Multiple sequence alignment - TraesCS4B01G302700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G302700 chr4B 100.000 3212 0 0 2986 6197 589801735 589804946 0.000000e+00 5932.0
1 TraesCS4B01G302700 chr4B 100.000 2533 0 0 1 2533 589798750 589801282 0.000000e+00 4678.0
2 TraesCS4B01G302700 chr4B 86.689 293 38 1 5508 5799 589809238 589809530 2.150000e-84 324.0
3 TraesCS4B01G302700 chr4B 82.759 377 31 18 5832 6197 589809612 589809965 7.800000e-79 305.0
4 TraesCS4B01G302700 chr4B 100.000 133 0 0 3114 3246 589801150 589801282 4.800000e-61 246.0
5 TraesCS4B01G302700 chr4B 100.000 133 0 0 2401 2533 589801863 589801995 4.800000e-61 246.0
6 TraesCS4B01G302700 chr4B 93.023 129 7 1 567 695 52869804 52869930 2.950000e-43 187.0
7 TraesCS4B01G302700 chr4B 98.413 63 0 1 2986 3048 589801104 589801165 6.570000e-20 110.0
8 TraesCS4B01G302700 chr4B 98.413 63 0 1 2355 2416 589801735 589801797 6.570000e-20 110.0
9 TraesCS4B01G302700 chr4B 100.000 44 0 0 2387 2430 589801179 589801136 1.430000e-11 82.4
10 TraesCS4B01G302700 chr4B 78.400 125 16 7 5921 6044 590051569 590051683 3.100000e-08 71.3
11 TraesCS4B01G302700 chr4A 94.276 2673 101 26 3141 5792 2042134 2039493 0.000000e+00 4041.0
12 TraesCS4B01G302700 chr4A 95.226 1571 64 7 824 2389 2043772 2042208 0.000000e+00 2475.0
13 TraesCS4B01G302700 chr4A 94.056 572 28 2 1 566 2044363 2043792 0.000000e+00 863.0
14 TraesCS4B01G302700 chr4A 90.374 374 23 6 5832 6197 2039399 2039031 4.350000e-131 479.0
15 TraesCS4B01G302700 chr4A 82.913 357 28 15 5832 6176 2011357 2011022 2.190000e-74 291.0
16 TraesCS4B01G302700 chr4A 97.170 106 3 0 2428 2533 2042134 2042029 4.940000e-41 180.0
17 TraesCS4B01G302700 chr4A 91.837 98 8 0 3175 3272 663172165 663172068 3.010000e-28 137.0
18 TraesCS4B01G302700 chr4A 94.444 72 4 0 2462 2533 663172165 663172094 1.830000e-20 111.0
19 TraesCS4B01G302700 chr4D 94.398 2267 98 13 3189 5442 469428413 469430663 0.000000e+00 3456.0
20 TraesCS4B01G302700 chr4D 95.386 1712 57 10 689 2389 469426214 469427914 0.000000e+00 2704.0
21 TraesCS4B01G302700 chr4D 87.879 363 28 7 5843 6197 469431256 469431610 4.470000e-111 412.0
22 TraesCS4B01G302700 chr4D 87.584 298 37 0 5508 5805 469436405 469436702 4.600000e-91 346.0
23 TraesCS4B01G302700 chr4D 83.554 377 28 15 5832 6197 469436778 469437131 7.750000e-84 322.0
24 TraesCS4B01G302700 chr4D 90.000 140 10 3 567 706 114329221 114329086 1.780000e-40 178.0
25 TraesCS4B01G302700 chr4D 98.529 68 1 0 2428 2495 469427988 469428055 3.030000e-23 121.0
26 TraesCS4B01G302700 chr4D 98.529 68 1 0 3141 3208 469427988 469428055 3.030000e-23 121.0
27 TraesCS4B01G302700 chr4D 80.769 130 15 6 5916 6044 469497306 469497426 6.610000e-15 93.5
28 TraesCS4B01G302700 chr4D 94.828 58 2 1 2476 2533 469428413 469428469 8.560000e-14 89.8
29 TraesCS4B01G302700 chr4D 100.000 35 0 0 2986 3020 469427880 469427914 1.440000e-06 65.8
30 TraesCS4B01G302700 chr6D 81.937 382 40 10 4729 5100 29264003 29264365 4.700000e-76 296.0
31 TraesCS4B01G302700 chr6D 80.052 381 46 11 4729 5100 29359823 29360182 7.970000e-64 255.0
32 TraesCS4B01G302700 chr6D 93.023 129 7 1 567 695 115044664 115044538 2.950000e-43 187.0
33 TraesCS4B01G302700 chr6D 92.424 132 8 1 564 695 403312267 403312396 2.950000e-43 187.0
34 TraesCS4B01G302700 chr6B 81.208 298 35 8 4768 5063 59103716 59103438 2.910000e-53 220.0
35 TraesCS4B01G302700 chr6B 87.565 193 17 1 4729 4914 58820449 58820257 3.760000e-52 217.0
36 TraesCS4B01G302700 chr6B 79.339 242 29 9 4861 5100 58855856 58855634 3.870000e-32 150.0
37 TraesCS4B01G302700 chr7B 96.694 121 3 1 3027 3146 124022414 124022534 3.790000e-47 200.0
38 TraesCS4B01G302700 chr7B 92.857 140 6 4 3020 3155 480265056 480264917 3.790000e-47 200.0
39 TraesCS4B01G302700 chr7B 90.647 139 9 3 567 704 470313153 470313018 1.370000e-41 182.0
40 TraesCS4B01G302700 chr7A 92.647 136 8 1 560 695 454049091 454048958 1.760000e-45 195.0
41 TraesCS4B01G302700 chr6A 95.161 124 5 1 3019 3141 459514995 459514872 1.760000e-45 195.0
42 TraesCS4B01G302700 chr6A 95.122 41 2 0 2389 2429 491317792 491317832 1.440000e-06 65.8
43 TraesCS4B01G302700 chr6A 95.122 41 2 0 2388 2428 491317832 491317792 1.440000e-06 65.8
44 TraesCS4B01G302700 chr6A 88.462 52 4 2 2377 2428 53830598 53830647 1.870000e-05 62.1
45 TraesCS4B01G302700 chr5A 96.610 118 3 1 3027 3143 577784184 577784067 1.760000e-45 195.0
46 TraesCS4B01G302700 chr5A 93.130 131 7 1 565 695 492896799 492896671 2.280000e-44 191.0
47 TraesCS4B01G302700 chr1B 93.182 132 7 1 564 695 501941738 501941609 6.340000e-45 193.0
48 TraesCS4B01G302700 chr7D 94.355 124 6 1 3019 3141 266610534 266610411 8.200000e-44 189.0
49 TraesCS4B01G302700 chr7D 94.355 124 6 1 3019 3141 306700688 306700811 8.200000e-44 189.0
50 TraesCS4B01G302700 chr7D 95.122 41 2 0 2389 2429 266611246 266611286 1.440000e-06 65.8
51 TraesCS4B01G302700 chr3A 94.355 124 6 1 3019 3141 483674918 483674795 8.200000e-44 189.0
52 TraesCS4B01G302700 chr1D 94.355 124 6 1 3019 3141 168013892 168014015 8.200000e-44 189.0
53 TraesCS4B01G302700 chr1D 94.355 124 6 1 3019 3141 360721912 360722035 8.200000e-44 189.0
54 TraesCS4B01G302700 chr5D 93.023 129 7 1 567 695 558898540 558898414 2.950000e-43 187.0
55 TraesCS4B01G302700 chr1A 95.122 41 2 0 2388 2428 122225331 122225371 1.440000e-06 65.8
56 TraesCS4B01G302700 chr1A 95.122 41 2 0 2389 2429 122225371 122225331 1.440000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G302700 chr4B 589798750 589804946 6196 False 1887.000000 5932 99.471000 1 6197 6 chr4B.!!$F3 6196
1 TraesCS4B01G302700 chr4B 589809238 589809965 727 False 314.500000 324 84.724000 5508 6197 2 chr4B.!!$F4 689
2 TraesCS4B01G302700 chr4A 2039031 2044363 5332 True 1607.600000 4041 94.220400 1 6197 5 chr4A.!!$R2 6196
3 TraesCS4B01G302700 chr4D 469426214 469431610 5396 False 995.657143 3456 95.649857 689 6197 7 chr4D.!!$F2 5508
4 TraesCS4B01G302700 chr4D 469436405 469437131 726 False 334.000000 346 85.569000 5508 6197 2 chr4D.!!$F3 689

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.320697 GGTAGACCAACCTTGCGTCT 59.679 55.0 11.50 11.5 39.91 4.18 F
471 472 0.332972 TGGACTCTGGAGAGCTGCTA 59.667 55.0 0.15 0.0 45.79 3.49 F
2404 2422 0.313672 TTTGGACAATGCTTCGGTGC 59.686 50.0 0.00 0.0 0.00 5.01 F
3143 3572 0.109597 GCACCGAAGCATTGTCCAAG 60.110 55.0 0.00 0.0 0.00 3.61 F
3288 3717 0.394565 ACTCATGCGCCTAATCCCTC 59.605 55.0 4.18 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1325 1339 1.203187 TGGTAGCTGGACTGAACCTCT 60.203 52.381 0.0 0.0 0.00 3.69 R
2411 2429 0.109597 CTTGGACAATGCTTCGGTGC 60.110 55.000 0.0 0.0 0.00 5.01 R
3848 4280 1.651987 ACCATACCGCAATGAAGTCG 58.348 50.000 0.0 0.0 0.00 4.18 R
4672 5116 1.923864 CGAAAACCTGCACAAAACACC 59.076 47.619 0.0 0.0 0.00 4.16 R
5234 5678 1.267121 ACGGGATACAACAGAGCAGT 58.733 50.000 0.0 0.0 39.74 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 0.320697 GGTAGACCAACCTTGCGTCT 59.679 55.000 11.50 11.50 39.91 4.18
38 39 0.738389 CCTTGCGTCTCTCTCTCCTC 59.262 60.000 0.00 0.00 0.00 3.71
177 178 1.595357 GTTCACCCGGATCGGTTCT 59.405 57.895 0.73 0.00 46.80 3.01
190 191 2.184322 GTTCTGCGCCTGATCCGA 59.816 61.111 4.18 0.00 0.00 4.55
290 291 2.505337 CGAAATCGCGTCCGGTCA 60.505 61.111 5.77 0.00 34.56 4.02
291 292 2.089936 CGAAATCGCGTCCGGTCAA 61.090 57.895 5.77 0.00 34.56 3.18
343 344 1.760405 AACCCTTGAGAATCCCCTGT 58.240 50.000 0.00 0.00 0.00 4.00
356 357 3.611025 TCCCCTGTTGGATTTTTCTGT 57.389 42.857 0.00 0.00 35.39 3.41
369 370 7.572814 TGGATTTTTCTGTTCCAAGGATTTTT 58.427 30.769 0.00 0.00 36.62 1.94
384 385 2.632602 TTTTTGCCTGCCTGGTCCGA 62.633 55.000 0.00 0.00 38.35 4.55
440 441 8.526147 ACAAGTTTAGAAACCTAGAGCGTTATA 58.474 33.333 1.52 0.00 39.71 0.98
453 454 6.648725 AGAGCGTTATAGCAACTTAGTTTG 57.351 37.500 0.00 0.00 40.15 2.93
458 459 6.455246 GCGTTATAGCAACTTAGTTTGGACTC 60.455 42.308 0.00 0.00 35.81 3.36
471 472 0.332972 TGGACTCTGGAGAGCTGCTA 59.667 55.000 0.15 0.00 45.79 3.49
472 473 1.063341 TGGACTCTGGAGAGCTGCTAT 60.063 52.381 0.15 0.00 45.79 2.97
474 475 0.752054 ACTCTGGAGAGCTGCTATGC 59.248 55.000 8.95 8.95 45.79 3.14
545 552 1.751927 CTCTTCCCATGGCACCTGC 60.752 63.158 6.09 0.00 41.14 4.85
566 573 3.448660 GCAGGCAGTTTGGGAATAGAAAT 59.551 43.478 0.00 0.00 0.00 2.17
567 574 4.644685 GCAGGCAGTTTGGGAATAGAAATA 59.355 41.667 0.00 0.00 0.00 1.40
568 575 5.450550 GCAGGCAGTTTGGGAATAGAAATAC 60.451 44.000 0.00 0.00 0.00 1.89
569 576 5.888161 CAGGCAGTTTGGGAATAGAAATACT 59.112 40.000 0.00 0.00 0.00 2.12
570 577 6.038714 CAGGCAGTTTGGGAATAGAAATACTC 59.961 42.308 0.00 0.00 0.00 2.59
571 578 5.299531 GGCAGTTTGGGAATAGAAATACTCC 59.700 44.000 0.00 0.00 0.00 3.85
572 579 5.299531 GCAGTTTGGGAATAGAAATACTCCC 59.700 44.000 0.00 0.00 46.77 4.30
573 580 6.663734 CAGTTTGGGAATAGAAATACTCCCT 58.336 40.000 7.48 0.00 46.72 4.20
574 581 6.768381 CAGTTTGGGAATAGAAATACTCCCTC 59.232 42.308 7.48 0.00 46.72 4.30
575 582 5.906772 TTGGGAATAGAAATACTCCCTCC 57.093 43.478 7.48 0.00 46.72 4.30
576 583 3.901844 TGGGAATAGAAATACTCCCTCCG 59.098 47.826 7.48 0.00 46.72 4.63
578 585 4.021280 GGGAATAGAAATACTCCCTCCGTC 60.021 50.000 0.00 0.00 43.74 4.79
579 586 4.833938 GGAATAGAAATACTCCCTCCGTCT 59.166 45.833 0.00 0.00 0.00 4.18
580 587 5.047872 GGAATAGAAATACTCCCTCCGTCTC 60.048 48.000 0.00 0.00 0.00 3.36
581 588 3.383698 AGAAATACTCCCTCCGTCTCA 57.616 47.619 0.00 0.00 0.00 3.27
582 589 3.709587 AGAAATACTCCCTCCGTCTCAA 58.290 45.455 0.00 0.00 0.00 3.02
583 590 4.094476 AGAAATACTCCCTCCGTCTCAAA 58.906 43.478 0.00 0.00 0.00 2.69
584 591 4.530946 AGAAATACTCCCTCCGTCTCAAAA 59.469 41.667 0.00 0.00 0.00 2.44
585 592 5.189934 AGAAATACTCCCTCCGTCTCAAAAT 59.810 40.000 0.00 0.00 0.00 1.82
586 593 5.437191 AATACTCCCTCCGTCTCAAAATT 57.563 39.130 0.00 0.00 0.00 1.82
587 594 3.336138 ACTCCCTCCGTCTCAAAATTC 57.664 47.619 0.00 0.00 0.00 2.17
588 595 2.907042 ACTCCCTCCGTCTCAAAATTCT 59.093 45.455 0.00 0.00 0.00 2.40
589 596 3.328050 ACTCCCTCCGTCTCAAAATTCTT 59.672 43.478 0.00 0.00 0.00 2.52
590 597 3.674997 TCCCTCCGTCTCAAAATTCTTG 58.325 45.455 0.00 0.00 0.00 3.02
591 598 3.072476 TCCCTCCGTCTCAAAATTCTTGT 59.928 43.478 0.00 0.00 0.00 3.16
592 599 3.437049 CCCTCCGTCTCAAAATTCTTGTC 59.563 47.826 0.00 0.00 0.00 3.18
593 600 4.319177 CCTCCGTCTCAAAATTCTTGTCT 58.681 43.478 0.00 0.00 0.00 3.41
594 601 4.757149 CCTCCGTCTCAAAATTCTTGTCTT 59.243 41.667 0.00 0.00 0.00 3.01
595 602 5.932303 CCTCCGTCTCAAAATTCTTGTCTTA 59.068 40.000 0.00 0.00 0.00 2.10
596 603 6.091441 CCTCCGTCTCAAAATTCTTGTCTTAG 59.909 42.308 0.00 0.00 0.00 2.18
597 604 6.755206 TCCGTCTCAAAATTCTTGTCTTAGA 58.245 36.000 0.00 0.00 0.00 2.10
598 605 7.386851 TCCGTCTCAAAATTCTTGTCTTAGAT 58.613 34.615 0.00 0.00 0.00 1.98
599 606 7.878127 TCCGTCTCAAAATTCTTGTCTTAGATT 59.122 33.333 0.00 0.00 0.00 2.40
600 607 8.507249 CCGTCTCAAAATTCTTGTCTTAGATTT 58.493 33.333 0.00 0.00 0.00 2.17
601 608 9.322776 CGTCTCAAAATTCTTGTCTTAGATTTG 57.677 33.333 0.00 0.00 30.65 2.32
669 676 8.234136 ACATCCGTATGTAGACAAATCTAAGA 57.766 34.615 0.00 0.00 44.66 2.10
670 677 8.136165 ACATCCGTATGTAGACAAATCTAAGAC 58.864 37.037 0.00 0.00 44.66 3.01
671 678 7.634671 TCCGTATGTAGACAAATCTAAGACA 57.365 36.000 0.00 0.00 39.20 3.41
672 679 8.058667 TCCGTATGTAGACAAATCTAAGACAA 57.941 34.615 0.00 0.00 39.20 3.18
673 680 8.525316 TCCGTATGTAGACAAATCTAAGACAAA 58.475 33.333 0.00 0.00 39.20 2.83
674 681 9.146984 CCGTATGTAGACAAATCTAAGACAAAA 57.853 33.333 0.00 0.00 39.20 2.44
682 689 9.546428 AGACAAATCTAAGACAAAATTTTTGGG 57.454 29.630 22.27 9.53 31.46 4.12
683 690 9.541143 GACAAATCTAAGACAAAATTTTTGGGA 57.459 29.630 22.27 13.32 0.00 4.37
684 691 9.325198 ACAAATCTAAGACAAAATTTTTGGGAC 57.675 29.630 22.27 14.18 0.00 4.46
685 692 8.487176 CAAATCTAAGACAAAATTTTTGGGACG 58.513 33.333 22.27 9.39 0.00 4.79
686 693 6.079424 TCTAAGACAAAATTTTTGGGACGG 57.921 37.500 22.27 11.44 0.00 4.79
687 694 5.828859 TCTAAGACAAAATTTTTGGGACGGA 59.171 36.000 22.27 13.09 0.00 4.69
688 695 4.584327 AGACAAAATTTTTGGGACGGAG 57.416 40.909 22.27 0.00 0.00 4.63
689 696 3.320826 AGACAAAATTTTTGGGACGGAGG 59.679 43.478 22.27 0.00 0.00 4.30
690 697 2.367241 ACAAAATTTTTGGGACGGAGGG 59.633 45.455 22.27 0.00 0.00 4.30
691 698 2.630580 CAAAATTTTTGGGACGGAGGGA 59.369 45.455 13.04 0.00 0.00 4.20
692 699 2.215942 AATTTTTGGGACGGAGGGAG 57.784 50.000 0.00 0.00 0.00 4.30
757 764 5.121811 ACTGTATGCAGATTTGGTCAGATC 58.878 41.667 18.40 0.00 45.28 2.75
767 774 5.765182 AGATTTGGTCAGATCGTTTCTTTGT 59.235 36.000 0.00 0.00 29.93 2.83
820 828 5.172687 TCTTAATGGTAATGGTGAGCACA 57.827 39.130 2.75 0.00 0.00 4.57
822 830 5.822519 TCTTAATGGTAATGGTGAGCACATC 59.177 40.000 2.75 0.00 0.00 3.06
845 853 5.812642 TCTCTTCCGTATTCTCAGAAAATGC 59.187 40.000 0.00 0.00 0.00 3.56
859 867 4.397103 CAGAAAATGCTAGCATCCTGTCAA 59.603 41.667 29.67 0.00 35.31 3.18
860 868 5.067413 CAGAAAATGCTAGCATCCTGTCAAT 59.933 40.000 29.67 9.53 35.31 2.57
861 869 5.298777 AGAAAATGCTAGCATCCTGTCAATC 59.701 40.000 29.67 17.19 35.31 2.67
862 870 3.851458 ATGCTAGCATCCTGTCAATCA 57.149 42.857 24.67 0.00 29.42 2.57
863 871 2.910199 TGCTAGCATCCTGTCAATCAC 58.090 47.619 14.93 0.00 0.00 3.06
865 873 2.420547 GCTAGCATCCTGTCAATCACCA 60.421 50.000 10.63 0.00 0.00 4.17
957 970 5.715070 TGACGGTTCAAACATTTCAAGTTT 58.285 33.333 0.00 0.00 39.61 2.66
974 987 5.296780 TCAAGTTTACACAGCCTTCTCTTTG 59.703 40.000 0.00 0.00 0.00 2.77
1087 1100 5.703130 GTGGTATTGCCCATTCTTATCTCTC 59.297 44.000 0.00 0.00 36.74 3.20
1134 1148 7.447374 TCTTCCGAAGCAATTTTTCTGAATA 57.553 32.000 3.00 0.00 0.00 1.75
1177 1191 7.873505 GCCTCTCTTCGTAAACCAGATATATTT 59.126 37.037 0.00 0.00 0.00 1.40
1227 1241 1.967779 TCTCATTCTTGTGACCCGACA 59.032 47.619 0.00 0.00 0.00 4.35
1233 1247 3.201353 TCTTGTGACCCGACATTTTCA 57.799 42.857 0.00 0.00 0.00 2.69
1315 1329 7.443879 TGAAATAAGTTGTCAGTTCATGCTACA 59.556 33.333 0.00 0.00 0.00 2.74
1325 1339 7.390162 TGTCAGTTCATGCTACATTATTTGTCA 59.610 33.333 0.00 0.00 39.87 3.58
1429 1443 4.521639 TCATGAATCTGCTCACTTTTGCTT 59.478 37.500 0.00 0.00 0.00 3.91
1441 1455 8.140628 TGCTCACTTTTGCTTCAAAACATTATA 58.859 29.630 1.05 0.00 38.24 0.98
1493 1507 8.070171 CGAACTACTATTTTGCATTTCCTATGG 58.930 37.037 0.00 0.00 0.00 2.74
1600 1614 7.492352 TTTACTTGTCTTGCTTACTTCCTTC 57.508 36.000 0.00 0.00 0.00 3.46
1655 1669 2.725641 CAGCAACAGCAGCAGCAA 59.274 55.556 3.17 0.00 45.49 3.91
1661 1678 1.321805 AACAGCAGCAGCAACAACCA 61.322 50.000 3.17 0.00 45.49 3.67
1870 1887 6.679542 TGAGGGATAAGAGGTACACTATTGA 58.320 40.000 0.00 0.00 31.96 2.57
2175 2192 3.901844 TGATCTTACTATGGGTAGTGGGC 59.098 47.826 0.00 0.00 41.22 5.36
2233 2251 8.673626 AATAATATTGAACAAGCTTTGTGTCG 57.326 30.769 0.00 0.00 44.59 4.35
2237 2255 2.750166 TGAACAAGCTTTGTGTCGGAAA 59.250 40.909 0.00 0.00 44.59 3.13
2241 2259 4.754322 ACAAGCTTTGTGTCGGAAAATTT 58.246 34.783 0.00 0.00 43.48 1.82
2389 2407 4.082081 TGCTGCTTAGACCATCAAATTTGG 60.082 41.667 17.90 5.72 40.26 3.28
2391 2409 5.643379 TGCTTAGACCATCAAATTTGGAC 57.357 39.130 17.90 3.82 37.69 4.02
2392 2410 5.076182 TGCTTAGACCATCAAATTTGGACA 58.924 37.500 17.90 0.00 37.69 4.02
2393 2411 5.538053 TGCTTAGACCATCAAATTTGGACAA 59.462 36.000 17.90 0.00 37.69 3.18
2394 2412 6.211184 TGCTTAGACCATCAAATTTGGACAAT 59.789 34.615 17.90 1.43 37.69 2.71
2395 2413 6.532657 GCTTAGACCATCAAATTTGGACAATG 59.467 38.462 17.90 13.14 37.69 2.82
2397 2415 4.529377 AGACCATCAAATTTGGACAATGCT 59.471 37.500 17.90 2.22 37.69 3.79
2398 2416 5.012354 AGACCATCAAATTTGGACAATGCTT 59.988 36.000 17.90 4.48 37.69 3.91
2399 2417 5.240121 ACCATCAAATTTGGACAATGCTTC 58.760 37.500 17.90 0.00 37.69 3.86
2400 2418 4.327898 CCATCAAATTTGGACAATGCTTCG 59.672 41.667 17.90 0.00 36.26 3.79
2401 2419 3.911868 TCAAATTTGGACAATGCTTCGG 58.088 40.909 17.90 0.00 0.00 4.30
2402 2420 3.320541 TCAAATTTGGACAATGCTTCGGT 59.679 39.130 17.90 0.00 0.00 4.69
2403 2421 3.302365 AATTTGGACAATGCTTCGGTG 57.698 42.857 0.00 0.00 0.00 4.94
2404 2422 0.313672 TTTGGACAATGCTTCGGTGC 59.686 50.000 0.00 0.00 0.00 5.01
2405 2423 1.523154 TTGGACAATGCTTCGGTGCC 61.523 55.000 0.00 0.00 0.00 5.01
2408 2426 1.448985 GACAATGCTTCGGTGCCTTA 58.551 50.000 0.00 0.00 0.00 2.69
2409 2427 1.810151 GACAATGCTTCGGTGCCTTAA 59.190 47.619 0.00 0.00 0.00 1.85
2410 2428 1.812571 ACAATGCTTCGGTGCCTTAAG 59.187 47.619 0.00 0.00 0.00 1.85
2411 2429 1.133025 CAATGCTTCGGTGCCTTAAGG 59.867 52.381 17.81 17.81 38.53 2.69
2424 2442 1.133025 CCTTAAGGCACCGAAGCATTG 59.867 52.381 9.00 0.00 39.09 2.82
2425 2443 1.812571 CTTAAGGCACCGAAGCATTGT 59.187 47.619 8.78 0.00 39.09 2.71
2516 2945 8.662781 ACAACATCGTTTCTACATATGCTATT 57.337 30.769 1.58 0.00 0.00 1.73
2517 2946 9.109393 ACAACATCGTTTCTACATATGCTATTT 57.891 29.630 1.58 0.00 0.00 1.40
3006 3435 3.969117 TTCAGTTGTTGTGCTGCTTAG 57.031 42.857 0.00 0.00 33.09 2.18
3007 3436 3.192541 TCAGTTGTTGTGCTGCTTAGA 57.807 42.857 0.00 0.00 33.09 2.10
3008 3437 2.872245 TCAGTTGTTGTGCTGCTTAGAC 59.128 45.455 0.00 0.00 33.09 2.59
3009 3438 2.031682 CAGTTGTTGTGCTGCTTAGACC 60.032 50.000 0.00 0.00 0.00 3.85
3010 3439 1.946768 GTTGTTGTGCTGCTTAGACCA 59.053 47.619 0.00 0.00 0.00 4.02
3011 3440 2.554032 GTTGTTGTGCTGCTTAGACCAT 59.446 45.455 0.00 0.00 0.00 3.55
3012 3441 2.426522 TGTTGTGCTGCTTAGACCATC 58.573 47.619 0.00 0.00 0.00 3.51
3013 3442 2.224499 TGTTGTGCTGCTTAGACCATCA 60.224 45.455 0.00 0.00 0.00 3.07
3014 3443 2.813754 GTTGTGCTGCTTAGACCATCAA 59.186 45.455 0.00 0.00 0.00 2.57
3015 3444 3.138884 TGTGCTGCTTAGACCATCAAA 57.861 42.857 0.00 0.00 0.00 2.69
3016 3445 3.689347 TGTGCTGCTTAGACCATCAAAT 58.311 40.909 0.00 0.00 0.00 2.32
3017 3446 4.081406 TGTGCTGCTTAGACCATCAAATT 58.919 39.130 0.00 0.00 0.00 1.82
3018 3447 4.523943 TGTGCTGCTTAGACCATCAAATTT 59.476 37.500 0.00 0.00 0.00 1.82
3019 3448 4.860907 GTGCTGCTTAGACCATCAAATTTG 59.139 41.667 12.15 12.15 0.00 2.32
3020 3449 4.082081 TGCTGCTTAGACCATCAAATTTGG 60.082 41.667 17.90 5.72 40.26 3.28
3021 3450 4.158394 GCTGCTTAGACCATCAAATTTGGA 59.842 41.667 17.90 5.66 37.69 3.53
3022 3451 5.643379 TGCTTAGACCATCAAATTTGGAC 57.357 39.130 17.90 3.82 37.69 4.02
3023 3452 5.076182 TGCTTAGACCATCAAATTTGGACA 58.924 37.500 17.90 0.00 37.69 4.02
3024 3453 5.538053 TGCTTAGACCATCAAATTTGGACAA 59.462 36.000 17.90 0.00 37.69 3.18
3025 3454 6.211184 TGCTTAGACCATCAAATTTGGACAAT 59.789 34.615 17.90 1.43 37.69 2.71
3026 3455 6.532657 GCTTAGACCATCAAATTTGGACAATG 59.467 38.462 17.90 13.14 37.69 2.82
3027 3456 4.824289 AGACCATCAAATTTGGACAATGC 58.176 39.130 17.90 3.46 37.69 3.56
3028 3457 4.529377 AGACCATCAAATTTGGACAATGCT 59.471 37.500 17.90 2.22 37.69 3.79
3029 3458 5.012354 AGACCATCAAATTTGGACAATGCTT 59.988 36.000 17.90 4.48 37.69 3.91
3030 3459 5.240121 ACCATCAAATTTGGACAATGCTTC 58.760 37.500 17.90 0.00 37.69 3.86
3031 3460 4.327898 CCATCAAATTTGGACAATGCTTCG 59.672 41.667 17.90 0.00 36.26 3.79
3032 3461 3.911868 TCAAATTTGGACAATGCTTCGG 58.088 40.909 17.90 0.00 0.00 4.30
3033 3462 3.320541 TCAAATTTGGACAATGCTTCGGT 59.679 39.130 17.90 0.00 0.00 4.69
3034 3463 3.302365 AATTTGGACAATGCTTCGGTG 57.698 42.857 0.00 0.00 0.00 4.94
3035 3464 0.313672 TTTGGACAATGCTTCGGTGC 59.686 50.000 0.00 0.00 0.00 5.01
3036 3465 1.523154 TTGGACAATGCTTCGGTGCC 61.523 55.000 0.00 0.00 0.00 5.01
3037 3466 1.675641 GGACAATGCTTCGGTGCCT 60.676 57.895 0.00 0.00 0.00 4.75
3038 3467 1.244019 GGACAATGCTTCGGTGCCTT 61.244 55.000 0.00 0.00 0.00 4.35
3039 3468 1.448985 GACAATGCTTCGGTGCCTTA 58.551 50.000 0.00 0.00 0.00 2.69
3040 3469 1.810151 GACAATGCTTCGGTGCCTTAA 59.190 47.619 0.00 0.00 0.00 1.85
3041 3470 2.227865 GACAATGCTTCGGTGCCTTAAA 59.772 45.455 0.00 0.00 0.00 1.52
3042 3471 2.228822 ACAATGCTTCGGTGCCTTAAAG 59.771 45.455 0.00 0.00 0.00 1.85
3043 3472 1.463674 ATGCTTCGGTGCCTTAAAGG 58.536 50.000 0.00 0.00 38.80 3.11
3060 3489 2.203480 GCACCTGCCTTTGGGTCA 60.203 61.111 0.00 0.00 32.95 4.02
3061 3490 2.564721 GCACCTGCCTTTGGGTCAC 61.565 63.158 0.00 0.00 32.95 3.67
3062 3491 1.151450 CACCTGCCTTTGGGTCACT 59.849 57.895 0.00 0.00 32.95 3.41
3063 3492 1.151450 ACCTGCCTTTGGGTCACTG 59.849 57.895 0.00 0.00 34.45 3.66
3064 3493 1.352622 ACCTGCCTTTGGGTCACTGA 61.353 55.000 0.00 0.00 34.45 3.41
3065 3494 0.890996 CCTGCCTTTGGGTCACTGAC 60.891 60.000 0.00 0.00 34.45 3.51
3066 3495 0.179020 CTGCCTTTGGGTCACTGACA 60.179 55.000 11.34 0.00 33.68 3.58
3067 3496 0.478072 TGCCTTTGGGTCACTGACAT 59.522 50.000 11.34 0.00 33.68 3.06
3068 3497 0.883833 GCCTTTGGGTCACTGACATG 59.116 55.000 11.34 0.00 33.68 3.21
3069 3498 1.819305 GCCTTTGGGTCACTGACATGT 60.819 52.381 11.34 0.00 33.68 3.21
3070 3499 1.881973 CCTTTGGGTCACTGACATGTG 59.118 52.381 1.15 0.00 39.15 3.21
3071 3500 1.881973 CTTTGGGTCACTGACATGTGG 59.118 52.381 1.15 0.00 38.40 4.17
3072 3501 0.537143 TTGGGTCACTGACATGTGGC 60.537 55.000 1.15 0.00 41.38 5.01
3074 3503 4.798433 GTCACTGACATGTGGCCA 57.202 55.556 1.15 0.00 36.64 5.36
3075 3504 2.548178 GTCACTGACATGTGGCCAG 58.452 57.895 5.11 7.33 36.64 4.85
3076 3505 1.302752 TCACTGACATGTGGCCAGC 60.303 57.895 5.11 1.20 38.40 4.85
3077 3506 2.034687 ACTGACATGTGGCCAGCC 59.965 61.111 5.11 0.38 0.00 4.85
3078 3507 2.034532 CTGACATGTGGCCAGCCA 59.965 61.111 5.11 7.43 45.02 4.75
3094 3523 2.508928 CACCTGTTGGACCCACGT 59.491 61.111 0.00 0.00 37.04 4.49
3095 3524 1.891919 CACCTGTTGGACCCACGTG 60.892 63.158 9.08 9.08 37.04 4.49
3096 3525 2.372074 ACCTGTTGGACCCACGTGT 61.372 57.895 15.65 0.00 37.04 4.49
3097 3526 1.597027 CCTGTTGGACCCACGTGTC 60.597 63.158 15.65 6.19 34.57 3.67
3098 3527 1.145156 CTGTTGGACCCACGTGTCA 59.855 57.895 15.65 4.50 36.97 3.58
3099 3528 0.250295 CTGTTGGACCCACGTGTCAT 60.250 55.000 15.65 0.00 36.97 3.06
3100 3529 1.001520 CTGTTGGACCCACGTGTCATA 59.998 52.381 15.65 0.00 36.97 2.15
3101 3530 1.001520 TGTTGGACCCACGTGTCATAG 59.998 52.381 15.65 0.00 36.97 2.23
3102 3531 1.274167 GTTGGACCCACGTGTCATAGA 59.726 52.381 15.65 0.00 36.97 1.98
3103 3532 0.892755 TGGACCCACGTGTCATAGAC 59.107 55.000 15.65 0.00 36.97 2.59
3104 3533 0.892755 GGACCCACGTGTCATAGACA 59.107 55.000 15.65 0.00 40.50 3.41
3114 3543 3.057969 TGTCATAGACACAAAGGCAGG 57.942 47.619 0.00 0.00 37.67 4.85
3115 3544 2.371841 TGTCATAGACACAAAGGCAGGT 59.628 45.455 0.00 0.00 37.67 4.00
3116 3545 2.744202 GTCATAGACACAAAGGCAGGTG 59.256 50.000 2.29 2.29 40.78 4.00
3117 3546 1.470098 CATAGACACAAAGGCAGGTGC 59.530 52.381 0.00 0.00 38.57 5.01
3134 3563 4.713946 CCTTAAGGCACCGAAGCA 57.286 55.556 9.00 0.00 35.83 3.91
3135 3564 3.175133 CCTTAAGGCACCGAAGCAT 57.825 52.632 9.00 0.00 35.83 3.79
3136 3565 1.463674 CCTTAAGGCACCGAAGCATT 58.536 50.000 9.00 4.53 41.80 3.56
3137 3566 1.133025 CCTTAAGGCACCGAAGCATTG 59.867 52.381 9.00 0.00 39.09 2.82
3138 3567 1.812571 CTTAAGGCACCGAAGCATTGT 59.187 47.619 8.78 0.00 39.09 2.71
3139 3568 1.448985 TAAGGCACCGAAGCATTGTC 58.551 50.000 8.78 0.00 39.09 3.18
3140 3569 1.244019 AAGGCACCGAAGCATTGTCC 61.244 55.000 0.00 0.00 37.11 4.02
3141 3570 1.971167 GGCACCGAAGCATTGTCCA 60.971 57.895 1.64 0.00 35.83 4.02
3142 3571 1.523154 GGCACCGAAGCATTGTCCAA 61.523 55.000 1.64 0.00 35.83 3.53
3143 3572 0.109597 GCACCGAAGCATTGTCCAAG 60.110 55.000 0.00 0.00 0.00 3.61
3144 3573 1.522668 CACCGAAGCATTGTCCAAGA 58.477 50.000 0.00 0.00 0.00 3.02
3145 3574 2.086869 CACCGAAGCATTGTCCAAGAT 58.913 47.619 0.00 0.00 0.00 2.40
3146 3575 3.270027 CACCGAAGCATTGTCCAAGATA 58.730 45.455 0.00 0.00 0.00 1.98
3147 3576 3.879295 CACCGAAGCATTGTCCAAGATAT 59.121 43.478 0.00 0.00 0.00 1.63
3148 3577 4.336433 CACCGAAGCATTGTCCAAGATATT 59.664 41.667 0.00 0.00 0.00 1.28
3149 3578 5.527214 CACCGAAGCATTGTCCAAGATATTA 59.473 40.000 0.00 0.00 0.00 0.98
3150 3579 6.205464 CACCGAAGCATTGTCCAAGATATTAT 59.795 38.462 0.00 0.00 0.00 1.28
3151 3580 6.772716 ACCGAAGCATTGTCCAAGATATTATT 59.227 34.615 0.00 0.00 0.00 1.40
3152 3581 7.936847 ACCGAAGCATTGTCCAAGATATTATTA 59.063 33.333 0.00 0.00 0.00 0.98
3153 3582 8.950210 CCGAAGCATTGTCCAAGATATTATTAT 58.050 33.333 0.00 0.00 0.00 1.28
3154 3583 9.764870 CGAAGCATTGTCCAAGATATTATTATG 57.235 33.333 0.00 0.00 0.00 1.90
3156 3585 8.059798 AGCATTGTCCAAGATATTATTATGGC 57.940 34.615 0.00 0.00 0.00 4.40
3157 3586 7.670979 AGCATTGTCCAAGATATTATTATGGCA 59.329 33.333 0.00 0.00 0.00 4.92
3158 3587 7.756722 GCATTGTCCAAGATATTATTATGGCAC 59.243 37.037 0.00 5.04 0.00 5.01
3159 3588 9.017509 CATTGTCCAAGATATTATTATGGCACT 57.982 33.333 0.00 0.00 0.00 4.40
3160 3589 8.995027 TTGTCCAAGATATTATTATGGCACTT 57.005 30.769 0.00 0.00 0.00 3.16
3161 3590 8.394971 TGTCCAAGATATTATTATGGCACTTG 57.605 34.615 0.00 0.00 35.01 3.16
3162 3591 7.040478 TGTCCAAGATATTATTATGGCACTTGC 60.040 37.037 0.00 0.00 41.14 4.01
3163 3592 7.175641 GTCCAAGATATTATTATGGCACTTGCT 59.824 37.037 0.38 0.00 41.70 3.91
3164 3593 7.175467 TCCAAGATATTATTATGGCACTTGCTG 59.825 37.037 0.38 0.00 41.70 4.41
3165 3594 7.310664 CAAGATATTATTATGGCACTTGCTGG 58.689 38.462 0.38 0.00 41.70 4.85
3166 3595 6.782986 AGATATTATTATGGCACTTGCTGGA 58.217 36.000 0.38 0.00 41.70 3.86
3167 3596 6.656693 AGATATTATTATGGCACTTGCTGGAC 59.343 38.462 0.38 0.00 41.70 4.02
3168 3597 2.512692 ATTATGGCACTTGCTGGACA 57.487 45.000 0.38 0.00 41.70 4.02
3169 3598 2.284754 TTATGGCACTTGCTGGACAA 57.715 45.000 0.38 0.00 41.70 3.18
3170 3599 2.284754 TATGGCACTTGCTGGACAAA 57.715 45.000 0.38 0.00 37.96 2.83
3171 3600 0.675633 ATGGCACTTGCTGGACAAAC 59.324 50.000 0.38 0.00 37.96 2.93
3172 3601 1.363807 GGCACTTGCTGGACAAACC 59.636 57.895 0.38 0.00 37.96 3.27
3173 3602 1.363807 GCACTTGCTGGACAAACCC 59.636 57.895 0.00 0.00 37.96 4.11
3174 3603 1.391157 GCACTTGCTGGACAAACCCA 61.391 55.000 0.00 0.00 37.96 4.51
3175 3604 1.110442 CACTTGCTGGACAAACCCAA 58.890 50.000 0.00 0.00 37.96 4.12
3176 3605 1.480137 CACTTGCTGGACAAACCCAAA 59.520 47.619 0.00 0.00 37.96 3.28
3177 3606 2.102925 CACTTGCTGGACAAACCCAAAT 59.897 45.455 0.00 0.00 37.96 2.32
3178 3607 2.771372 ACTTGCTGGACAAACCCAAATT 59.229 40.909 0.00 0.00 37.96 1.82
3179 3608 3.199727 ACTTGCTGGACAAACCCAAATTT 59.800 39.130 0.00 0.00 37.96 1.82
3180 3609 3.191078 TGCTGGACAAACCCAAATTTG 57.809 42.857 11.40 11.40 43.81 2.32
3181 3610 2.768527 TGCTGGACAAACCCAAATTTGA 59.231 40.909 19.86 0.00 41.28 2.69
3182 3611 3.390639 TGCTGGACAAACCCAAATTTGAT 59.609 39.130 19.86 4.46 41.28 2.57
3183 3612 4.141528 TGCTGGACAAACCCAAATTTGATT 60.142 37.500 19.86 10.36 41.28 2.57
3184 3613 4.821260 GCTGGACAAACCCAAATTTGATTT 59.179 37.500 19.86 15.32 41.28 2.17
3185 3614 5.277925 GCTGGACAAACCCAAATTTGATTTG 60.278 40.000 28.28 28.28 46.98 2.32
3186 3615 5.749462 TGGACAAACCCAAATTTGATTTGT 58.251 33.333 31.97 31.97 46.22 2.83
3187 3616 6.183347 TGGACAAACCCAAATTTGATTTGTT 58.817 32.000 31.96 23.32 46.22 2.83
3188 3617 6.094603 TGGACAAACCCAAATTTGATTTGTTG 59.905 34.615 31.96 23.33 46.22 3.33
3189 3618 6.094742 GGACAAACCCAAATTTGATTTGTTGT 59.905 34.615 31.96 25.21 46.22 3.32
3190 3619 7.362487 GGACAAACCCAAATTTGATTTGTTGTT 60.362 33.333 31.96 20.60 46.22 2.83
3191 3620 7.890515 ACAAACCCAAATTTGATTTGTTGTTT 58.109 26.923 29.13 18.86 46.22 2.83
3192 3621 8.363390 ACAAACCCAAATTTGATTTGTTGTTTT 58.637 25.926 29.13 16.64 46.22 2.43
3193 3622 8.645487 CAAACCCAAATTTGATTTGTTGTTTTG 58.355 29.630 25.01 13.87 46.22 2.44
3194 3623 7.459795 ACCCAAATTTGATTTGTTGTTTTGT 57.540 28.000 19.86 0.00 46.22 2.83
3195 3624 8.567285 ACCCAAATTTGATTTGTTGTTTTGTA 57.433 26.923 19.86 0.00 46.22 2.41
3196 3625 9.183368 ACCCAAATTTGATTTGTTGTTTTGTAT 57.817 25.926 19.86 0.00 46.22 2.29
3201 3630 9.934190 AATTTGATTTGTTGTTTTGTATTGAGC 57.066 25.926 0.00 0.00 0.00 4.26
3202 3631 8.484641 TTTGATTTGTTGTTTTGTATTGAGCA 57.515 26.923 0.00 0.00 0.00 4.26
3203 3632 7.697352 TGATTTGTTGTTTTGTATTGAGCAG 57.303 32.000 0.00 0.00 0.00 4.24
3204 3633 7.487484 TGATTTGTTGTTTTGTATTGAGCAGA 58.513 30.769 0.00 0.00 0.00 4.26
3205 3634 7.434897 TGATTTGTTGTTTTGTATTGAGCAGAC 59.565 33.333 0.00 0.00 0.00 3.51
3206 3635 5.826601 TGTTGTTTTGTATTGAGCAGACA 57.173 34.783 0.00 0.00 0.00 3.41
3207 3636 6.201226 TGTTGTTTTGTATTGAGCAGACAA 57.799 33.333 0.00 0.00 0.00 3.18
3208 3637 6.033341 TGTTGTTTTGTATTGAGCAGACAAC 58.967 36.000 8.58 8.58 40.70 3.32
3209 3638 5.826601 TGTTTTGTATTGAGCAGACAACA 57.173 34.783 0.00 0.00 32.98 3.33
3210 3639 6.389830 TGTTTTGTATTGAGCAGACAACAT 57.610 33.333 0.00 0.00 32.98 2.71
3211 3640 6.437928 TGTTTTGTATTGAGCAGACAACATC 58.562 36.000 0.00 0.00 32.98 3.06
3212 3641 4.926860 TTGTATTGAGCAGACAACATCG 57.073 40.909 0.00 0.00 32.50 3.84
3213 3642 3.925379 TGTATTGAGCAGACAACATCGT 58.075 40.909 0.00 0.00 32.50 3.73
3214 3643 4.314961 TGTATTGAGCAGACAACATCGTT 58.685 39.130 0.00 0.00 32.50 3.85
3215 3644 4.754618 TGTATTGAGCAGACAACATCGTTT 59.245 37.500 0.00 0.00 32.50 3.60
3216 3645 3.878086 TTGAGCAGACAACATCGTTTC 57.122 42.857 0.00 0.00 0.00 2.78
3217 3646 3.111853 TGAGCAGACAACATCGTTTCT 57.888 42.857 0.00 0.00 0.00 2.52
3218 3647 4.251543 TGAGCAGACAACATCGTTTCTA 57.748 40.909 0.00 0.00 0.00 2.10
3219 3648 3.987868 TGAGCAGACAACATCGTTTCTAC 59.012 43.478 0.00 0.00 0.00 2.59
3220 3649 3.987868 GAGCAGACAACATCGTTTCTACA 59.012 43.478 0.00 0.00 0.00 2.74
3221 3650 4.569943 AGCAGACAACATCGTTTCTACAT 58.430 39.130 0.00 0.00 0.00 2.29
3222 3651 5.720202 AGCAGACAACATCGTTTCTACATA 58.280 37.500 0.00 0.00 0.00 2.29
3223 3652 6.341316 AGCAGACAACATCGTTTCTACATAT 58.659 36.000 0.00 0.00 0.00 1.78
3224 3653 6.256539 AGCAGACAACATCGTTTCTACATATG 59.743 38.462 0.00 0.00 0.00 1.78
3225 3654 6.414079 CAGACAACATCGTTTCTACATATGC 58.586 40.000 1.58 0.00 0.00 3.14
3226 3655 6.256539 CAGACAACATCGTTTCTACATATGCT 59.743 38.462 1.58 0.00 0.00 3.79
3227 3656 7.435192 CAGACAACATCGTTTCTACATATGCTA 59.565 37.037 1.58 0.00 0.00 3.49
3228 3657 8.144478 AGACAACATCGTTTCTACATATGCTAT 58.856 33.333 1.58 0.00 0.00 2.97
3288 3717 0.394565 ACTCATGCGCCTAATCCCTC 59.605 55.000 4.18 0.00 0.00 4.30
3325 3755 3.231965 CATGCTCTTTTTCACTTCAGCG 58.768 45.455 0.00 0.00 0.00 5.18
3370 3800 5.056480 CGGGCATGACTCTATTTTACATCA 58.944 41.667 0.00 0.00 0.00 3.07
3463 3893 9.915629 GAACGATTATGTAGGTTGATTCTAGAT 57.084 33.333 0.00 0.00 0.00 1.98
3501 3931 8.256611 TGAATTACTGATGAGTAGAAAACAGC 57.743 34.615 0.00 0.00 36.03 4.40
3656 4088 9.187996 CCATTATATGGTGATGGTTATGCATAA 57.812 33.333 15.21 15.21 45.54 1.90
3667 4099 8.361889 TGATGGTTATGCATAATTTCTGGAATG 58.638 33.333 21.52 0.00 0.00 2.67
3819 4251 2.816087 ACAATGTAAGTCTTGCTGCTGG 59.184 45.455 0.00 0.00 0.00 4.85
3897 4329 6.338146 TGGTTGTTCTACATGATAGCTACAC 58.662 40.000 0.00 0.00 0.00 2.90
3898 4330 5.753921 GGTTGTTCTACATGATAGCTACACC 59.246 44.000 0.00 6.53 0.00 4.16
3921 4353 6.431234 ACCTATTTTTCTGCTGTTGGTTCTAG 59.569 38.462 0.00 0.00 0.00 2.43
3963 4395 1.992557 TGCTAAGAATGGTTCCCCTGT 59.007 47.619 0.00 0.00 0.00 4.00
3964 4396 2.378547 TGCTAAGAATGGTTCCCCTGTT 59.621 45.455 0.00 0.00 0.00 3.16
3965 4397 3.181423 TGCTAAGAATGGTTCCCCTGTTT 60.181 43.478 0.00 0.00 0.00 2.83
4122 4562 6.959639 TCAATTAAATGGGATGAGCCTTAC 57.040 37.500 0.00 0.00 36.66 2.34
4126 4566 2.736670 ATGGGATGAGCCTTACCAAC 57.263 50.000 0.00 0.00 34.45 3.77
4170 4610 7.118390 GCTGACACATGTTCTTAAGTAGTTCAT 59.882 37.037 0.00 0.00 0.00 2.57
4287 4728 8.759481 TTGCCAATAGATATACCACATTGAAA 57.241 30.769 0.00 0.00 0.00 2.69
4685 5129 3.876914 TCTTACTCTGGTGTTTTGTGCAG 59.123 43.478 0.00 0.00 0.00 4.41
4780 5224 7.918033 CAGTGTACTATAATCAGAACCACAGAG 59.082 40.741 0.00 0.00 0.00 3.35
4885 5329 2.654987 GACAAGCTGCAAAGTAAGTGC 58.345 47.619 1.02 0.00 42.55 4.40
4932 5376 0.865111 CGATGTCGTGCTTGGTTTCA 59.135 50.000 0.00 0.00 34.11 2.69
5234 5678 0.458370 CATCGTCTGTCGTGGCATCA 60.458 55.000 0.00 0.00 40.80 3.07
5263 5707 1.153025 GTATCCCGTTCCTTGCCCC 60.153 63.158 0.00 0.00 0.00 5.80
5308 5752 4.202060 ACTGAGGTCGCATGTATAGTCTTG 60.202 45.833 0.00 0.00 0.00 3.02
5335 5779 4.188462 TGACTTCACGGGCATAATTACAG 58.812 43.478 0.00 0.00 0.00 2.74
5384 5828 0.250858 TGCCATGGTTGTGGAGTCAG 60.251 55.000 14.67 0.00 42.02 3.51
5413 5858 9.319143 GAACAAGCTGAGCTCTTCTTTTATATA 57.681 33.333 16.19 0.00 38.25 0.86
5483 5932 3.064820 GCCATCGGTCGTATGTGAAATTT 59.935 43.478 0.00 0.00 0.00 1.82
5490 5939 5.910166 CGGTCGTATGTGAAATTTTGAACAA 59.090 36.000 6.44 0.00 0.00 2.83
5523 5972 8.619146 ATTGAATTGCACTGTTTATGAATACG 57.381 30.769 0.00 0.00 0.00 3.06
5532 5981 8.225107 GCACTGTTTATGAATACGTTGAAACTA 58.775 33.333 0.00 0.00 0.00 2.24
5542 5991 7.710044 TGAATACGTTGAAACTAAGGTGTTGTA 59.290 33.333 0.00 0.00 32.50 2.41
5637 6086 4.072131 GGAACATGACCTCAAGCAACTAA 58.928 43.478 0.00 0.00 0.00 2.24
5679 6136 3.697439 TTGCCCTGTCCGCCTATGC 62.697 63.158 0.00 0.00 0.00 3.14
5688 6145 0.462581 TCCGCCTATGCAAGCTTCAG 60.463 55.000 0.00 0.00 37.32 3.02
5754 6358 4.170468 AGTGAGAACTTGATTTGGGTGT 57.830 40.909 0.00 0.00 0.00 4.16
5774 6378 4.023963 GTGTAAGTCTGAAAACTTGCCTCC 60.024 45.833 0.00 0.00 40.05 4.30
5799 6404 3.370978 AGCCATTGAATCTACAACGAACG 59.629 43.478 0.00 0.00 32.50 3.95
5829 6498 6.149474 CCAGGTAGAGGTAAACAATGTTCAAG 59.851 42.308 0.00 0.00 0.00 3.02
5836 6505 5.897250 AGGTAAACAATGTTCAAGAGGGTTT 59.103 36.000 0.00 0.00 0.00 3.27
5837 6506 6.040504 AGGTAAACAATGTTCAAGAGGGTTTC 59.959 38.462 0.00 0.00 0.00 2.78
5838 6507 6.040504 GGTAAACAATGTTCAAGAGGGTTTCT 59.959 38.462 0.00 0.00 37.93 2.52
5839 6508 5.520376 AACAATGTTCAAGAGGGTTTCTG 57.480 39.130 0.00 0.00 35.91 3.02
5841 6510 3.884037 ATGTTCAAGAGGGTTTCTGGT 57.116 42.857 0.00 0.00 35.91 4.00
5847 6532 2.880890 CAAGAGGGTTTCTGGTCTGTTG 59.119 50.000 0.00 0.00 35.91 3.33
5856 6541 0.250858 CTGGTCTGTTGCCCATCACA 60.251 55.000 0.00 0.00 0.00 3.58
5910 6599 3.838903 GGAGTTTCCAGGTAGAAGAAGGA 59.161 47.826 0.00 0.00 36.28 3.36
5911 6600 4.471747 GGAGTTTCCAGGTAGAAGAAGGAT 59.528 45.833 0.00 0.00 36.28 3.24
5912 6601 5.661759 GGAGTTTCCAGGTAGAAGAAGGATA 59.338 44.000 0.00 0.00 36.28 2.59
5981 6670 9.756571 CCTAGATACACTATTACTAGTCCCATT 57.243 37.037 0.00 0.00 35.99 3.16
6034 6728 2.742372 CGCAGGCGCTTGTTAGGT 60.742 61.111 21.36 0.00 35.30 3.08
6084 6781 0.036483 TTGCATTGACTAGCGGCTGA 60.036 50.000 13.86 0.00 0.00 4.26
6087 6784 1.293924 CATTGACTAGCGGCTGAAGG 58.706 55.000 13.86 2.81 0.00 3.46
6190 6887 1.852942 GCGTCGAGCCAATAAGATCA 58.147 50.000 0.00 0.00 40.81 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.243736 GGAGGAAGGAAGAGGAGAGAGA 59.756 54.545 0.00 0.00 0.00 3.10
38 39 2.843113 ACTGATTCTGGGAGGAAGGAAG 59.157 50.000 0.00 0.00 0.00 3.46
134 135 2.481104 GGAGGAGAGAGCGATCAAGTTG 60.481 54.545 2.38 0.00 0.00 3.16
141 142 1.228124 CGAGGGAGGAGAGAGCGAT 60.228 63.158 0.00 0.00 0.00 4.58
177 178 2.108976 GGAATCGGATCAGGCGCA 59.891 61.111 10.83 0.00 0.00 6.09
190 191 2.421739 CCCGGATCGAAGCGGAAT 59.578 61.111 0.73 0.00 32.50 3.01
290 291 1.110518 ACGCCCACCGGAAAACAATT 61.111 50.000 9.46 0.00 42.52 2.32
291 292 1.520600 GACGCCCACCGGAAAACAAT 61.521 55.000 9.46 0.00 42.52 2.71
348 349 5.588246 GGCAAAAATCCTTGGAACAGAAAAA 59.412 36.000 0.00 0.00 42.39 1.94
356 357 1.347378 GGCAGGCAAAAATCCTTGGAA 59.653 47.619 0.00 0.00 0.00 3.53
411 412 7.212274 ACGCTCTAGGTTTCTAAACTTGTAAA 58.788 34.615 5.62 0.00 38.89 2.01
440 441 3.391296 TCCAGAGTCCAAACTAAGTTGCT 59.609 43.478 0.00 0.00 35.28 3.91
453 454 1.340889 CATAGCAGCTCTCCAGAGTCC 59.659 57.143 0.00 0.00 43.85 3.85
458 459 1.514003 CATGCATAGCAGCTCTCCAG 58.486 55.000 0.00 0.00 43.65 3.86
471 472 2.191513 CCAGCCTAAGCGCATGCAT 61.192 57.895 19.57 5.66 46.67 3.96
472 473 2.825387 CCAGCCTAAGCGCATGCA 60.825 61.111 19.57 0.00 46.67 3.96
474 475 1.315257 AAACCCAGCCTAAGCGCATG 61.315 55.000 11.47 0.00 46.67 4.06
519 526 2.092753 TGCCATGGGAAGAGAAGTCATC 60.093 50.000 15.13 0.00 0.00 2.92
523 530 0.329596 GGTGCCATGGGAAGAGAAGT 59.670 55.000 15.13 0.00 0.00 3.01
545 552 5.888161 AGTATTTCTATTCCCAAACTGCCTG 59.112 40.000 0.00 0.00 0.00 4.85
566 573 4.094476 AGAATTTTGAGACGGAGGGAGTA 58.906 43.478 0.00 0.00 0.00 2.59
567 574 2.907042 AGAATTTTGAGACGGAGGGAGT 59.093 45.455 0.00 0.00 0.00 3.85
568 575 3.618690 AGAATTTTGAGACGGAGGGAG 57.381 47.619 0.00 0.00 0.00 4.30
569 576 3.072476 ACAAGAATTTTGAGACGGAGGGA 59.928 43.478 7.18 0.00 0.00 4.20
570 577 3.412386 ACAAGAATTTTGAGACGGAGGG 58.588 45.455 7.18 0.00 0.00 4.30
571 578 4.319177 AGACAAGAATTTTGAGACGGAGG 58.681 43.478 7.18 0.00 0.00 4.30
572 579 5.931441 AAGACAAGAATTTTGAGACGGAG 57.069 39.130 7.18 0.00 0.00 4.63
573 580 6.755206 TCTAAGACAAGAATTTTGAGACGGA 58.245 36.000 7.18 0.00 0.00 4.69
574 581 7.602517 ATCTAAGACAAGAATTTTGAGACGG 57.397 36.000 7.18 0.00 0.00 4.79
575 582 9.322776 CAAATCTAAGACAAGAATTTTGAGACG 57.677 33.333 7.18 0.00 31.51 4.18
632 639 9.783081 TCTACATACGGATGTATCTAACACTAA 57.217 33.333 20.64 0.00 45.42 2.24
633 640 9.212641 GTCTACATACGGATGTATCTAACACTA 57.787 37.037 20.64 0.00 45.42 2.74
634 641 7.718314 TGTCTACATACGGATGTATCTAACACT 59.282 37.037 20.64 0.00 45.42 3.55
635 642 7.868775 TGTCTACATACGGATGTATCTAACAC 58.131 38.462 20.64 10.81 45.42 3.32
636 643 8.454570 TTGTCTACATACGGATGTATCTAACA 57.545 34.615 20.64 17.64 45.42 2.41
637 644 9.909644 ATTTGTCTACATACGGATGTATCTAAC 57.090 33.333 20.64 15.62 45.42 2.34
639 646 9.516546 AGATTTGTCTACATACGGATGTATCTA 57.483 33.333 20.64 11.01 45.42 1.98
640 647 8.410673 AGATTTGTCTACATACGGATGTATCT 57.589 34.615 20.64 16.58 45.42 1.98
643 650 9.346005 TCTTAGATTTGTCTACATACGGATGTA 57.654 33.333 19.32 19.32 44.77 2.29
645 652 8.135529 TGTCTTAGATTTGTCTACATACGGATG 58.864 37.037 5.94 5.94 39.16 3.51
646 653 8.234136 TGTCTTAGATTTGTCTACATACGGAT 57.766 34.615 0.00 0.00 0.00 4.18
647 654 7.634671 TGTCTTAGATTTGTCTACATACGGA 57.365 36.000 0.00 0.00 0.00 4.69
648 655 8.697846 TTTGTCTTAGATTTGTCTACATACGG 57.302 34.615 0.00 0.00 0.00 4.02
656 663 9.546428 CCCAAAAATTTTGTCTTAGATTTGTCT 57.454 29.630 16.15 0.00 0.00 3.41
657 664 9.541143 TCCCAAAAATTTTGTCTTAGATTTGTC 57.459 29.630 16.15 0.00 0.00 3.18
658 665 9.325198 GTCCCAAAAATTTTGTCTTAGATTTGT 57.675 29.630 16.15 0.00 0.00 2.83
659 666 8.487176 CGTCCCAAAAATTTTGTCTTAGATTTG 58.513 33.333 16.15 0.00 0.00 2.32
660 667 7.655732 CCGTCCCAAAAATTTTGTCTTAGATTT 59.344 33.333 16.15 0.00 0.00 2.17
661 668 7.014808 TCCGTCCCAAAAATTTTGTCTTAGATT 59.985 33.333 16.15 0.00 0.00 2.40
662 669 6.492087 TCCGTCCCAAAAATTTTGTCTTAGAT 59.508 34.615 16.15 0.00 0.00 1.98
663 670 5.828859 TCCGTCCCAAAAATTTTGTCTTAGA 59.171 36.000 16.15 5.86 0.00 2.10
664 671 6.079424 TCCGTCCCAAAAATTTTGTCTTAG 57.921 37.500 16.15 1.92 0.00 2.18
665 672 5.010213 CCTCCGTCCCAAAAATTTTGTCTTA 59.990 40.000 16.15 0.00 0.00 2.10
666 673 4.202212 CCTCCGTCCCAAAAATTTTGTCTT 60.202 41.667 16.15 0.00 0.00 3.01
667 674 3.320826 CCTCCGTCCCAAAAATTTTGTCT 59.679 43.478 16.15 0.00 0.00 3.41
668 675 3.554129 CCCTCCGTCCCAAAAATTTTGTC 60.554 47.826 16.15 6.59 0.00 3.18
669 676 2.367241 CCCTCCGTCCCAAAAATTTTGT 59.633 45.455 16.15 0.00 0.00 2.83
670 677 2.630580 TCCCTCCGTCCCAAAAATTTTG 59.369 45.455 11.24 11.24 0.00 2.44
671 678 2.897326 CTCCCTCCGTCCCAAAAATTTT 59.103 45.455 0.00 0.00 0.00 1.82
672 679 2.158370 ACTCCCTCCGTCCCAAAAATTT 60.158 45.455 0.00 0.00 0.00 1.82
673 680 1.427753 ACTCCCTCCGTCCCAAAAATT 59.572 47.619 0.00 0.00 0.00 1.82
674 681 1.073098 ACTCCCTCCGTCCCAAAAAT 58.927 50.000 0.00 0.00 0.00 1.82
675 682 1.626825 CTACTCCCTCCGTCCCAAAAA 59.373 52.381 0.00 0.00 0.00 1.94
676 683 1.203212 TCTACTCCCTCCGTCCCAAAA 60.203 52.381 0.00 0.00 0.00 2.44
677 684 0.410663 TCTACTCCCTCCGTCCCAAA 59.589 55.000 0.00 0.00 0.00 3.28
678 685 0.410663 TTCTACTCCCTCCGTCCCAA 59.589 55.000 0.00 0.00 0.00 4.12
679 686 0.410663 TTTCTACTCCCTCCGTCCCA 59.589 55.000 0.00 0.00 0.00 4.37
680 687 0.822811 GTTTCTACTCCCTCCGTCCC 59.177 60.000 0.00 0.00 0.00 4.46
681 688 0.822811 GGTTTCTACTCCCTCCGTCC 59.177 60.000 0.00 0.00 0.00 4.79
682 689 1.204231 GTGGTTTCTACTCCCTCCGTC 59.796 57.143 0.00 0.00 0.00 4.79
683 690 1.203149 AGTGGTTTCTACTCCCTCCGT 60.203 52.381 0.00 0.00 0.00 4.69
684 691 1.204941 CAGTGGTTTCTACTCCCTCCG 59.795 57.143 0.00 0.00 0.00 4.63
685 692 1.066071 GCAGTGGTTTCTACTCCCTCC 60.066 57.143 0.00 0.00 0.00 4.30
686 693 1.066071 GGCAGTGGTTTCTACTCCCTC 60.066 57.143 0.00 0.00 0.00 4.30
687 694 0.984995 GGCAGTGGTTTCTACTCCCT 59.015 55.000 0.00 0.00 0.00 4.20
688 695 0.984995 AGGCAGTGGTTTCTACTCCC 59.015 55.000 0.00 0.00 0.00 4.30
689 696 1.946283 GCAGGCAGTGGTTTCTACTCC 60.946 57.143 0.00 0.00 0.00 3.85
690 697 1.270839 TGCAGGCAGTGGTTTCTACTC 60.271 52.381 0.00 0.00 0.00 2.59
691 698 0.764890 TGCAGGCAGTGGTTTCTACT 59.235 50.000 0.00 0.00 0.00 2.57
692 699 1.604604 TTGCAGGCAGTGGTTTCTAC 58.395 50.000 0.00 0.00 0.00 2.59
732 739 4.937620 TCTGACCAAATCTGCATACAGTTC 59.062 41.667 0.00 0.00 44.77 3.01
743 750 5.765182 ACAAAGAAACGATCTGACCAAATCT 59.235 36.000 0.00 0.00 38.79 2.40
757 764 2.693797 AGCTGCATCACAAAGAAACG 57.306 45.000 1.02 0.00 0.00 3.60
767 774 3.743521 ACAAGACACTAAAGCTGCATCA 58.256 40.909 1.02 0.00 0.00 3.07
813 821 3.701542 AGAATACGGAAGAGATGTGCTCA 59.298 43.478 0.00 0.00 46.45 4.26
814 822 4.202060 TGAGAATACGGAAGAGATGTGCTC 60.202 45.833 0.00 0.00 44.29 4.26
815 823 3.701542 TGAGAATACGGAAGAGATGTGCT 59.298 43.478 0.00 0.00 0.00 4.40
816 824 4.046938 TGAGAATACGGAAGAGATGTGC 57.953 45.455 0.00 0.00 0.00 4.57
820 828 6.481644 GCATTTTCTGAGAATACGGAAGAGAT 59.518 38.462 0.00 0.00 36.67 2.75
822 830 5.814705 AGCATTTTCTGAGAATACGGAAGAG 59.185 40.000 0.00 0.00 36.67 2.85
845 853 3.548745 TGGTGATTGACAGGATGCTAG 57.451 47.619 0.00 0.00 42.53 3.42
859 867 7.732025 TCTCAACGGTAATACATATTGGTGAT 58.268 34.615 0.00 0.00 0.00 3.06
860 868 7.114866 TCTCAACGGTAATACATATTGGTGA 57.885 36.000 0.00 0.00 0.00 4.02
861 869 7.441157 ACATCTCAACGGTAATACATATTGGTG 59.559 37.037 0.00 0.00 0.00 4.17
862 870 7.506114 ACATCTCAACGGTAATACATATTGGT 58.494 34.615 0.00 0.00 0.00 3.67
863 871 7.962964 ACATCTCAACGGTAATACATATTGG 57.037 36.000 0.00 0.00 0.00 3.16
957 970 5.189928 TCAAAACAAAGAGAAGGCTGTGTA 58.810 37.500 0.00 0.00 35.32 2.90
1087 1100 5.728351 TTGAAAAGTAAACGTCTGGACAG 57.272 39.130 0.00 0.00 0.00 3.51
1152 1166 9.197694 CAAATATATCTGGTTTACGAAGAGAGG 57.802 37.037 0.00 0.00 0.00 3.69
1177 1191 6.395780 TGGAACTTATTGGTTCTATTCCCA 57.604 37.500 7.19 0.00 43.43 4.37
1187 1201 8.599624 ATGAGAAATGAATGGAACTTATTGGT 57.400 30.769 0.00 0.00 0.00 3.67
1233 1247 8.023021 TCAACAGGTAAGCTCAATCTATACAT 57.977 34.615 0.00 0.00 0.00 2.29
1250 1264 5.047802 CAGCATTAGGTTTTGATCAACAGGT 60.048 40.000 7.89 0.00 0.00 4.00
1315 1329 6.126863 TGGACTGAACCTCTGACAAATAAT 57.873 37.500 0.00 0.00 0.00 1.28
1325 1339 1.203187 TGGTAGCTGGACTGAACCTCT 60.203 52.381 0.00 0.00 0.00 3.69
1429 1443 8.347004 TGGCTGACAGAAATATAATGTTTTGA 57.653 30.769 6.65 0.00 0.00 2.69
1441 1455 5.859205 AACTTTCTTTGGCTGACAGAAAT 57.141 34.783 6.65 0.00 36.26 2.17
1444 1458 3.815401 GCTAACTTTCTTTGGCTGACAGA 59.185 43.478 6.65 0.00 30.65 3.41
1600 1614 9.891828 TGATAGCATTTATTAATAAGCAAACCG 57.108 29.630 17.11 0.99 0.00 4.44
1655 1669 4.285863 TCTGGAAATTTGGTTCTGGTTGT 58.714 39.130 0.00 0.00 0.00 3.32
1661 1678 9.178758 GTAGATATGTTCTGGAAATTTGGTTCT 57.821 33.333 0.00 0.00 35.79 3.01
1870 1887 7.255625 GCAAGAAATACTGAAAGGAAAGAAGGT 60.256 37.037 0.00 0.00 39.30 3.50
2175 2192 8.195436 AGCAGAATTGAGGATTATGAAATTGTG 58.805 33.333 0.00 0.00 38.88 3.33
2215 2233 2.360844 TCCGACACAAAGCTTGTTCAA 58.639 42.857 0.00 0.00 43.23 2.69
2237 2255 5.067273 TCGTACAACTTGGATGTGGAAATT 58.933 37.500 0.00 0.00 32.27 1.82
2241 2259 3.755112 TTCGTACAACTTGGATGTGGA 57.245 42.857 0.00 0.00 32.27 4.02
2389 2407 1.448985 TAAGGCACCGAAGCATTGTC 58.551 50.000 8.78 0.00 39.09 3.18
2391 2409 1.133025 CCTTAAGGCACCGAAGCATTG 59.867 52.381 9.00 0.00 39.09 2.82
2392 2410 1.463674 CCTTAAGGCACCGAAGCATT 58.536 50.000 9.00 4.53 41.80 3.56
2393 2411 3.175133 CCTTAAGGCACCGAAGCAT 57.825 52.632 9.00 0.00 35.83 3.79
2394 2412 4.713946 CCTTAAGGCACCGAAGCA 57.286 55.556 9.00 0.00 35.83 3.91
2404 2422 1.133025 CAATGCTTCGGTGCCTTAAGG 59.867 52.381 17.81 17.81 38.53 2.69
2405 2423 1.812571 ACAATGCTTCGGTGCCTTAAG 59.187 47.619 0.00 0.00 0.00 1.85
2408 2426 1.244019 GGACAATGCTTCGGTGCCTT 61.244 55.000 0.00 0.00 0.00 4.35
2409 2427 1.675641 GGACAATGCTTCGGTGCCT 60.676 57.895 0.00 0.00 0.00 4.75
2410 2428 1.523154 TTGGACAATGCTTCGGTGCC 61.523 55.000 0.00 0.00 0.00 5.01
2411 2429 0.109597 CTTGGACAATGCTTCGGTGC 60.110 55.000 0.00 0.00 0.00 5.01
2412 2430 1.522668 TCTTGGACAATGCTTCGGTG 58.477 50.000 0.00 0.00 0.00 4.94
2413 2431 2.496899 ATCTTGGACAATGCTTCGGT 57.503 45.000 0.00 0.00 0.00 4.69
2414 2432 6.808008 ATAATATCTTGGACAATGCTTCGG 57.192 37.500 0.00 0.00 0.00 4.30
2415 2433 9.764870 CATAATAATATCTTGGACAATGCTTCG 57.235 33.333 0.00 0.00 0.00 3.79
2418 2436 7.670979 TGCCATAATAATATCTTGGACAATGCT 59.329 33.333 5.83 0.00 0.00 3.79
2420 2438 9.017509 AGTGCCATAATAATATCTTGGACAATG 57.982 33.333 5.83 0.00 0.00 2.82
2424 2442 7.175641 AGCAAGTGCCATAATAATATCTTGGAC 59.824 37.037 0.00 2.68 43.38 4.02
2425 2443 7.175467 CAGCAAGTGCCATAATAATATCTTGGA 59.825 37.037 0.00 0.00 43.38 3.53
2985 3414 4.023707 GTCTAAGCAGCACAACAACTGAAT 60.024 41.667 0.00 0.00 35.90 2.57
2986 3415 3.312421 GTCTAAGCAGCACAACAACTGAA 59.688 43.478 0.00 0.00 35.90 3.02
2987 3416 2.872245 GTCTAAGCAGCACAACAACTGA 59.128 45.455 0.00 0.00 35.90 3.41
2988 3417 2.031682 GGTCTAAGCAGCACAACAACTG 60.032 50.000 0.00 0.00 36.96 3.16
2989 3418 2.222027 GGTCTAAGCAGCACAACAACT 58.778 47.619 0.00 0.00 0.00 3.16
2990 3419 1.946768 TGGTCTAAGCAGCACAACAAC 59.053 47.619 0.00 0.00 0.00 3.32
2991 3420 2.340210 TGGTCTAAGCAGCACAACAA 57.660 45.000 0.00 0.00 0.00 2.83
2992 3421 2.224499 TGATGGTCTAAGCAGCACAACA 60.224 45.455 0.00 0.00 37.06 3.33
2993 3422 2.426522 TGATGGTCTAAGCAGCACAAC 58.573 47.619 0.00 0.00 37.06 3.32
2994 3423 2.857186 TGATGGTCTAAGCAGCACAA 57.143 45.000 0.00 0.00 37.06 3.33
2995 3424 2.857186 TTGATGGTCTAAGCAGCACA 57.143 45.000 0.00 0.00 41.98 4.57
2996 3425 4.708726 AATTTGATGGTCTAAGCAGCAC 57.291 40.909 0.00 0.00 41.98 4.40
2997 3426 4.082081 CCAAATTTGATGGTCTAAGCAGCA 60.082 41.667 19.86 0.00 40.46 4.41
2998 3427 4.158394 TCCAAATTTGATGGTCTAAGCAGC 59.842 41.667 19.86 0.00 39.09 5.25
2999 3428 5.183713 TGTCCAAATTTGATGGTCTAAGCAG 59.816 40.000 19.86 0.00 39.09 4.24
3000 3429 5.076182 TGTCCAAATTTGATGGTCTAAGCA 58.924 37.500 19.86 0.35 39.09 3.91
3001 3430 5.643379 TGTCCAAATTTGATGGTCTAAGC 57.357 39.130 19.86 0.00 39.09 3.09
3002 3431 6.532657 GCATTGTCCAAATTTGATGGTCTAAG 59.467 38.462 19.86 0.00 39.09 2.18
3003 3432 6.211184 AGCATTGTCCAAATTTGATGGTCTAA 59.789 34.615 19.86 5.35 39.09 2.10
3004 3433 5.716228 AGCATTGTCCAAATTTGATGGTCTA 59.284 36.000 19.86 0.00 39.09 2.59
3005 3434 4.529377 AGCATTGTCCAAATTTGATGGTCT 59.471 37.500 19.86 5.97 39.09 3.85
3006 3435 4.824289 AGCATTGTCCAAATTTGATGGTC 58.176 39.130 19.86 2.48 39.09 4.02
3007 3436 4.895668 AGCATTGTCCAAATTTGATGGT 57.104 36.364 19.86 16.13 39.09 3.55
3008 3437 4.327898 CGAAGCATTGTCCAAATTTGATGG 59.672 41.667 19.86 3.88 39.41 3.51
3009 3438 4.327898 CCGAAGCATTGTCCAAATTTGATG 59.672 41.667 19.86 14.93 0.00 3.07
3010 3439 4.021192 ACCGAAGCATTGTCCAAATTTGAT 60.021 37.500 19.86 2.01 0.00 2.57
3011 3440 3.320541 ACCGAAGCATTGTCCAAATTTGA 59.679 39.130 19.86 3.14 0.00 2.69
3012 3441 3.429543 CACCGAAGCATTGTCCAAATTTG 59.570 43.478 11.40 11.40 0.00 2.32
3013 3442 3.652274 CACCGAAGCATTGTCCAAATTT 58.348 40.909 0.00 0.00 0.00 1.82
3014 3443 2.610232 GCACCGAAGCATTGTCCAAATT 60.610 45.455 0.00 0.00 0.00 1.82
3015 3444 1.067635 GCACCGAAGCATTGTCCAAAT 60.068 47.619 0.00 0.00 0.00 2.32
3016 3445 0.313672 GCACCGAAGCATTGTCCAAA 59.686 50.000 0.00 0.00 0.00 3.28
3017 3446 1.523154 GGCACCGAAGCATTGTCCAA 61.523 55.000 1.64 0.00 35.83 3.53
3018 3447 1.971167 GGCACCGAAGCATTGTCCA 60.971 57.895 1.64 0.00 35.83 4.02
3019 3448 1.244019 AAGGCACCGAAGCATTGTCC 61.244 55.000 0.00 0.00 37.11 4.02
3020 3449 1.448985 TAAGGCACCGAAGCATTGTC 58.551 50.000 8.78 0.00 39.09 3.18
3021 3450 1.904287 TTAAGGCACCGAAGCATTGT 58.096 45.000 8.78 0.00 39.09 2.71
3022 3451 2.415893 CCTTTAAGGCACCGAAGCATTG 60.416 50.000 0.00 0.00 39.09 2.82
3023 3452 1.818674 CCTTTAAGGCACCGAAGCATT 59.181 47.619 0.00 4.53 41.80 3.56
3024 3453 1.463674 CCTTTAAGGCACCGAAGCAT 58.536 50.000 0.00 0.00 35.83 3.79
3025 3454 2.941210 CCTTTAAGGCACCGAAGCA 58.059 52.632 0.00 0.00 35.83 3.91
3043 3472 2.203480 TGACCCAAAGGCAGGTGC 60.203 61.111 0.00 0.00 36.17 5.01
3044 3473 1.151450 AGTGACCCAAAGGCAGGTG 59.849 57.895 0.00 0.00 36.17 4.00
3045 3474 1.151450 CAGTGACCCAAAGGCAGGT 59.849 57.895 0.00 0.00 39.75 4.00
3046 3475 0.890996 GTCAGTGACCCAAAGGCAGG 60.891 60.000 12.54 0.00 36.11 4.85
3047 3476 0.179020 TGTCAGTGACCCAAAGGCAG 60.179 55.000 20.43 0.00 36.11 4.85
3048 3477 0.478072 ATGTCAGTGACCCAAAGGCA 59.522 50.000 20.43 0.00 36.11 4.75
3049 3478 0.883833 CATGTCAGTGACCCAAAGGC 59.116 55.000 20.43 0.00 36.11 4.35
3050 3479 1.881973 CACATGTCAGTGACCCAAAGG 59.118 52.381 20.43 6.15 42.05 3.11
3051 3480 1.881973 CCACATGTCAGTGACCCAAAG 59.118 52.381 20.43 8.14 42.05 2.77
3052 3481 1.979855 CCACATGTCAGTGACCCAAA 58.020 50.000 20.43 1.95 42.05 3.28
3053 3482 0.537143 GCCACATGTCAGTGACCCAA 60.537 55.000 20.43 2.34 42.05 4.12
3054 3483 1.073025 GCCACATGTCAGTGACCCA 59.927 57.895 20.43 3.20 42.05 4.51
3055 3484 1.675641 GGCCACATGTCAGTGACCC 60.676 63.158 20.43 9.32 42.05 4.46
3056 3485 0.957395 CTGGCCACATGTCAGTGACC 60.957 60.000 20.43 3.80 41.79 4.02
3057 3486 1.580845 GCTGGCCACATGTCAGTGAC 61.581 60.000 16.68 16.68 42.05 3.67
3058 3487 1.302752 GCTGGCCACATGTCAGTGA 60.303 57.895 0.00 0.00 42.05 3.41
3059 3488 2.338015 GGCTGGCCACATGTCAGTG 61.338 63.158 0.00 0.00 39.21 3.66
3060 3489 2.034687 GGCTGGCCACATGTCAGT 59.965 61.111 0.00 0.00 35.81 3.41
3061 3490 2.034532 TGGCTGGCCACATGTCAG 59.965 61.111 10.55 8.34 41.89 3.51
3069 3498 4.601794 CCAACAGGTGGCTGGCCA 62.602 66.667 10.55 10.55 41.72 5.36
3077 3506 1.891919 CACGTGGGTCCAACAGGTG 60.892 63.158 7.95 2.20 44.74 4.00
3078 3507 2.319890 GACACGTGGGTCCAACAGGT 62.320 60.000 21.57 0.00 37.42 4.00
3079 3508 1.597027 GACACGTGGGTCCAACAGG 60.597 63.158 21.57 0.00 0.00 4.00
3080 3509 0.250295 ATGACACGTGGGTCCAACAG 60.250 55.000 21.57 0.00 36.97 3.16
3081 3510 1.001520 CTATGACACGTGGGTCCAACA 59.998 52.381 21.57 8.24 36.97 3.33
3082 3511 1.274167 TCTATGACACGTGGGTCCAAC 59.726 52.381 21.57 2.83 36.97 3.77
3083 3512 1.274167 GTCTATGACACGTGGGTCCAA 59.726 52.381 21.57 0.00 36.97 3.53
3084 3513 0.892755 GTCTATGACACGTGGGTCCA 59.107 55.000 21.57 12.10 36.97 4.02
3085 3514 0.892755 TGTCTATGACACGTGGGTCC 59.107 55.000 21.57 6.54 37.67 4.46
3094 3523 2.371841 ACCTGCCTTTGTGTCTATGACA 59.628 45.455 0.00 0.00 40.50 3.58
3095 3524 2.744202 CACCTGCCTTTGTGTCTATGAC 59.256 50.000 0.00 0.00 0.00 3.06
3096 3525 2.875672 GCACCTGCCTTTGTGTCTATGA 60.876 50.000 0.00 0.00 34.94 2.15
3097 3526 1.470098 GCACCTGCCTTTGTGTCTATG 59.530 52.381 0.00 0.00 34.94 2.23
3098 3527 1.826385 GCACCTGCCTTTGTGTCTAT 58.174 50.000 0.00 0.00 34.94 1.98
3099 3528 3.322514 GCACCTGCCTTTGTGTCTA 57.677 52.632 0.00 0.00 34.94 2.59
3100 3529 4.164258 GCACCTGCCTTTGTGTCT 57.836 55.556 0.00 0.00 34.94 3.41
3117 3546 1.133025 CAATGCTTCGGTGCCTTAAGG 59.867 52.381 17.81 17.81 38.53 2.69
3118 3547 1.812571 ACAATGCTTCGGTGCCTTAAG 59.187 47.619 0.00 0.00 0.00 1.85
3119 3548 1.810151 GACAATGCTTCGGTGCCTTAA 59.190 47.619 0.00 0.00 0.00 1.85
3120 3549 1.448985 GACAATGCTTCGGTGCCTTA 58.551 50.000 0.00 0.00 0.00 2.69
3121 3550 1.244019 GGACAATGCTTCGGTGCCTT 61.244 55.000 0.00 0.00 0.00 4.35
3122 3551 1.675641 GGACAATGCTTCGGTGCCT 60.676 57.895 0.00 0.00 0.00 4.75
3123 3552 1.523154 TTGGACAATGCTTCGGTGCC 61.523 55.000 0.00 0.00 0.00 5.01
3124 3553 0.109597 CTTGGACAATGCTTCGGTGC 60.110 55.000 0.00 0.00 0.00 5.01
3125 3554 1.522668 TCTTGGACAATGCTTCGGTG 58.477 50.000 0.00 0.00 0.00 4.94
3126 3555 2.496899 ATCTTGGACAATGCTTCGGT 57.503 45.000 0.00 0.00 0.00 4.69
3127 3556 6.808008 ATAATATCTTGGACAATGCTTCGG 57.192 37.500 0.00 0.00 0.00 4.30
3128 3557 9.764870 CATAATAATATCTTGGACAATGCTTCG 57.235 33.333 0.00 0.00 0.00 3.79
3130 3559 8.526147 GCCATAATAATATCTTGGACAATGCTT 58.474 33.333 5.83 0.00 0.00 3.91
3131 3560 7.670979 TGCCATAATAATATCTTGGACAATGCT 59.329 33.333 5.83 0.00 0.00 3.79
3132 3561 7.756722 GTGCCATAATAATATCTTGGACAATGC 59.243 37.037 5.83 0.00 0.00 3.56
3133 3562 9.017509 AGTGCCATAATAATATCTTGGACAATG 57.982 33.333 5.83 0.00 0.00 2.82
3134 3563 9.592196 AAGTGCCATAATAATATCTTGGACAAT 57.408 29.630 5.83 1.57 0.00 2.71
3135 3564 8.849168 CAAGTGCCATAATAATATCTTGGACAA 58.151 33.333 5.83 0.00 0.00 3.18
3136 3565 7.040478 GCAAGTGCCATAATAATATCTTGGACA 60.040 37.037 5.83 2.00 33.87 4.02
3137 3566 7.175641 AGCAAGTGCCATAATAATATCTTGGAC 59.824 37.037 0.00 2.68 43.38 4.02
3138 3567 7.175467 CAGCAAGTGCCATAATAATATCTTGGA 59.825 37.037 0.00 0.00 43.38 3.53
3139 3568 7.310664 CAGCAAGTGCCATAATAATATCTTGG 58.689 38.462 0.00 0.00 43.38 3.61
3140 3569 7.175467 TCCAGCAAGTGCCATAATAATATCTTG 59.825 37.037 0.00 0.00 43.38 3.02
3141 3570 7.175641 GTCCAGCAAGTGCCATAATAATATCTT 59.824 37.037 0.00 0.00 43.38 2.40
3142 3571 6.656693 GTCCAGCAAGTGCCATAATAATATCT 59.343 38.462 0.00 0.00 43.38 1.98
3143 3572 6.430925 TGTCCAGCAAGTGCCATAATAATATC 59.569 38.462 0.00 0.00 43.38 1.63
3144 3573 6.306199 TGTCCAGCAAGTGCCATAATAATAT 58.694 36.000 0.00 0.00 43.38 1.28
3145 3574 5.689835 TGTCCAGCAAGTGCCATAATAATA 58.310 37.500 0.00 0.00 43.38 0.98
3146 3575 4.535781 TGTCCAGCAAGTGCCATAATAAT 58.464 39.130 0.00 0.00 43.38 1.28
3147 3576 3.961849 TGTCCAGCAAGTGCCATAATAA 58.038 40.909 0.00 0.00 43.38 1.40
3148 3577 3.643199 TGTCCAGCAAGTGCCATAATA 57.357 42.857 0.00 0.00 43.38 0.98
3149 3578 2.512692 TGTCCAGCAAGTGCCATAAT 57.487 45.000 0.00 0.00 43.38 1.28
3150 3579 2.284754 TTGTCCAGCAAGTGCCATAA 57.715 45.000 0.00 0.00 43.38 1.90
3151 3580 1.885887 GTTTGTCCAGCAAGTGCCATA 59.114 47.619 0.00 0.00 43.38 2.74
3152 3581 0.675633 GTTTGTCCAGCAAGTGCCAT 59.324 50.000 0.00 0.00 43.38 4.40
3153 3582 1.391157 GGTTTGTCCAGCAAGTGCCA 61.391 55.000 0.00 0.00 43.38 4.92
3154 3583 1.363807 GGTTTGTCCAGCAAGTGCC 59.636 57.895 0.00 0.00 43.38 5.01
3155 3584 1.363807 GGGTTTGTCCAGCAAGTGC 59.636 57.895 0.00 0.00 38.47 4.40
3156 3585 1.110442 TTGGGTTTGTCCAGCAAGTG 58.890 50.000 0.00 0.00 38.47 3.16
3157 3586 1.859302 TTTGGGTTTGTCCAGCAAGT 58.141 45.000 0.00 0.00 38.47 3.16
3158 3587 3.473923 AATTTGGGTTTGTCCAGCAAG 57.526 42.857 0.00 0.00 38.47 4.01
3159 3588 3.198635 TCAAATTTGGGTTTGTCCAGCAA 59.801 39.130 17.90 0.00 39.50 3.91
3160 3589 2.768527 TCAAATTTGGGTTTGTCCAGCA 59.231 40.909 17.90 0.00 39.50 4.41
3161 3590 3.467374 TCAAATTTGGGTTTGTCCAGC 57.533 42.857 17.90 0.00 39.50 4.85
3162 3591 6.303021 CAAATCAAATTTGGGTTTGTCCAG 57.697 37.500 25.49 11.94 44.44 3.86
3175 3604 9.934190 GCTCAATACAAAACAACAAATCAAATT 57.066 25.926 0.00 0.00 0.00 1.82
3176 3605 9.107177 TGCTCAATACAAAACAACAAATCAAAT 57.893 25.926 0.00 0.00 0.00 2.32
3177 3606 8.484641 TGCTCAATACAAAACAACAAATCAAA 57.515 26.923 0.00 0.00 0.00 2.69
3178 3607 7.978414 TCTGCTCAATACAAAACAACAAATCAA 59.022 29.630 0.00 0.00 0.00 2.57
3179 3608 7.434897 GTCTGCTCAATACAAAACAACAAATCA 59.565 33.333 0.00 0.00 0.00 2.57
3180 3609 7.434897 TGTCTGCTCAATACAAAACAACAAATC 59.565 33.333 0.00 0.00 0.00 2.17
3181 3610 7.264221 TGTCTGCTCAATACAAAACAACAAAT 58.736 30.769 0.00 0.00 0.00 2.32
3182 3611 6.625362 TGTCTGCTCAATACAAAACAACAAA 58.375 32.000 0.00 0.00 0.00 2.83
3183 3612 6.201226 TGTCTGCTCAATACAAAACAACAA 57.799 33.333 0.00 0.00 0.00 2.83
3184 3613 5.826601 TGTCTGCTCAATACAAAACAACA 57.173 34.783 0.00 0.00 0.00 3.33
3185 3614 6.033341 TGTTGTCTGCTCAATACAAAACAAC 58.967 36.000 7.82 7.82 43.28 3.32
3186 3615 6.201226 TGTTGTCTGCTCAATACAAAACAA 57.799 33.333 0.00 0.00 35.08 2.83
3187 3616 5.826601 TGTTGTCTGCTCAATACAAAACA 57.173 34.783 0.00 0.00 35.08 2.83
3188 3617 5.565259 CGATGTTGTCTGCTCAATACAAAAC 59.435 40.000 0.00 0.00 35.08 2.43
3189 3618 5.238432 ACGATGTTGTCTGCTCAATACAAAA 59.762 36.000 0.00 0.00 35.08 2.44
3190 3619 4.754618 ACGATGTTGTCTGCTCAATACAAA 59.245 37.500 0.00 0.00 35.08 2.83
3191 3620 4.314961 ACGATGTTGTCTGCTCAATACAA 58.685 39.130 0.00 0.00 0.00 2.41
3192 3621 3.925379 ACGATGTTGTCTGCTCAATACA 58.075 40.909 0.00 0.00 0.00 2.29
3193 3622 4.928661 AACGATGTTGTCTGCTCAATAC 57.071 40.909 0.00 0.00 0.00 1.89
3194 3623 5.237815 AGAAACGATGTTGTCTGCTCAATA 58.762 37.500 0.00 0.00 0.00 1.90
3195 3624 4.067896 AGAAACGATGTTGTCTGCTCAAT 58.932 39.130 0.00 0.00 0.00 2.57
3196 3625 3.466836 AGAAACGATGTTGTCTGCTCAA 58.533 40.909 0.00 0.00 0.00 3.02
3197 3626 3.111853 AGAAACGATGTTGTCTGCTCA 57.888 42.857 0.00 0.00 0.00 4.26
3198 3627 3.987868 TGTAGAAACGATGTTGTCTGCTC 59.012 43.478 0.00 0.00 0.00 4.26
3199 3628 3.990092 TGTAGAAACGATGTTGTCTGCT 58.010 40.909 0.00 0.00 0.00 4.24
3200 3629 4.928661 ATGTAGAAACGATGTTGTCTGC 57.071 40.909 0.00 0.00 0.00 4.26
3201 3630 6.256539 AGCATATGTAGAAACGATGTTGTCTG 59.743 38.462 4.29 0.00 0.00 3.51
3202 3631 6.341316 AGCATATGTAGAAACGATGTTGTCT 58.659 36.000 4.29 0.00 0.00 3.41
3203 3632 6.589830 AGCATATGTAGAAACGATGTTGTC 57.410 37.500 4.29 0.00 0.00 3.18
3204 3633 8.662781 AATAGCATATGTAGAAACGATGTTGT 57.337 30.769 4.29 0.00 0.00 3.32
3288 3717 8.922058 AAAGAGCATGCTCAACTAAAATATTG 57.078 30.769 40.91 0.00 44.99 1.90
3325 3755 6.293462 CCCGGCTATAATTTGTAGAAAAGAGC 60.293 42.308 0.00 0.00 0.00 4.09
3370 3800 5.181748 GTTCCATCTTATCTCTGCAGTGTT 58.818 41.667 14.67 9.07 0.00 3.32
3546 3976 5.381174 TCAAATCTATGCATATTGCTGCC 57.619 39.130 6.92 0.00 45.31 4.85
3587 4019 6.183360 TGTGCAAATACACACACAGTAAACAT 60.183 34.615 0.00 0.00 45.36 2.71
3667 4099 5.468072 ACAGCATAGCATAACATAGTTCTGC 59.532 40.000 10.97 10.97 0.00 4.26
3833 4265 6.942532 ATGAAGTCGGCAATACATACAATT 57.057 33.333 0.00 0.00 0.00 2.32
3848 4280 1.651987 ACCATACCGCAATGAAGTCG 58.348 50.000 0.00 0.00 0.00 4.18
3897 4329 5.712152 AGAACCAACAGCAGAAAAATAGG 57.288 39.130 0.00 0.00 0.00 2.57
3898 4330 7.440523 ACTAGAACCAACAGCAGAAAAATAG 57.559 36.000 0.00 0.00 0.00 1.73
3921 4353 5.392703 GCAGTTAGCAACCCCACTTTTATAC 60.393 44.000 0.00 0.00 44.79 1.47
4010 4442 7.446013 TCTGGTACAAAATAAGTGAAAACCGAT 59.554 33.333 0.00 0.00 38.70 4.18
4024 4464 6.295292 GGAAGCAAAGGAATCTGGTACAAAAT 60.295 38.462 0.00 0.00 38.70 1.82
4025 4465 5.010617 GGAAGCAAAGGAATCTGGTACAAAA 59.989 40.000 0.00 0.00 38.70 2.44
4122 4562 4.549458 CAATAACCTTCTGTTGCAGTTGG 58.451 43.478 0.00 3.14 37.83 3.77
4126 4566 3.503363 TCAGCAATAACCTTCTGTTGCAG 59.497 43.478 10.97 3.75 46.92 4.41
4235 4676 5.650266 TCAAGCCTTTTCAGACAACTTGTAA 59.350 36.000 0.00 0.00 35.64 2.41
4244 4685 3.831112 GCAAGATCAAGCCTTTTCAGAC 58.169 45.455 0.00 0.00 0.00 3.51
4672 5116 1.923864 CGAAAACCTGCACAAAACACC 59.076 47.619 0.00 0.00 0.00 4.16
4685 5129 5.041951 TGCAGACAACAATATCGAAAACC 57.958 39.130 0.00 0.00 0.00 3.27
4932 5376 3.146104 AGCACTGGTTTAGACTGCAAT 57.854 42.857 0.00 0.00 32.41 3.56
4993 5437 4.471726 GTGCAGGCATGTCAGCGC 62.472 66.667 12.58 12.58 34.64 5.92
5234 5678 1.267121 ACGGGATACAACAGAGCAGT 58.733 50.000 0.00 0.00 39.74 4.40
5263 5707 3.248363 TCTGATGTCTGCAGTCAAAAACG 59.752 43.478 17.46 5.49 34.98 3.60
5308 5752 3.050275 GCCCGTGAAGTCAGCCAC 61.050 66.667 0.00 0.00 0.00 5.01
5335 5779 6.489675 CATAAACCAATCACACATAGCAGAC 58.510 40.000 0.00 0.00 0.00 3.51
5384 5828 2.028203 AGAAGAGCTCAGCTTGTTCTCC 60.028 50.000 17.77 0.00 39.88 3.71
5431 5880 7.447374 AAATTATGTCCAGACAAAATGACGA 57.553 32.000 4.31 0.00 45.41 4.20
5444 5893 6.013725 ACCGATGGCTAGATAAATTATGTCCA 60.014 38.462 0.00 0.00 0.00 4.02
5483 5932 7.540055 GTGCAATTCAATTTGGTTTTTGTTCAA 59.460 29.630 0.00 0.00 0.00 2.69
5490 5939 6.756299 AACAGTGCAATTCAATTTGGTTTT 57.244 29.167 0.00 0.00 0.00 2.43
5523 5972 7.927048 AGTTCATACAACACCTTAGTTTCAAC 58.073 34.615 0.00 0.00 0.00 3.18
5532 5981 5.197451 TGGACAAAGTTCATACAACACCTT 58.803 37.500 0.00 0.00 0.00 3.50
5533 5982 4.787551 TGGACAAAGTTCATACAACACCT 58.212 39.130 0.00 0.00 0.00 4.00
5534 5983 5.508200 TTGGACAAAGTTCATACAACACC 57.492 39.130 0.00 0.00 0.00 4.16
5542 5991 4.792068 TCTCAGGTTTGGACAAAGTTCAT 58.208 39.130 0.00 0.00 0.00 2.57
5589 6038 4.730035 GCTGCTGCTATTGAACATGAGAAC 60.730 45.833 8.53 0.00 36.03 3.01
5637 6086 4.850680 TCCAGTTTAGTTTTGACCACACT 58.149 39.130 0.00 0.00 0.00 3.55
5679 6136 7.840342 ATGAAGTGAACTATACTGAAGCTTG 57.160 36.000 2.10 0.00 0.00 4.01
5732 6336 4.536765 ACACCCAAATCAAGTTCTCACTT 58.463 39.130 0.00 0.00 44.72 3.16
5754 6358 4.102524 TCAGGAGGCAAGTTTTCAGACTTA 59.897 41.667 0.00 0.00 37.76 2.24
5774 6378 4.183865 TCGTTGTAGATTCAATGGCTCAG 58.816 43.478 0.00 0.00 35.70 3.35
5799 6404 2.504175 TGTTTACCTCTACCTGGATGCC 59.496 50.000 0.00 0.00 0.00 4.40
5829 6498 1.239347 GCAACAGACCAGAAACCCTC 58.761 55.000 0.00 0.00 0.00 4.30
5836 6505 0.036732 GTGATGGGCAACAGACCAGA 59.963 55.000 0.00 0.00 45.58 3.86
5837 6506 0.250858 TGTGATGGGCAACAGACCAG 60.251 55.000 0.00 0.00 45.58 4.00
5838 6507 0.184692 TTGTGATGGGCAACAGACCA 59.815 50.000 0.00 0.00 46.67 4.02
5839 6508 1.474077 GATTGTGATGGGCAACAGACC 59.526 52.381 0.00 0.00 39.74 3.85
5841 6510 2.161855 GTGATTGTGATGGGCAACAGA 58.838 47.619 0.00 0.00 39.74 3.41
5856 6541 2.158842 GCTGTGGCTCCATCTAGTGATT 60.159 50.000 0.00 0.00 35.22 2.57
5894 6583 8.065627 TCTGTTATTATCCTTCTTCTACCTGGA 58.934 37.037 0.00 0.00 0.00 3.86
5910 6599 6.322201 CAGGCAATGGGTCTTTCTGTTATTAT 59.678 38.462 0.00 0.00 0.00 1.28
5911 6600 5.652014 CAGGCAATGGGTCTTTCTGTTATTA 59.348 40.000 0.00 0.00 0.00 0.98
5912 6601 4.463891 CAGGCAATGGGTCTTTCTGTTATT 59.536 41.667 0.00 0.00 0.00 1.40
5925 6614 2.148446 TGAAAGGATCAGGCAATGGG 57.852 50.000 0.00 0.00 33.04 4.00
5981 6670 2.319747 TCAACTAGGGAATGGGGGAGTA 59.680 50.000 0.00 0.00 0.00 2.59
6034 6728 3.826282 CCTGAGGGGAGCCAGAAA 58.174 61.111 0.00 0.00 37.23 2.52
6055 6749 0.883833 GTCAATGCAAGGAGGTGGTG 59.116 55.000 0.00 0.00 0.00 4.17
6056 6750 0.773644 AGTCAATGCAAGGAGGTGGT 59.226 50.000 0.00 0.00 0.00 4.16
6059 6753 1.406069 CGCTAGTCAATGCAAGGAGGT 60.406 52.381 0.00 0.00 0.00 3.85
6060 6754 1.293924 CGCTAGTCAATGCAAGGAGG 58.706 55.000 0.00 0.00 0.00 4.30
6087 6784 3.541713 CTAGCGTCCCAGCCCCTC 61.542 72.222 0.00 0.00 38.01 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.