Multiple sequence alignment - TraesCS4B01G300900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G300900 chr4B 100.000 3063 0 0 1 3063 587099001 587102063 0.000000e+00 5657
1 TraesCS4B01G300900 chr4B 95.760 2429 100 2 150 2576 321542820 321545247 0.000000e+00 3912
2 TraesCS4B01G300900 chr4B 96.341 492 15 3 2574 3063 587108974 587109464 0.000000e+00 806
3 TraesCS4B01G300900 chr4B 93.243 148 8 2 1 147 321542637 321542783 1.850000e-52 217
4 TraesCS4B01G300900 chr3B 96.951 2427 70 2 150 2575 473236474 473238897 0.000000e+00 4069
5 TraesCS4B01G300900 chr3B 96.122 490 17 2 2576 3063 534075683 534075194 0.000000e+00 798
6 TraesCS4B01G300900 chr3B 96.107 488 17 2 2578 3063 677341969 677341482 0.000000e+00 795
7 TraesCS4B01G300900 chr3B 95.270 148 6 1 1 147 473236290 473236437 1.840000e-57 233
8 TraesCS4B01G300900 chr6B 95.597 2430 99 7 150 2575 48080271 48082696 0.000000e+00 3888
9 TraesCS4B01G300900 chr6B 95.270 148 6 1 1 147 48080087 48080234 1.840000e-57 233
10 TraesCS4B01G300900 chr7B 95.195 2435 106 7 150 2577 51884586 51887016 0.000000e+00 3838
11 TraesCS4B01G300900 chr7B 96.122 490 17 2 2576 3063 110896235 110895746 0.000000e+00 798
12 TraesCS4B01G300900 chr7B 80.296 609 90 18 151 730 73168557 73169164 1.690000e-117 433
13 TraesCS4B01G300900 chr7B 93.243 148 9 1 1 147 51884402 51884549 1.850000e-52 217
14 TraesCS4B01G300900 chr7A 92.763 2432 115 16 150 2575 126149333 126151709 0.000000e+00 3459
15 TraesCS4B01G300900 chr6A 93.545 1890 86 12 690 2575 137393776 137391919 0.000000e+00 2782
16 TraesCS4B01G300900 chr6A 93.730 1595 74 8 150 1741 182419578 182418007 0.000000e+00 2368
17 TraesCS4B01G300900 chr6A 91.803 976 69 11 1610 2579 182418174 182417204 0.000000e+00 1349
18 TraesCS4B01G300900 chr6A 92.532 549 22 4 150 697 137492670 137492140 0.000000e+00 769
19 TraesCS4B01G300900 chr6A 92.568 148 7 2 1 147 182419759 182419615 3.090000e-50 209
20 TraesCS4B01G300900 chr2A 94.107 1595 71 6 150 1741 778649555 778651129 0.000000e+00 2403
21 TraesCS4B01G300900 chr2A 91.513 978 72 11 1604 2575 778650956 778651928 0.000000e+00 1336
22 TraesCS4B01G300900 chr2A 93.919 148 8 1 1 147 778649371 778649518 3.980000e-54 222
23 TraesCS4B01G300900 chr6D 93.845 1381 58 11 1207 2575 16251411 16252776 0.000000e+00 2054
24 TraesCS4B01G300900 chr5A 80.537 1675 236 50 150 1781 514148847 514147220 0.000000e+00 1205
25 TraesCS4B01G300900 chr5B 96.327 490 16 2 2576 3063 514799559 514799070 0.000000e+00 804
26 TraesCS4B01G300900 chr5B 96.138 492 17 2 2574 3063 705360494 705360003 0.000000e+00 802
27 TraesCS4B01G300900 chr5B 96.122 490 17 2 2576 3063 332165554 332165065 0.000000e+00 798
28 TraesCS4B01G300900 chr5B 95.935 492 18 2 2574 3063 560196768 560197259 0.000000e+00 797
29 TraesCS4B01G300900 chr1B 95.766 496 18 3 2571 3063 679828171 679827676 0.000000e+00 797


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G300900 chr4B 587099001 587102063 3062 False 5657.000000 5657 100.000000 1 3063 1 chr4B.!!$F1 3062
1 TraesCS4B01G300900 chr4B 321542637 321545247 2610 False 2064.500000 3912 94.501500 1 2576 2 chr4B.!!$F3 2575
2 TraesCS4B01G300900 chr3B 473236290 473238897 2607 False 2151.000000 4069 96.110500 1 2575 2 chr3B.!!$F1 2574
3 TraesCS4B01G300900 chr6B 48080087 48082696 2609 False 2060.500000 3888 95.433500 1 2575 2 chr6B.!!$F1 2574
4 TraesCS4B01G300900 chr7B 51884402 51887016 2614 False 2027.500000 3838 94.219000 1 2577 2 chr7B.!!$F2 2576
5 TraesCS4B01G300900 chr7B 73168557 73169164 607 False 433.000000 433 80.296000 151 730 1 chr7B.!!$F1 579
6 TraesCS4B01G300900 chr7A 126149333 126151709 2376 False 3459.000000 3459 92.763000 150 2575 1 chr7A.!!$F1 2425
7 TraesCS4B01G300900 chr6A 137391919 137393776 1857 True 2782.000000 2782 93.545000 690 2575 1 chr6A.!!$R1 1885
8 TraesCS4B01G300900 chr6A 182417204 182419759 2555 True 1308.666667 2368 92.700333 1 2579 3 chr6A.!!$R3 2578
9 TraesCS4B01G300900 chr6A 137492140 137492670 530 True 769.000000 769 92.532000 150 697 1 chr6A.!!$R2 547
10 TraesCS4B01G300900 chr2A 778649371 778651928 2557 False 1320.333333 2403 93.179667 1 2575 3 chr2A.!!$F1 2574
11 TraesCS4B01G300900 chr6D 16251411 16252776 1365 False 2054.000000 2054 93.845000 1207 2575 1 chr6D.!!$F1 1368
12 TraesCS4B01G300900 chr5A 514147220 514148847 1627 True 1205.000000 1205 80.537000 150 1781 1 chr5A.!!$R1 1631

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
640 721 2.896685 GTTTCACATGGGATGGAAACCA 59.103 45.455 0.0 0.0 40.52 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2584 2800 0.034896 GAGAGAACCGGACCAAAGCA 59.965 55.0 9.46 0.0 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 106 8.250332 GCCAATAATACAAGAAACATTGGAAGA 58.750 33.333 13.81 0.00 43.24 2.87
113 114 4.990526 AGAAACATTGGAAGACATGGAGT 58.009 39.130 0.00 0.00 0.00 3.85
124 125 5.104735 GGAAGACATGGAGTGAGAATTAGGT 60.105 44.000 0.00 0.00 0.00 3.08
141 142 9.927081 AGAATTAGGTCAACCAGAATTCATTAT 57.073 29.630 25.67 13.00 44.52 1.28
279 348 7.064609 AGCTTCAATTTCATCTCATTTGCATTG 59.935 33.333 0.00 0.00 0.00 2.82
640 721 2.896685 GTTTCACATGGGATGGAAACCA 59.103 45.455 0.00 0.00 40.52 3.67
666 750 5.446860 AGATGATTCAATGTGAGAAGGCAT 58.553 37.500 0.00 0.00 31.12 4.40
717 801 4.339247 ACTTCACCCATCAAAACTGAACTG 59.661 41.667 0.00 0.00 0.00 3.16
791 875 5.396362 GCTATGCACATTGCTATTGTTAACG 59.604 40.000 9.37 0.00 45.31 3.18
823 907 6.095580 TGTTGTACCTTTGCTTGATGTTGTAA 59.904 34.615 0.00 0.00 0.00 2.41
885 980 6.017440 TGCCTTTTTATATACCTGTCGCATTC 60.017 38.462 0.00 0.00 0.00 2.67
1001 1096 3.319972 CAGTTGGCTGCTATTTATGGCAT 59.680 43.478 4.88 4.88 43.42 4.40
1112 1207 4.081972 CGAGGAAGAGGACTTGATCTCAAA 60.082 45.833 0.00 0.00 36.39 2.69
1145 1240 2.419324 GACGGTCTGTCGATACTCACTT 59.581 50.000 0.00 0.00 37.96 3.16
1174 1269 2.979240 GAACTAGTTCCAAGAGGCAGG 58.021 52.381 22.74 0.00 33.64 4.85
1179 1274 0.112412 GTTCCAAGAGGCAGGGGAAA 59.888 55.000 0.00 0.00 40.81 3.13
1204 1299 1.415672 AAGGCCAAAGAGGGTGACGA 61.416 55.000 5.01 0.00 38.09 4.20
1329 1425 2.024319 ACGAGAAGCAGCGCAAGAC 61.024 57.895 11.47 0.00 43.02 3.01
1330 1426 1.735920 CGAGAAGCAGCGCAAGACT 60.736 57.895 11.47 1.52 43.02 3.24
1336 1432 0.179089 AGCAGCGCAAGACTATCCTG 60.179 55.000 11.47 0.00 43.02 3.86
1502 1601 6.069381 AGGGAGTATGTCCTAAAAATGCTCTT 60.069 38.462 0.00 0.00 46.06 2.85
1519 1618 4.943705 TGCTCTTTGGTATCCTTTTGCTAG 59.056 41.667 0.00 0.00 0.00 3.42
1546 1645 6.981722 TCCAAAATCTCTTTTGCTAAACTCC 58.018 36.000 5.50 0.00 46.47 3.85
1585 1697 4.455070 TCTACCTCTGATTGGCTAGCTA 57.545 45.455 15.72 5.44 0.00 3.32
1698 1848 5.077564 TGTCTAGTTGACTTCCTGCTTCTA 58.922 41.667 6.29 0.00 45.54 2.10
2011 2213 9.046296 TGTCTCTTGTCTGTTTCTTTATTTCTC 57.954 33.333 0.00 0.00 0.00 2.87
2132 2337 7.664758 AGCTACTTTGCAAGATTCTGAAATTT 58.335 30.769 0.00 0.00 34.99 1.82
2133 2338 8.146412 AGCTACTTTGCAAGATTCTGAAATTTT 58.854 29.630 0.00 0.00 34.99 1.82
2327 2541 6.211515 ACTTGTTTGATGAGTTTGAATCTGC 58.788 36.000 0.00 0.00 0.00 4.26
2384 2598 7.894376 ACCTTGTCAAATTGCATGAATTTAG 57.106 32.000 0.00 1.45 41.50 1.85
2405 2619 4.510038 GAACTGGTTCTGCATGTGAAAT 57.490 40.909 6.26 0.00 36.69 2.17
2546 2762 3.884091 ACCTGTTACCATTAACGTTTGCA 59.116 39.130 5.91 0.00 40.61 4.08
2579 2795 4.003648 GAGAACCAAACACCTCCTATGTG 58.996 47.826 0.00 0.00 39.63 3.21
2587 2803 4.844349 ACACCTCCTATGTGTTAATGCT 57.156 40.909 0.00 0.00 44.19 3.79
2588 2804 5.179452 ACACCTCCTATGTGTTAATGCTT 57.821 39.130 0.00 0.00 44.19 3.91
2589 2805 5.570320 ACACCTCCTATGTGTTAATGCTTT 58.430 37.500 0.00 0.00 44.19 3.51
2590 2806 5.415701 ACACCTCCTATGTGTTAATGCTTTG 59.584 40.000 0.00 0.00 44.19 2.77
2591 2807 4.949856 ACCTCCTATGTGTTAATGCTTTGG 59.050 41.667 0.00 0.00 0.00 3.28
2592 2808 4.949856 CCTCCTATGTGTTAATGCTTTGGT 59.050 41.667 0.00 0.00 0.00 3.67
2593 2809 5.066505 CCTCCTATGTGTTAATGCTTTGGTC 59.933 44.000 0.00 0.00 0.00 4.02
2594 2810 4.947388 TCCTATGTGTTAATGCTTTGGTCC 59.053 41.667 0.00 0.00 0.00 4.46
2595 2811 3.848272 ATGTGTTAATGCTTTGGTCCG 57.152 42.857 0.00 0.00 0.00 4.79
2596 2812 1.883275 TGTGTTAATGCTTTGGTCCGG 59.117 47.619 0.00 0.00 0.00 5.14
2597 2813 1.883926 GTGTTAATGCTTTGGTCCGGT 59.116 47.619 0.00 0.00 0.00 5.28
2598 2814 2.295070 GTGTTAATGCTTTGGTCCGGTT 59.705 45.455 0.00 0.00 0.00 4.44
2599 2815 2.554893 TGTTAATGCTTTGGTCCGGTTC 59.445 45.455 0.00 0.00 0.00 3.62
2600 2816 2.817844 GTTAATGCTTTGGTCCGGTTCT 59.182 45.455 0.00 0.00 0.00 3.01
2601 2817 1.534729 AATGCTTTGGTCCGGTTCTC 58.465 50.000 0.00 0.00 0.00 2.87
2602 2818 0.693049 ATGCTTTGGTCCGGTTCTCT 59.307 50.000 0.00 0.00 0.00 3.10
2603 2819 0.034896 TGCTTTGGTCCGGTTCTCTC 59.965 55.000 0.00 0.00 0.00 3.20
2604 2820 0.321996 GCTTTGGTCCGGTTCTCTCT 59.678 55.000 0.00 0.00 0.00 3.10
2605 2821 1.270893 GCTTTGGTCCGGTTCTCTCTT 60.271 52.381 0.00 0.00 0.00 2.85
2606 2822 2.028385 GCTTTGGTCCGGTTCTCTCTTA 60.028 50.000 0.00 0.00 0.00 2.10
2607 2823 3.556423 GCTTTGGTCCGGTTCTCTCTTAA 60.556 47.826 0.00 0.00 0.00 1.85
2608 2824 4.638304 CTTTGGTCCGGTTCTCTCTTAAA 58.362 43.478 0.00 0.00 0.00 1.52
2609 2825 4.693042 TTGGTCCGGTTCTCTCTTAAAA 57.307 40.909 0.00 0.00 0.00 1.52
2610 2826 4.267349 TGGTCCGGTTCTCTCTTAAAAG 57.733 45.455 0.00 0.00 0.00 2.27
2611 2827 3.007614 TGGTCCGGTTCTCTCTTAAAAGG 59.992 47.826 0.00 0.00 0.00 3.11
2612 2828 3.260128 GGTCCGGTTCTCTCTTAAAAGGA 59.740 47.826 0.00 0.00 0.00 3.36
2613 2829 4.496360 GTCCGGTTCTCTCTTAAAAGGAG 58.504 47.826 0.00 0.00 0.00 3.69
2614 2830 3.514309 TCCGGTTCTCTCTTAAAAGGAGG 59.486 47.826 0.00 0.00 0.00 4.30
2615 2831 3.263261 CGGTTCTCTCTTAAAAGGAGGC 58.737 50.000 7.78 0.00 0.00 4.70
2616 2832 3.611970 GGTTCTCTCTTAAAAGGAGGCC 58.388 50.000 0.00 0.00 0.00 5.19
2617 2833 3.264706 GGTTCTCTCTTAAAAGGAGGCCT 59.735 47.826 3.86 3.86 33.87 5.19
2619 2835 5.045797 GGTTCTCTCTTAAAAGGAGGCCTTA 60.046 44.000 6.77 0.00 43.92 2.69
2620 2836 6.473758 GTTCTCTCTTAAAAGGAGGCCTTAA 58.526 40.000 6.77 0.00 43.92 1.85
2621 2837 6.893020 TCTCTCTTAAAAGGAGGCCTTAAT 57.107 37.500 6.77 0.00 43.92 1.40
2622 2838 7.989947 TCTCTCTTAAAAGGAGGCCTTAATA 57.010 36.000 6.77 0.00 43.92 0.98
2623 2839 8.568617 TCTCTCTTAAAAGGAGGCCTTAATAT 57.431 34.615 6.77 0.00 43.92 1.28
2624 2840 8.652290 TCTCTCTTAAAAGGAGGCCTTAATATC 58.348 37.037 6.77 0.00 43.92 1.63
2625 2841 7.746703 TCTCTTAAAAGGAGGCCTTAATATCC 58.253 38.462 6.77 1.57 43.92 2.59
2626 2842 6.849151 TCTTAAAAGGAGGCCTTAATATCCC 58.151 40.000 6.77 0.28 43.92 3.85
2627 2843 6.624021 TCTTAAAAGGAGGCCTTAATATCCCT 59.376 38.462 6.77 3.34 43.92 4.20
2628 2844 5.751142 AAAAGGAGGCCTTAATATCCCTT 57.249 39.130 6.77 10.57 43.92 3.95
2629 2845 6.858792 AAAAGGAGGCCTTAATATCCCTTA 57.141 37.500 17.50 0.00 43.92 2.69
2630 2846 6.455690 AAAGGAGGCCTTAATATCCCTTAG 57.544 41.667 17.50 0.00 43.92 2.18
2631 2847 5.107979 AGGAGGCCTTAATATCCCTTAGT 57.892 43.478 6.77 0.00 31.86 2.24
2632 2848 5.487273 AGGAGGCCTTAATATCCCTTAGTT 58.513 41.667 6.77 0.00 31.86 2.24
2633 2849 5.917682 AGGAGGCCTTAATATCCCTTAGTTT 59.082 40.000 6.77 0.00 31.86 2.66
2634 2850 6.044520 AGGAGGCCTTAATATCCCTTAGTTTC 59.955 42.308 6.77 0.00 31.86 2.78
2635 2851 6.202202 AGGCCTTAATATCCCTTAGTTTCC 57.798 41.667 0.00 0.00 0.00 3.13
2636 2852 5.674958 AGGCCTTAATATCCCTTAGTTTCCA 59.325 40.000 0.00 0.00 0.00 3.53
2637 2853 5.768662 GGCCTTAATATCCCTTAGTTTCCAC 59.231 44.000 0.00 0.00 0.00 4.02
2638 2854 6.410504 GGCCTTAATATCCCTTAGTTTCCACT 60.411 42.308 0.00 0.00 36.99 4.00
2639 2855 7.202158 GGCCTTAATATCCCTTAGTTTCCACTA 60.202 40.741 0.00 0.00 34.06 2.74
2640 2856 7.878644 GCCTTAATATCCCTTAGTTTCCACTAG 59.121 40.741 0.00 0.00 36.81 2.57
2641 2857 8.376270 CCTTAATATCCCTTAGTTTCCACTAGG 58.624 40.741 0.00 0.00 36.81 3.02
2642 2858 9.155785 CTTAATATCCCTTAGTTTCCACTAGGA 57.844 37.037 0.00 0.00 43.93 2.94
2643 2859 6.997942 ATATCCCTTAGTTTCCACTAGGAC 57.002 41.667 0.00 0.00 45.73 3.85
2644 2860 3.447950 TCCCTTAGTTTCCACTAGGACC 58.552 50.000 0.00 0.00 45.73 4.46
2645 2861 2.504585 CCCTTAGTTTCCACTAGGACCC 59.495 54.545 0.00 0.00 45.73 4.46
2646 2862 2.504585 CCTTAGTTTCCACTAGGACCCC 59.495 54.545 0.00 0.00 45.73 4.95
2647 2863 1.856629 TAGTTTCCACTAGGACCCCG 58.143 55.000 0.00 0.00 45.73 5.73
2648 2864 1.078637 GTTTCCACTAGGACCCCGC 60.079 63.158 0.00 0.00 45.73 6.13
2649 2865 1.229400 TTTCCACTAGGACCCCGCT 60.229 57.895 0.00 0.00 45.73 5.52
2650 2866 1.550130 TTTCCACTAGGACCCCGCTG 61.550 60.000 0.00 0.00 45.73 5.18
2651 2867 4.162690 CCACTAGGACCCCGCTGC 62.163 72.222 0.00 0.00 36.89 5.25
2652 2868 3.390521 CACTAGGACCCCGCTGCA 61.391 66.667 0.00 0.00 0.00 4.41
2653 2869 2.606519 ACTAGGACCCCGCTGCAA 60.607 61.111 0.00 0.00 0.00 4.08
2654 2870 2.125106 CTAGGACCCCGCTGCAAC 60.125 66.667 0.00 0.00 0.00 4.17
2655 2871 4.077184 TAGGACCCCGCTGCAACG 62.077 66.667 1.65 1.65 0.00 4.10
2663 2879 4.077184 CGCTGCAACGGGAGGGTA 62.077 66.667 0.45 0.00 39.98 3.69
2664 2880 2.125106 GCTGCAACGGGAGGGTAG 60.125 66.667 0.00 0.00 32.28 3.18
2665 2881 2.584608 CTGCAACGGGAGGGTAGG 59.415 66.667 0.00 0.00 0.00 3.18
2666 2882 1.987855 CTGCAACGGGAGGGTAGGA 60.988 63.158 0.00 0.00 0.00 2.94
2667 2883 2.240162 CTGCAACGGGAGGGTAGGAC 62.240 65.000 0.00 0.00 0.00 3.85
2668 2884 2.288025 GCAACGGGAGGGTAGGACA 61.288 63.158 0.00 0.00 0.00 4.02
2669 2885 1.833787 GCAACGGGAGGGTAGGACAA 61.834 60.000 0.00 0.00 0.00 3.18
2670 2886 0.688487 CAACGGGAGGGTAGGACAAA 59.312 55.000 0.00 0.00 0.00 2.83
2671 2887 1.072648 CAACGGGAGGGTAGGACAAAA 59.927 52.381 0.00 0.00 0.00 2.44
2672 2888 0.981943 ACGGGAGGGTAGGACAAAAG 59.018 55.000 0.00 0.00 0.00 2.27
2673 2889 1.272807 CGGGAGGGTAGGACAAAAGA 58.727 55.000 0.00 0.00 0.00 2.52
2674 2890 1.838077 CGGGAGGGTAGGACAAAAGAT 59.162 52.381 0.00 0.00 0.00 2.40
2675 2891 2.420129 CGGGAGGGTAGGACAAAAGATG 60.420 54.545 0.00 0.00 0.00 2.90
2688 2904 5.779529 ACAAAAGATGTCATGCAAGTTCT 57.220 34.783 0.00 0.00 37.96 3.01
2689 2905 6.152932 ACAAAAGATGTCATGCAAGTTCTT 57.847 33.333 0.00 0.00 37.96 2.52
2690 2906 6.576185 ACAAAAGATGTCATGCAAGTTCTTT 58.424 32.000 0.00 1.16 37.96 2.52
2691 2907 7.043565 ACAAAAGATGTCATGCAAGTTCTTTT 58.956 30.769 16.58 16.58 41.14 2.27
2692 2908 7.223387 ACAAAAGATGTCATGCAAGTTCTTTTC 59.777 33.333 18.13 3.01 39.75 2.29
2693 2909 6.395426 AAGATGTCATGCAAGTTCTTTTCA 57.605 33.333 0.00 0.00 0.00 2.69
2694 2910 6.585695 AGATGTCATGCAAGTTCTTTTCAT 57.414 33.333 0.00 0.00 0.00 2.57
2695 2911 7.692460 AGATGTCATGCAAGTTCTTTTCATA 57.308 32.000 0.00 0.00 0.00 2.15
2696 2912 8.114331 AGATGTCATGCAAGTTCTTTTCATAA 57.886 30.769 0.00 0.00 0.00 1.90
2697 2913 8.242053 AGATGTCATGCAAGTTCTTTTCATAAG 58.758 33.333 0.00 0.00 0.00 1.73
2698 2914 6.151691 TGTCATGCAAGTTCTTTTCATAAGC 58.848 36.000 0.00 0.00 0.00 3.09
2699 2915 6.151691 GTCATGCAAGTTCTTTTCATAAGCA 58.848 36.000 0.00 0.00 0.00 3.91
2700 2916 6.088616 GTCATGCAAGTTCTTTTCATAAGCAC 59.911 38.462 0.00 0.00 31.79 4.40
2701 2917 4.536065 TGCAAGTTCTTTTCATAAGCACG 58.464 39.130 0.00 0.00 0.00 5.34
2702 2918 4.036262 TGCAAGTTCTTTTCATAAGCACGT 59.964 37.500 0.00 0.00 0.00 4.49
2703 2919 5.237561 TGCAAGTTCTTTTCATAAGCACGTA 59.762 36.000 0.00 0.00 0.00 3.57
2704 2920 6.072728 TGCAAGTTCTTTTCATAAGCACGTAT 60.073 34.615 0.00 0.00 0.00 3.06
2705 2921 6.249260 GCAAGTTCTTTTCATAAGCACGTATG 59.751 38.462 0.00 0.00 33.49 2.39
2706 2922 7.518161 CAAGTTCTTTTCATAAGCACGTATGA 58.482 34.615 2.68 2.68 38.45 2.15
2707 2923 7.061752 AGTTCTTTTCATAAGCACGTATGAC 57.938 36.000 5.88 0.00 39.62 3.06
2708 2924 6.874134 AGTTCTTTTCATAAGCACGTATGACT 59.126 34.615 5.88 0.00 39.62 3.41
2709 2925 8.033038 AGTTCTTTTCATAAGCACGTATGACTA 58.967 33.333 5.88 0.00 39.62 2.59
2710 2926 8.818057 GTTCTTTTCATAAGCACGTATGACTAT 58.182 33.333 5.88 0.00 39.62 2.12
2711 2927 8.942338 TCTTTTCATAAGCACGTATGACTATT 57.058 30.769 5.88 0.00 39.62 1.73
2712 2928 9.031360 TCTTTTCATAAGCACGTATGACTATTC 57.969 33.333 5.88 0.00 39.62 1.75
2713 2929 8.710835 TTTTCATAAGCACGTATGACTATTCA 57.289 30.769 5.88 0.00 39.62 2.57
2714 2930 7.694388 TTCATAAGCACGTATGACTATTCAC 57.306 36.000 5.88 0.00 39.62 3.18
2715 2931 5.912955 TCATAAGCACGTATGACTATTCACG 59.087 40.000 2.68 0.00 35.92 4.35
2716 2932 3.079960 AGCACGTATGACTATTCACGG 57.920 47.619 0.00 0.00 33.38 4.94
2717 2933 2.686405 AGCACGTATGACTATTCACGGA 59.314 45.455 0.00 0.00 33.38 4.69
2718 2934 3.129813 AGCACGTATGACTATTCACGGAA 59.870 43.478 0.00 0.00 33.38 4.30
2719 2935 4.049186 GCACGTATGACTATTCACGGAAT 58.951 43.478 0.00 4.82 33.38 3.01
2720 2936 5.009310 AGCACGTATGACTATTCACGGAATA 59.991 40.000 0.00 6.29 33.38 1.75
2721 2937 5.116680 GCACGTATGACTATTCACGGAATAC 59.883 44.000 0.00 0.00 33.38 1.89
2722 2938 6.203647 CACGTATGACTATTCACGGAATACA 58.796 40.000 0.00 2.53 33.38 2.29
2723 2939 6.861572 CACGTATGACTATTCACGGAATACAT 59.138 38.462 0.00 11.15 33.38 2.29
2724 2940 6.861572 ACGTATGACTATTCACGGAATACATG 59.138 38.462 13.75 0.00 33.38 3.21
2725 2941 6.183359 CGTATGACTATTCACGGAATACATGC 60.183 42.308 13.75 12.36 33.38 4.06
2726 2942 4.377021 TGACTATTCACGGAATACATGCC 58.623 43.478 0.00 0.00 33.95 4.40
2727 2943 4.100963 TGACTATTCACGGAATACATGCCT 59.899 41.667 0.00 0.00 33.95 4.75
2728 2944 5.303333 TGACTATTCACGGAATACATGCCTA 59.697 40.000 0.00 0.00 33.95 3.93
2729 2945 5.539048 ACTATTCACGGAATACATGCCTAC 58.461 41.667 0.00 0.00 33.95 3.18
2730 2946 3.897141 TTCACGGAATACATGCCTACA 57.103 42.857 0.00 0.00 0.00 2.74
2731 2947 4.415881 TTCACGGAATACATGCCTACAT 57.584 40.909 0.00 0.00 36.79 2.29
2732 2948 4.415881 TCACGGAATACATGCCTACATT 57.584 40.909 0.00 0.00 32.87 2.71
2733 2949 5.538849 TCACGGAATACATGCCTACATTA 57.461 39.130 0.00 0.00 32.87 1.90
2734 2950 5.294356 TCACGGAATACATGCCTACATTAC 58.706 41.667 0.00 0.00 32.87 1.89
2735 2951 5.053811 CACGGAATACATGCCTACATTACA 58.946 41.667 0.00 0.00 32.87 2.41
2736 2952 5.700832 CACGGAATACATGCCTACATTACAT 59.299 40.000 0.00 0.00 32.87 2.29
2737 2953 6.204688 CACGGAATACATGCCTACATTACATT 59.795 38.462 0.00 0.00 32.87 2.71
2738 2954 6.204688 ACGGAATACATGCCTACATTACATTG 59.795 38.462 0.00 0.00 32.87 2.82
2739 2955 6.426633 CGGAATACATGCCTACATTACATTGA 59.573 38.462 0.00 0.00 32.87 2.57
2740 2956 7.119699 CGGAATACATGCCTACATTACATTGAT 59.880 37.037 0.00 0.00 32.87 2.57
2741 2957 8.239314 GGAATACATGCCTACATTACATTGATG 58.761 37.037 0.00 0.00 32.87 3.07
2742 2958 8.922931 AATACATGCCTACATTACATTGATGA 57.077 30.769 0.00 0.00 32.87 2.92
2743 2959 8.922931 ATACATGCCTACATTACATTGATGAA 57.077 30.769 0.00 0.00 32.87 2.57
2744 2960 7.031226 ACATGCCTACATTACATTGATGAAC 57.969 36.000 0.00 0.00 32.87 3.18
2745 2961 6.830324 ACATGCCTACATTACATTGATGAACT 59.170 34.615 0.00 0.00 32.87 3.01
2746 2962 6.682423 TGCCTACATTACATTGATGAACTG 57.318 37.500 0.00 0.00 0.00 3.16
2747 2963 5.589855 TGCCTACATTACATTGATGAACTGG 59.410 40.000 0.00 0.00 0.00 4.00
2748 2964 5.822519 GCCTACATTACATTGATGAACTGGA 59.177 40.000 0.00 0.00 0.00 3.86
2749 2965 6.017605 GCCTACATTACATTGATGAACTGGAG 60.018 42.308 0.00 0.00 0.00 3.86
2750 2966 5.824904 ACATTACATTGATGAACTGGAGC 57.175 39.130 0.00 0.00 0.00 4.70
2751 2967 5.503927 ACATTACATTGATGAACTGGAGCT 58.496 37.500 0.00 0.00 0.00 4.09
2752 2968 6.653020 ACATTACATTGATGAACTGGAGCTA 58.347 36.000 0.00 0.00 0.00 3.32
2753 2969 6.765036 ACATTACATTGATGAACTGGAGCTAG 59.235 38.462 0.00 0.00 0.00 3.42
2754 2970 4.833478 ACATTGATGAACTGGAGCTAGT 57.167 40.909 0.00 0.00 0.00 2.57
2755 2971 5.171339 ACATTGATGAACTGGAGCTAGTT 57.829 39.130 1.40 1.40 43.24 2.24
2765 2981 6.658188 AACTGGAGCTAGTTCTATATCACC 57.342 41.667 6.54 0.00 36.16 4.02
2766 2982 5.081032 ACTGGAGCTAGTTCTATATCACCC 58.919 45.833 6.54 0.00 0.00 4.61
2767 2983 5.162925 ACTGGAGCTAGTTCTATATCACCCT 60.163 44.000 6.54 0.00 0.00 4.34
2768 2984 6.045695 ACTGGAGCTAGTTCTATATCACCCTA 59.954 42.308 6.54 0.00 0.00 3.53
2769 2985 7.045693 TGGAGCTAGTTCTATATCACCCTAT 57.954 40.000 6.54 0.00 0.00 2.57
2770 2986 6.892456 TGGAGCTAGTTCTATATCACCCTATG 59.108 42.308 6.54 0.00 0.00 2.23
2771 2987 6.893005 GGAGCTAGTTCTATATCACCCTATGT 59.107 42.308 6.54 0.00 0.00 2.29
2772 2988 7.397761 GGAGCTAGTTCTATATCACCCTATGTT 59.602 40.741 6.54 0.00 0.00 2.71
2773 2989 9.463902 GAGCTAGTTCTATATCACCCTATGTTA 57.536 37.037 0.00 0.00 0.00 2.41
2774 2990 9.998752 AGCTAGTTCTATATCACCCTATGTTAT 57.001 33.333 0.00 0.00 0.00 1.89
2786 3002 8.846943 TCACCCTATGTTATAACTATTGCATG 57.153 34.615 16.33 7.33 0.00 4.06
2787 3003 8.655901 TCACCCTATGTTATAACTATTGCATGA 58.344 33.333 16.33 9.22 0.00 3.07
2788 3004 8.939929 CACCCTATGTTATAACTATTGCATGAG 58.060 37.037 16.33 0.00 0.00 2.90
2789 3005 8.103305 ACCCTATGTTATAACTATTGCATGAGG 58.897 37.037 16.33 9.84 0.00 3.86
2790 3006 8.321353 CCCTATGTTATAACTATTGCATGAGGA 58.679 37.037 16.33 0.00 0.00 3.71
2791 3007 9.725019 CCTATGTTATAACTATTGCATGAGGAA 57.275 33.333 16.33 0.00 0.00 3.36
2794 3010 8.310406 TGTTATAACTATTGCATGAGGAATCG 57.690 34.615 16.33 0.00 37.05 3.34
2795 3011 5.869753 ATAACTATTGCATGAGGAATCGC 57.130 39.130 0.00 0.00 37.05 4.58
2796 3012 3.198409 ACTATTGCATGAGGAATCGCA 57.802 42.857 0.00 0.00 37.05 5.10
2797 3013 3.748083 ACTATTGCATGAGGAATCGCAT 58.252 40.909 0.00 0.00 37.05 4.73
2798 3014 3.750130 ACTATTGCATGAGGAATCGCATC 59.250 43.478 0.00 0.00 37.05 3.91
2799 3015 1.311859 TTGCATGAGGAATCGCATCC 58.688 50.000 0.00 0.00 39.96 3.51
2800 3016 0.881600 TGCATGAGGAATCGCATCCG 60.882 55.000 0.00 0.00 44.60 4.18
2801 3017 1.572085 GCATGAGGAATCGCATCCGG 61.572 60.000 0.00 0.00 44.60 5.14
2802 3018 1.302033 ATGAGGAATCGCATCCGGC 60.302 57.895 0.00 0.00 44.60 6.13
2803 3019 2.043604 ATGAGGAATCGCATCCGGCA 62.044 55.000 0.00 4.62 44.60 5.69
2804 3020 1.302033 GAGGAATCGCATCCGGCAT 60.302 57.895 0.00 0.00 44.60 4.40
2805 3021 0.037326 GAGGAATCGCATCCGGCATA 60.037 55.000 0.00 0.00 44.60 3.14
2806 3022 0.396435 AGGAATCGCATCCGGCATAA 59.604 50.000 0.00 0.00 44.60 1.90
2807 3023 1.003580 AGGAATCGCATCCGGCATAAT 59.996 47.619 0.00 0.00 44.60 1.28
2808 3024 1.812571 GGAATCGCATCCGGCATAATT 59.187 47.619 0.00 0.00 45.17 1.40
2809 3025 3.006940 GGAATCGCATCCGGCATAATTA 58.993 45.455 0.00 0.00 45.17 1.40
2810 3026 3.627577 GGAATCGCATCCGGCATAATTAT 59.372 43.478 0.00 0.00 45.17 1.28
2811 3027 4.260784 GGAATCGCATCCGGCATAATTATC 60.261 45.833 0.00 0.00 45.17 1.75
2812 3028 2.627945 TCGCATCCGGCATAATTATCC 58.372 47.619 0.00 0.03 45.17 2.59
2813 3029 2.027653 TCGCATCCGGCATAATTATCCA 60.028 45.455 0.00 0.00 45.17 3.41
2814 3030 2.945008 CGCATCCGGCATAATTATCCAT 59.055 45.455 0.00 0.00 45.17 3.41
2815 3031 3.002656 CGCATCCGGCATAATTATCCATC 59.997 47.826 0.00 0.00 45.17 3.51
2816 3032 3.947196 GCATCCGGCATAATTATCCATCA 59.053 43.478 0.00 0.00 43.97 3.07
2817 3033 4.201950 GCATCCGGCATAATTATCCATCAC 60.202 45.833 0.00 0.00 43.97 3.06
2818 3034 3.595173 TCCGGCATAATTATCCATCACG 58.405 45.455 0.00 0.00 0.00 4.35
2819 3035 2.677836 CCGGCATAATTATCCATCACGG 59.322 50.000 0.00 0.66 0.00 4.94
2828 3044 3.402186 TCCATCACGGATCCATTGC 57.598 52.632 13.41 0.00 39.64 3.56
2829 3045 0.179020 TCCATCACGGATCCATTGCC 60.179 55.000 13.41 0.00 39.64 4.52
2830 3046 0.179009 CCATCACGGATCCATTGCCT 60.179 55.000 13.41 0.00 36.56 4.75
2831 3047 1.072173 CCATCACGGATCCATTGCCTA 59.928 52.381 13.41 0.00 36.56 3.93
2832 3048 2.146342 CATCACGGATCCATTGCCTAC 58.854 52.381 13.41 0.00 0.00 3.18
2833 3049 0.104120 TCACGGATCCATTGCCTACG 59.896 55.000 13.41 0.00 0.00 3.51
2834 3050 0.104120 CACGGATCCATTGCCTACGA 59.896 55.000 13.41 0.00 0.00 3.43
2835 3051 0.389391 ACGGATCCATTGCCTACGAG 59.611 55.000 13.41 0.00 0.00 4.18
2836 3052 0.673985 CGGATCCATTGCCTACGAGA 59.326 55.000 13.41 0.00 0.00 4.04
2837 3053 1.273606 CGGATCCATTGCCTACGAGAT 59.726 52.381 13.41 0.00 0.00 2.75
2838 3054 2.289072 CGGATCCATTGCCTACGAGATT 60.289 50.000 13.41 0.00 0.00 2.40
2839 3055 3.744660 GGATCCATTGCCTACGAGATTT 58.255 45.455 6.95 0.00 0.00 2.17
2840 3056 4.137543 GGATCCATTGCCTACGAGATTTT 58.862 43.478 6.95 0.00 0.00 1.82
2841 3057 4.214332 GGATCCATTGCCTACGAGATTTTC 59.786 45.833 6.95 0.00 0.00 2.29
2842 3058 4.214986 TCCATTGCCTACGAGATTTTCA 57.785 40.909 0.00 0.00 0.00 2.69
2843 3059 4.780815 TCCATTGCCTACGAGATTTTCAT 58.219 39.130 0.00 0.00 0.00 2.57
2844 3060 5.924356 TCCATTGCCTACGAGATTTTCATA 58.076 37.500 0.00 0.00 0.00 2.15
2845 3061 6.533730 TCCATTGCCTACGAGATTTTCATAT 58.466 36.000 0.00 0.00 0.00 1.78
2846 3062 7.676004 TCCATTGCCTACGAGATTTTCATATA 58.324 34.615 0.00 0.00 0.00 0.86
2847 3063 8.321353 TCCATTGCCTACGAGATTTTCATATAT 58.679 33.333 0.00 0.00 0.00 0.86
2848 3064 8.950210 CCATTGCCTACGAGATTTTCATATATT 58.050 33.333 0.00 0.00 0.00 1.28
2849 3065 9.764870 CATTGCCTACGAGATTTTCATATATTG 57.235 33.333 0.00 0.00 0.00 1.90
2850 3066 8.902540 TTGCCTACGAGATTTTCATATATTGT 57.097 30.769 0.00 0.00 0.00 2.71
2851 3067 8.902540 TGCCTACGAGATTTTCATATATTGTT 57.097 30.769 0.00 0.00 0.00 2.83
2852 3068 8.988934 TGCCTACGAGATTTTCATATATTGTTC 58.011 33.333 0.00 0.00 0.00 3.18
2853 3069 9.209175 GCCTACGAGATTTTCATATATTGTTCT 57.791 33.333 0.00 0.00 0.00 3.01
2857 3073 8.276325 ACGAGATTTTCATATATTGTTCTTCGC 58.724 33.333 0.00 0.00 0.00 4.70
2858 3074 8.491152 CGAGATTTTCATATATTGTTCTTCGCT 58.509 33.333 0.00 0.00 0.00 4.93
2872 3088 8.483743 TTGTTCTTCGCTTATTTACTTTTTCG 57.516 30.769 0.00 0.00 0.00 3.46
2873 3089 7.632721 TGTTCTTCGCTTATTTACTTTTTCGT 58.367 30.769 0.00 0.00 0.00 3.85
2874 3090 8.124199 TGTTCTTCGCTTATTTACTTTTTCGTT 58.876 29.630 0.00 0.00 0.00 3.85
2875 3091 8.407458 GTTCTTCGCTTATTTACTTTTTCGTTG 58.593 33.333 0.00 0.00 0.00 4.10
2876 3092 6.575942 TCTTCGCTTATTTACTTTTTCGTTGC 59.424 34.615 0.00 0.00 0.00 4.17
2877 3093 5.992729 TCGCTTATTTACTTTTTCGTTGCT 58.007 33.333 0.00 0.00 0.00 3.91
2878 3094 7.119605 TCGCTTATTTACTTTTTCGTTGCTA 57.880 32.000 0.00 0.00 0.00 3.49
2879 3095 7.011189 TCGCTTATTTACTTTTTCGTTGCTAC 58.989 34.615 0.00 0.00 0.00 3.58
2880 3096 7.013529 CGCTTATTTACTTTTTCGTTGCTACT 58.986 34.615 0.00 0.00 0.00 2.57
2881 3097 7.006210 CGCTTATTTACTTTTTCGTTGCTACTG 59.994 37.037 0.00 0.00 0.00 2.74
2882 3098 7.801783 GCTTATTTACTTTTTCGTTGCTACTGT 59.198 33.333 0.00 0.00 0.00 3.55
2883 3099 9.659830 CTTATTTACTTTTTCGTTGCTACTGTT 57.340 29.630 0.00 0.00 0.00 3.16
2885 3101 8.998558 ATTTACTTTTTCGTTGCTACTGTTAC 57.001 30.769 0.00 0.00 0.00 2.50
2886 3102 7.536895 TTACTTTTTCGTTGCTACTGTTACA 57.463 32.000 0.00 0.00 0.00 2.41
2887 3103 6.425577 ACTTTTTCGTTGCTACTGTTACAA 57.574 33.333 0.00 0.00 0.00 2.41
2888 3104 7.023197 ACTTTTTCGTTGCTACTGTTACAAT 57.977 32.000 0.00 0.00 0.00 2.71
2889 3105 7.477494 ACTTTTTCGTTGCTACTGTTACAATT 58.523 30.769 0.00 0.00 0.00 2.32
2890 3106 8.614346 ACTTTTTCGTTGCTACTGTTACAATTA 58.386 29.630 0.00 0.00 0.00 1.40
2891 3107 8.770850 TTTTTCGTTGCTACTGTTACAATTAC 57.229 30.769 0.00 0.00 0.00 1.89
2892 3108 7.718272 TTTCGTTGCTACTGTTACAATTACT 57.282 32.000 0.00 0.00 0.00 2.24
2893 3109 8.815141 TTTCGTTGCTACTGTTACAATTACTA 57.185 30.769 0.00 0.00 0.00 1.82
2894 3110 8.991243 TTCGTTGCTACTGTTACAATTACTAT 57.009 30.769 0.00 0.00 0.00 2.12
2924 3140 9.541143 AACCCAAAACATTTATCTTTACTGTTG 57.459 29.630 0.00 0.00 30.90 3.33
2925 3141 7.655732 ACCCAAAACATTTATCTTTACTGTTGC 59.344 33.333 0.00 0.00 30.90 4.17
2926 3142 7.872483 CCCAAAACATTTATCTTTACTGTTGCT 59.128 33.333 0.00 0.00 30.90 3.91
2927 3143 9.906660 CCAAAACATTTATCTTTACTGTTGCTA 57.093 29.630 0.00 0.00 30.90 3.49
2931 3147 8.848474 ACATTTATCTTTACTGTTGCTACTGT 57.152 30.769 14.41 14.41 39.43 3.55
2932 3148 9.284968 ACATTTATCTTTACTGTTGCTACTGTT 57.715 29.630 15.09 1.25 37.57 3.16
2935 3151 8.767478 TTATCTTTACTGTTGCTACTGTTACC 57.233 34.615 15.09 0.00 37.57 2.85
2936 3152 6.164417 TCTTTACTGTTGCTACTGTTACCA 57.836 37.500 15.09 0.00 37.57 3.25
2937 3153 5.987347 TCTTTACTGTTGCTACTGTTACCAC 59.013 40.000 15.09 0.00 37.57 4.16
2938 3154 5.540400 TTACTGTTGCTACTGTTACCACT 57.460 39.130 15.09 0.00 37.57 4.00
2939 3155 6.653526 TTACTGTTGCTACTGTTACCACTA 57.346 37.500 15.09 0.00 37.57 2.74
2940 3156 4.879598 ACTGTTGCTACTGTTACCACTAC 58.120 43.478 5.06 0.00 33.21 2.73
2941 3157 4.587684 ACTGTTGCTACTGTTACCACTACT 59.412 41.667 5.06 0.00 33.21 2.57
2942 3158 5.771666 ACTGTTGCTACTGTTACCACTACTA 59.228 40.000 5.06 0.00 33.21 1.82
2943 3159 6.436532 ACTGTTGCTACTGTTACCACTACTAT 59.563 38.462 5.06 0.00 33.21 2.12
2944 3160 6.860080 TGTTGCTACTGTTACCACTACTATC 58.140 40.000 0.00 0.00 0.00 2.08
2945 3161 6.434965 TGTTGCTACTGTTACCACTACTATCA 59.565 38.462 0.00 0.00 0.00 2.15
2946 3162 7.123697 TGTTGCTACTGTTACCACTACTATCAT 59.876 37.037 0.00 0.00 0.00 2.45
2947 3163 8.627403 GTTGCTACTGTTACCACTACTATCATA 58.373 37.037 0.00 0.00 0.00 2.15
2948 3164 8.756486 TGCTACTGTTACCACTACTATCATAA 57.244 34.615 0.00 0.00 0.00 1.90
2949 3165 8.627403 TGCTACTGTTACCACTACTATCATAAC 58.373 37.037 0.00 0.00 0.00 1.89
2950 3166 8.627403 GCTACTGTTACCACTACTATCATAACA 58.373 37.037 0.00 0.00 32.98 2.41
2951 3167 9.947669 CTACTGTTACCACTACTATCATAACAC 57.052 37.037 0.00 0.00 31.24 3.32
2952 3168 8.591114 ACTGTTACCACTACTATCATAACACT 57.409 34.615 0.00 0.00 31.24 3.55
2953 3169 9.032624 ACTGTTACCACTACTATCATAACACTT 57.967 33.333 0.00 0.00 31.24 3.16
2954 3170 9.871238 CTGTTACCACTACTATCATAACACTTT 57.129 33.333 0.00 0.00 31.24 2.66
2975 3191 9.543018 CACTTTTACTACTAAATACTTTGCTGC 57.457 33.333 0.00 0.00 0.00 5.25
2976 3192 9.280174 ACTTTTACTACTAAATACTTTGCTGCA 57.720 29.630 0.00 0.00 0.00 4.41
2977 3193 9.760660 CTTTTACTACTAAATACTTTGCTGCAG 57.239 33.333 10.11 10.11 0.00 4.41
2978 3194 9.496873 TTTTACTACTAAATACTTTGCTGCAGA 57.503 29.630 20.43 0.00 0.00 4.26
2979 3195 9.667107 TTTACTACTAAATACTTTGCTGCAGAT 57.333 29.630 20.43 0.00 0.00 2.90
2981 3197 8.649973 ACTACTAAATACTTTGCTGCAGATAC 57.350 34.615 20.43 0.00 0.00 2.24
2982 3198 8.478877 ACTACTAAATACTTTGCTGCAGATACT 58.521 33.333 20.43 0.00 0.00 2.12
2983 3199 9.967346 CTACTAAATACTTTGCTGCAGATACTA 57.033 33.333 20.43 0.00 0.00 1.82
2985 3201 9.319143 ACTAAATACTTTGCTGCAGATACTAAG 57.681 33.333 20.43 14.24 0.00 2.18
2986 3202 9.319143 CTAAATACTTTGCTGCAGATACTAAGT 57.681 33.333 20.43 18.89 0.00 2.24
2987 3203 8.567285 AAATACTTTGCTGCAGATACTAAGTT 57.433 30.769 20.43 6.88 0.00 2.66
2988 3204 9.667107 AAATACTTTGCTGCAGATACTAAGTTA 57.333 29.630 20.43 7.94 0.00 2.24
2989 3205 9.838339 AATACTTTGCTGCAGATACTAAGTTAT 57.162 29.630 20.43 7.91 0.00 1.89
2990 3206 7.778470 ACTTTGCTGCAGATACTAAGTTATC 57.222 36.000 20.43 0.00 0.00 1.75
2991 3207 6.763610 ACTTTGCTGCAGATACTAAGTTATCC 59.236 38.462 20.43 0.00 0.00 2.59
2992 3208 5.869649 TGCTGCAGATACTAAGTTATCCA 57.130 39.130 20.43 0.00 0.00 3.41
2993 3209 5.847304 TGCTGCAGATACTAAGTTATCCAG 58.153 41.667 20.43 0.00 0.00 3.86
2994 3210 5.221521 TGCTGCAGATACTAAGTTATCCAGG 60.222 44.000 20.43 0.00 0.00 4.45
2995 3211 5.221541 GCTGCAGATACTAAGTTATCCAGGT 60.222 44.000 20.43 0.00 0.00 4.00
2996 3212 6.161855 TGCAGATACTAAGTTATCCAGGTG 57.838 41.667 0.00 0.00 0.00 4.00
2997 3213 5.661312 TGCAGATACTAAGTTATCCAGGTGT 59.339 40.000 0.00 0.00 0.00 4.16
2998 3214 5.986135 GCAGATACTAAGTTATCCAGGTGTG 59.014 44.000 0.00 0.00 0.00 3.82
2999 3215 6.516718 CAGATACTAAGTTATCCAGGTGTGG 58.483 44.000 0.00 0.00 46.63 4.17
3000 3216 6.098409 CAGATACTAAGTTATCCAGGTGTGGT 59.902 42.308 0.00 0.00 45.28 4.16
3001 3217 4.553330 ACTAAGTTATCCAGGTGTGGTG 57.447 45.455 0.00 0.00 45.28 4.17
3002 3218 2.879103 AAGTTATCCAGGTGTGGTGG 57.121 50.000 0.00 0.00 45.28 4.61
3007 3223 3.743714 TCCAGGTGTGGTGGAATTG 57.256 52.632 0.00 0.00 45.28 2.32
3008 3224 1.144691 TCCAGGTGTGGTGGAATTGA 58.855 50.000 0.00 0.00 45.28 2.57
3009 3225 1.202879 TCCAGGTGTGGTGGAATTGAC 60.203 52.381 0.00 0.00 45.28 3.18
3010 3226 1.478471 CCAGGTGTGGTGGAATTGACA 60.478 52.381 0.00 0.00 39.30 3.58
3011 3227 2.305928 CAGGTGTGGTGGAATTGACAA 58.694 47.619 0.00 0.00 0.00 3.18
3012 3228 2.034558 CAGGTGTGGTGGAATTGACAAC 59.965 50.000 0.00 0.00 0.00 3.32
3013 3229 2.091885 AGGTGTGGTGGAATTGACAACT 60.092 45.455 0.00 0.00 31.37 3.16
3014 3230 2.293399 GGTGTGGTGGAATTGACAACTC 59.707 50.000 0.00 0.00 0.00 3.01
3015 3231 2.948979 GTGTGGTGGAATTGACAACTCA 59.051 45.455 0.00 0.00 0.00 3.41
3016 3232 3.380004 GTGTGGTGGAATTGACAACTCAA 59.620 43.478 0.00 0.00 40.77 3.02
3017 3233 3.380004 TGTGGTGGAATTGACAACTCAAC 59.620 43.478 0.00 0.00 39.28 3.18
3018 3234 3.632145 GTGGTGGAATTGACAACTCAACT 59.368 43.478 4.28 0.00 39.28 3.16
3019 3235 3.631686 TGGTGGAATTGACAACTCAACTG 59.368 43.478 4.28 0.00 39.28 3.16
3020 3236 3.550842 GGTGGAATTGACAACTCAACTGC 60.551 47.826 4.28 0.00 39.28 4.40
3021 3237 3.316308 GTGGAATTGACAACTCAACTGCT 59.684 43.478 0.00 0.00 39.28 4.24
3022 3238 4.515191 GTGGAATTGACAACTCAACTGCTA 59.485 41.667 0.00 0.00 39.28 3.49
3023 3239 5.008613 GTGGAATTGACAACTCAACTGCTAA 59.991 40.000 0.00 0.00 39.28 3.09
3024 3240 5.008613 TGGAATTGACAACTCAACTGCTAAC 59.991 40.000 0.00 0.00 39.28 2.34
3025 3241 5.008613 GGAATTGACAACTCAACTGCTAACA 59.991 40.000 0.00 0.00 39.28 2.41
3026 3242 4.875544 TTGACAACTCAACTGCTAACAC 57.124 40.909 0.00 0.00 31.00 3.32
3027 3243 4.137116 TGACAACTCAACTGCTAACACT 57.863 40.909 0.00 0.00 0.00 3.55
3028 3244 4.119862 TGACAACTCAACTGCTAACACTC 58.880 43.478 0.00 0.00 0.00 3.51
3029 3245 4.119862 GACAACTCAACTGCTAACACTCA 58.880 43.478 0.00 0.00 0.00 3.41
3030 3246 4.513442 ACAACTCAACTGCTAACACTCAA 58.487 39.130 0.00 0.00 0.00 3.02
3031 3247 4.572389 ACAACTCAACTGCTAACACTCAAG 59.428 41.667 0.00 0.00 0.00 3.02
3032 3248 4.672587 ACTCAACTGCTAACACTCAAGA 57.327 40.909 0.00 0.00 0.00 3.02
3033 3249 5.023533 ACTCAACTGCTAACACTCAAGAA 57.976 39.130 0.00 0.00 0.00 2.52
3034 3250 5.615289 ACTCAACTGCTAACACTCAAGAAT 58.385 37.500 0.00 0.00 0.00 2.40
3035 3251 6.759272 ACTCAACTGCTAACACTCAAGAATA 58.241 36.000 0.00 0.00 0.00 1.75
3036 3252 7.390027 ACTCAACTGCTAACACTCAAGAATAT 58.610 34.615 0.00 0.00 0.00 1.28
3037 3253 7.880195 ACTCAACTGCTAACACTCAAGAATATT 59.120 33.333 0.00 0.00 0.00 1.28
3038 3254 8.256611 TCAACTGCTAACACTCAAGAATATTC 57.743 34.615 7.41 7.41 0.00 1.75
3039 3255 8.097038 TCAACTGCTAACACTCAAGAATATTCT 58.903 33.333 12.37 12.37 39.74 2.40
3041 3257 8.854614 ACTGCTAACACTCAAGAATATTCTTT 57.145 30.769 24.94 13.81 44.70 2.52
3042 3258 8.725148 ACTGCTAACACTCAAGAATATTCTTTG 58.275 33.333 24.94 22.03 44.70 2.77
3043 3259 8.044060 TGCTAACACTCAAGAATATTCTTTGG 57.956 34.615 24.94 21.05 44.70 3.28
3044 3260 6.969473 GCTAACACTCAAGAATATTCTTTGGC 59.031 38.462 24.94 18.87 44.70 4.52
3045 3261 7.148171 GCTAACACTCAAGAATATTCTTTGGCT 60.148 37.037 24.94 15.33 44.70 4.75
3046 3262 6.749923 ACACTCAAGAATATTCTTTGGCTC 57.250 37.500 24.94 0.00 44.70 4.70
3047 3263 5.649831 ACACTCAAGAATATTCTTTGGCTCC 59.350 40.000 24.94 0.00 44.70 4.70
3048 3264 5.067023 CACTCAAGAATATTCTTTGGCTCCC 59.933 44.000 24.94 0.00 44.70 4.30
3049 3265 4.536765 TCAAGAATATTCTTTGGCTCCCC 58.463 43.478 24.94 0.00 44.70 4.81
3050 3266 4.230502 TCAAGAATATTCTTTGGCTCCCCT 59.769 41.667 24.94 0.94 44.70 4.79
3051 3267 4.888626 AGAATATTCTTTGGCTCCCCTT 57.111 40.909 12.37 0.00 32.55 3.95
3052 3268 4.540715 AGAATATTCTTTGGCTCCCCTTG 58.459 43.478 12.37 0.00 32.55 3.61
3053 3269 4.017130 AGAATATTCTTTGGCTCCCCTTGT 60.017 41.667 12.37 0.00 32.55 3.16
3054 3270 1.928868 ATTCTTTGGCTCCCCTTGTG 58.071 50.000 0.00 0.00 0.00 3.33
3055 3271 0.555769 TTCTTTGGCTCCCCTTGTGT 59.444 50.000 0.00 0.00 0.00 3.72
3056 3272 0.555769 TCTTTGGCTCCCCTTGTGTT 59.444 50.000 0.00 0.00 0.00 3.32
3057 3273 0.675633 CTTTGGCTCCCCTTGTGTTG 59.324 55.000 0.00 0.00 0.00 3.33
3058 3274 0.260230 TTTGGCTCCCCTTGTGTTGA 59.740 50.000 0.00 0.00 0.00 3.18
3059 3275 0.260230 TTGGCTCCCCTTGTGTTGAA 59.740 50.000 0.00 0.00 0.00 2.69
3060 3276 0.482446 TGGCTCCCCTTGTGTTGAAT 59.518 50.000 0.00 0.00 0.00 2.57
3061 3277 1.177401 GGCTCCCCTTGTGTTGAATC 58.823 55.000 0.00 0.00 0.00 2.52
3062 3278 1.547675 GGCTCCCCTTGTGTTGAATCA 60.548 52.381 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 5.922544 GCAAGATTAAATTGTGCAAGAGTGT 59.077 36.000 0.00 0.00 35.28 3.55
58 59 3.430929 GCTCGTCATTATCAAGTGGGTCT 60.431 47.826 0.00 0.00 0.00 3.85
105 106 5.491982 GTTGACCTAATTCTCACTCCATGT 58.508 41.667 0.00 0.00 0.00 3.21
113 114 6.778821 TGAATTCTGGTTGACCTAATTCTCA 58.221 36.000 25.01 14.58 42.69 3.27
263 332 3.025978 GGGACCAATGCAAATGAGATGA 58.974 45.455 4.54 0.00 0.00 2.92
513 594 1.681486 CCACAACCCGGGCACTTTTT 61.681 55.000 24.08 2.35 0.00 1.94
640 721 5.589452 GCCTTCTCACATTGAATCATCTTCT 59.411 40.000 0.00 0.00 0.00 2.85
666 750 8.301252 TCTACCTTACAATGTGCTTCATACTA 57.699 34.615 0.00 0.00 35.48 1.82
717 801 4.435121 GCAAGCAATTCAGCATTAACAAGC 60.435 41.667 0.00 0.00 36.85 4.01
791 875 5.470098 TCAAGCAAAGGTACAACATCTTCTC 59.530 40.000 0.00 0.00 0.00 2.87
823 907 6.071320 AGAAACAATAAGAAGGCAGGAAAGT 58.929 36.000 0.00 0.00 0.00 2.66
1001 1096 4.365514 TTTTCTCCAGTTGCTATGTCCA 57.634 40.909 0.00 0.00 0.00 4.02
1112 1207 0.039911 AGACCGTCTAGCTGTCCCTT 59.960 55.000 0.00 0.00 32.62 3.95
1174 1269 1.344438 CTTTGGCCTTGGTTCTTTCCC 59.656 52.381 3.32 0.00 0.00 3.97
1179 1274 0.113190 CCCTCTTTGGCCTTGGTTCT 59.887 55.000 3.32 0.00 0.00 3.01
1204 1299 1.425066 TGCAAAGGGATCACTTGGTCT 59.575 47.619 11.90 0.00 0.00 3.85
1329 1425 7.046652 TCTCTTTTGATTTCTGCTCAGGATAG 58.953 38.462 0.00 0.00 0.00 2.08
1330 1426 6.950842 TCTCTTTTGATTTCTGCTCAGGATA 58.049 36.000 0.00 0.00 0.00 2.59
1336 1432 4.458642 AGCCTTCTCTTTTGATTTCTGCTC 59.541 41.667 0.00 0.00 0.00 4.26
1502 1601 4.534500 TGGAGTCTAGCAAAAGGATACCAA 59.466 41.667 0.00 0.00 37.17 3.67
1519 1618 7.652727 AGTTTAGCAAAAGAGATTTTGGAGTC 58.347 34.615 13.58 0.00 41.04 3.36
1546 1645 8.584157 AGAGGTAGATGTTATCAAAGCTGATAG 58.416 37.037 0.00 0.00 43.75 2.08
1698 1848 8.306313 TGGAACATATACTATGAGTGTCAAGT 57.694 34.615 1.33 0.00 0.00 3.16
2011 2213 7.814107 TCTGCCAAAATAAGCAAGAGTTAAATG 59.186 33.333 0.00 0.00 38.82 2.32
2132 2337 3.586470 TGTAAGGCAAGTCCAAAGGAA 57.414 42.857 0.00 0.00 37.29 3.36
2133 2338 3.586470 TTGTAAGGCAAGTCCAAAGGA 57.414 42.857 0.00 0.00 37.29 3.36
2242 2453 4.517453 TCCTTTAACCAGATTTTGACACCG 59.483 41.667 0.00 0.00 0.00 4.94
2384 2598 3.988379 TTTCACATGCAGAACCAGTTC 57.012 42.857 2.19 2.19 39.78 3.01
2484 2698 9.184523 CAGGGATAACAGTCCATTTGTTATTTA 57.815 33.333 10.81 0.00 46.34 1.40
2546 2762 0.988832 TTGGTTCTCTGGCCGGTAAT 59.011 50.000 12.43 0.00 0.00 1.89
2579 2795 2.817844 AGAACCGGACCAAAGCATTAAC 59.182 45.455 9.46 0.00 0.00 2.01
2580 2796 3.078837 GAGAACCGGACCAAAGCATTAA 58.921 45.455 9.46 0.00 0.00 1.40
2581 2797 2.304761 AGAGAACCGGACCAAAGCATTA 59.695 45.455 9.46 0.00 0.00 1.90
2582 2798 1.073923 AGAGAACCGGACCAAAGCATT 59.926 47.619 9.46 0.00 0.00 3.56
2583 2799 0.693049 AGAGAACCGGACCAAAGCAT 59.307 50.000 9.46 0.00 0.00 3.79
2584 2800 0.034896 GAGAGAACCGGACCAAAGCA 59.965 55.000 9.46 0.00 0.00 3.91
2585 2801 0.321996 AGAGAGAACCGGACCAAAGC 59.678 55.000 9.46 0.00 0.00 3.51
2586 2802 2.841442 AAGAGAGAACCGGACCAAAG 57.159 50.000 9.46 0.00 0.00 2.77
2587 2803 4.693042 TTTAAGAGAGAACCGGACCAAA 57.307 40.909 9.46 0.00 0.00 3.28
2588 2804 4.504340 CCTTTTAAGAGAGAACCGGACCAA 60.504 45.833 9.46 0.00 0.00 3.67
2589 2805 3.007614 CCTTTTAAGAGAGAACCGGACCA 59.992 47.826 9.46 0.00 0.00 4.02
2590 2806 3.260128 TCCTTTTAAGAGAGAACCGGACC 59.740 47.826 9.46 0.00 0.00 4.46
2591 2807 4.496360 CTCCTTTTAAGAGAGAACCGGAC 58.504 47.826 9.46 0.99 32.86 4.79
2592 2808 3.514309 CCTCCTTTTAAGAGAGAACCGGA 59.486 47.826 9.46 0.00 32.86 5.14
2593 2809 3.863041 CCTCCTTTTAAGAGAGAACCGG 58.137 50.000 0.00 0.00 32.86 5.28
2594 2810 3.263261 GCCTCCTTTTAAGAGAGAACCG 58.737 50.000 0.00 0.00 32.86 4.44
2595 2811 3.264706 AGGCCTCCTTTTAAGAGAGAACC 59.735 47.826 0.00 9.06 32.86 3.62
2596 2812 4.561500 AGGCCTCCTTTTAAGAGAGAAC 57.438 45.455 0.00 3.54 32.86 3.01
2597 2813 6.697641 TTAAGGCCTCCTTTTAAGAGAGAA 57.302 37.500 5.23 0.00 41.69 2.87
2598 2814 6.893020 ATTAAGGCCTCCTTTTAAGAGAGA 57.107 37.500 5.23 0.00 41.69 3.10
2599 2815 7.880713 GGATATTAAGGCCTCCTTTTAAGAGAG 59.119 40.741 5.23 0.00 41.69 3.20
2600 2816 7.202195 GGGATATTAAGGCCTCCTTTTAAGAGA 60.202 40.741 5.23 0.00 41.69 3.10
2601 2817 6.943146 GGGATATTAAGGCCTCCTTTTAAGAG 59.057 42.308 5.23 0.00 41.69 2.85
2602 2818 6.624021 AGGGATATTAAGGCCTCCTTTTAAGA 59.376 38.462 5.23 0.00 41.69 2.10
2603 2819 6.853490 AGGGATATTAAGGCCTCCTTTTAAG 58.147 40.000 5.23 0.00 41.69 1.85
2604 2820 6.858792 AGGGATATTAAGGCCTCCTTTTAA 57.141 37.500 5.23 0.00 41.69 1.52
2605 2821 6.858792 AAGGGATATTAAGGCCTCCTTTTA 57.141 37.500 5.23 0.00 41.69 1.52
2606 2822 5.751142 AAGGGATATTAAGGCCTCCTTTT 57.249 39.130 5.23 0.00 41.69 2.27
2607 2823 5.917682 ACTAAGGGATATTAAGGCCTCCTTT 59.082 40.000 21.13 14.92 41.69 3.11
2608 2824 5.487273 ACTAAGGGATATTAAGGCCTCCTT 58.513 41.667 20.12 20.12 46.63 3.36
2609 2825 5.107979 ACTAAGGGATATTAAGGCCTCCT 57.892 43.478 5.23 2.68 33.87 3.69
2610 2826 5.844773 AACTAAGGGATATTAAGGCCTCC 57.155 43.478 5.23 0.63 0.00 4.30
2611 2827 6.183361 TGGAAACTAAGGGATATTAAGGCCTC 60.183 42.308 5.23 0.00 0.00 4.70
2612 2828 5.674958 TGGAAACTAAGGGATATTAAGGCCT 59.325 40.000 0.00 0.00 0.00 5.19
2613 2829 5.768662 GTGGAAACTAAGGGATATTAAGGCC 59.231 44.000 0.00 0.00 0.00 5.19
2614 2830 6.602278 AGTGGAAACTAAGGGATATTAAGGC 58.398 40.000 0.00 0.00 0.00 4.35
2615 2831 8.376270 CCTAGTGGAAACTAAGGGATATTAAGG 58.624 40.741 0.00 0.00 34.57 2.69
2616 2832 9.155785 TCCTAGTGGAAACTAAGGGATATTAAG 57.844 37.037 0.00 0.00 39.87 1.85
2617 2833 8.931568 GTCCTAGTGGAAACTAAGGGATATTAA 58.068 37.037 0.00 0.00 45.18 1.40
2618 2834 7.511714 GGTCCTAGTGGAAACTAAGGGATATTA 59.488 40.741 0.00 0.00 45.18 0.98
2619 2835 6.329460 GGTCCTAGTGGAAACTAAGGGATATT 59.671 42.308 0.00 0.00 45.18 1.28
2620 2836 5.845065 GGTCCTAGTGGAAACTAAGGGATAT 59.155 44.000 0.00 0.00 45.18 1.63
2621 2837 5.214293 GGTCCTAGTGGAAACTAAGGGATA 58.786 45.833 0.00 0.00 45.18 2.59
2622 2838 4.038633 GGTCCTAGTGGAAACTAAGGGAT 58.961 47.826 0.00 0.00 45.18 3.85
2623 2839 3.447950 GGTCCTAGTGGAAACTAAGGGA 58.552 50.000 0.00 0.00 45.18 4.20
2624 2840 2.504585 GGGTCCTAGTGGAAACTAAGGG 59.495 54.545 0.00 0.00 45.18 3.95
2625 2841 2.504585 GGGGTCCTAGTGGAAACTAAGG 59.495 54.545 0.00 0.00 45.18 2.69
2626 2842 2.167900 CGGGGTCCTAGTGGAAACTAAG 59.832 54.545 0.00 0.00 45.18 2.18
2627 2843 2.181975 CGGGGTCCTAGTGGAAACTAA 58.818 52.381 0.00 0.00 45.18 2.24
2628 2844 1.856629 CGGGGTCCTAGTGGAAACTA 58.143 55.000 0.00 0.00 45.18 2.24
2629 2845 1.551019 GCGGGGTCCTAGTGGAAACT 61.551 60.000 0.00 0.00 45.18 2.66
2630 2846 1.078637 GCGGGGTCCTAGTGGAAAC 60.079 63.158 0.00 0.00 45.18 2.78
2631 2847 1.229400 AGCGGGGTCCTAGTGGAAA 60.229 57.895 0.00 0.00 45.18 3.13
2632 2848 1.987855 CAGCGGGGTCCTAGTGGAA 60.988 63.158 0.00 0.00 45.18 3.53
2633 2849 2.363795 CAGCGGGGTCCTAGTGGA 60.364 66.667 0.00 0.00 40.69 4.02
2634 2850 4.162690 GCAGCGGGGTCCTAGTGG 62.163 72.222 0.00 0.00 0.00 4.00
2635 2851 2.954684 TTGCAGCGGGGTCCTAGTG 61.955 63.158 0.00 0.00 0.00 2.74
2636 2852 2.606519 TTGCAGCGGGGTCCTAGT 60.607 61.111 0.00 0.00 0.00 2.57
2637 2853 2.125106 GTTGCAGCGGGGTCCTAG 60.125 66.667 0.00 0.00 0.00 3.02
2638 2854 4.077184 CGTTGCAGCGGGGTCCTA 62.077 66.667 15.84 0.00 0.00 2.94
2646 2862 4.077184 TACCCTCCCGTTGCAGCG 62.077 66.667 16.72 16.72 0.00 5.18
2647 2863 2.125106 CTACCCTCCCGTTGCAGC 60.125 66.667 0.00 0.00 0.00 5.25
2648 2864 1.987855 TCCTACCCTCCCGTTGCAG 60.988 63.158 0.00 0.00 0.00 4.41
2649 2865 2.120940 TCCTACCCTCCCGTTGCA 59.879 61.111 0.00 0.00 0.00 4.08
2650 2866 1.833787 TTGTCCTACCCTCCCGTTGC 61.834 60.000 0.00 0.00 0.00 4.17
2651 2867 0.688487 TTTGTCCTACCCTCCCGTTG 59.312 55.000 0.00 0.00 0.00 4.10
2652 2868 1.350019 CTTTTGTCCTACCCTCCCGTT 59.650 52.381 0.00 0.00 0.00 4.44
2653 2869 0.981943 CTTTTGTCCTACCCTCCCGT 59.018 55.000 0.00 0.00 0.00 5.28
2654 2870 1.272807 TCTTTTGTCCTACCCTCCCG 58.727 55.000 0.00 0.00 0.00 5.14
2655 2871 2.576648 ACATCTTTTGTCCTACCCTCCC 59.423 50.000 0.00 0.00 30.89 4.30
2666 2882 5.779529 AGAACTTGCATGACATCTTTTGT 57.220 34.783 6.60 0.00 42.79 2.83
2667 2883 7.223193 TGAAAAGAACTTGCATGACATCTTTTG 59.777 33.333 28.07 0.00 43.36 2.44
2668 2884 7.267128 TGAAAAGAACTTGCATGACATCTTTT 58.733 30.769 25.89 25.89 44.97 2.27
2669 2885 6.808829 TGAAAAGAACTTGCATGACATCTTT 58.191 32.000 17.95 17.95 38.40 2.52
2670 2886 6.395426 TGAAAAGAACTTGCATGACATCTT 57.605 33.333 6.60 9.66 0.00 2.40
2671 2887 6.585695 ATGAAAAGAACTTGCATGACATCT 57.414 33.333 6.60 4.38 0.00 2.90
2672 2888 7.008992 GCTTATGAAAAGAACTTGCATGACATC 59.991 37.037 6.60 2.21 0.00 3.06
2673 2889 6.810182 GCTTATGAAAAGAACTTGCATGACAT 59.190 34.615 6.60 0.00 0.00 3.06
2674 2890 6.151691 GCTTATGAAAAGAACTTGCATGACA 58.848 36.000 6.60 0.00 0.00 3.58
2675 2891 6.088616 GTGCTTATGAAAAGAACTTGCATGAC 59.911 38.462 6.60 0.54 0.00 3.06
2676 2892 6.151691 GTGCTTATGAAAAGAACTTGCATGA 58.848 36.000 6.60 5.05 0.00 3.07
2677 2893 5.060077 CGTGCTTATGAAAAGAACTTGCATG 59.940 40.000 0.00 0.00 0.00 4.06
2678 2894 5.156355 CGTGCTTATGAAAAGAACTTGCAT 58.844 37.500 0.00 0.00 0.00 3.96
2679 2895 4.036262 ACGTGCTTATGAAAAGAACTTGCA 59.964 37.500 0.00 0.00 0.00 4.08
2680 2896 4.537015 ACGTGCTTATGAAAAGAACTTGC 58.463 39.130 0.00 0.00 0.00 4.01
2681 2897 7.478667 GTCATACGTGCTTATGAAAAGAACTTG 59.521 37.037 0.00 0.00 39.62 3.16
2682 2898 7.387948 AGTCATACGTGCTTATGAAAAGAACTT 59.612 33.333 0.00 0.00 39.62 2.66
2683 2899 6.874134 AGTCATACGTGCTTATGAAAAGAACT 59.126 34.615 0.00 0.00 39.62 3.01
2684 2900 7.061752 AGTCATACGTGCTTATGAAAAGAAC 57.938 36.000 0.00 0.00 39.62 3.01
2685 2901 8.942338 ATAGTCATACGTGCTTATGAAAAGAA 57.058 30.769 0.00 0.00 39.62 2.52
2686 2902 8.942338 AATAGTCATACGTGCTTATGAAAAGA 57.058 30.769 0.00 0.00 39.62 2.52
2687 2903 8.817100 TGAATAGTCATACGTGCTTATGAAAAG 58.183 33.333 0.00 0.00 39.62 2.27
2688 2904 8.600625 GTGAATAGTCATACGTGCTTATGAAAA 58.399 33.333 0.00 0.00 39.62 2.29
2689 2905 7.043656 CGTGAATAGTCATACGTGCTTATGAAA 60.044 37.037 0.00 0.00 39.62 2.69
2690 2906 6.416750 CGTGAATAGTCATACGTGCTTATGAA 59.583 38.462 0.00 0.00 39.62 2.57
2691 2907 5.912955 CGTGAATAGTCATACGTGCTTATGA 59.087 40.000 0.00 0.00 36.34 2.15
2692 2908 5.117135 CCGTGAATAGTCATACGTGCTTATG 59.883 44.000 0.00 0.00 35.80 1.90
2693 2909 5.009310 TCCGTGAATAGTCATACGTGCTTAT 59.991 40.000 0.00 0.00 35.80 1.73
2694 2910 4.336153 TCCGTGAATAGTCATACGTGCTTA 59.664 41.667 0.00 0.00 35.80 3.09
2695 2911 3.129813 TCCGTGAATAGTCATACGTGCTT 59.870 43.478 0.00 0.00 35.80 3.91
2696 2912 2.686405 TCCGTGAATAGTCATACGTGCT 59.314 45.455 0.00 0.00 35.80 4.40
2697 2913 3.074504 TCCGTGAATAGTCATACGTGC 57.925 47.619 0.00 0.00 35.80 5.34
2698 2914 6.203647 TGTATTCCGTGAATAGTCATACGTG 58.796 40.000 0.00 0.00 35.54 4.49
2699 2915 6.381481 TGTATTCCGTGAATAGTCATACGT 57.619 37.500 0.00 0.00 35.54 3.57
2700 2916 6.183359 GCATGTATTCCGTGAATAGTCATACG 60.183 42.308 0.00 0.00 35.54 3.06
2701 2917 6.090898 GGCATGTATTCCGTGAATAGTCATAC 59.909 42.308 0.00 0.00 35.54 2.39
2702 2918 6.014584 AGGCATGTATTCCGTGAATAGTCATA 60.015 38.462 0.00 0.00 35.54 2.15
2703 2919 4.997395 GGCATGTATTCCGTGAATAGTCAT 59.003 41.667 0.00 5.70 35.54 3.06
2704 2920 4.100963 AGGCATGTATTCCGTGAATAGTCA 59.899 41.667 6.59 0.00 35.54 3.41
2705 2921 4.632153 AGGCATGTATTCCGTGAATAGTC 58.368 43.478 6.59 0.00 35.54 2.59
2706 2922 4.689612 AGGCATGTATTCCGTGAATAGT 57.310 40.909 6.59 0.00 35.54 2.12
2707 2923 5.538118 TGTAGGCATGTATTCCGTGAATAG 58.462 41.667 6.59 0.00 35.54 1.73
2708 2924 5.538849 TGTAGGCATGTATTCCGTGAATA 57.461 39.130 0.00 3.18 33.95 1.75
2709 2925 4.415881 TGTAGGCATGTATTCCGTGAAT 57.584 40.909 0.00 4.82 36.20 2.57
2710 2926 3.897141 TGTAGGCATGTATTCCGTGAA 57.103 42.857 0.00 0.00 31.20 3.18
2711 2927 4.415881 AATGTAGGCATGTATTCCGTGA 57.584 40.909 0.00 0.00 35.15 4.35
2712 2928 5.053811 TGTAATGTAGGCATGTATTCCGTG 58.946 41.667 0.00 0.00 35.15 4.94
2713 2929 5.284861 TGTAATGTAGGCATGTATTCCGT 57.715 39.130 0.00 0.00 35.15 4.69
2714 2930 6.426633 TCAATGTAATGTAGGCATGTATTCCG 59.573 38.462 0.00 0.00 35.15 4.30
2715 2931 7.744087 TCAATGTAATGTAGGCATGTATTCC 57.256 36.000 0.00 0.00 35.15 3.01
2716 2932 9.002600 TCATCAATGTAATGTAGGCATGTATTC 57.997 33.333 0.00 0.00 35.15 1.75
2717 2933 8.922931 TCATCAATGTAATGTAGGCATGTATT 57.077 30.769 0.00 0.00 35.15 1.89
2718 2934 8.786898 GTTCATCAATGTAATGTAGGCATGTAT 58.213 33.333 0.00 0.00 35.15 2.29
2719 2935 7.992608 AGTTCATCAATGTAATGTAGGCATGTA 59.007 33.333 0.00 0.00 35.15 2.29
2720 2936 6.830324 AGTTCATCAATGTAATGTAGGCATGT 59.170 34.615 0.00 0.00 35.15 3.21
2721 2937 7.136772 CAGTTCATCAATGTAATGTAGGCATG 58.863 38.462 0.00 0.00 35.15 4.06
2722 2938 6.263842 CCAGTTCATCAATGTAATGTAGGCAT 59.736 38.462 0.00 0.00 36.80 4.40
2723 2939 5.589855 CCAGTTCATCAATGTAATGTAGGCA 59.410 40.000 0.00 0.00 0.00 4.75
2724 2940 5.822519 TCCAGTTCATCAATGTAATGTAGGC 59.177 40.000 0.00 0.00 0.00 3.93
2725 2941 6.017605 GCTCCAGTTCATCAATGTAATGTAGG 60.018 42.308 0.00 0.00 0.00 3.18
2726 2942 6.765036 AGCTCCAGTTCATCAATGTAATGTAG 59.235 38.462 0.00 0.00 0.00 2.74
2727 2943 6.653020 AGCTCCAGTTCATCAATGTAATGTA 58.347 36.000 0.00 0.00 0.00 2.29
2728 2944 5.503927 AGCTCCAGTTCATCAATGTAATGT 58.496 37.500 0.00 0.00 0.00 2.71
2729 2945 6.765036 ACTAGCTCCAGTTCATCAATGTAATG 59.235 38.462 0.00 0.00 0.00 1.90
2730 2946 6.893583 ACTAGCTCCAGTTCATCAATGTAAT 58.106 36.000 0.00 0.00 0.00 1.89
2731 2947 6.299805 ACTAGCTCCAGTTCATCAATGTAA 57.700 37.500 0.00 0.00 0.00 2.41
2732 2948 5.939764 ACTAGCTCCAGTTCATCAATGTA 57.060 39.130 0.00 0.00 0.00 2.29
2733 2949 4.833478 ACTAGCTCCAGTTCATCAATGT 57.167 40.909 0.00 0.00 0.00 2.71
2742 2958 5.540719 GGGTGATATAGAACTAGCTCCAGTT 59.459 44.000 1.40 1.40 41.44 3.16
2743 2959 5.081032 GGGTGATATAGAACTAGCTCCAGT 58.919 45.833 0.00 0.00 0.00 4.00
2744 2960 5.329399 AGGGTGATATAGAACTAGCTCCAG 58.671 45.833 0.00 0.00 0.00 3.86
2745 2961 5.340891 AGGGTGATATAGAACTAGCTCCA 57.659 43.478 0.00 0.00 0.00 3.86
2746 2962 6.893005 ACATAGGGTGATATAGAACTAGCTCC 59.107 42.308 0.00 0.00 0.00 4.70
2747 2963 7.948034 ACATAGGGTGATATAGAACTAGCTC 57.052 40.000 0.00 0.00 0.00 4.09
2748 2964 9.998752 ATAACATAGGGTGATATAGAACTAGCT 57.001 33.333 0.00 0.00 0.00 3.32
2760 2976 9.453572 CATGCAATAGTTATAACATAGGGTGAT 57.546 33.333 17.65 0.00 0.00 3.06
2761 2977 8.655901 TCATGCAATAGTTATAACATAGGGTGA 58.344 33.333 17.65 9.94 0.00 4.02
2762 2978 8.846943 TCATGCAATAGTTATAACATAGGGTG 57.153 34.615 17.65 8.04 0.00 4.61
2763 2979 8.103305 CCTCATGCAATAGTTATAACATAGGGT 58.897 37.037 17.65 0.00 0.00 4.34
2764 2980 8.321353 TCCTCATGCAATAGTTATAACATAGGG 58.679 37.037 17.65 4.52 0.00 3.53
2765 2981 9.725019 TTCCTCATGCAATAGTTATAACATAGG 57.275 33.333 17.65 10.54 0.00 2.57
2768 2984 8.939929 CGATTCCTCATGCAATAGTTATAACAT 58.060 33.333 17.65 6.56 0.00 2.71
2769 2985 7.095229 GCGATTCCTCATGCAATAGTTATAACA 60.095 37.037 17.65 4.52 0.00 2.41
2770 2986 7.095229 TGCGATTCCTCATGCAATAGTTATAAC 60.095 37.037 7.57 7.57 33.80 1.89
2771 2987 6.934083 TGCGATTCCTCATGCAATAGTTATAA 59.066 34.615 0.00 0.00 33.80 0.98
2772 2988 6.463360 TGCGATTCCTCATGCAATAGTTATA 58.537 36.000 0.00 0.00 33.80 0.98
2773 2989 5.308014 TGCGATTCCTCATGCAATAGTTAT 58.692 37.500 0.00 0.00 33.80 1.89
2774 2990 4.702831 TGCGATTCCTCATGCAATAGTTA 58.297 39.130 0.00 0.00 33.80 2.24
2775 2991 3.544684 TGCGATTCCTCATGCAATAGTT 58.455 40.909 0.00 0.00 33.80 2.24
2776 2992 3.198409 TGCGATTCCTCATGCAATAGT 57.802 42.857 0.00 0.00 33.80 2.12
2777 2993 3.126514 GGATGCGATTCCTCATGCAATAG 59.873 47.826 0.00 0.00 41.22 1.73
2778 2994 3.076621 GGATGCGATTCCTCATGCAATA 58.923 45.455 0.00 0.00 41.22 1.90
2779 2995 1.884579 GGATGCGATTCCTCATGCAAT 59.115 47.619 0.00 0.00 41.22 3.56
2780 2996 1.311859 GGATGCGATTCCTCATGCAA 58.688 50.000 0.00 0.00 41.22 4.08
2781 2997 0.881600 CGGATGCGATTCCTCATGCA 60.882 55.000 0.00 0.00 42.22 3.96
2782 2998 1.572085 CCGGATGCGATTCCTCATGC 61.572 60.000 8.71 0.00 33.30 4.06
2783 2999 1.572085 GCCGGATGCGATTCCTCATG 61.572 60.000 8.71 0.00 33.30 3.07
2784 3000 1.302033 GCCGGATGCGATTCCTCAT 60.302 57.895 8.71 0.00 33.30 2.90
2785 3001 2.043604 ATGCCGGATGCGATTCCTCA 62.044 55.000 8.71 0.00 45.60 3.86
2786 3002 0.037326 TATGCCGGATGCGATTCCTC 60.037 55.000 8.71 0.00 45.60 3.71
2787 3003 0.396435 TTATGCCGGATGCGATTCCT 59.604 50.000 8.71 0.00 45.60 3.36
2788 3004 1.453155 ATTATGCCGGATGCGATTCC 58.547 50.000 8.71 0.00 45.60 3.01
2789 3005 4.260784 GGATAATTATGCCGGATGCGATTC 60.261 45.833 8.71 0.00 45.60 2.52
2790 3006 3.627577 GGATAATTATGCCGGATGCGATT 59.372 43.478 8.71 1.67 45.60 3.34
2791 3007 3.206150 GGATAATTATGCCGGATGCGAT 58.794 45.455 8.71 0.00 45.60 4.58
2792 3008 2.027653 TGGATAATTATGCCGGATGCGA 60.028 45.455 8.71 0.00 45.60 5.10
2793 3009 2.355197 TGGATAATTATGCCGGATGCG 58.645 47.619 5.05 0.00 45.60 4.73
2794 3010 3.947196 TGATGGATAATTATGCCGGATGC 59.053 43.478 5.05 0.00 41.77 3.91
2795 3011 4.034394 CGTGATGGATAATTATGCCGGATG 59.966 45.833 5.05 0.59 0.00 3.51
2796 3012 4.191544 CGTGATGGATAATTATGCCGGAT 58.808 43.478 5.05 0.00 0.00 4.18
2797 3013 3.595173 CGTGATGGATAATTATGCCGGA 58.405 45.455 5.05 0.00 0.00 5.14
2798 3014 2.677836 CCGTGATGGATAATTATGCCGG 59.322 50.000 13.70 14.17 42.00 6.13
2799 3015 3.595173 TCCGTGATGGATAATTATGCCG 58.405 45.455 13.70 9.69 43.74 5.69
2811 3027 0.179009 AGGCAATGGATCCGTGATGG 60.179 55.000 17.30 5.37 40.09 3.51
2812 3028 2.146342 GTAGGCAATGGATCCGTGATG 58.854 52.381 17.30 9.88 0.00 3.07
2813 3029 1.270305 CGTAGGCAATGGATCCGTGAT 60.270 52.381 17.30 8.47 0.00 3.06
2814 3030 0.104120 CGTAGGCAATGGATCCGTGA 59.896 55.000 17.30 0.00 0.00 4.35
2815 3031 0.104120 TCGTAGGCAATGGATCCGTG 59.896 55.000 7.39 9.10 0.00 4.94
2816 3032 0.389391 CTCGTAGGCAATGGATCCGT 59.611 55.000 7.39 3.27 0.00 4.69
2817 3033 0.673985 TCTCGTAGGCAATGGATCCG 59.326 55.000 7.39 0.00 0.00 4.18
2818 3034 3.409026 AATCTCGTAGGCAATGGATCC 57.591 47.619 4.20 4.20 0.00 3.36
2819 3035 4.816385 TGAAAATCTCGTAGGCAATGGATC 59.184 41.667 0.00 0.00 0.00 3.36
2820 3036 4.780815 TGAAAATCTCGTAGGCAATGGAT 58.219 39.130 0.00 0.00 0.00 3.41
2821 3037 4.214986 TGAAAATCTCGTAGGCAATGGA 57.785 40.909 0.00 0.00 0.00 3.41
2822 3038 6.808008 ATATGAAAATCTCGTAGGCAATGG 57.192 37.500 0.00 0.00 0.00 3.16
2823 3039 9.764870 CAATATATGAAAATCTCGTAGGCAATG 57.235 33.333 0.00 0.00 0.00 2.82
2824 3040 9.507329 ACAATATATGAAAATCTCGTAGGCAAT 57.493 29.630 0.00 0.00 0.00 3.56
2825 3041 8.902540 ACAATATATGAAAATCTCGTAGGCAA 57.097 30.769 0.00 0.00 0.00 4.52
2826 3042 8.902540 AACAATATATGAAAATCTCGTAGGCA 57.097 30.769 0.00 0.00 0.00 4.75
2827 3043 9.209175 AGAACAATATATGAAAATCTCGTAGGC 57.791 33.333 0.00 0.00 0.00 3.93
2831 3047 8.276325 GCGAAGAACAATATATGAAAATCTCGT 58.724 33.333 0.00 0.00 0.00 4.18
2832 3048 8.491152 AGCGAAGAACAATATATGAAAATCTCG 58.509 33.333 0.00 0.00 0.00 4.04
2846 3062 9.113876 CGAAAAAGTAAATAAGCGAAGAACAAT 57.886 29.630 0.00 0.00 0.00 2.71
2847 3063 8.124199 ACGAAAAAGTAAATAAGCGAAGAACAA 58.876 29.630 0.00 0.00 0.00 2.83
2848 3064 7.632721 ACGAAAAAGTAAATAAGCGAAGAACA 58.367 30.769 0.00 0.00 0.00 3.18
2849 3065 8.407458 CAACGAAAAAGTAAATAAGCGAAGAAC 58.593 33.333 0.00 0.00 0.00 3.01
2850 3066 7.112426 GCAACGAAAAAGTAAATAAGCGAAGAA 59.888 33.333 0.00 0.00 0.00 2.52
2851 3067 6.575942 GCAACGAAAAAGTAAATAAGCGAAGA 59.424 34.615 0.00 0.00 0.00 2.87
2852 3068 6.577427 AGCAACGAAAAAGTAAATAAGCGAAG 59.423 34.615 0.00 0.00 0.00 3.79
2853 3069 6.432107 AGCAACGAAAAAGTAAATAAGCGAA 58.568 32.000 0.00 0.00 0.00 4.70
2854 3070 5.992729 AGCAACGAAAAAGTAAATAAGCGA 58.007 33.333 0.00 0.00 0.00 4.93
2855 3071 7.006210 CAGTAGCAACGAAAAAGTAAATAAGCG 59.994 37.037 0.00 0.00 0.00 4.68
2856 3072 7.801783 ACAGTAGCAACGAAAAAGTAAATAAGC 59.198 33.333 0.00 0.00 0.00 3.09
2857 3073 9.659830 AACAGTAGCAACGAAAAAGTAAATAAG 57.340 29.630 0.00 0.00 0.00 1.73
2860 3076 8.614346 TGTAACAGTAGCAACGAAAAAGTAAAT 58.386 29.630 0.00 0.00 0.00 1.40
2861 3077 7.972527 TGTAACAGTAGCAACGAAAAAGTAAA 58.027 30.769 0.00 0.00 0.00 2.01
2862 3078 7.536895 TGTAACAGTAGCAACGAAAAAGTAA 57.463 32.000 0.00 0.00 0.00 2.24
2863 3079 7.536895 TTGTAACAGTAGCAACGAAAAAGTA 57.463 32.000 0.00 0.00 0.00 2.24
2864 3080 6.425577 TTGTAACAGTAGCAACGAAAAAGT 57.574 33.333 0.00 0.00 0.00 2.66
2865 3081 7.908193 AATTGTAACAGTAGCAACGAAAAAG 57.092 32.000 0.00 0.00 0.00 2.27
2866 3082 8.614346 AGTAATTGTAACAGTAGCAACGAAAAA 58.386 29.630 0.00 0.00 0.00 1.94
2867 3083 8.145316 AGTAATTGTAACAGTAGCAACGAAAA 57.855 30.769 0.00 0.00 0.00 2.29
2868 3084 7.718272 AGTAATTGTAACAGTAGCAACGAAA 57.282 32.000 0.00 0.00 0.00 3.46
2869 3085 8.991243 ATAGTAATTGTAACAGTAGCAACGAA 57.009 30.769 0.00 0.00 0.00 3.85
2898 3114 9.541143 CAACAGTAAAGATAAATGTTTTGGGTT 57.459 29.630 0.00 0.00 32.01 4.11
2899 3115 7.655732 GCAACAGTAAAGATAAATGTTTTGGGT 59.344 33.333 0.00 0.00 32.01 4.51
2900 3116 7.872483 AGCAACAGTAAAGATAAATGTTTTGGG 59.128 33.333 0.00 0.00 32.01 4.12
2901 3117 8.816640 AGCAACAGTAAAGATAAATGTTTTGG 57.183 30.769 0.00 0.00 32.01 3.28
2905 3121 9.284968 ACAGTAGCAACAGTAAAGATAAATGTT 57.715 29.630 0.00 0.00 34.56 2.71
2906 3122 8.848474 ACAGTAGCAACAGTAAAGATAAATGT 57.152 30.769 0.00 0.00 0.00 2.71
2909 3125 9.211485 GGTAACAGTAGCAACAGTAAAGATAAA 57.789 33.333 0.00 0.00 0.00 1.40
2910 3126 8.369424 TGGTAACAGTAGCAACAGTAAAGATAA 58.631 33.333 0.00 0.00 46.17 1.75
2911 3127 7.898918 TGGTAACAGTAGCAACAGTAAAGATA 58.101 34.615 0.00 0.00 46.17 1.98
2912 3128 6.765403 TGGTAACAGTAGCAACAGTAAAGAT 58.235 36.000 0.00 0.00 46.17 2.40
2913 3129 6.164417 TGGTAACAGTAGCAACAGTAAAGA 57.836 37.500 0.00 0.00 46.17 2.52
2949 3165 9.543018 GCAGCAAAGTATTTAGTAGTAAAAGTG 57.457 33.333 6.84 3.19 35.03 3.16
2950 3166 9.280174 TGCAGCAAAGTATTTAGTAGTAAAAGT 57.720 29.630 6.84 0.00 35.03 2.66
2951 3167 9.760660 CTGCAGCAAAGTATTTAGTAGTAAAAG 57.239 33.333 0.00 0.00 35.03 2.27
2952 3168 9.496873 TCTGCAGCAAAGTATTTAGTAGTAAAA 57.503 29.630 9.47 0.00 35.03 1.52
2953 3169 9.667107 ATCTGCAGCAAAGTATTTAGTAGTAAA 57.333 29.630 9.47 5.24 35.03 2.01
2955 3171 9.745880 GTATCTGCAGCAAAGTATTTAGTAGTA 57.254 33.333 9.47 0.00 35.03 1.82
2956 3172 8.478877 AGTATCTGCAGCAAAGTATTTAGTAGT 58.521 33.333 9.47 0.00 35.03 2.73
2957 3173 8.879342 AGTATCTGCAGCAAAGTATTTAGTAG 57.121 34.615 9.47 0.00 35.03 2.57
2959 3175 9.319143 CTTAGTATCTGCAGCAAAGTATTTAGT 57.681 33.333 9.47 0.00 35.03 2.24
2960 3176 9.319143 ACTTAGTATCTGCAGCAAAGTATTTAG 57.681 33.333 9.47 1.96 35.03 1.85
2961 3177 9.667107 AACTTAGTATCTGCAGCAAAGTATTTA 57.333 29.630 9.47 0.00 35.03 1.40
2962 3178 8.567285 AACTTAGTATCTGCAGCAAAGTATTT 57.433 30.769 9.47 0.00 40.26 1.40
2963 3179 9.838339 ATAACTTAGTATCTGCAGCAAAGTATT 57.162 29.630 9.47 0.00 0.00 1.89
2964 3180 9.482627 GATAACTTAGTATCTGCAGCAAAGTAT 57.517 33.333 9.47 0.00 0.00 2.12
2965 3181 7.926555 GGATAACTTAGTATCTGCAGCAAAGTA 59.073 37.037 9.47 1.12 32.09 2.24
2966 3182 6.763610 GGATAACTTAGTATCTGCAGCAAAGT 59.236 38.462 9.47 10.46 32.09 2.66
2967 3183 6.763135 TGGATAACTTAGTATCTGCAGCAAAG 59.237 38.462 9.47 9.85 32.09 2.77
2968 3184 6.649155 TGGATAACTTAGTATCTGCAGCAAA 58.351 36.000 9.47 0.00 32.09 3.68
2969 3185 6.233905 TGGATAACTTAGTATCTGCAGCAA 57.766 37.500 9.47 0.00 32.09 3.91
2970 3186 5.221521 CCTGGATAACTTAGTATCTGCAGCA 60.222 44.000 9.47 0.00 32.09 4.41
2971 3187 5.221541 ACCTGGATAACTTAGTATCTGCAGC 60.222 44.000 9.47 0.00 32.09 5.25
2972 3188 6.183360 ACACCTGGATAACTTAGTATCTGCAG 60.183 42.308 7.63 7.63 32.09 4.41
2973 3189 5.661312 ACACCTGGATAACTTAGTATCTGCA 59.339 40.000 0.00 0.00 32.09 4.41
2974 3190 5.986135 CACACCTGGATAACTTAGTATCTGC 59.014 44.000 0.00 0.00 32.09 4.26
2975 3191 6.098409 ACCACACCTGGATAACTTAGTATCTG 59.902 42.308 0.00 0.00 40.55 2.90
2976 3192 6.098409 CACCACACCTGGATAACTTAGTATCT 59.902 42.308 0.00 0.00 40.55 1.98
2977 3193 6.281405 CACCACACCTGGATAACTTAGTATC 58.719 44.000 0.00 0.00 40.55 2.24
2978 3194 5.130477 CCACCACACCTGGATAACTTAGTAT 59.870 44.000 0.00 0.00 40.55 2.12
2979 3195 4.468510 CCACCACACCTGGATAACTTAGTA 59.531 45.833 0.00 0.00 40.55 1.82
2980 3196 3.263425 CCACCACACCTGGATAACTTAGT 59.737 47.826 0.00 0.00 40.55 2.24
2981 3197 3.517901 TCCACCACACCTGGATAACTTAG 59.482 47.826 0.00 0.00 40.55 2.18
2982 3198 3.522759 TCCACCACACCTGGATAACTTA 58.477 45.455 0.00 0.00 40.55 2.24
2983 3199 2.344592 TCCACCACACCTGGATAACTT 58.655 47.619 0.00 0.00 40.55 2.66
2984 3200 2.038863 TCCACCACACCTGGATAACT 57.961 50.000 0.00 0.00 40.55 2.24
2985 3201 2.871096 TTCCACCACACCTGGATAAC 57.129 50.000 0.00 0.00 40.55 1.89
2986 3202 3.332187 TCAATTCCACCACACCTGGATAA 59.668 43.478 0.00 0.00 40.55 1.75
2987 3203 2.916269 TCAATTCCACCACACCTGGATA 59.084 45.455 0.00 0.00 40.55 2.59
2988 3204 1.710244 TCAATTCCACCACACCTGGAT 59.290 47.619 0.00 0.00 40.55 3.41
2989 3205 1.144691 TCAATTCCACCACACCTGGA 58.855 50.000 0.00 0.00 40.55 3.86
2990 3206 1.247567 GTCAATTCCACCACACCTGG 58.752 55.000 0.00 0.00 44.26 4.45
2991 3207 1.979855 TGTCAATTCCACCACACCTG 58.020 50.000 0.00 0.00 0.00 4.00
2992 3208 2.091885 AGTTGTCAATTCCACCACACCT 60.092 45.455 0.00 0.00 0.00 4.00
2993 3209 2.293399 GAGTTGTCAATTCCACCACACC 59.707 50.000 0.00 0.00 0.00 4.16
2994 3210 2.948979 TGAGTTGTCAATTCCACCACAC 59.051 45.455 5.70 0.00 0.00 3.82
2995 3211 3.289407 TGAGTTGTCAATTCCACCACA 57.711 42.857 5.70 0.00 0.00 4.17
2996 3212 3.632145 AGTTGAGTTGTCAATTCCACCAC 59.368 43.478 8.22 0.72 44.58 4.16
2997 3213 3.631686 CAGTTGAGTTGTCAATTCCACCA 59.368 43.478 8.22 0.00 44.58 4.17
2998 3214 3.550842 GCAGTTGAGTTGTCAATTCCACC 60.551 47.826 8.22 0.00 44.58 4.61
2999 3215 3.316308 AGCAGTTGAGTTGTCAATTCCAC 59.684 43.478 5.70 5.13 44.58 4.02
3000 3216 3.554934 AGCAGTTGAGTTGTCAATTCCA 58.445 40.909 5.70 0.00 44.58 3.53
3001 3217 5.008613 TGTTAGCAGTTGAGTTGTCAATTCC 59.991 40.000 5.70 0.00 44.58 3.01
3002 3218 5.909610 GTGTTAGCAGTTGAGTTGTCAATTC 59.090 40.000 1.25 1.25 44.58 2.17
3003 3219 5.590259 AGTGTTAGCAGTTGAGTTGTCAATT 59.410 36.000 0.00 0.00 44.58 2.32
3004 3220 5.126067 AGTGTTAGCAGTTGAGTTGTCAAT 58.874 37.500 0.00 0.00 44.58 2.57
3005 3221 4.513442 AGTGTTAGCAGTTGAGTTGTCAA 58.487 39.130 0.00 0.00 40.55 3.18
3006 3222 4.119862 GAGTGTTAGCAGTTGAGTTGTCA 58.880 43.478 0.00 0.00 0.00 3.58
3007 3223 4.119862 TGAGTGTTAGCAGTTGAGTTGTC 58.880 43.478 0.00 0.00 0.00 3.18
3008 3224 4.137116 TGAGTGTTAGCAGTTGAGTTGT 57.863 40.909 0.00 0.00 0.00 3.32
3009 3225 4.811024 TCTTGAGTGTTAGCAGTTGAGTTG 59.189 41.667 0.00 0.00 0.00 3.16
3010 3226 5.023533 TCTTGAGTGTTAGCAGTTGAGTT 57.976 39.130 0.00 0.00 0.00 3.01
3011 3227 4.672587 TCTTGAGTGTTAGCAGTTGAGT 57.327 40.909 0.00 0.00 0.00 3.41
3012 3228 7.840342 ATATTCTTGAGTGTTAGCAGTTGAG 57.160 36.000 0.00 0.00 0.00 3.02
3013 3229 8.097038 AGAATATTCTTGAGTGTTAGCAGTTGA 58.903 33.333 12.37 0.00 32.55 3.18
3014 3230 8.261492 AGAATATTCTTGAGTGTTAGCAGTTG 57.739 34.615 12.37 0.00 32.55 3.16
3015 3231 8.854614 AAGAATATTCTTGAGTGTTAGCAGTT 57.145 30.769 26.26 0.16 45.27 3.16
3016 3232 8.725148 CAAAGAATATTCTTGAGTGTTAGCAGT 58.275 33.333 27.25 7.71 46.22 4.40
3017 3233 8.180267 CCAAAGAATATTCTTGAGTGTTAGCAG 58.820 37.037 27.25 8.06 46.22 4.24
3018 3234 7.362056 GCCAAAGAATATTCTTGAGTGTTAGCA 60.362 37.037 27.25 0.00 46.22 3.49
3019 3235 6.969473 GCCAAAGAATATTCTTGAGTGTTAGC 59.031 38.462 27.25 17.19 46.22 3.09
3020 3236 8.273780 AGCCAAAGAATATTCTTGAGTGTTAG 57.726 34.615 27.25 12.68 46.22 2.34
3021 3237 7.336931 GGAGCCAAAGAATATTCTTGAGTGTTA 59.663 37.037 27.25 0.00 46.22 2.41
3022 3238 6.151817 GGAGCCAAAGAATATTCTTGAGTGTT 59.848 38.462 27.25 15.33 46.22 3.32
3023 3239 5.649831 GGAGCCAAAGAATATTCTTGAGTGT 59.350 40.000 27.25 11.64 46.22 3.55
3024 3240 5.067023 GGGAGCCAAAGAATATTCTTGAGTG 59.933 44.000 27.25 21.31 46.22 3.51
3025 3241 5.196695 GGGAGCCAAAGAATATTCTTGAGT 58.803 41.667 27.25 12.32 46.22 3.41
3026 3242 4.582240 GGGGAGCCAAAGAATATTCTTGAG 59.418 45.833 27.25 21.80 46.22 3.02
3027 3243 4.230502 AGGGGAGCCAAAGAATATTCTTGA 59.769 41.667 27.25 0.00 46.22 3.02
3028 3244 4.540715 AGGGGAGCCAAAGAATATTCTTG 58.459 43.478 27.25 20.35 46.22 3.02
3030 3246 4.017130 ACAAGGGGAGCCAAAGAATATTCT 60.017 41.667 12.37 12.37 39.74 2.40
3031 3247 4.098501 CACAAGGGGAGCCAAAGAATATTC 59.901 45.833 7.41 7.41 0.00 1.75
3032 3248 4.026052 CACAAGGGGAGCCAAAGAATATT 58.974 43.478 0.00 0.00 0.00 1.28
3033 3249 3.011708 ACACAAGGGGAGCCAAAGAATAT 59.988 43.478 0.00 0.00 0.00 1.28
3034 3250 2.378547 ACACAAGGGGAGCCAAAGAATA 59.621 45.455 0.00 0.00 0.00 1.75
3035 3251 1.147817 ACACAAGGGGAGCCAAAGAAT 59.852 47.619 0.00 0.00 0.00 2.40
3036 3252 0.555769 ACACAAGGGGAGCCAAAGAA 59.444 50.000 0.00 0.00 0.00 2.52
3037 3253 0.555769 AACACAAGGGGAGCCAAAGA 59.444 50.000 0.00 0.00 0.00 2.52
3038 3254 0.675633 CAACACAAGGGGAGCCAAAG 59.324 55.000 0.00 0.00 0.00 2.77
3039 3255 0.260230 TCAACACAAGGGGAGCCAAA 59.740 50.000 0.00 0.00 0.00 3.28
3040 3256 0.260230 TTCAACACAAGGGGAGCCAA 59.740 50.000 0.00 0.00 0.00 4.52
3041 3257 0.482446 ATTCAACACAAGGGGAGCCA 59.518 50.000 0.00 0.00 0.00 4.75
3042 3258 1.177401 GATTCAACACAAGGGGAGCC 58.823 55.000 0.00 0.00 0.00 4.70
3043 3259 1.909700 TGATTCAACACAAGGGGAGC 58.090 50.000 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.