGTTTGCTATTCCCGA 58.537 52.632 0.00 0.00 46.17 5.14
290 537 4.843147 TCTTTGTTACATCAGCACGTTTG 58.157 39.130 0.00 0.00 0.00 2.93
291 538 5.493133 TTCTTTGTTACATCAGCACGTTT 57.507 34.783 0.00 0.00 0.00 3.60
292 539 5.689383 ATTCTTTGTTACATCAGCACGTT 57.311 34.783 0.00 0.00 0.00 3.99
293 540 5.238432 TCAATTCTTTGTTACATCAGCACGT 59.762 36.000 0.00 0.00 34.32 4.49
294 541 5.688823 TCAATTCTTTGTTACATCAGCACG 58.311 37.500 0.00 0.00 34.32 5.34
295 542 7.362662 TCTTCAATTCTTTGTTACATCAGCAC 58.637 34.615 0.00 0.00 34.32 4.40
296 543 7.509141 TCTTCAATTCTTTGTTACATCAGCA 57.491 32.000 0.00 0.00 34.32 4.41
297 544 8.801715 TTTCTTCAATTCTTTGTTACATCAGC 57.198 30.769 0.00 0.00 34.32 4.26
305 552 9.591792 CCTTTCTCTTTTCTTCAATTCTTTGTT 57.408 29.630 0.00 0.00 34.32 2.83
306 553 8.200120 CCCTTTCTCTTTTCTTCAATTCTTTGT 58.800 33.333 0.00 0.00 34.32 2.83
307 554 8.200120 ACCCTTTCTCTTTTCTTCAATTCTTTG 58.800 33.333 0.00 0.00 0.00 2.77
308 555 8.311395 ACCCTTTCTCTTTTCTTCAATTCTTT 57.689 30.769 0.00 0.00 0.00 2.52
309 556 7.904558 ACCCTTTCTCTTTTCTTCAATTCTT 57.095 32.000 0.00 0.00 0.00 2.52
310 557 7.904558 AACCCTTTCTCTTTTCTTCAATTCT 57.095 32.000 0.00 0.00 0.00 2.40
311 558 9.067986 TCTAACCCTTTCTCTTTTCTTCAATTC 57.932 33.333 0.00 0.00 0.00 2.17
312 559 8.996651 TCTAACCCTTTCTCTTTTCTTCAATT 57.003 30.769 0.00 0.00 0.00 2.32
313 560 8.221251 ACTCTAACCCTTTCTCTTTTCTTCAAT 58.779 33.333 0.00 0.00 0.00 2.57
314 561 7.574607 ACTCTAACCCTTTCTCTTTTCTTCAA 58.425 34.615 0.00 0.00 0.00 2.69
315 562 7.138054 ACTCTAACCCTTTCTCTTTTCTTCA 57.862 36.000 0.00 0.00 0.00 3.02
316 563 8.991026 GTTACTCTAACCCTTTCTCTTTTCTTC 58.009 37.037 0.00 0.00 32.59 2.87
317 564 8.491958 TGTTACTCTAACCCTTTCTCTTTTCTT 58.508 33.333 0.00 0.00 37.88 2.52
318 565 8.030913 TGTTACTCTAACCCTTTCTCTTTTCT 57.969 34.615 0.00 0.00 37.88 2.52
319 566 8.850007 ATGTTACTCTAACCCTTTCTCTTTTC 57.150 34.615 0.00 0.00 37.88 2.29
320 567 9.945904 CTATGTTACTCTAACCCTTTCTCTTTT 57.054 33.333 0.00 0.00 37.88 2.27
321 568 8.541234 CCTATGTTACTCTAACCCTTTCTCTTT 58.459 37.037 0.00 0.00 37.88 2.52
322 569 7.679025 ACCTATGTTACTCTAACCCTTTCTCTT 59.321 37.037 0.00 0.00 37.88 2.85
323 570 7.190501 ACCTATGTTACTCTAACCCTTTCTCT 58.809 38.462 0.00 0.00 37.88 3.10
324 571 7.421087 ACCTATGTTACTCTAACCCTTTCTC 57.579 40.000 0.00 0.00 37.88 2.87
325 572 8.342270 TCTACCTATGTTACTCTAACCCTTTCT 58.658 37.037 0.00 0.00 37.88 2.52
326 573 8.530804 TCTACCTATGTTACTCTAACCCTTTC 57.469 38.462 0.00 0.00 37.88 2.62
328 575 9.585369 GTATCTACCTATGTTACTCTAACCCTT 57.415 37.037 0.00 0.00 37.88 3.95
329 576 8.169393 GGTATCTACCTATGTTACTCTAACCCT 58.831 40.741 0.00 0.00 43.10 4.34
330 577 7.120432 CGGTATCTACCTATGTTACTCTAACCC 59.880 44.444 4.93 0.00 44.25 4.11
331 578 7.663493 ACGGTATCTACCTATGTTACTCTAACC 59.337 40.741 4.93 0.00 44.25 2.85
332 579 8.614469 ACGGTATCTACCTATGTTACTCTAAC 57.386 38.462 4.93 0.00 44.25 2.34
334 581 9.712305 GTTACGGTATCTACCTATGTTACTCTA 57.288 37.037 4.93 0.00 44.25 2.43
335 582 8.213679 TGTTACGGTATCTACCTATGTTACTCT 58.786 37.037 4.93 0.00 44.25 3.24
336 583 8.383318 TGTTACGGTATCTACCTATGTTACTC 57.617 38.462 4.93 0.00 44.25 2.59
337 584 8.930846 ATGTTACGGTATCTACCTATGTTACT 57.069 34.615 4.93 0.00 44.25 2.24
368 615 9.955208 CATGCATGACACAAAATAGTATAACAT 57.045 29.630 22.59 0.00 0.00 2.71
369 616 9.171877 TCATGCATGACACAAAATAGTATAACA 57.828 29.630 25.42 0.00 0.00 2.41
466 713 9.360901 ACTCATAGTGAAGTAGTATCATGTGAT 57.639 33.333 0.68 0.68 38.51 3.06
467 714 8.753497 ACTCATAGTGAAGTAGTATCATGTGA 57.247 34.615 0.00 0.00 0.00 3.58
469 716 8.788806 GCTACTCATAGTGAAGTAGTATCATGT 58.211 37.037 10.32 0.00 34.06 3.21
470 717 8.240682 GGCTACTCATAGTGAAGTAGTATCATG 58.759 40.741 10.32 0.00 34.06 3.07
471 718 8.167392 AGGCTACTCATAGTGAAGTAGTATCAT 58.833 37.037 10.32 0.00 34.06 2.45
472 719 7.519057 AGGCTACTCATAGTGAAGTAGTATCA 58.481 38.462 10.32 0.00 34.06 2.15
473 720 7.989416 AGGCTACTCATAGTGAAGTAGTATC 57.011 40.000 10.32 3.00 34.06 2.24
474 721 7.989416 GAGGCTACTCATAGTGAAGTAGTAT 57.011 40.000 10.32 1.44 43.41 2.12
489 736 2.482142 CGTGGAATTCCTGAGGCTACTC 60.482 54.545 24.73 0.00 44.23 2.59
490 737 1.482593 CGTGGAATTCCTGAGGCTACT 59.517 52.381 24.73 0.00 36.82 2.57
491 738 1.207329 ACGTGGAATTCCTGAGGCTAC 59.793 52.381 24.73 11.78 36.82 3.58
492 739 1.568504 ACGTGGAATTCCTGAGGCTA 58.431 50.000 24.73 0.00 36.82 3.93
493 740 1.568504 TACGTGGAATTCCTGAGGCT 58.431 50.000 24.73 5.01 36.82 4.58
494 741 2.158957 TCATACGTGGAATTCCTGAGGC 60.159 50.000 24.73 9.20 36.82 4.70
495 742 3.819564 TCATACGTGGAATTCCTGAGG 57.180 47.619 24.73 13.51 36.82 3.86
496 743 5.292101 GTCTTTCATACGTGGAATTCCTGAG 59.708 44.000 24.73 17.13 36.82 3.35
497 744 5.046591 AGTCTTTCATACGTGGAATTCCTGA 60.047 40.000 24.73 16.34 36.82 3.86
498 745 5.178797 AGTCTTTCATACGTGGAATTCCTG 58.821 41.667 24.73 18.69 36.82 3.86
549 796 2.489722 TGCAGCATTTACATTTACCGCA 59.510 40.909 0.00 0.00 0.00 5.69
574 823 0.876342 GCGTCGGGATCAGTTCATCC 60.876 60.000 0.00 0.00 41.74 3.51
710 960 5.133941 TGGGATGGCGTATAAATAAAAGCA 58.866 37.500 0.00 0.00 0.00 3.91
839 1097 2.264794 GCTCCGGGTGTCGTGATT 59.735 61.111 0.00 0.00 37.11 2.57
900 1158 1.056700 GGGGGATAGAGGAGCTGCAA 61.057 60.000 8.35 0.00 0.00 4.08
958 1216 1.448013 GGAGGAAAGAGGCGGTTCG 60.448 63.158 0.00 0.00 0.00 3.95
970 1228 3.452786 CCGCAGCTCGAGGAGGAA 61.453 66.667 15.58 0.00 41.67 3.36
986 1244 3.969250 TTCATCCGCGAGCAACCCC 62.969 63.158 8.23 0.00 0.00 4.95
987 1245 2.435938 TTCATCCGCGAGCAACCC 60.436 61.111 8.23 0.00 0.00 4.11
988 1246 3.093278 CTTCATCCGCGAGCAACC 58.907 61.111 8.23 0.00 0.00 3.77
989 1247 2.401195 GCTTCATCCGCGAGCAAC 59.599 61.111 8.23 0.00 36.45 4.17
1057 1315 0.582005 CTTCCGCGGCAGCTATAAAC 59.418 55.000 23.51 0.00 42.32 2.01
1058 1316 0.462375 TCTTCCGCGGCAGCTATAAA 59.538 50.000 23.51 5.79 42.32 1.40
1059 1317 0.032130 CTCTTCCGCGGCAGCTATAA 59.968 55.000 23.51 6.64 42.32 0.98
1060 1318 0.822121 TCTCTTCCGCGGCAGCTATA 60.822 55.000 23.51 1.28 42.32 1.31
1061 1319 1.467678 ATCTCTTCCGCGGCAGCTAT 61.468 55.000 23.51 12.98 42.32 2.97
1063 1321 3.438017 GATCTCTTCCGCGGCAGCT 62.438 63.158 23.51 7.50 42.32 4.24
1064 1322 2.964389 GATCTCTTCCGCGGCAGC 60.964 66.667 23.51 1.67 40.74 5.25
1065 1323 1.299773 GAGATCTCTTCCGCGGCAG 60.300 63.158 23.51 21.34 0.00 4.85
1066 1324 2.786495 GGAGATCTCTTCCGCGGCA 61.786 63.158 23.51 9.50 0.00 5.69
1067 1325 2.028337 GGAGATCTCTTCCGCGGC 59.972 66.667 23.51 4.02 0.00 6.53
1068 1326 1.801309 GAGGGAGATCTCTTCCGCGG 61.801 65.000 22.12 22.12 46.64 6.46
1069 1327 0.821711 AGAGGGAGATCTCTTCCGCG 60.822 60.000 21.81 0.00 46.64 6.46
1070 1328 0.673437 CAGAGGGAGATCTCTTCCGC 59.327 60.000 21.81 16.38 46.64 5.54
1071 1329 2.065899 ACAGAGGGAGATCTCTTCCG 57.934 55.000 21.81 14.04 46.64 4.30
1072 1330 4.835284 AAAACAGAGGGAGATCTCTTCC 57.165 45.455 21.81 15.26 41.76 3.46
1073 1331 4.940654 CCAAAAACAGAGGGAGATCTCTTC 59.059 45.833 21.81 18.23 41.76 2.87
1074 1332 4.352298 ACCAAAAACAGAGGGAGATCTCTT 59.648 41.667 21.81 10.94 41.76 2.85
1075 1333 3.913163 ACCAAAAACAGAGGGAGATCTCT 59.087 43.478 21.81 3.23 44.25 3.10
1110 1368 4.225042 AGGAGTACATACCAACATCAAGCA 59.775 41.667 0.00 0.00 0.00 3.91
1121 1379 6.598850 GCTATGTAGGAGTAGGAGTACATACC 59.401 46.154 0.00 0.00 37.33 2.73
1135 1393 5.392487 CGATGATGGTACTGCTATGTAGGAG 60.392 48.000 6.98 6.98 45.88 3.69
1136 1394 4.459337 CGATGATGGTACTGCTATGTAGGA 59.541 45.833 0.00 0.00 0.00 2.94
1137 1395 4.738124 CGATGATGGTACTGCTATGTAGG 58.262 47.826 0.00 0.00 0.00 3.18
1138 1396 4.082517 AGCGATGATGGTACTGCTATGTAG 60.083 45.833 0.00 0.00 0.00 2.74
1139 1397 3.826729 AGCGATGATGGTACTGCTATGTA 59.173 43.478 0.00 0.00 0.00 2.29
1140 1398 2.630098 AGCGATGATGGTACTGCTATGT 59.370 45.455 0.00 0.00 0.00 2.29
1141 1399 3.309961 AGCGATGATGGTACTGCTATG 57.690 47.619 0.00 0.00 0.00 2.23
1142 1400 4.342862 AAAGCGATGATGGTACTGCTAT 57.657 40.909 0.00 0.00 31.41 2.97
1143 1401 3.819564 AAAGCGATGATGGTACTGCTA 57.180 42.857 0.00 0.00 31.41 3.49
1144 1402 2.679837 CAAAAGCGATGATGGTACTGCT 59.320 45.455 0.00 0.00 0.00 4.24
1145 1403 2.677836 TCAAAAGCGATGATGGTACTGC 59.322 45.455 0.00 0.00 0.00 4.40
1146 1404 3.242543 GCTCAAAAGCGATGATGGTACTG 60.243 47.826 0.00 0.00 39.10 2.74
1147 1405 2.939103 GCTCAAAAGCGATGATGGTACT 59.061 45.455 0.00 0.00 39.10 2.73
1178 1436 0.377203 GGCACATACTTTGCGCTACC 59.623 55.000 9.73 0.00 41.18 3.18
1224 1487 7.369803 ACGCAAATGGAATATGTCATAGATC 57.630 36.000 0.00 0.09 0.00 2.75
1230 1493 3.526534 TCGACGCAAATGGAATATGTCA 58.473 40.909 0.00 0.00 0.00 3.58
1231 1494 3.604772 GCTCGACGCAAATGGAATATGTC 60.605 47.826 0.00 0.00 38.92 3.06
1298 1561 4.339814 TGCATACATACATACTGTCGGACA 59.660 41.667 10.88 10.88 0.00 4.02
1299 1562 4.866921 TGCATACATACATACTGTCGGAC 58.133 43.478 0.00 0.00 0.00 4.79
1300 1563 4.583073 ACTGCATACATACATACTGTCGGA 59.417 41.667 0.00 0.00 0.00 4.55
1301 1564 4.871513 ACTGCATACATACATACTGTCGG 58.128 43.478 0.00 0.00 0.00 4.79
1302 1565 5.399596 GTGACTGCATACATACATACTGTCG 59.600 44.000 0.00 0.00 0.00 4.35
1303 1566 5.692204 GGTGACTGCATACATACATACTGTC 59.308 44.000 0.00 0.00 0.00 3.51
1310 1573 3.270027 GCAAGGTGACTGCATACATACA 58.730 45.455 0.00 0.00 42.68 2.29
1315 1578 3.504863 CAAATGCAAGGTGACTGCATAC 58.495 45.455 11.92 0.00 46.94 2.39
1382 1646 2.915869 AGTTCCCACACCTAATCCTCA 58.084 47.619 0.00 0.00 0.00 3.86
1383 1649 3.388350 CCTAGTTCCCACACCTAATCCTC 59.612 52.174 0.00 0.00 0.00 3.71
1389 1655 2.005350 TCTCCCTAGTTCCCACACCTA 58.995 52.381 0.00 0.00 0.00 3.08
1391 1657 1.196012 CTCTCCCTAGTTCCCACACC 58.804 60.000 0.00 0.00 0.00 4.16
1397 1667 1.340795 TGTCCGTCTCTCCCTAGTTCC 60.341 57.143 0.00 0.00 0.00 3.62
1399 1669 1.836802 GTGTCCGTCTCTCCCTAGTT 58.163 55.000 0.00 0.00 0.00 2.24
1432 1703 1.607178 CTCCCCTGCAACATGCCAA 60.607 57.895 0.00 0.00 44.23 4.52
1483 1759 2.511373 TGCTCCATGTAAGCCGCG 60.511 61.111 13.13 0.00 39.05 6.46
1489 1765 0.457853 GCTCGTCGTGCTCCATGTAA 60.458 55.000 11.84 0.00 0.00 2.41
1732 2008 0.514691 CGAGCTGCTTTGTCTTCCAC 59.485 55.000 2.53 0.00 0.00 4.02
1848 2124 3.751246 GCGGCAGCAATGGAGCAA 61.751 61.111 3.18 0.00 44.35 3.91
1871 2150 0.579630 CACGCGTGTCAAACAGCTAA 59.420 50.000 30.50 0.00 0.00 3.09
1889 2168 2.741985 CATCAAGCGACGTGGCCA 60.742 61.111 19.50 0.00 0.00 5.36
1930 2211 0.855349 GCTCATGTATCTGAACGCGG 59.145 55.000 12.47 0.00 0.00 6.46
1957 2238 0.962356 CCGGCTTGATGGACAGCTTT 60.962 55.000 0.00 0.00 0.00 3.51
2057 2338 4.003788 CCCGTCCTTGCAGACCGT 62.004 66.667 0.86 0.00 32.91 4.83
2152 2433 2.828549 GCGCCGAACCCCATGAAT 60.829 61.111 0.00 0.00 0.00 2.57
2644 2957 9.158233 CTTTTTACACCATCGATTAAACCTAGA 57.842 33.333 0.00 0.00 0.00 2.43
2645 2958 8.943002 ACTTTTTACACCATCGATTAAACCTAG 58.057 33.333 0.00 0.00 0.00 3.02
2646 2959 8.851541 ACTTTTTACACCATCGATTAAACCTA 57.148 30.769 0.00 0.00 0.00 3.08
2647 2960 7.754851 ACTTTTTACACCATCGATTAAACCT 57.245 32.000 0.00 0.00 0.00 3.50
2648 2961 7.148869 GCAACTTTTTACACCATCGATTAAACC 60.149 37.037 0.00 0.00 0.00 3.27
2720 3034 5.515797 AATGTTACGATCAGCTAGCAGTA 57.484 39.130 18.83 9.79 0.00 2.74
2782 3096 2.351276 GTCCCTCCATTGGCGTGT 59.649 61.111 0.00 0.00 0.00 4.49
2830 3144 4.577096 TGGTACAATGAATCCCTATCCCT 58.423 43.478 0.00 0.00 31.92 4.20
2876 3205 4.152402 GCGATGTCTGAAGCAAGTTAGAAA 59.848 41.667 0.00 0.00 0.00 2.52
2899 3228 2.180204 GGGCGACGGATCACCAATG 61.180 63.158 0.00 0.00 35.59 2.82
2921 3251 2.871133 CAGACGGCAATTGTACTACGA 58.129 47.619 7.40 0.00 0.00 3.43
2923 3253 1.323534 CGCAGACGGCAATTGTACTAC 59.676 52.381 7.40 0.00 45.17 2.73
2925 3255 2.456000 CGCAGACGGCAATTGTACT 58.544 52.632 7.40 0.00 45.17 2.73
2941 3271 5.607119 TGTGAAGAAGAAAATTCTACCGC 57.393 39.130 0.00 0.00 36.28 5.68
2953 3283 5.583061 TGTTAAAAGACGCTTGTGAAGAAGA 59.417 36.000 0.00 0.00 0.00 2.87
2954 3284 5.806286 TGTTAAAAGACGCTTGTGAAGAAG 58.194 37.500 0.00 0.00 0.00 2.85
2956 3286 5.565695 GTTGTTAAAAGACGCTTGTGAAGA 58.434 37.500 0.00 0.00 0.00 2.87
2957 3287 4.433304 CGTTGTTAAAAGACGCTTGTGAAG 59.567 41.667 0.00 0.00 0.00 3.02
2978 3309 2.602257 TCGATGAATTCAGATGGCGT 57.398 45.000 14.54 0.00 0.00 5.68
3050 3464 8.591312 CAGTTTTACCAAATGTGTTTACTGTTG 58.409 33.333 0.00 0.00 0.00 3.33
3060 3474 6.312426 TGCAACTTTCAGTTTTACCAAATGTG 59.688 34.615 0.00 0.00 36.03 3.21
3061 3475 6.402222 TGCAACTTTCAGTTTTACCAAATGT 58.598 32.000 0.00 0.00 36.03 2.71
3062 3476 6.900568 TGCAACTTTCAGTTTTACCAAATG 57.099 33.333 0.00 0.00 36.03 2.32
3063 3477 7.271511 TGATGCAACTTTCAGTTTTACCAAAT 58.728 30.769 0.00 0.00 36.03 2.32
3064 3478 6.634805 TGATGCAACTTTCAGTTTTACCAAA 58.365 32.000 0.00 0.00 36.03 3.28
3065 3479 6.214191 TGATGCAACTTTCAGTTTTACCAA 57.786 33.333 0.00 0.00 36.03 3.67
3066 3480 5.843673 TGATGCAACTTTCAGTTTTACCA 57.156 34.783 0.00 0.00 36.03 3.25
3067 3481 6.146021 CCATTGATGCAACTTTCAGTTTTACC 59.854 38.462 0.00 0.00 36.03 2.85
3068 3482 6.701400 ACCATTGATGCAACTTTCAGTTTTAC 59.299 34.615 0.00 0.00 36.03 2.01
3069 3483 6.815089 ACCATTGATGCAACTTTCAGTTTTA 58.185 32.000 0.00 0.00 36.03 1.52
3070 3484 5.673514 ACCATTGATGCAACTTTCAGTTTT 58.326 33.333 0.00 0.00 36.03 2.43
3071 3485 5.280654 ACCATTGATGCAACTTTCAGTTT 57.719 34.783 0.00 0.00 36.03 2.66
3072 3486 4.942761 ACCATTGATGCAACTTTCAGTT 57.057 36.364 0.00 0.00 39.39 3.16
3073 3487 4.942761 AACCATTGATGCAACTTTCAGT 57.057 36.364 0.00 0.00 0.00 3.41
3074 3488 5.754406 TCAAAACCATTGATGCAACTTTCAG 59.246 36.000 0.00 0.00 0.00 3.02
3075 3489 5.668471 TCAAAACCATTGATGCAACTTTCA 58.332 33.333 0.00 0.00 0.00 2.69
3076 3490 6.601741 TTCAAAACCATTGATGCAACTTTC 57.398 33.333 0.00 0.00 0.00 2.62
3077 3491 6.998968 TTTCAAAACCATTGATGCAACTTT 57.001 29.167 0.00 0.00 0.00 2.66
3078 3492 6.038492 CCTTTTCAAAACCATTGATGCAACTT 59.962 34.615 0.00 0.00 0.00 2.66
3079 3493 5.528320 CCTTTTCAAAACCATTGATGCAACT 59.472 36.000 0.00 0.00 0.00 3.16
3080 3494 5.750650 CCTTTTCAAAACCATTGATGCAAC 58.249 37.500 0.00 0.00 0.00 4.17
3081 3495 4.275443 GCCTTTTCAAAACCATTGATGCAA 59.725 37.500 0.00 0.00 0.00 4.08
3082 3496 3.814283 GCCTTTTCAAAACCATTGATGCA 59.186 39.130 0.00 0.00 0.00 3.96
3083 3497 3.189080 GGCCTTTTCAAAACCATTGATGC 59.811 43.478 0.00 0.00 0.00 3.91
3084 3498 3.432933 CGGCCTTTTCAAAACCATTGATG 59.567 43.478 0.00 0.00 0.00 3.07
3085 3499 3.663025 CGGCCTTTTCAAAACCATTGAT 58.337 40.909 0.00 0.00 0.00 2.57
3086 3500 2.804933 GCGGCCTTTTCAAAACCATTGA 60.805 45.455 0.00 0.00 0.00 2.57
3087 3501 1.530720 GCGGCCTTTTCAAAACCATTG 59.469 47.619 0.00 0.00 0.00 2.82
3088 3502 1.139853 TGCGGCCTTTTCAAAACCATT 59.860 42.857 0.00 0.00 0.00 3.16
3089 3503 0.755686 TGCGGCCTTTTCAAAACCAT 59.244 45.000 0.00 0.00 0.00 3.55
3090 3504 0.755686 ATGCGGCCTTTTCAAAACCA 59.244 45.000 0.00 0.00 0.00 3.67
3091 3505 2.288518 TGTATGCGGCCTTTTCAAAACC 60.289 45.455 0.00 0.00 0.00 3.27
3092 3506 3.019933 TGTATGCGGCCTTTTCAAAAC 57.980 42.857 0.00 0.00 0.00 2.43
3093 3507 3.951775 ATGTATGCGGCCTTTTCAAAA 57.048 38.095 0.00 0.00 0.00 2.44
3094 3508 3.951775 AATGTATGCGGCCTTTTCAAA 57.048 38.095 0.00 0.00 0.00 2.69
3095 3509 3.583806 CAAATGTATGCGGCCTTTTCAA 58.416 40.909 0.00 0.00 0.00 2.69
3096 3510 2.094286 CCAAATGTATGCGGCCTTTTCA 60.094 45.455 0.00 0.00 0.00 2.69
3097 3511 2.094234 ACCAAATGTATGCGGCCTTTTC 60.094 45.455 0.00 0.00 0.00 2.29
3098 3512 1.899142 ACCAAATGTATGCGGCCTTTT 59.101 42.857 0.00 0.00 0.00 2.27
3099 3513 1.555967 ACCAAATGTATGCGGCCTTT 58.444 45.000 0.00 0.00 0.00 3.11
3100 3514 2.428544 TACCAAATGTATGCGGCCTT 57.571 45.000 0.00 0.00 0.00 4.35
3101 3515 2.428544 TTACCAAATGTATGCGGCCT 57.571 45.000 0.00 0.00 0.00 5.19
3102 3516 3.119280 AGTTTTACCAAATGTATGCGGCC 60.119 43.478 0.00 0.00 0.00 6.13
3103 3517 3.857093 CAGTTTTACCAAATGTATGCGGC 59.143 43.478 0.00 0.00 0.00 6.53
3104 3518 5.303747 TCAGTTTTACCAAATGTATGCGG 57.696 39.130 0.00 0.00 0.00 5.69
3105 3519 6.861055 ACTTTCAGTTTTACCAAATGTATGCG 59.139 34.615 0.00 0.00 0.00 4.73
3106 3520 8.487176 CAACTTTCAGTTTTACCAAATGTATGC 58.513 33.333 0.00 0.00 36.03 3.14
3107 3521 8.487176 GCAACTTTCAGTTTTACCAAATGTATG 58.513 33.333 0.00 0.00 36.03 2.39
3108 3522 7.381139 CGCAACTTTCAGTTTTACCAAATGTAT 59.619 33.333 0.00 0.00 36.03 2.29
3109 3523 6.693545 CGCAACTTTCAGTTTTACCAAATGTA 59.306 34.615 0.00 0.00 36.03 2.29
3110 3524 5.518487 CGCAACTTTCAGTTTTACCAAATGT 59.482 36.000 0.00 0.00 36.03 2.71
3111 3525 5.518487 ACGCAACTTTCAGTTTTACCAAATG 59.482 36.000 0.00 0.00 36.03 2.32
3112 3526 5.656480 ACGCAACTTTCAGTTTTACCAAAT 58.344 33.333 0.00 0.00 36.03 2.32
3113 3527 5.061920 ACGCAACTTTCAGTTTTACCAAA 57.938 34.783 0.00 0.00 36.03 3.28
3114 3528 4.156190 TGACGCAACTTTCAGTTTTACCAA 59.844 37.500 0.00 0.00 36.03 3.67
3115 3529 3.690139 TGACGCAACTTTCAGTTTTACCA 59.310 39.130 0.00 0.00 36.03 3.25
3116 3530 4.281525 TGACGCAACTTTCAGTTTTACC 57.718 40.909 0.00 0.00 36.03 2.85
3117 3531 5.173131 CCATTGACGCAACTTTCAGTTTTAC 59.827 40.000 0.00 0.00 36.03 2.01
3118 3532 5.163602 ACCATTGACGCAACTTTCAGTTTTA 60.164 36.000 0.00 0.00 36.03 1.52
3119 3533 4.111916 CCATTGACGCAACTTTCAGTTTT 58.888 39.130 0.00 0.00 36.03 2.43
3120 3534 3.130340 ACCATTGACGCAACTTTCAGTTT 59.870 39.130 0.00 0.00 36.03 2.66
3121 3535 2.687935 ACCATTGACGCAACTTTCAGTT 59.312 40.909 0.00 0.00 39.39 3.16
3122 3536 2.297701 ACCATTGACGCAACTTTCAGT 58.702 42.857 0.00 0.00 0.00 3.41
3123 3537 3.354089 AACCATTGACGCAACTTTCAG 57.646 42.857 0.00 0.00 0.00 3.02
3124 3538 3.791973 AAACCATTGACGCAACTTTCA 57.208 38.095 0.00 0.00 0.00 2.69
3125 3539 4.109050 TCAAAACCATTGACGCAACTTTC 58.891 39.130 0.00 0.00 0.00 2.62
3126 3540 4.116747 TCAAAACCATTGACGCAACTTT 57.883 36.364 0.00 0.00 0.00 2.66
3127 3541 3.791973 TCAAAACCATTGACGCAACTT 57.208 38.095 0.00 0.00 0.00 2.66
3128 3542 3.791973 TTCAAAACCATTGACGCAACT 57.208 38.095 0.00 0.00 0.00 3.16
3129 3543 4.260172 CCTTTTCAAAACCATTGACGCAAC 60.260 41.667 0.00 0.00 0.00 4.17
3130 3544 3.868077 CCTTTTCAAAACCATTGACGCAA 59.132 39.130 0.00 0.00 0.00 4.85
3131 3545 3.452474 CCTTTTCAAAACCATTGACGCA 58.548 40.909 0.00 0.00 0.00 5.24
3132 3546 2.220824 GCCTTTTCAAAACCATTGACGC 59.779 45.455 0.00 0.00 0.00 5.19
3133 3547 2.799978 GGCCTTTTCAAAACCATTGACG 59.200 45.455 0.00 0.00 0.00 4.35
3134 3548 2.799978 CGGCCTTTTCAAAACCATTGAC 59.200 45.455 0.00 0.00 0.00 3.18
3135 3549 2.804933 GCGGCCTTTTCAAAACCATTGA 60.805 45.455 0.00 0.00 0.00 2.57
3136 3550 1.530720 GCGGCCTTTTCAAAACCATTG 59.469 47.619 0.00 0.00 0.00 2.82
3137 3551 1.139853 TGCGGCCTTTTCAAAACCATT 59.860 42.857 0.00 0.00 0.00 3.16
3138 3552 0.755686 TGCGGCCTTTTCAAAACCAT 59.244 45.000 0.00 0.00 0.00 3.55
3139 3553 0.755686 ATGCGGCCTTTTCAAAACCA 59.244 45.000 0.00 0.00 0.00 3.67
3140 3554 2.288518 TGTATGCGGCCTTTTCAAAACC 60.289 45.455 0.00 0.00 0.00 3.27
3141 3555 3.019933 TGTATGCGGCCTTTTCAAAAC 57.980 42.857 0.00 0.00 0.00 2.43
3142 3556 3.951775 ATGTATGCGGCCTTTTCAAAA 57.048 38.095 0.00 0.00 0.00 2.44
3143 3557 3.951775 AATGTATGCGGCCTTTTCAAA 57.048 38.095 0.00 0.00 0.00 2.69
3144 3558 3.583806 CAAATGTATGCGGCCTTTTCAA 58.416 40.909 0.00 0.00 0.00 2.69
3145 3559 2.094286 CCAAATGTATGCGGCCTTTTCA 60.094 45.455 0.00 0.00 0.00 2.69
3146 3560 2.094234 ACCAAATGTATGCGGCCTTTTC 60.094 45.455 0.00 0.00 0.00 2.29
3147 3561 1.899142 ACCAAATGTATGCGGCCTTTT 59.101 42.857 0.00 0.00 0.00 2.27
3148 3562 1.555967 ACCAAATGTATGCGGCCTTT 58.444 45.000 0.00 0.00 0.00 3.11
3149 3563 2.428544 TACCAAATGTATGCGGCCTT 57.571 45.000 0.00 0.00 0.00 4.35
3150 3564 2.428544 TTACCAAATGTATGCGGCCT 57.571 45.000 0.00 0.00 0.00 5.19
3151 3565 3.119280 AGTTTTACCAAATGTATGCGGCC 60.119 43.478 0.00 0.00 0.00 6.13
3152 3566 3.857093 CAGTTTTACCAAATGTATGCGGC 59.143 43.478 0.00 0.00 0.00 6.53
3153 3567 5.303747 TCAGTTTTACCAAATGTATGCGG 57.696 39.130 0.00 0.00 0.00 5.69
3154 3568 6.861055 ACTTTCAGTTTTACCAAATGTATGCG 59.139 34.615 0.00 0.00 0.00 4.73
3155 3569 8.487176 CAACTTTCAGTTTTACCAAATGTATGC 58.513 33.333 0.00 0.00 36.03 3.14
3156 3570 8.487176 GCAACTTTCAGTTTTACCAAATGTATG 58.513 33.333 0.00 0.00 36.03 2.39
3157 3571 8.200792 TGCAACTTTCAGTTTTACCAAATGTAT 58.799 29.630 0.00 0.00 36.03 2.29
3196 3610 1.899142 ACCAAATGTATGCGGCCTTTT 59.101 42.857 0.00 0.00 0.00 2.27
3197 3611 1.555967 ACCAAATGTATGCGGCCTTT 58.444 45.000 0.00 0.00 0.00 3.11
3198 3612 2.428544 TACCAAATGTATGCGGCCTT 57.571 45.000 0.00 0.00 0.00 4.35
3199 3613 2.428544 TTACCAAATGTATGCGGCCT 57.571 45.000 0.00 0.00 0.00 5.19
3200 3614 3.183754 GTTTTACCAAATGTATGCGGCC 58.816 45.455 0.00 0.00 0.00 6.13
3201 3615 3.183754 GGTTTTACCAAATGTATGCGGC 58.816 45.455 0.00 0.00 38.42 6.53
3202 3616 3.127203 TCGGTTTTACCAAATGTATGCGG 59.873 43.478 0.00 0.00 38.47 5.69
3203 3617 4.343811 TCGGTTTTACCAAATGTATGCG 57.656 40.909 0.00 0.00 38.47 4.73
3204 3618 6.153756 ACTTTCGGTTTTACCAAATGTATGC 58.846 36.000 0.00 0.00 38.47 3.14
3205 3619 7.358848 GCAACTTTCGGTTTTACCAAATGTATG 60.359 37.037 0.00 0.00 38.47 2.39
3206 3620 6.643360 GCAACTTTCGGTTTTACCAAATGTAT 59.357 34.615 0.00 0.00 38.47 2.29
3207 3621 5.978322 GCAACTTTCGGTTTTACCAAATGTA 59.022 36.000 0.00 0.00 38.47 2.29
3208 3622 4.806775 GCAACTTTCGGTTTTACCAAATGT 59.193 37.500 0.00 0.00 38.47 2.71
3209 3623 4.806247 TGCAACTTTCGGTTTTACCAAATG 59.194 37.500 0.00 0.00 38.47 2.32
3210 3624 5.012328 TGCAACTTTCGGTTTTACCAAAT 57.988 34.783 0.00 0.00 38.47 2.32
3211 3625 4.451629 TGCAACTTTCGGTTTTACCAAA 57.548 36.364 0.00 0.00 38.47 3.28
3212 3626 4.098044 TGATGCAACTTTCGGTTTTACCAA 59.902 37.500 0.00 0.00 38.47 3.67
3213 3627 3.632604 TGATGCAACTTTCGGTTTTACCA 59.367 39.130 0.00 0.00 38.47 3.25
3214 3628 4.231718 TGATGCAACTTTCGGTTTTACC 57.768 40.909 0.00 0.00 35.74 2.85
3215 3629 4.145756 CGTTGATGCAACTTTCGGTTTTAC 59.854 41.667 8.46 0.00 41.62 2.01
3216 3630 4.283678 CGTTGATGCAACTTTCGGTTTTA 58.716 39.130 8.46 0.00 41.62 1.52
3217 3631 3.112580 CGTTGATGCAACTTTCGGTTTT 58.887 40.909 8.46 0.00 41.62 2.43
3218 3632 2.542824 CCGTTGATGCAACTTTCGGTTT 60.543 45.455 13.36 0.00 41.62 3.27
3219 3633 1.001815 CCGTTGATGCAACTTTCGGTT 60.002 47.619 13.36 0.00 41.62 4.44
3220 3634 0.591170 CCGTTGATGCAACTTTCGGT 59.409 50.000 13.36 0.00 41.62 4.69
3221 3635 0.591170 ACCGTTGATGCAACTTTCGG 59.409 50.000 17.46 17.46 41.62 4.30
3222 3636 2.399396 AACCGTTGATGCAACTTTCG 57.601 45.000 8.46 0.00 41.62 3.46
3223 3637 4.109050 TCAAAACCGTTGATGCAACTTTC 58.891 39.130 8.46 0.00 41.62 2.62
3224 3638 4.116747 TCAAAACCGTTGATGCAACTTT 57.883 36.364 8.46 1.34 41.62 2.66
3225 3639 3.791973 TCAAAACCGTTGATGCAACTT 57.208 38.095 8.46 0.00 41.62 2.66
3226 3640 3.791973 TTCAAAACCGTTGATGCAACT 57.208 38.095 8.46 0.00 41.62 3.16
3227 3641 4.260172 CCTTTTCAAAACCGTTGATGCAAC 60.260 41.667 0.00 0.00 40.54 4.17
3228 3642 3.868077 CCTTTTCAAAACCGTTGATGCAA 59.132 39.130 0.00 0.00 0.00 4.08
3229 3643 3.452474 CCTTTTCAAAACCGTTGATGCA 58.548 40.909 0.00 0.00 0.00 3.96
3230 3644 2.220824 GCCTTTTCAAAACCGTTGATGC 59.779 45.455 0.00 0.00 0.00 3.91
3231 3645 2.799978 GGCCTTTTCAAAACCGTTGATG 59.200 45.455 0.00 0.00 0.00 3.07
3232 3646 2.544903 CGGCCTTTTCAAAACCGTTGAT 60.545 45.455 0.00 0.00 39.05 2.57
3233 3647 1.202313 CGGCCTTTTCAAAACCGTTGA 60.202 47.619 0.00 0.00 39.05 3.18
3234 3648 1.204792 CGGCCTTTTCAAAACCGTTG 58.795 50.000 0.00 0.00 39.05 4.10
3235 3649 0.528901 GCGGCCTTTTCAAAACCGTT 60.529 50.000 12.17 0.00 45.53 4.44
3236 3650 1.066752 GCGGCCTTTTCAAAACCGT 59.933 52.632 12.17 0.00 45.53 4.83
3237 3651 0.319469 ATGCGGCCTTTTCAAAACCG 60.319 50.000 7.41 7.41 46.50 4.44
3238 3652 2.288518 TGTATGCGGCCTTTTCAAAACC 60.289 45.455 0.00 0.00 0.00 3.27
3239 3653 3.019933 TGTATGCGGCCTTTTCAAAAC 57.980 42.857 0.00 0.00 0.00 2.43
3240 3654 3.951775 ATGTATGCGGCCTTTTCAAAA 57.048 38.095 0.00 0.00 0.00 2.44
3241 3655 3.951775 AATGTATGCGGCCTTTTCAAA 57.048 38.095 0.00 0.00 0.00 2.69
3242 3656 3.583806 CAAATGTATGCGGCCTTTTCAA 58.416 40.909 0.00 0.00 0.00 2.69
3243 3657 2.094286 CCAAATGTATGCGGCCTTTTCA 60.094 45.455 0.00 0.00 0.00 2.69
3244 3658 2.094234 ACCAAATGTATGCGGCCTTTTC 60.094 45.455 0.00 0.00 0.00 2.29
3245 3659 1.899142 ACCAAATGTATGCGGCCTTTT 59.101 42.857 0.00 0.00 0.00 2.27
3246 3660 1.555967 ACCAAATGTATGCGGCCTTT 58.444 45.000 0.00 0.00 0.00 3.11
3247 3661 2.428544 TACCAAATGTATGCGGCCTT 57.571 45.000 0.00 0.00 0.00 4.35
3248 3662 2.428544 TTACCAAATGTATGCGGCCT 57.571 45.000 0.00 0.00 0.00 5.19
3249 3663 3.119280 AGTTTTACCAAATGTATGCGGCC 60.119 43.478 0.00 0.00 0.00 6.13
3250 3664 3.857093 CAGTTTTACCAAATGTATGCGGC 59.143 43.478 0.00 0.00 0.00 6.53
3251 3665 5.303747 TCAGTTTTACCAAATGTATGCGG 57.696 39.130 0.00 0.00 0.00 5.69
3252 3666 6.861055 ACTTTCAGTTTTACCAAATGTATGCG 59.139 34.615 0.00 0.00 0.00 4.73
3253 3667 8.487176 CAACTTTCAGTTTTACCAAATGTATGC 58.513 33.333 0.00 0.00 36.03 3.14
3254 3668 8.487176 GCAACTTTCAGTTTTACCAAATGTATG 58.513 33.333 0.00 0.00 36.03 2.39
3255 3669 8.200792 TGCAACTTTCAGTTTTACCAAATGTAT 58.799 29.630 0.00 0.00 36.03 2.29
3256 3670 7.548097 TGCAACTTTCAGTTTTACCAAATGTA 58.452 30.769 0.00 0.00 36.03 2.29
3257 3671 6.402222 TGCAACTTTCAGTTTTACCAAATGT 58.598 32.000 0.00 0.00 36.03 2.71
3258 3672 6.900568 TGCAACTTTCAGTTTTACCAAATG 57.099 33.333 0.00 0.00 36.03 2.32
3259 3673 7.271511 TGATGCAACTTTCAGTTTTACCAAAT 58.728 30.769 0.00 0.00 36.03 2.32
3260 3674 6.634805 TGATGCAACTTTCAGTTTTACCAAA 58.365 32.000 0.00 0.00 36.03 3.28
3261 3675 6.214191 TGATGCAACTTTCAGTTTTACCAA 57.786 33.333 0.00 0.00 36.03 3.67
3262 3676 5.843673 TGATGCAACTTTCAGTTTTACCA 57.156 34.783 0.00 0.00 36.03 3.25
3263 3677 6.146021 CCATTGATGCAACTTTCAGTTTTACC 59.854 38.462 0.00 0.00 36.03 2.85
3264 3678 6.701400 ACCATTGATGCAACTTTCAGTTTTAC 59.299 34.615 0.00 0.00 36.03 2.01
3265 3679 6.815089 ACCATTGATGCAACTTTCAGTTTTA 58.185 32.000 0.00 0.00 36.03 1.52
3266 3680 5.673514 ACCATTGATGCAACTTTCAGTTTT 58.326 33.333 0.00 0.00 36.03 2.43
3267 3681 5.280654 ACCATTGATGCAACTTTCAGTTT 57.719 34.783 0.00 0.00 36.03 2.66
3268 3682 4.942761 ACCATTGATGCAACTTTCAGTT 57.057 36.364 0.00 0.00 39.39 3.16
3269 3683 4.942761 AACCATTGATGCAACTTTCAGT 57.057 36.364 0.00 0.00 0.00 3.41
3270 3684 5.754406 TCAAAACCATTGATGCAACTTTCAG 59.246 36.000 0.00 0.00 0.00 3.02
3271 3685 5.668471 TCAAAACCATTGATGCAACTTTCA 58.332 33.333 0.00 0.00 0.00 2.69
3272 3686 6.601741 TTCAAAACCATTGATGCAACTTTC 57.398 33.333 0.00 0.00 0.00 2.62
3273 3687 6.998968 TTTCAAAACCATTGATGCAACTTT 57.001 29.167 0.00 0.00 0.00 2.66
3274 3688 6.038492 CCTTTTCAAAACCATTGATGCAACTT 59.962 34.615 0.00 0.00 0.00 2.66
3275 3689 5.528320 CCTTTTCAAAACCATTGATGCAACT 59.472 36.000 0.00 0.00 0.00 3.16
3276 3690 5.750650 CCTTTTCAAAACCATTGATGCAAC 58.249 37.500 0.00 0.00 0.00 4.17
3277 3691 4.275443 GCCTTTTCAAAACCATTGATGCAA 59.725 37.500 0.00 0.00 0.00 4.08
3278 3692 3.814283 GCCTTTTCAAAACCATTGATGCA 59.186 39.130 0.00 0.00 0.00 3.96
3279 3693 3.189080 GGCCTTTTCAAAACCATTGATGC 59.811 43.478 0.00 0.00 0.00 3.91
3280 3694 3.432933 CGGCCTTTTCAAAACCATTGATG 59.567 43.478 0.00 0.00 0.00 3.07
3281 3695 3.663025 CGGCCTTTTCAAAACCATTGAT 58.337 40.909 0.00 0.00 0.00 2.57
3282 3696 2.804933 GCGGCCTTTTCAAAACCATTGA 60.805 45.455 0.00 0.00 0.00 2.57
3283 3697 1.530720 GCGGCCTTTTCAAAACCATTG 59.469 47.619 0.00 0.00 0.00 2.82
3284 3698 1.139853 TGCGGCCTTTTCAAAACCATT 59.860 42.857 0.00 0.00 0.00 3.16
3285 3699 0.755686 TGCGGCCTTTTCAAAACCAT 59.244 45.000 0.00 0.00 0.00 3.55
3286 3700 0.755686 ATGCGGCCTTTTCAAAACCA 59.244 45.000 0.00 0.00 0.00 3.67
3287 3701 1.147473 CATGCGGCCTTTTCAAAACC 58.853 50.000 0.00 0.00 0.00 3.27
3288 3702 2.147436 TCATGCGGCCTTTTCAAAAC 57.853 45.000 0.00 0.00 0.00 2.43
3289 3703 2.612471 CCATCATGCGGCCTTTTCAAAA 60.612 45.455 0.00 0.00 0.00 2.44
3290 3704 1.067000 CCATCATGCGGCCTTTTCAAA 60.067 47.619 0.00 0.00 0.00 2.69
3291 3705 0.531657 CCATCATGCGGCCTTTTCAA 59.468 50.000 0.00 0.00 0.00 2.69
3292 3706 1.321805 CCCATCATGCGGCCTTTTCA 61.322 55.000 0.00 0.00 0.00 2.69
3293 3707 1.037030 TCCCATCATGCGGCCTTTTC 61.037 55.000 0.00 0.00 0.00 2.29
3334 3748 3.782992 AGCCATCCAAAAATCTTGACCT 58.217 40.909 0.00 0.00 0.00 3.85
3336 3750 5.649831 AGAGTAGCCATCCAAAAATCTTGAC 59.350 40.000 0.00 0.00 0.00 3.18
3413 3827 4.680237 CGAGGGCAAGCGGTGTCA 62.680 66.667 0.00 0.00 31.37 3.58
3417 3831 4.250305 ACAACGAGGGCAAGCGGT 62.250 61.111 0.00 0.00 0.00 5.68
3419 3833 2.034879 ATGACAACGAGGGCAAGCG 61.035 57.895 0.00 0.00 0.00 4.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.