Multiple sequence alignment - TraesCS4B01G300600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G300600 chr4B 100.000 1620 0 0 3528 5147 586932867 586934486 0.000000e+00 2992.0
1 TraesCS4B01G300600 chr4B 100.000 1552 0 0 1789 3340 586931128 586932679 0.000000e+00 2867.0
2 TraesCS4B01G300600 chr4B 100.000 1494 0 0 1 1494 586929340 586930833 0.000000e+00 2760.0
3 TraesCS4B01G300600 chr4B 100.000 1475 0 0 5501 6975 586934840 586936314 0.000000e+00 2724.0
4 TraesCS4B01G300600 chr4B 94.297 982 18 11 4154 5108 587161966 587162936 0.000000e+00 1469.0
5 TraesCS4B01G300600 chr4B 85.882 680 82 10 2373 3049 587160163 587160831 0.000000e+00 712.0
6 TraesCS4B01G300600 chr4B 89.824 511 30 10 5554 6064 587162940 587163428 2.740000e-178 636.0
7 TraesCS4B01G300600 chr4B 88.462 390 31 6 1789 2165 587159622 587160010 6.380000e-125 459.0
8 TraesCS4B01G300600 chr4B 94.737 57 2 1 2321 2377 587160021 587160076 3.470000e-13 87.9
9 TraesCS4B01G300600 chr4D 93.503 1647 54 20 3536 5147 468420388 468422016 0.000000e+00 2399.0
10 TraesCS4B01G300600 chr4D 93.488 1290 60 9 1789 3068 468418698 468419973 0.000000e+00 1895.0
11 TraesCS4B01G300600 chr4D 91.407 1187 74 17 312 1492 468417447 468418611 0.000000e+00 1602.0
12 TraesCS4B01G300600 chr4D 94.526 548 17 5 5605 6139 468422071 468422618 0.000000e+00 833.0
13 TraesCS4B01G300600 chr4D 98.561 139 2 0 3182 3320 468419972 468420110 5.400000e-61 246.0
14 TraesCS4B01G300600 chr4D 96.581 117 4 0 3067 3183 72256246 72256130 1.990000e-45 195.0
15 TraesCS4B01G300600 chr4D 94.400 125 6 1 3062 3186 428946375 428946498 2.570000e-44 191.0
16 TraesCS4B01G300600 chr4D 88.125 160 14 5 164 319 468415871 468416029 1.190000e-42 185.0
17 TraesCS4B01G300600 chr4D 92.857 98 7 0 67 164 494042372 494042469 7.290000e-30 143.0
18 TraesCS4B01G300600 chr4D 90.654 107 9 1 59 165 12354691 12354796 2.620000e-29 141.0
19 TraesCS4B01G300600 chr4D 89.286 56 5 1 12 67 468415815 468415869 1.260000e-07 69.4
20 TraesCS4B01G300600 chr4A 92.169 1558 68 31 3528 5053 3065079 3063544 0.000000e+00 2152.0
21 TraesCS4B01G300600 chr4A 89.943 706 59 10 2366 3068 3065935 3065239 0.000000e+00 900.0
22 TraesCS4B01G300600 chr4A 92.199 564 26 7 5505 6064 3063283 3062734 0.000000e+00 782.0
23 TraesCS4B01G300600 chr4A 87.270 652 50 18 308 948 3067593 3066964 0.000000e+00 713.0
24 TraesCS4B01G300600 chr4A 91.984 499 28 6 973 1466 3066975 3066484 0.000000e+00 689.0
25 TraesCS4B01G300600 chr4A 91.443 409 30 3 1792 2195 3066362 3065954 2.200000e-154 556.0
26 TraesCS4B01G300600 chr4A 96.855 159 5 0 3182 3340 3065240 3065082 4.150000e-67 267.0
27 TraesCS4B01G300600 chr4A 87.156 109 9 4 162 268 3067930 3067825 1.230000e-22 119.0
28 TraesCS4B01G300600 chr4A 97.959 49 1 0 162 210 3069099 3069051 1.250000e-12 86.1
29 TraesCS4B01G300600 chr4A 89.394 66 6 1 4 69 3069161 3069097 1.610000e-11 82.4
30 TraesCS4B01G300600 chr5B 96.875 640 19 1 6337 6975 711887659 711888298 0.000000e+00 1070.0
31 TraesCS4B01G300600 chr5B 96.401 639 22 1 6337 6974 559539075 559538437 0.000000e+00 1051.0
32 TraesCS4B01G300600 chr3B 95.938 640 25 1 6337 6975 825553588 825552949 0.000000e+00 1037.0
33 TraesCS4B01G300600 chr3B 97.647 170 4 0 6137 6306 18858960 18858791 6.840000e-75 292.0
34 TraesCS4B01G300600 chr3B 98.204 167 3 0 6141 6307 703118703 703118537 6.840000e-75 292.0
35 TraesCS4B01G300600 chr3B 95.506 178 6 2 6131 6307 810265574 810265398 4.120000e-72 283.0
36 TraesCS4B01G300600 chr2A 95.156 640 28 3 6337 6975 689633882 689633245 0.000000e+00 1007.0
37 TraesCS4B01G300600 chr2A 85.625 640 91 1 6337 6975 768948967 768948328 0.000000e+00 671.0
38 TraesCS4B01G300600 chr6A 86.909 634 81 2 6343 6975 573614255 573613623 0.000000e+00 710.0
39 TraesCS4B01G300600 chr6A 86.508 126 13 4 48 170 596589464 596589340 1.220000e-27 135.0
40 TraesCS4B01G300600 chr1D 87.500 616 75 2 6337 6951 374412303 374411689 0.000000e+00 710.0
41 TraesCS4B01G300600 chr1D 96.639 119 4 0 3067 3185 284915946 284915828 1.530000e-46 198.0
42 TraesCS4B01G300600 chr1D 94.898 98 5 0 66 163 220408837 220408740 3.370000e-33 154.0
43 TraesCS4B01G300600 chr7B 85.312 640 93 1 6337 6975 483349663 483350302 0.000000e+00 660.0
44 TraesCS4B01G300600 chr7B 97.458 118 3 0 3067 3184 462842117 462842234 1.190000e-47 202.0
45 TraesCS4B01G300600 chr5D 83.570 633 103 1 6343 6975 542543623 542542992 6.020000e-165 592.0
46 TraesCS4B01G300600 chr5D 90.741 108 10 0 65 172 228446960 228447067 2.030000e-30 145.0
47 TraesCS4B01G300600 chr6B 97.110 173 5 0 6131 6303 48412248 48412076 6.840000e-75 292.0
48 TraesCS4B01G300600 chr6B 95.349 129 4 1 3067 3195 343032851 343032977 3.300000e-48 204.0
49 TraesCS4B01G300600 chr6B 100.000 28 0 0 3038 3065 620872544 620872517 1.300000e-02 52.8
50 TraesCS4B01G300600 chr1A 97.110 173 4 1 6141 6313 538681749 538681920 2.460000e-74 291.0
51 TraesCS4B01G300600 chr7A 98.182 165 3 0 6141 6305 486649338 486649174 8.850000e-74 289.0
52 TraesCS4B01G300600 chr7A 97.076 171 4 1 6138 6307 61776823 61776993 3.180000e-73 287.0
53 TraesCS4B01G300600 chr1B 96.552 174 4 1 6131 6304 520523922 520523751 3.180000e-73 287.0
54 TraesCS4B01G300600 chr1B 93.750 128 7 1 3056 3183 630918431 630918557 2.570000e-44 191.0
55 TraesCS4B01G300600 chr1B 93.023 129 8 1 3058 3185 613246055 613245927 3.320000e-43 187.0
56 TraesCS4B01G300600 chr1B 91.509 106 9 0 65 170 301264581 301264476 5.640000e-31 147.0
57 TraesCS4B01G300600 chr5A 97.590 166 4 0 6138 6303 394156744 394156909 1.150000e-72 285.0
58 TraesCS4B01G300600 chr5A 88.430 121 11 2 46 165 320214583 320214701 7.290000e-30 143.0
59 TraesCS4B01G300600 chr3D 96.610 118 4 0 3067 3184 498226243 498226126 5.520000e-46 196.0
60 TraesCS4B01G300600 chr2D 93.023 129 7 2 3067 3195 381869740 381869614 3.320000e-43 187.0
61 TraesCS4B01G300600 chr2D 87.603 121 13 2 51 170 27500985 27501104 9.430000e-29 139.0
62 TraesCS4B01G300600 chr2B 88.983 118 9 2 61 176 768661133 768661018 7.290000e-30 143.0
63 TraesCS4B01G300600 chr7D 77.895 190 42 0 5651 5840 413692761 413692950 1.230000e-22 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G300600 chr4B 586929340 586936314 6974 False 2835.750000 2992 100.000000 1 6975 4 chr4B.!!$F1 6974
1 TraesCS4B01G300600 chr4B 587159622 587163428 3806 False 672.780000 1469 90.640400 1789 6064 5 chr4B.!!$F2 4275
2 TraesCS4B01G300600 chr4D 468415815 468422618 6803 False 1032.771429 2399 92.699429 12 6139 7 chr4D.!!$F4 6127
3 TraesCS4B01G300600 chr4A 3062734 3069161 6427 True 634.650000 2152 91.637200 4 6064 10 chr4A.!!$R1 6060
4 TraesCS4B01G300600 chr5B 711887659 711888298 639 False 1070.000000 1070 96.875000 6337 6975 1 chr5B.!!$F1 638
5 TraesCS4B01G300600 chr5B 559538437 559539075 638 True 1051.000000 1051 96.401000 6337 6974 1 chr5B.!!$R1 637
6 TraesCS4B01G300600 chr3B 825552949 825553588 639 True 1037.000000 1037 95.938000 6337 6975 1 chr3B.!!$R4 638
7 TraesCS4B01G300600 chr2A 689633245 689633882 637 True 1007.000000 1007 95.156000 6337 6975 1 chr2A.!!$R1 638
8 TraesCS4B01G300600 chr2A 768948328 768948967 639 True 671.000000 671 85.625000 6337 6975 1 chr2A.!!$R2 638
9 TraesCS4B01G300600 chr6A 573613623 573614255 632 True 710.000000 710 86.909000 6343 6975 1 chr6A.!!$R1 632
10 TraesCS4B01G300600 chr1D 374411689 374412303 614 True 710.000000 710 87.500000 6337 6951 1 chr1D.!!$R3 614
11 TraesCS4B01G300600 chr7B 483349663 483350302 639 False 660.000000 660 85.312000 6337 6975 1 chr7B.!!$F2 638
12 TraesCS4B01G300600 chr5D 542542992 542543623 631 True 592.000000 592 83.570000 6343 6975 1 chr5D.!!$R1 632

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
941 3746 0.035056 ATCTTCTCCAACCCTTGCCG 60.035 55.0 0.00 0.00 0.00 5.69 F
1329 4140 0.036022 GCAACTGTGAGAGCCCTTCT 59.964 55.0 0.00 0.00 39.43 2.85 F
3085 6036 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.0 5.23 0.00 44.66 2.17 F
3088 6039 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.00 44.66 2.12 F
3185 6136 0.032813 TCCGGACGGAGGGAGTATTT 60.033 55.0 9.76 0.00 39.76 1.40 F
3648 6796 0.385751 ACATAGCCGTCATCTCCGTG 59.614 55.0 0.00 0.00 0.00 4.94 F
5026 8283 0.179100 AGCATCTGGACGACCGATTG 60.179 55.0 8.07 2.94 39.42 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2297 5136 0.108992 GCTGTCGTGTGATTCCGGTA 60.109 55.000 0.00 0.0 0.00 4.02 R
3160 6111 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 R
4220 7417 1.380112 GGAGACGACTAGGCTGGGT 60.380 63.158 2.02 0.0 39.26 4.51 R
4322 7524 3.391296 TCCCTAATATTGACAGTGAGGGC 59.609 47.826 11.09 0.0 41.73 5.19 R
4539 7753 3.754323 CGGTTGTTACAAGAAGGGCATAA 59.246 43.478 0.00 0.0 0.00 1.90 R
5557 8818 0.909610 ACCGAATCAGCTGGAGGGAA 60.910 55.000 15.13 0.0 0.00 3.97 R
6325 9605 0.307760 GCCAGTTGGTTGAACAGTCG 59.692 55.000 0.00 0.0 36.98 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 9.847224 TTTTCAATTATTATACTCCCTCAGTCC 57.153 33.333 0.00 0.00 36.43 3.85
80 81 8.798975 TTCAATTATTATACTCCCTCAGTCCT 57.201 34.615 0.00 0.00 36.43 3.85
81 82 9.892444 TTCAATTATTATACTCCCTCAGTCCTA 57.108 33.333 0.00 0.00 36.43 2.94
82 83 9.892444 TCAATTATTATACTCCCTCAGTCCTAA 57.108 33.333 0.00 0.00 36.43 2.69
91 92 7.272144 ACTCCCTCAGTCCTAAAATAAATGT 57.728 36.000 0.00 0.00 0.00 2.71
92 93 7.339482 ACTCCCTCAGTCCTAAAATAAATGTC 58.661 38.462 0.00 0.00 0.00 3.06
93 94 7.182930 ACTCCCTCAGTCCTAAAATAAATGTCT 59.817 37.037 0.00 0.00 0.00 3.41
94 95 7.565680 TCCCTCAGTCCTAAAATAAATGTCTC 58.434 38.462 0.00 0.00 0.00 3.36
95 96 7.182026 TCCCTCAGTCCTAAAATAAATGTCTCA 59.818 37.037 0.00 0.00 0.00 3.27
96 97 7.829211 CCCTCAGTCCTAAAATAAATGTCTCAA 59.171 37.037 0.00 0.00 0.00 3.02
97 98 8.669243 CCTCAGTCCTAAAATAAATGTCTCAAC 58.331 37.037 0.00 0.00 0.00 3.18
98 99 8.561738 TCAGTCCTAAAATAAATGTCTCAACC 57.438 34.615 0.00 0.00 0.00 3.77
99 100 8.383175 TCAGTCCTAAAATAAATGTCTCAACCT 58.617 33.333 0.00 0.00 0.00 3.50
100 101 9.014297 CAGTCCTAAAATAAATGTCTCAACCTT 57.986 33.333 0.00 0.00 0.00 3.50
111 112 8.747538 AAATGTCTCAACCTTAGTACAACTTT 57.252 30.769 0.00 0.00 0.00 2.66
112 113 7.730364 ATGTCTCAACCTTAGTACAACTTTG 57.270 36.000 0.00 0.00 0.00 2.77
113 114 6.646267 TGTCTCAACCTTAGTACAACTTTGT 58.354 36.000 0.00 0.00 44.86 2.83
114 115 7.784037 TGTCTCAACCTTAGTACAACTTTGTA 58.216 34.615 0.00 0.00 42.35 2.41
154 155 6.753107 ATTAAGACACTTATTTTGGGACGG 57.247 37.500 0.00 0.00 0.00 4.79
155 156 4.360951 AAGACACTTATTTTGGGACGGA 57.639 40.909 0.00 0.00 0.00 4.69
156 157 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
157 158 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
158 159 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
159 160 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
160 161 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
161 162 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
162 163 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
278 1455 1.774856 GGCCCTAAATTCCTAGAGGCA 59.225 52.381 13.90 0.00 37.15 4.75
294 1471 4.465512 CAGCATTGCGTCGCCCAC 62.466 66.667 15.88 1.47 0.00 4.61
302 1479 2.738521 CGTCGCCCACAGGACAAG 60.739 66.667 0.00 0.00 33.47 3.16
383 3178 1.300697 GAACCAGTCGTGCCGTTCT 60.301 57.895 0.00 0.00 33.42 3.01
443 3238 5.193099 ACAAATGGTTGCCCTTATAGTCT 57.807 39.130 0.00 0.00 38.39 3.24
449 3244 1.879575 TGCCCTTATAGTCTGCACCT 58.120 50.000 0.00 0.00 0.00 4.00
487 3282 2.086054 ACATTTCAGGAGCGACAGTC 57.914 50.000 0.00 0.00 0.00 3.51
505 3300 7.255569 CGACAGTCAAATACTATGAACCACTA 58.744 38.462 0.41 0.00 35.76 2.74
520 3318 7.504924 TGAACCACTAACAATTTTACCTCTG 57.495 36.000 0.00 0.00 0.00 3.35
521 3319 6.488683 TGAACCACTAACAATTTTACCTCTGG 59.511 38.462 0.00 0.00 0.00 3.86
536 3334 3.203487 ACCTCTGGGTAAACAAAGAACCA 59.797 43.478 0.00 0.00 45.32 3.67
549 3347 0.978146 AGAACCACCCATCTCCGGAG 60.978 60.000 26.32 26.32 0.00 4.63
550 3348 1.229529 AACCACCCATCTCCGGAGT 60.230 57.895 30.17 15.41 0.00 3.85
551 3349 0.042131 AACCACCCATCTCCGGAGTA 59.958 55.000 30.17 17.58 0.00 2.59
552 3350 0.042131 ACCACCCATCTCCGGAGTAA 59.958 55.000 30.17 13.58 0.00 2.24
611 3409 4.762251 AGCCAGACAGTCCAATAGAAAAAC 59.238 41.667 0.00 0.00 0.00 2.43
623 3421 8.749354 GTCCAATAGAAAAACAACATATCCCTT 58.251 33.333 0.00 0.00 0.00 3.95
624 3422 8.748412 TCCAATAGAAAAACAACATATCCCTTG 58.252 33.333 0.00 0.00 0.00 3.61
669 3467 1.381599 TTGGCCCATCATCCAAGCC 60.382 57.895 0.00 0.00 44.13 4.35
673 3471 1.454479 CCCATCATCCAAGCCGCTT 60.454 57.895 0.00 0.00 0.00 4.68
675 3473 1.450531 CCATCATCCAAGCCGCTTCC 61.451 60.000 1.56 0.00 0.00 3.46
678 3476 4.489771 ATCCAAGCCGCTTCCCCG 62.490 66.667 1.56 0.00 0.00 5.73
781 3579 2.895242 AGACGTGGTAAGACTACCCT 57.105 50.000 0.00 0.00 46.39 4.34
782 3580 2.444421 AGACGTGGTAAGACTACCCTG 58.556 52.381 0.00 0.00 46.39 4.45
783 3581 1.475682 GACGTGGTAAGACTACCCTGG 59.524 57.143 0.00 0.00 46.39 4.45
785 3583 1.272807 GTGGTAAGACTACCCTGGCA 58.727 55.000 0.00 0.00 46.39 4.92
786 3584 1.066358 GTGGTAAGACTACCCTGGCAC 60.066 57.143 0.00 0.00 46.39 5.01
787 3585 0.540454 GGTAAGACTACCCTGGCACC 59.460 60.000 0.00 0.00 41.77 5.01
790 3588 0.550147 AAGACTACCCTGGCACCCAT 60.550 55.000 0.00 0.00 30.82 4.00
791 3589 0.550147 AGACTACCCTGGCACCCATT 60.550 55.000 0.00 0.00 30.82 3.16
865 3667 0.165944 CAAAGGGACACGCATCGTTC 59.834 55.000 0.00 0.00 38.32 3.95
866 3668 0.953960 AAAGGGACACGCATCGTTCC 60.954 55.000 10.11 10.11 38.32 3.62
882 3684 3.516300 TCGTTCCTGGGTCTATTTAAGCA 59.484 43.478 0.00 0.00 0.00 3.91
941 3746 0.035056 ATCTTCTCCAACCCTTGCCG 60.035 55.000 0.00 0.00 0.00 5.69
1138 3944 3.118956 GGTACAGTGCTATGTCTTGCTCT 60.119 47.826 0.00 0.00 34.56 4.09
1139 3945 3.244033 ACAGTGCTATGTCTTGCTCTC 57.756 47.619 0.00 0.00 31.76 3.20
1144 3950 1.939255 GCTATGTCTTGCTCTCCTTGC 59.061 52.381 0.00 0.00 0.00 4.01
1145 3951 2.679059 GCTATGTCTTGCTCTCCTTGCA 60.679 50.000 0.00 0.00 38.80 4.08
1153 3959 4.162131 TCTTGCTCTCCTTGCACATATGTA 59.838 41.667 8.32 0.00 40.40 2.29
1182 3988 1.199789 TCGTTTGCTCATGTTCATGGC 59.800 47.619 12.02 13.49 0.00 4.40
1227 4038 7.328737 AGAGATCGGTTAATTTACGATATGTGC 59.671 37.037 9.80 1.14 46.12 4.57
1302 4113 0.982852 TGGTGTCCCTGGCCTATCTG 60.983 60.000 3.32 0.00 0.00 2.90
1308 4119 1.204113 CCCTGGCCTATCTGGATCCC 61.204 65.000 9.90 0.00 38.35 3.85
1318 4129 1.746615 CTGGATCCCGGCAACTGTG 60.747 63.158 9.90 0.00 0.00 3.66
1321 4132 1.596934 GATCCCGGCAACTGTGAGA 59.403 57.895 0.00 0.00 0.00 3.27
1328 4139 0.957888 GGCAACTGTGAGAGCCCTTC 60.958 60.000 0.00 0.00 41.25 3.46
1329 4140 0.036022 GCAACTGTGAGAGCCCTTCT 59.964 55.000 0.00 0.00 39.43 2.85
1352 4163 3.005155 CCTCTTTCTCTTTTGCAACCAGG 59.995 47.826 0.00 0.00 0.00 4.45
1380 4191 8.642935 TGGTTTTTATCATTGTTCATACCTCA 57.357 30.769 0.00 0.00 0.00 3.86
1404 4215 1.899142 TCACGGTTCTCATGGTGATGA 59.101 47.619 0.00 0.00 34.71 2.92
1423 4234 4.933505 TGAAATTGTTGATGCAGTGGAA 57.066 36.364 0.00 0.00 0.00 3.53
1473 4291 5.819379 ACAGATATGAGGTAGTGCACATTTG 59.181 40.000 21.04 8.85 0.00 2.32
1492 4310 8.702438 CACATTTGCAGTTAATTCTACCTTTTG 58.298 33.333 0.00 0.00 0.00 2.44
1915 4733 1.303309 GGTGATTCTGATTGGCCTCG 58.697 55.000 3.32 0.00 0.00 4.63
1923 4741 1.447838 GATTGGCCTCGTCTTCGCA 60.448 57.895 3.32 0.00 36.96 5.10
1980 4798 7.066163 GGCGTGGTTACAGGTATATTAAAAGTT 59.934 37.037 0.00 0.00 35.03 2.66
1992 4811 7.271868 GGTATATTAAAAGTTCACAACGCCAAC 59.728 37.037 0.00 0.00 36.23 3.77
1994 4813 1.178276 AAAGTTCACAACGCCAACCA 58.822 45.000 0.00 0.00 36.23 3.67
2015 4834 5.295540 ACCACAACATACAAAACAAAATGCC 59.704 36.000 0.00 0.00 0.00 4.40
2021 4840 5.007528 ACATACAAAACAAAATGCCACTTGC 59.992 36.000 0.00 0.00 41.77 4.01
2225 5062 4.828387 TCAATATGCTGCCAATAATGCTCA 59.172 37.500 0.00 0.00 0.00 4.26
2306 5145 3.759618 ACTGATAGCTAGCTACCGGAATC 59.240 47.826 28.68 20.65 0.00 2.52
2324 5163 5.861787 CGGAATCACACGACAGCATATATAA 59.138 40.000 0.00 0.00 0.00 0.98
2464 5396 7.948278 AATTAACCATATCTCGCTCACTAAC 57.052 36.000 0.00 0.00 0.00 2.34
2500 5432 2.519771 ATGCACATGGTGGAGTCAAT 57.480 45.000 0.00 0.00 37.30 2.57
2525 5457 6.048732 TGCTGAACTGGTCTACATAAATGA 57.951 37.500 0.00 0.00 0.00 2.57
2565 5497 5.645497 ACCTGCTCTATTGACTTTTGCTAAG 59.355 40.000 0.00 0.00 0.00 2.18
2573 5505 9.944376 TCTATTGACTTTTGCTAAGAACACTAT 57.056 29.630 6.22 0.00 0.00 2.12
2632 5574 2.824041 GCGGTGGAATGACGGCAT 60.824 61.111 0.00 0.00 40.79 4.40
2634 5576 2.525248 CGGTGGAATGACGGCATCG 61.525 63.158 2.98 0.00 43.02 3.84
2728 5670 5.583495 TCGATGGGTTAACTTGTTTGTTTG 58.417 37.500 5.42 0.00 0.00 2.93
2822 5764 2.604686 TCCAGCACGCTCCTCCTT 60.605 61.111 0.00 0.00 0.00 3.36
2843 5785 2.835764 TCTTGGCCTACAAAGATACGGT 59.164 45.455 3.32 0.00 38.91 4.83
2978 5920 4.423231 CCCAAGCTCAAGGGGAAC 57.577 61.111 10.29 0.00 45.08 3.62
2981 5923 1.073199 CAAGCTCAAGGGGAACGGT 59.927 57.895 0.00 0.00 0.00 4.83
3028 5970 0.807667 GGAGCACTAGTCATGCCGTG 60.808 60.000 0.00 0.00 44.53 4.94
3056 6007 8.726988 GTGTGGATTGCTAAAAACTATCAACTA 58.273 33.333 0.00 0.00 28.37 2.24
3072 6023 9.614792 ACTATCAACTATGAAAATGTTACTCCC 57.385 33.333 0.00 0.00 39.49 4.30
3073 6024 9.838339 CTATCAACTATGAAAATGTTACTCCCT 57.162 33.333 0.00 0.00 39.49 4.20
3074 6025 8.738645 ATCAACTATGAAAATGTTACTCCCTC 57.261 34.615 0.00 0.00 39.49 4.30
3075 6026 7.110155 TCAACTATGAAAATGTTACTCCCTCC 58.890 38.462 0.00 0.00 30.99 4.30
3076 6027 5.671493 ACTATGAAAATGTTACTCCCTCCG 58.329 41.667 0.00 0.00 0.00 4.63
3077 6028 4.569719 ATGAAAATGTTACTCCCTCCGT 57.430 40.909 0.00 0.00 0.00 4.69
3078 6029 3.934068 TGAAAATGTTACTCCCTCCGTC 58.066 45.455 0.00 0.00 0.00 4.79
3079 6030 3.268330 GAAAATGTTACTCCCTCCGTCC 58.732 50.000 0.00 0.00 0.00 4.79
3080 6031 0.822164 AATGTTACTCCCTCCGTCCG 59.178 55.000 0.00 0.00 0.00 4.79
3081 6032 1.041447 ATGTTACTCCCTCCGTCCGG 61.041 60.000 0.00 0.00 0.00 5.14
3082 6033 1.379044 GTTACTCCCTCCGTCCGGA 60.379 63.158 0.00 0.00 42.90 5.14
3083 6034 0.967380 GTTACTCCCTCCGTCCGGAA 60.967 60.000 5.23 0.00 44.66 4.30
3084 6035 0.251742 TTACTCCCTCCGTCCGGAAA 60.252 55.000 5.23 0.00 44.66 3.13
3085 6036 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3086 6037 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3087 6038 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3088 6039 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3089 6040 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3090 6041 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3091 6042 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3092 6043 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3093 6044 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
3094 6045 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
3095 6046 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
3097 6048 3.681593 TCCGGAAATACTTGTCGGAAA 57.318 42.857 0.00 0.00 45.40 3.13
3098 6049 4.005487 TCCGGAAATACTTGTCGGAAAA 57.995 40.909 0.00 0.00 45.40 2.29
3099 6050 4.387598 TCCGGAAATACTTGTCGGAAAAA 58.612 39.130 0.00 0.00 45.40 1.94
3100 6051 5.005094 TCCGGAAATACTTGTCGGAAAAAT 58.995 37.500 0.00 0.00 45.40 1.82
3101 6052 5.092781 CCGGAAATACTTGTCGGAAAAATG 58.907 41.667 0.00 0.00 42.94 2.32
3102 6053 4.557301 CGGAAATACTTGTCGGAAAAATGC 59.443 41.667 0.00 0.00 0.00 3.56
3103 6054 5.465935 GGAAATACTTGTCGGAAAAATGCA 58.534 37.500 0.00 0.00 0.00 3.96
3104 6055 6.099341 GGAAATACTTGTCGGAAAAATGCAT 58.901 36.000 0.00 0.00 0.00 3.96
3105 6056 6.034898 GGAAATACTTGTCGGAAAAATGCATG 59.965 38.462 0.00 0.00 0.00 4.06
3106 6057 5.895636 ATACTTGTCGGAAAAATGCATGA 57.104 34.783 0.00 0.00 0.00 3.07
3107 6058 4.582701 ACTTGTCGGAAAAATGCATGAA 57.417 36.364 0.00 0.00 0.00 2.57
3108 6059 4.942852 ACTTGTCGGAAAAATGCATGAAA 58.057 34.783 0.00 0.00 0.00 2.69
3109 6060 5.355596 ACTTGTCGGAAAAATGCATGAAAA 58.644 33.333 0.00 0.00 0.00 2.29
3110 6061 5.990996 ACTTGTCGGAAAAATGCATGAAAAT 59.009 32.000 0.00 0.00 0.00 1.82
3111 6062 5.842619 TGTCGGAAAAATGCATGAAAATG 57.157 34.783 0.00 0.00 0.00 2.32
3112 6063 4.689812 TGTCGGAAAAATGCATGAAAATGG 59.310 37.500 0.00 0.00 0.00 3.16
3113 6064 4.928615 GTCGGAAAAATGCATGAAAATGGA 59.071 37.500 0.00 0.00 0.00 3.41
3114 6065 5.581874 GTCGGAAAAATGCATGAAAATGGAT 59.418 36.000 0.00 0.00 33.93 3.41
3115 6066 5.581479 TCGGAAAAATGCATGAAAATGGATG 59.419 36.000 0.00 0.00 32.82 3.51
3116 6067 5.352016 CGGAAAAATGCATGAAAATGGATGT 59.648 36.000 0.00 0.00 32.82 3.06
3117 6068 6.534436 CGGAAAAATGCATGAAAATGGATGTA 59.466 34.615 0.00 0.00 32.82 2.29
3118 6069 7.225145 CGGAAAAATGCATGAAAATGGATGTAT 59.775 33.333 0.00 0.00 32.82 2.29
3119 6070 8.553696 GGAAAAATGCATGAAAATGGATGTATC 58.446 33.333 0.00 0.00 32.82 2.24
3120 6071 9.321562 GAAAAATGCATGAAAATGGATGTATCT 57.678 29.630 0.00 0.00 32.82 1.98
3122 6073 9.976511 AAAATGCATGAAAATGGATGTATCTAG 57.023 29.630 0.00 0.00 32.82 2.43
3123 6074 8.929260 AATGCATGAAAATGGATGTATCTAGA 57.071 30.769 0.00 0.00 32.82 2.43
3124 6075 8.929260 ATGCATGAAAATGGATGTATCTAGAA 57.071 30.769 0.00 0.00 31.25 2.10
3125 6076 8.929260 TGCATGAAAATGGATGTATCTAGAAT 57.071 30.769 0.00 0.00 0.00 2.40
3126 6077 9.358406 TGCATGAAAATGGATGTATCTAGAATT 57.642 29.630 0.00 0.00 0.00 2.17
3153 6104 7.884816 AATACGTCTAAATACATCCATTCCG 57.115 36.000 0.00 0.00 0.00 4.30
3154 6105 4.056050 ACGTCTAAATACATCCATTCCGC 58.944 43.478 0.00 0.00 0.00 5.54
3155 6106 3.432252 CGTCTAAATACATCCATTCCGCC 59.568 47.826 0.00 0.00 0.00 6.13
3156 6107 3.432252 GTCTAAATACATCCATTCCGCCG 59.568 47.826 0.00 0.00 0.00 6.46
3157 6108 2.631160 AAATACATCCATTCCGCCGA 57.369 45.000 0.00 0.00 0.00 5.54
3158 6109 1.878953 AATACATCCATTCCGCCGAC 58.121 50.000 0.00 0.00 0.00 4.79
3159 6110 0.756294 ATACATCCATTCCGCCGACA 59.244 50.000 0.00 0.00 0.00 4.35
3160 6111 0.537653 TACATCCATTCCGCCGACAA 59.462 50.000 0.00 0.00 0.00 3.18
3161 6112 0.744414 ACATCCATTCCGCCGACAAG 60.744 55.000 0.00 0.00 0.00 3.16
3162 6113 0.744414 CATCCATTCCGCCGACAAGT 60.744 55.000 0.00 0.00 0.00 3.16
3163 6114 0.828022 ATCCATTCCGCCGACAAGTA 59.172 50.000 0.00 0.00 0.00 2.24
3164 6115 0.828022 TCCATTCCGCCGACAAGTAT 59.172 50.000 0.00 0.00 0.00 2.12
3165 6116 1.208535 TCCATTCCGCCGACAAGTATT 59.791 47.619 0.00 0.00 0.00 1.89
3166 6117 2.014128 CCATTCCGCCGACAAGTATTT 58.986 47.619 0.00 0.00 0.00 1.40
3167 6118 2.031683 CCATTCCGCCGACAAGTATTTC 59.968 50.000 0.00 0.00 0.00 2.17
3168 6119 1.729284 TTCCGCCGACAAGTATTTCC 58.271 50.000 0.00 0.00 0.00 3.13
3169 6120 0.458889 TCCGCCGACAAGTATTTCCG 60.459 55.000 0.00 0.00 0.00 4.30
3170 6121 1.426041 CCGCCGACAAGTATTTCCGG 61.426 60.000 0.00 0.00 42.74 5.14
3171 6122 0.458889 CGCCGACAAGTATTTCCGGA 60.459 55.000 0.00 0.00 42.49 5.14
3172 6123 1.004595 GCCGACAAGTATTTCCGGAC 58.995 55.000 1.83 0.00 42.49 4.79
3173 6124 1.274596 CCGACAAGTATTTCCGGACG 58.725 55.000 1.83 0.00 42.49 4.79
3174 6125 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
3175 6126 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
3176 6127 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
3177 6128 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3178 6129 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3179 6130 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3180 6131 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3181 6132 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3182 6133 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3183 6134 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.000 13.64 0.00 46.06 2.12
3184 6135 0.032813 TTCCGGACGGAGGGAGTATT 60.033 55.000 13.64 0.00 46.06 1.89
3185 6136 0.032813 TCCGGACGGAGGGAGTATTT 60.033 55.000 9.76 0.00 39.76 1.40
3186 6137 1.215173 TCCGGACGGAGGGAGTATTTA 59.785 52.381 9.76 0.00 39.76 1.40
3187 6138 1.339291 CCGGACGGAGGGAGTATTTAC 59.661 57.143 4.40 0.00 37.50 2.01
3228 6179 5.989551 AAACATGGTTGCTCATTTTGTTC 57.010 34.783 0.00 0.00 0.00 3.18
3326 6388 4.670896 AGGTTGGTTCCTTCACAAATTG 57.329 40.909 0.00 0.00 33.52 2.32
3624 6772 3.349006 CTGTTCGTGGCGCTGCTT 61.349 61.111 7.64 0.00 0.00 3.91
3648 6796 0.385751 ACATAGCCGTCATCTCCGTG 59.614 55.000 0.00 0.00 0.00 4.94
3767 6919 8.450964 GGTACATAACAACACGACTAGTTAGTA 58.549 37.037 0.00 0.00 36.50 1.82
3777 6929 8.961294 ACACGACTAGTTAGTACAAAGTATTG 57.039 34.615 0.00 0.00 38.41 1.90
3800 6952 9.719355 ATTGACACAAGATAATACAGTACAACA 57.281 29.630 0.00 0.00 0.00 3.33
3801 6953 9.549078 TTGACACAAGATAATACAGTACAACAA 57.451 29.630 0.00 0.00 0.00 2.83
3802 6954 9.719355 TGACACAAGATAATACAGTACAACAAT 57.281 29.630 0.00 0.00 0.00 2.71
3822 6974 9.372541 CAACAATTAGATTGAAATGTTTTGTGC 57.627 29.630 7.59 0.00 42.83 4.57
3873 7025 1.428219 CAGCTCGATCGTGTACGGT 59.572 57.895 15.94 0.00 40.29 4.83
4073 7265 2.159531 CGTGCATGTATCTGTGGGTTTG 60.160 50.000 0.00 0.00 0.00 2.93
4085 7277 2.227194 GTGGGTTTGTTGGTCTGGTAG 58.773 52.381 0.00 0.00 0.00 3.18
4322 7524 0.809385 TCCTCTCTTTACACGAGCCG 59.191 55.000 0.00 0.00 0.00 5.52
4418 7621 1.939934 CTGCTCGGTCAGAAAACACAA 59.060 47.619 0.00 0.00 36.19 3.33
4437 7646 6.414732 ACACAAACACACATATATAGTGCCT 58.585 36.000 14.25 3.42 40.59 4.75
4539 7753 9.415544 CTAGCAAATTAAGCATCTGAAAACTTT 57.584 29.630 5.70 0.00 0.00 2.66
4587 7801 5.126067 ACGGAATGATTGGGTTCTATCTTG 58.874 41.667 0.00 0.00 0.00 3.02
4957 8203 1.069703 CGATGCACTTGACCACTTGTG 60.070 52.381 0.00 0.00 0.00 3.33
4995 8245 3.447742 GTCCAAGCTGAACCAAACAAAG 58.552 45.455 0.00 0.00 0.00 2.77
5026 8283 0.179100 AGCATCTGGACGACCGATTG 60.179 55.000 8.07 2.94 39.42 2.67
5060 8321 7.588854 TGATTATAATGCTAGTACAACGTCGTC 59.411 37.037 1.78 0.00 0.00 4.20
5062 8323 1.147473 TGCTAGTACAACGTCGTCGA 58.853 50.000 9.47 0.00 40.62 4.20
5064 8325 2.099621 GCTAGTACAACGTCGTCGATG 58.900 52.381 12.90 12.90 43.62 3.84
5065 8326 2.701807 CTAGTACAACGTCGTCGATGG 58.298 52.381 18.28 7.02 42.61 3.51
5066 8327 1.159285 AGTACAACGTCGTCGATGGA 58.841 50.000 18.28 5.25 42.61 3.41
5067 8328 1.741706 AGTACAACGTCGTCGATGGAT 59.258 47.619 18.28 4.47 42.61 3.41
5068 8329 1.844357 GTACAACGTCGTCGATGGATG 59.156 52.381 18.28 17.22 42.61 3.51
5574 8835 0.826715 TCTTCCCTCCAGCTGATTCG 59.173 55.000 17.39 0.00 0.00 3.34
5583 8844 0.249657 CAGCTGATTCGGTCTAGCCC 60.250 60.000 8.42 0.00 33.92 5.19
5584 8845 1.069935 GCTGATTCGGTCTAGCCCC 59.930 63.158 0.00 0.00 0.00 5.80
5585 8846 1.364171 CTGATTCGGTCTAGCCCCG 59.636 63.158 12.85 12.85 46.83 5.73
5586 8847 2.029221 GATTCGGTCTAGCCCCGC 59.971 66.667 13.90 0.04 45.09 6.13
5587 8848 3.843117 GATTCGGTCTAGCCCCGCG 62.843 68.421 13.90 0.00 45.09 6.46
5628 8889 6.972328 TCTGTTTATCGCAAATTAAATGCTCC 59.028 34.615 12.92 0.00 41.64 4.70
5642 8903 2.507102 CTCCTACGTGCGTGCAGG 60.507 66.667 12.54 12.54 37.77 4.85
5647 8908 1.005512 TACGTGCGTGCAGGTCATT 60.006 52.632 21.76 2.43 42.92 2.57
5662 8923 2.548067 GGTCATTGTGTTCTCGTGGACT 60.548 50.000 0.00 0.00 0.00 3.85
5695 8956 2.864097 GCTCATCGGCATCAACGTCTAT 60.864 50.000 0.00 0.00 0.00 1.98
5734 8995 1.380302 GGGGTGGCTCATCAACAGT 59.620 57.895 0.00 0.00 0.00 3.55
5768 9029 2.342279 CCAAGGTGCTCGTCGGAA 59.658 61.111 0.00 0.00 0.00 4.30
5956 9217 2.731571 GGCAGACATACCGCTCCCA 61.732 63.158 0.00 0.00 0.00 4.37
6116 9393 6.164259 CGTGTATACGTGTCAAAATTCGTAC 58.836 40.000 3.56 0.00 44.99 3.67
6141 9421 9.167311 ACCATTTTATCAGAGTTTCTCATACAC 57.833 33.333 0.00 0.00 32.06 2.90
6142 9422 9.388506 CCATTTTATCAGAGTTTCTCATACACT 57.611 33.333 0.00 0.00 32.06 3.55
6144 9424 9.606631 ATTTTATCAGAGTTTCTCATACACTCC 57.393 33.333 0.00 0.00 38.17 3.85
6145 9425 5.606348 ATCAGAGTTTCTCATACACTCCC 57.394 43.478 0.00 0.00 38.17 4.30
6146 9426 4.678256 TCAGAGTTTCTCATACACTCCCT 58.322 43.478 0.00 0.00 38.17 4.20
6147 9427 4.707448 TCAGAGTTTCTCATACACTCCCTC 59.293 45.833 0.00 0.00 38.17 4.30
6148 9428 4.027437 AGAGTTTCTCATACACTCCCTCC 58.973 47.826 0.00 0.00 38.17 4.30
6149 9429 2.761208 AGTTTCTCATACACTCCCTCCG 59.239 50.000 0.00 0.00 0.00 4.63
6150 9430 2.496470 GTTTCTCATACACTCCCTCCGT 59.504 50.000 0.00 0.00 0.00 4.69
6151 9431 2.526888 TCTCATACACTCCCTCCGTT 57.473 50.000 0.00 0.00 0.00 4.44
6152 9432 2.376109 TCTCATACACTCCCTCCGTTC 58.624 52.381 0.00 0.00 0.00 3.95
6153 9433 1.409427 CTCATACACTCCCTCCGTTCC 59.591 57.143 0.00 0.00 0.00 3.62
6154 9434 1.006758 TCATACACTCCCTCCGTTCCT 59.993 52.381 0.00 0.00 0.00 3.36
6155 9435 2.242965 TCATACACTCCCTCCGTTCCTA 59.757 50.000 0.00 0.00 0.00 2.94
6156 9436 2.905415 TACACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
6157 9437 2.019807 ACACTCCCTCCGTTCCTAAA 57.980 50.000 0.00 0.00 0.00 1.85
6158 9438 2.547990 ACACTCCCTCCGTTCCTAAAT 58.452 47.619 0.00 0.00 0.00 1.40
6159 9439 3.716431 ACACTCCCTCCGTTCCTAAATA 58.284 45.455 0.00 0.00 0.00 1.40
6160 9440 3.450096 ACACTCCCTCCGTTCCTAAATAC 59.550 47.826 0.00 0.00 0.00 1.89
6161 9441 3.705072 CACTCCCTCCGTTCCTAAATACT 59.295 47.826 0.00 0.00 0.00 2.12
6162 9442 4.161754 CACTCCCTCCGTTCCTAAATACTT 59.838 45.833 0.00 0.00 0.00 2.24
6163 9443 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
6164 9444 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
6165 9445 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
6166 9446 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
6167 9447 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
6168 9448 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
6169 9449 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
6170 9450 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
6171 9451 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
6172 9452 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
6173 9453 8.248945 CCGTTCCTAAATACTTGTCTTTCTAGA 58.751 37.037 0.00 0.00 0.00 2.43
6197 9477 9.302345 AGACATTTCAAATGACTACTACATACG 57.698 33.333 17.30 0.00 0.00 3.06
6198 9478 8.420374 ACATTTCAAATGACTACTACATACGG 57.580 34.615 17.30 0.00 0.00 4.02
6199 9479 8.255206 ACATTTCAAATGACTACTACATACGGA 58.745 33.333 17.30 0.00 0.00 4.69
6200 9480 9.261180 CATTTCAAATGACTACTACATACGGAT 57.739 33.333 3.82 0.00 0.00 4.18
6201 9481 8.642908 TTTCAAATGACTACTACATACGGATG 57.357 34.615 5.94 5.94 39.16 3.51
6203 9483 8.454570 TCAAATGACTACTACATACGGATGTA 57.545 34.615 19.32 19.32 44.77 2.29
6204 9484 9.074576 TCAAATGACTACTACATACGGATGTAT 57.925 33.333 20.64 13.02 45.42 2.29
6222 9502 9.077674 CGGATGTATGTAGACATATTTTAGAGC 57.922 37.037 5.69 0.00 40.18 4.09
6223 9503 9.077674 GGATGTATGTAGACATATTTTAGAGCG 57.922 37.037 5.69 0.00 40.18 5.03
6224 9504 9.627395 GATGTATGTAGACATATTTTAGAGCGT 57.373 33.333 5.69 0.00 40.18 5.07
6230 9510 9.894783 TGTAGACATATTTTAGAGCGTAGATTC 57.105 33.333 0.00 0.00 0.00 2.52
6231 9511 9.894783 GTAGACATATTTTAGAGCGTAGATTCA 57.105 33.333 0.00 0.00 0.00 2.57
6232 9512 8.804688 AGACATATTTTAGAGCGTAGATTCAC 57.195 34.615 0.00 0.00 0.00 3.18
6233 9513 8.634444 AGACATATTTTAGAGCGTAGATTCACT 58.366 33.333 0.00 0.00 0.00 3.41
6234 9514 8.804688 ACATATTTTAGAGCGTAGATTCACTC 57.195 34.615 0.00 0.00 0.00 3.51
6235 9515 8.414003 ACATATTTTAGAGCGTAGATTCACTCA 58.586 33.333 0.00 0.00 0.00 3.41
6236 9516 9.416794 CATATTTTAGAGCGTAGATTCACTCAT 57.583 33.333 0.00 0.00 0.00 2.90
6237 9517 9.988815 ATATTTTAGAGCGTAGATTCACTCATT 57.011 29.630 0.00 0.00 0.00 2.57
6238 9518 8.723942 ATTTTAGAGCGTAGATTCACTCATTT 57.276 30.769 0.00 0.00 0.00 2.32
6239 9519 8.547967 TTTTAGAGCGTAGATTCACTCATTTT 57.452 30.769 0.00 0.00 0.00 1.82
6240 9520 7.525688 TTAGAGCGTAGATTCACTCATTTTG 57.474 36.000 0.00 0.00 0.00 2.44
6241 9521 4.331168 AGAGCGTAGATTCACTCATTTTGC 59.669 41.667 0.00 0.00 0.00 3.68
6242 9522 4.256920 AGCGTAGATTCACTCATTTTGCT 58.743 39.130 0.00 0.00 0.00 3.91
6243 9523 4.697352 AGCGTAGATTCACTCATTTTGCTT 59.303 37.500 0.00 0.00 0.00 3.91
6244 9524 5.182001 AGCGTAGATTCACTCATTTTGCTTT 59.818 36.000 0.00 0.00 0.00 3.51
6245 9525 5.284660 GCGTAGATTCACTCATTTTGCTTTG 59.715 40.000 0.00 0.00 0.00 2.77
6246 9526 6.373779 CGTAGATTCACTCATTTTGCTTTGT 58.626 36.000 0.00 0.00 0.00 2.83
6247 9527 7.518161 CGTAGATTCACTCATTTTGCTTTGTA 58.482 34.615 0.00 0.00 0.00 2.41
6248 9528 8.177663 CGTAGATTCACTCATTTTGCTTTGTAT 58.822 33.333 0.00 0.00 0.00 2.29
6249 9529 9.282247 GTAGATTCACTCATTTTGCTTTGTATG 57.718 33.333 0.00 0.00 0.00 2.39
6250 9530 7.889469 AGATTCACTCATTTTGCTTTGTATGT 58.111 30.769 0.00 0.00 0.00 2.29
6251 9531 9.013229 AGATTCACTCATTTTGCTTTGTATGTA 57.987 29.630 0.00 0.00 0.00 2.29
6252 9532 9.282247 GATTCACTCATTTTGCTTTGTATGTAG 57.718 33.333 0.00 0.00 0.00 2.74
6253 9533 7.744087 TCACTCATTTTGCTTTGTATGTAGT 57.256 32.000 0.00 0.00 0.00 2.73
6254 9534 7.806690 TCACTCATTTTGCTTTGTATGTAGTC 58.193 34.615 0.00 0.00 0.00 2.59
6255 9535 7.443879 TCACTCATTTTGCTTTGTATGTAGTCA 59.556 33.333 0.00 0.00 0.00 3.41
6256 9536 7.535258 CACTCATTTTGCTTTGTATGTAGTCAC 59.465 37.037 0.00 0.00 0.00 3.67
6257 9537 7.445402 ACTCATTTTGCTTTGTATGTAGTCACT 59.555 33.333 0.00 0.00 0.00 3.41
6258 9538 8.165239 TCATTTTGCTTTGTATGTAGTCACTT 57.835 30.769 0.00 0.00 0.00 3.16
6259 9539 8.075574 TCATTTTGCTTTGTATGTAGTCACTTG 58.924 33.333 0.00 0.00 0.00 3.16
6260 9540 6.935741 TTTGCTTTGTATGTAGTCACTTGT 57.064 33.333 0.00 0.00 0.00 3.16
6261 9541 6.935741 TTGCTTTGTATGTAGTCACTTGTT 57.064 33.333 0.00 0.00 0.00 2.83
6262 9542 6.299023 TGCTTTGTATGTAGTCACTTGTTG 57.701 37.500 0.00 0.00 0.00 3.33
6263 9543 6.052360 TGCTTTGTATGTAGTCACTTGTTGA 58.948 36.000 0.00 0.00 0.00 3.18
6264 9544 6.540551 TGCTTTGTATGTAGTCACTTGTTGAA 59.459 34.615 0.00 0.00 35.39 2.69
6265 9545 7.066404 TGCTTTGTATGTAGTCACTTGTTGAAA 59.934 33.333 0.00 0.00 35.39 2.69
6266 9546 8.076178 GCTTTGTATGTAGTCACTTGTTGAAAT 58.924 33.333 0.00 0.00 35.39 2.17
6267 9547 9.385902 CTTTGTATGTAGTCACTTGTTGAAATG 57.614 33.333 0.00 0.00 35.39 2.32
6268 9548 6.898041 TGTATGTAGTCACTTGTTGAAATGC 58.102 36.000 0.00 0.00 35.39 3.56
6269 9549 4.829064 TGTAGTCACTTGTTGAAATGCC 57.171 40.909 0.00 0.00 35.39 4.40
6270 9550 4.460263 TGTAGTCACTTGTTGAAATGCCT 58.540 39.130 0.00 0.00 35.39 4.75
6271 9551 5.616270 TGTAGTCACTTGTTGAAATGCCTA 58.384 37.500 0.00 0.00 35.39 3.93
6272 9552 5.700832 TGTAGTCACTTGTTGAAATGCCTAG 59.299 40.000 0.00 0.00 35.39 3.02
6273 9553 4.973168 AGTCACTTGTTGAAATGCCTAGA 58.027 39.130 0.00 0.00 35.39 2.43
6274 9554 5.376625 AGTCACTTGTTGAAATGCCTAGAA 58.623 37.500 0.00 0.00 35.39 2.10
6275 9555 5.827797 AGTCACTTGTTGAAATGCCTAGAAA 59.172 36.000 0.00 0.00 35.39 2.52
6276 9556 6.016777 AGTCACTTGTTGAAATGCCTAGAAAG 60.017 38.462 0.00 0.00 35.39 2.62
6277 9557 6.017109 GTCACTTGTTGAAATGCCTAGAAAGA 60.017 38.462 0.00 0.00 35.39 2.52
6278 9558 6.017109 TCACTTGTTGAAATGCCTAGAAAGAC 60.017 38.462 0.00 0.00 0.00 3.01
6279 9559 5.827797 ACTTGTTGAAATGCCTAGAAAGACA 59.172 36.000 0.00 0.00 0.00 3.41
6280 9560 6.321181 ACTTGTTGAAATGCCTAGAAAGACAA 59.679 34.615 0.00 0.00 0.00 3.18
6281 9561 6.317789 TGTTGAAATGCCTAGAAAGACAAG 57.682 37.500 0.00 0.00 0.00 3.16
6282 9562 5.827797 TGTTGAAATGCCTAGAAAGACAAGT 59.172 36.000 0.00 0.00 0.00 3.16
6283 9563 6.995686 TGTTGAAATGCCTAGAAAGACAAGTA 59.004 34.615 0.00 0.00 0.00 2.24
6284 9564 7.665559 TGTTGAAATGCCTAGAAAGACAAGTAT 59.334 33.333 0.00 0.00 0.00 2.12
6285 9565 8.515414 GTTGAAATGCCTAGAAAGACAAGTATT 58.485 33.333 0.00 0.00 0.00 1.89
6286 9566 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
6287 9567 9.733556 TGAAATGCCTAGAAAGACAAGTATTTA 57.266 29.630 0.00 0.00 0.00 1.40
6289 9569 8.738645 AATGCCTAGAAAGACAAGTATTTAGG 57.261 34.615 5.26 5.26 0.00 2.69
6290 9570 7.490657 TGCCTAGAAAGACAAGTATTTAGGA 57.509 36.000 11.40 0.00 26.70 2.94
6291 9571 7.913789 TGCCTAGAAAGACAAGTATTTAGGAA 58.086 34.615 11.40 1.02 26.70 3.36
6292 9572 7.822822 TGCCTAGAAAGACAAGTATTTAGGAAC 59.177 37.037 11.40 0.00 26.70 3.62
6293 9573 7.010275 GCCTAGAAAGACAAGTATTTAGGAACG 59.990 40.741 11.40 0.00 26.70 3.95
6294 9574 7.491696 CCTAGAAAGACAAGTATTTAGGAACGG 59.508 40.741 4.01 0.00 26.70 4.44
6295 9575 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
6296 9576 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
6297 9577 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
6298 9578 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
6299 9579 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
6300 9580 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
6301 9581 3.991683 AGTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
6302 9582 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
6303 9583 5.713807 AGTATTTAGGAACGGAGGGAGTAT 58.286 41.667 0.00 0.00 0.00 2.12
6304 9584 4.957684 ATTTAGGAACGGAGGGAGTATG 57.042 45.455 0.00 0.00 0.00 2.39
6305 9585 3.393426 TTAGGAACGGAGGGAGTATGT 57.607 47.619 0.00 0.00 0.00 2.29
6306 9586 1.486211 AGGAACGGAGGGAGTATGTG 58.514 55.000 0.00 0.00 0.00 3.21
6307 9587 1.006758 AGGAACGGAGGGAGTATGTGA 59.993 52.381 0.00 0.00 0.00 3.58
6308 9588 2.040178 GGAACGGAGGGAGTATGTGAT 58.960 52.381 0.00 0.00 0.00 3.06
6309 9589 2.434702 GGAACGGAGGGAGTATGTGATT 59.565 50.000 0.00 0.00 0.00 2.57
6310 9590 3.640029 GGAACGGAGGGAGTATGTGATTA 59.360 47.826 0.00 0.00 0.00 1.75
6311 9591 4.100498 GGAACGGAGGGAGTATGTGATTAA 59.900 45.833 0.00 0.00 0.00 1.40
6312 9592 4.939052 ACGGAGGGAGTATGTGATTAAG 57.061 45.455 0.00 0.00 0.00 1.85
6313 9593 3.641906 ACGGAGGGAGTATGTGATTAAGG 59.358 47.826 0.00 0.00 0.00 2.69
6314 9594 3.641906 CGGAGGGAGTATGTGATTAAGGT 59.358 47.826 0.00 0.00 0.00 3.50
6315 9595 4.501571 CGGAGGGAGTATGTGATTAAGGTG 60.502 50.000 0.00 0.00 0.00 4.00
6316 9596 4.202367 GGAGGGAGTATGTGATTAAGGTGG 60.202 50.000 0.00 0.00 0.00 4.61
6317 9597 4.631234 AGGGAGTATGTGATTAAGGTGGA 58.369 43.478 0.00 0.00 0.00 4.02
6318 9598 4.409247 AGGGAGTATGTGATTAAGGTGGAC 59.591 45.833 0.00 0.00 0.00 4.02
6319 9599 4.409247 GGGAGTATGTGATTAAGGTGGACT 59.591 45.833 0.00 0.00 0.00 3.85
6320 9600 5.104485 GGGAGTATGTGATTAAGGTGGACTT 60.104 44.000 0.00 0.00 43.28 3.01
6321 9601 5.817816 GGAGTATGTGATTAAGGTGGACTTG 59.182 44.000 0.00 0.00 40.37 3.16
6322 9602 6.374417 AGTATGTGATTAAGGTGGACTTGT 57.626 37.500 0.00 0.00 40.37 3.16
6323 9603 6.779860 AGTATGTGATTAAGGTGGACTTGTT 58.220 36.000 0.00 0.00 40.37 2.83
6324 9604 7.913789 AGTATGTGATTAAGGTGGACTTGTTA 58.086 34.615 0.00 0.00 40.37 2.41
6325 9605 7.822822 AGTATGTGATTAAGGTGGACTTGTTAC 59.177 37.037 0.00 0.00 40.37 2.50
6326 9606 4.992319 TGTGATTAAGGTGGACTTGTTACG 59.008 41.667 0.00 0.00 40.37 3.18
6327 9607 5.221481 TGTGATTAAGGTGGACTTGTTACGA 60.221 40.000 0.00 0.00 40.37 3.43
6328 9608 5.119743 GTGATTAAGGTGGACTTGTTACGAC 59.880 44.000 0.00 0.00 40.37 4.34
6329 9609 4.942761 TTAAGGTGGACTTGTTACGACT 57.057 40.909 0.00 0.00 40.37 4.18
6330 9610 2.814280 AGGTGGACTTGTTACGACTG 57.186 50.000 0.00 0.00 0.00 3.51
6331 9611 2.037144 AGGTGGACTTGTTACGACTGT 58.963 47.619 0.00 0.00 0.00 3.55
6332 9612 2.433239 AGGTGGACTTGTTACGACTGTT 59.567 45.455 0.00 0.00 0.00 3.16
6333 9613 2.798847 GGTGGACTTGTTACGACTGTTC 59.201 50.000 0.00 0.00 0.00 3.18
6334 9614 3.450578 GTGGACTTGTTACGACTGTTCA 58.549 45.455 0.00 0.00 0.00 3.18
6335 9615 3.866910 GTGGACTTGTTACGACTGTTCAA 59.133 43.478 0.00 0.00 0.00 2.69
6336 9616 3.866910 TGGACTTGTTACGACTGTTCAAC 59.133 43.478 0.00 0.00 0.00 3.18
6337 9617 3.246936 GGACTTGTTACGACTGTTCAACC 59.753 47.826 0.00 0.00 0.00 3.77
6338 9618 3.864243 ACTTGTTACGACTGTTCAACCA 58.136 40.909 0.00 0.00 0.00 3.67
6339 9619 4.255301 ACTTGTTACGACTGTTCAACCAA 58.745 39.130 0.00 0.00 0.00 3.67
6340 9620 4.093850 ACTTGTTACGACTGTTCAACCAAC 59.906 41.667 0.00 0.00 35.28 3.77
6341 9621 3.864243 TGTTACGACTGTTCAACCAACT 58.136 40.909 0.00 0.00 35.79 3.16
6555 9836 7.860584 TCCGGATTCATCATGATAATTGGATA 58.139 34.615 8.15 0.00 0.00 2.59
6616 9897 3.900892 CCGGGATGACGAGGGTCG 61.901 72.222 0.00 0.00 46.49 4.79
6847 10128 5.339008 ACAGCCAAGTTCGTCATCTAATA 57.661 39.130 0.00 0.00 0.00 0.98
6849 10130 5.105310 ACAGCCAAGTTCGTCATCTAATACT 60.105 40.000 0.00 0.00 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.609346 AAAAGAGTAAAAGTAGTGCTAAACAGA 57.391 29.630 0.00 0.00 0.00 3.41
56 57 9.892444 TTAGGACTGAGGGAGTATAATAATTGA 57.108 33.333 0.00 0.00 33.83 2.57
69 70 7.182026 TGAGACATTTATTTTAGGACTGAGGGA 59.818 37.037 0.00 0.00 0.00 4.20
70 71 7.338710 TGAGACATTTATTTTAGGACTGAGGG 58.661 38.462 0.00 0.00 0.00 4.30
71 72 8.669243 GTTGAGACATTTATTTTAGGACTGAGG 58.331 37.037 0.00 0.00 0.00 3.86
72 73 8.669243 GGTTGAGACATTTATTTTAGGACTGAG 58.331 37.037 0.00 0.00 0.00 3.35
73 74 8.383175 AGGTTGAGACATTTATTTTAGGACTGA 58.617 33.333 0.00 0.00 0.00 3.41
74 75 8.567285 AGGTTGAGACATTTATTTTAGGACTG 57.433 34.615 0.00 0.00 0.00 3.51
85 86 9.841295 AAAGTTGTACTAAGGTTGAGACATTTA 57.159 29.630 0.00 0.00 31.38 1.40
86 87 8.621286 CAAAGTTGTACTAAGGTTGAGACATTT 58.379 33.333 0.00 0.00 31.38 2.32
87 88 7.773690 ACAAAGTTGTACTAAGGTTGAGACATT 59.226 33.333 0.00 0.00 40.16 2.71
88 89 7.280356 ACAAAGTTGTACTAAGGTTGAGACAT 58.720 34.615 0.00 0.00 40.16 3.06
89 90 6.646267 ACAAAGTTGTACTAAGGTTGAGACA 58.354 36.000 0.00 0.00 40.16 3.41
128 129 8.085909 CCGTCCCAAAATAAGTGTCTTAATTTT 58.914 33.333 1.39 0.00 0.00 1.82
129 130 7.449086 TCCGTCCCAAAATAAGTGTCTTAATTT 59.551 33.333 0.00 0.00 0.00 1.82
130 131 6.943718 TCCGTCCCAAAATAAGTGTCTTAATT 59.056 34.615 0.00 0.00 0.00 1.40
131 132 6.478129 TCCGTCCCAAAATAAGTGTCTTAAT 58.522 36.000 0.00 0.00 0.00 1.40
132 133 5.867330 TCCGTCCCAAAATAAGTGTCTTAA 58.133 37.500 0.00 0.00 0.00 1.85
133 134 5.484715 CTCCGTCCCAAAATAAGTGTCTTA 58.515 41.667 0.00 0.00 0.00 2.10
134 135 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
135 136 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
136 137 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
137 138 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
138 139 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
139 140 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
140 141 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
141 142 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
142 143 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
143 144 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
144 145 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
145 146 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
146 147 0.178926 TTGTACTCCCTCCGTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
147 148 0.042131 ATTGTACTCCCTCCGTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
148 149 1.201424 AATTGTACTCCCTCCGTCCC 58.799 55.000 0.00 0.00 0.00 4.46
149 150 4.476628 TTAAATTGTACTCCCTCCGTCC 57.523 45.455 0.00 0.00 0.00 4.79
150 151 6.576185 TGTATTAAATTGTACTCCCTCCGTC 58.424 40.000 0.00 0.00 0.00 4.79
151 152 6.549433 TGTATTAAATTGTACTCCCTCCGT 57.451 37.500 0.00 0.00 0.00 4.69
152 153 9.720769 AATATGTATTAAATTGTACTCCCTCCG 57.279 33.333 0.00 0.00 0.00 4.63
263 1440 3.885297 GCAATGCTGCCTCTAGGAATTTA 59.115 43.478 0.00 0.00 43.26 1.40
268 1445 1.144716 CGCAATGCTGCCTCTAGGA 59.855 57.895 2.94 0.00 46.56 2.94
270 1447 1.485838 CGACGCAATGCTGCCTCTAG 61.486 60.000 2.94 0.00 46.56 2.43
289 1466 1.073897 AAGCTCTTGTCCTGTGGGC 59.926 57.895 0.00 0.00 0.00 5.36
294 1471 2.925306 GCAAATGCAAGCTCTTGTCCTG 60.925 50.000 10.86 5.51 42.31 3.86
357 3152 2.067013 GCACGACTGGTTCTAACTTCC 58.933 52.381 0.00 0.00 0.00 3.46
407 3202 5.305139 ACCATTTGTTAATTAGGACGTGC 57.695 39.130 0.00 0.00 0.00 5.34
408 3203 5.571357 GCAACCATTTGTTAATTAGGACGTG 59.429 40.000 0.00 0.00 34.69 4.49
443 3238 1.906333 TCGTGTAGGAGCAGGTGCA 60.906 57.895 4.48 0.00 45.16 4.57
449 3244 0.956902 TAGCGTGTCGTGTAGGAGCA 60.957 55.000 0.00 0.00 0.00 4.26
520 3318 2.668625 TGGGTGGTTCTTTGTTTACCC 58.331 47.619 0.00 0.00 46.23 3.69
521 3319 4.149598 AGATGGGTGGTTCTTTGTTTACC 58.850 43.478 0.00 0.00 0.00 2.85
536 3334 3.614568 ATACTTACTCCGGAGATGGGT 57.385 47.619 37.69 27.09 0.00 4.51
656 3454 1.450531 GGAAGCGGCTTGGATGATGG 61.451 60.000 21.70 0.00 0.00 3.51
657 3455 1.450531 GGGAAGCGGCTTGGATGATG 61.451 60.000 21.70 0.00 0.00 3.07
669 3467 3.589654 TTGTCTGCTCGGGGAAGCG 62.590 63.158 0.00 0.00 45.54 4.68
673 3471 1.070786 GTGTTTGTCTGCTCGGGGA 59.929 57.895 0.00 0.00 0.00 4.81
675 3473 1.272490 TCTAGTGTTTGTCTGCTCGGG 59.728 52.381 0.00 0.00 0.00 5.14
678 3476 3.329386 TGCATCTAGTGTTTGTCTGCTC 58.671 45.455 0.00 0.00 0.00 4.26
779 3577 1.205417 GATCAAACAATGGGTGCCAGG 59.795 52.381 0.00 0.00 36.75 4.45
781 3579 1.265236 GGATCAAACAATGGGTGCCA 58.735 50.000 0.00 0.00 38.19 4.92
782 3580 0.173255 CGGATCAAACAATGGGTGCC 59.827 55.000 0.00 0.00 0.00 5.01
783 3581 0.887933 ACGGATCAAACAATGGGTGC 59.112 50.000 0.00 0.00 0.00 5.01
785 3583 1.448985 CGACGGATCAAACAATGGGT 58.551 50.000 0.00 0.00 0.00 4.51
786 3584 0.732571 CCGACGGATCAAACAATGGG 59.267 55.000 8.64 0.00 0.00 4.00
787 3585 0.732571 CCCGACGGATCAAACAATGG 59.267 55.000 17.49 0.00 0.00 3.16
790 3588 0.953471 CTGCCCGACGGATCAAACAA 60.953 55.000 17.49 0.00 0.00 2.83
791 3589 1.375396 CTGCCCGACGGATCAAACA 60.375 57.895 17.49 2.66 0.00 2.83
865 3667 3.279434 GTGGTGCTTAAATAGACCCAGG 58.721 50.000 0.00 0.00 0.00 4.45
866 3668 3.279434 GGTGGTGCTTAAATAGACCCAG 58.721 50.000 0.00 0.00 0.00 4.45
1070 3875 0.883833 AAACTTCTTGCCATCCTGCG 59.116 50.000 0.00 0.00 0.00 5.18
1138 3944 5.104776 AGCTTCTTCTACATATGTGCAAGGA 60.105 40.000 18.81 12.73 0.00 3.36
1139 3945 5.121811 AGCTTCTTCTACATATGTGCAAGG 58.878 41.667 18.81 8.87 0.00 3.61
1144 3950 6.700020 CAAACGAGCTTCTTCTACATATGTG 58.300 40.000 18.81 8.56 0.00 3.21
1145 3951 5.292101 GCAAACGAGCTTCTTCTACATATGT 59.708 40.000 13.93 13.93 0.00 2.29
1153 3959 2.533266 TGAGCAAACGAGCTTCTTCT 57.467 45.000 0.00 0.00 46.75 2.85
1214 4020 3.771798 TGTACAGCGCACATATCGTAAA 58.228 40.909 11.47 0.00 0.00 2.01
1224 4035 2.815647 GGCTCCTGTACAGCGCAC 60.816 66.667 26.39 16.81 37.81 5.34
1302 4113 1.450312 CTCACAGTTGCCGGGATCC 60.450 63.158 1.92 1.92 0.00 3.36
1308 4119 2.738213 AAGGGCTCTCACAGTTGCCG 62.738 60.000 0.00 0.00 45.75 5.69
1321 4132 2.640284 AGAGAAAGAGGAGAAGGGCT 57.360 50.000 0.00 0.00 0.00 5.19
1328 4139 3.885297 TGGTTGCAAAAGAGAAAGAGGAG 59.115 43.478 0.00 0.00 0.00 3.69
1329 4140 3.885297 CTGGTTGCAAAAGAGAAAGAGGA 59.115 43.478 0.00 0.00 0.00 3.71
1330 4141 3.005155 CCTGGTTGCAAAAGAGAAAGAGG 59.995 47.826 0.00 0.00 0.00 3.69
1331 4142 3.633986 ACCTGGTTGCAAAAGAGAAAGAG 59.366 43.478 0.00 0.00 0.00 2.85
1334 4145 3.381272 CAGACCTGGTTGCAAAAGAGAAA 59.619 43.478 0.00 0.00 0.00 2.52
1335 4146 2.951642 CAGACCTGGTTGCAAAAGAGAA 59.048 45.455 0.00 0.00 0.00 2.87
1336 4147 2.575532 CAGACCTGGTTGCAAAAGAGA 58.424 47.619 0.00 0.00 0.00 3.10
1352 4163 8.739972 AGGTATGAACAATGATAAAAACCAGAC 58.260 33.333 0.00 0.00 0.00 3.51
1380 4191 0.836400 ACCATGAGAACCGTGACCCT 60.836 55.000 0.00 0.00 33.60 4.34
1404 4215 4.050553 CGTTTCCACTGCATCAACAATTT 58.949 39.130 0.00 0.00 0.00 1.82
1806 4624 3.897505 CTCCTTTTGGTTTTGGGATGAGT 59.102 43.478 0.00 0.00 41.38 3.41
1915 4733 3.775202 ACTGTATGATCAGTGCGAAGAC 58.225 45.455 0.09 0.00 45.40 3.01
1980 4798 0.960861 TGTTGTGGTTGGCGTTGTGA 60.961 50.000 0.00 0.00 0.00 3.58
1992 4811 5.295292 TGGCATTTTGTTTTGTATGTTGTGG 59.705 36.000 0.00 0.00 0.00 4.17
1994 4813 6.112058 AGTGGCATTTTGTTTTGTATGTTGT 58.888 32.000 0.00 0.00 0.00 3.32
2015 4834 0.917259 CGAGTTAGCTAGCGCAAGTG 59.083 55.000 11.47 0.00 39.10 3.16
2021 4840 0.726452 GGCGATCGAGTTAGCTAGCG 60.726 60.000 21.57 4.39 0.00 4.26
2158 4990 4.464951 AGAAAAAGATGGCATGCTGATTCA 59.535 37.500 18.92 6.86 0.00 2.57
2225 5062 2.146342 CTGAGACGCCAACTTTGTGAT 58.854 47.619 0.00 0.00 0.00 3.06
2293 5132 1.402968 GTCGTGTGATTCCGGTAGCTA 59.597 52.381 0.00 0.00 0.00 3.32
2297 5136 0.108992 GCTGTCGTGTGATTCCGGTA 60.109 55.000 0.00 0.00 0.00 4.02
2298 5137 1.374252 GCTGTCGTGTGATTCCGGT 60.374 57.895 0.00 0.00 0.00 5.28
2306 5145 3.679980 GGCCTTATATATGCTGTCGTGTG 59.320 47.826 0.00 0.00 0.00 3.82
2455 5386 6.369065 ACTTGCTATTAGTGTTGTTAGTGAGC 59.631 38.462 0.00 0.00 0.00 4.26
2500 5432 7.791029 TCATTTATGTAGACCAGTTCAGCATA 58.209 34.615 0.00 0.00 0.00 3.14
2525 5457 4.718961 AGCAGGTCAGTGACAAAGTAATT 58.281 39.130 24.20 0.00 33.68 1.40
2565 5497 2.099621 CGTCGTCGCTACATAGTGTTC 58.900 52.381 0.00 0.00 35.41 3.18
2573 5505 1.782569 CTTGTTTTCGTCGTCGCTACA 59.217 47.619 0.00 0.00 36.96 2.74
2624 5566 1.529226 ATTTTCAACCGATGCCGTCA 58.471 45.000 0.00 0.00 0.00 4.35
2632 5574 4.902443 TGTTGTTGCTATTTTCAACCGA 57.098 36.364 0.00 0.00 42.17 4.69
2634 5576 8.082242 ACTAGATTGTTGTTGCTATTTTCAACC 58.918 33.333 0.00 0.00 42.17 3.77
2710 5652 3.513662 ACGCAAACAAACAAGTTAACCC 58.486 40.909 0.88 0.00 0.00 4.11
2728 5670 2.025727 CCGTCCCGATCACTACGC 59.974 66.667 5.46 0.00 34.13 4.42
2822 5764 2.835764 ACCGTATCTTTGTAGGCCAAGA 59.164 45.455 5.01 5.47 33.75 3.02
2843 5785 1.831389 GAAACTCGAGCTTGCGCACA 61.831 55.000 11.12 0.00 39.10 4.57
2999 5941 2.303549 CTAGTGCTCCAAGGAGGGCG 62.304 65.000 17.34 0.00 42.19 6.13
3028 5970 7.377766 TGATAGTTTTTAGCAATCCACACTC 57.622 36.000 0.00 0.00 0.00 3.51
3056 6007 4.514401 GACGGAGGGAGTAACATTTTCAT 58.486 43.478 0.00 0.00 0.00 2.57
3068 6019 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3070 6021 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3071 6022 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3072 6023 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
3073 6024 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
3074 6025 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
3075 6026 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
3076 6027 2.660189 TCCGACAAGTATTTCCGGAC 57.340 50.000 1.83 0.00 43.47 4.79
3077 6028 3.681593 TTTCCGACAAGTATTTCCGGA 57.318 42.857 0.00 0.00 46.18 5.14
3078 6029 4.752661 TTTTTCCGACAAGTATTTCCGG 57.247 40.909 0.00 0.00 41.36 5.14
3079 6030 4.557301 GCATTTTTCCGACAAGTATTTCCG 59.443 41.667 0.00 0.00 0.00 4.30
3080 6031 5.465935 TGCATTTTTCCGACAAGTATTTCC 58.534 37.500 0.00 0.00 0.00 3.13
3081 6032 6.806249 TCATGCATTTTTCCGACAAGTATTTC 59.194 34.615 0.00 0.00 0.00 2.17
3082 6033 6.686630 TCATGCATTTTTCCGACAAGTATTT 58.313 32.000 0.00 0.00 0.00 1.40
3083 6034 6.266168 TCATGCATTTTTCCGACAAGTATT 57.734 33.333 0.00 0.00 0.00 1.89
3084 6035 5.895636 TCATGCATTTTTCCGACAAGTAT 57.104 34.783 0.00 0.00 0.00 2.12
3085 6036 5.697473 TTCATGCATTTTTCCGACAAGTA 57.303 34.783 0.00 0.00 0.00 2.24
3086 6037 4.582701 TTCATGCATTTTTCCGACAAGT 57.417 36.364 0.00 0.00 0.00 3.16
3087 6038 5.903764 TTTTCATGCATTTTTCCGACAAG 57.096 34.783 0.00 0.00 0.00 3.16
3088 6039 5.178996 CCATTTTCATGCATTTTTCCGACAA 59.821 36.000 0.00 0.00 0.00 3.18
3089 6040 4.689812 CCATTTTCATGCATTTTTCCGACA 59.310 37.500 0.00 0.00 0.00 4.35
3090 6041 4.928615 TCCATTTTCATGCATTTTTCCGAC 59.071 37.500 0.00 0.00 0.00 4.79
3091 6042 5.144692 TCCATTTTCATGCATTTTTCCGA 57.855 34.783 0.00 0.00 0.00 4.55
3092 6043 5.352016 ACATCCATTTTCATGCATTTTTCCG 59.648 36.000 0.00 0.00 0.00 4.30
3093 6044 6.746745 ACATCCATTTTCATGCATTTTTCC 57.253 33.333 0.00 0.00 0.00 3.13
3094 6045 9.321562 AGATACATCCATTTTCATGCATTTTTC 57.678 29.630 0.00 0.00 0.00 2.29
3096 6047 9.976511 CTAGATACATCCATTTTCATGCATTTT 57.023 29.630 0.00 0.00 0.00 1.82
3097 6048 9.358406 TCTAGATACATCCATTTTCATGCATTT 57.642 29.630 0.00 0.00 0.00 2.32
3098 6049 8.929260 TCTAGATACATCCATTTTCATGCATT 57.071 30.769 0.00 0.00 0.00 3.56
3099 6050 8.929260 TTCTAGATACATCCATTTTCATGCAT 57.071 30.769 0.00 0.00 0.00 3.96
3100 6051 8.929260 ATTCTAGATACATCCATTTTCATGCA 57.071 30.769 0.00 0.00 0.00 3.96
3127 6078 8.770828 CGGAATGGATGTATTTAGACGTATTTT 58.229 33.333 0.00 0.00 0.00 1.82
3128 6079 7.095355 GCGGAATGGATGTATTTAGACGTATTT 60.095 37.037 0.00 0.00 0.00 1.40
3129 6080 6.367969 GCGGAATGGATGTATTTAGACGTATT 59.632 38.462 0.00 0.00 0.00 1.89
3130 6081 5.867716 GCGGAATGGATGTATTTAGACGTAT 59.132 40.000 0.00 0.00 0.00 3.06
3131 6082 5.224888 GCGGAATGGATGTATTTAGACGTA 58.775 41.667 0.00 0.00 0.00 3.57
3132 6083 4.056050 GCGGAATGGATGTATTTAGACGT 58.944 43.478 0.00 0.00 0.00 4.34
3133 6084 3.432252 GGCGGAATGGATGTATTTAGACG 59.568 47.826 0.00 0.00 0.00 4.18
3134 6085 3.432252 CGGCGGAATGGATGTATTTAGAC 59.568 47.826 0.00 0.00 0.00 2.59
3135 6086 3.322541 TCGGCGGAATGGATGTATTTAGA 59.677 43.478 7.21 0.00 0.00 2.10
3136 6087 3.432252 GTCGGCGGAATGGATGTATTTAG 59.568 47.826 7.21 0.00 0.00 1.85
3137 6088 3.181464 TGTCGGCGGAATGGATGTATTTA 60.181 43.478 7.21 0.00 0.00 1.40
3138 6089 2.218603 GTCGGCGGAATGGATGTATTT 58.781 47.619 7.21 0.00 0.00 1.40
3139 6090 1.140052 TGTCGGCGGAATGGATGTATT 59.860 47.619 7.21 0.00 0.00 1.89
3140 6091 0.756294 TGTCGGCGGAATGGATGTAT 59.244 50.000 7.21 0.00 0.00 2.29
3141 6092 0.537653 TTGTCGGCGGAATGGATGTA 59.462 50.000 7.21 0.00 0.00 2.29
3142 6093 0.744414 CTTGTCGGCGGAATGGATGT 60.744 55.000 7.21 0.00 0.00 3.06
3143 6094 0.744414 ACTTGTCGGCGGAATGGATG 60.744 55.000 7.21 0.00 0.00 3.51
3144 6095 0.828022 TACTTGTCGGCGGAATGGAT 59.172 50.000 7.21 0.00 0.00 3.41
3145 6096 0.828022 ATACTTGTCGGCGGAATGGA 59.172 50.000 7.21 0.00 0.00 3.41
3146 6097 1.663695 AATACTTGTCGGCGGAATGG 58.336 50.000 7.21 0.00 0.00 3.16
3147 6098 2.031683 GGAAATACTTGTCGGCGGAATG 59.968 50.000 7.21 0.42 0.00 2.67
3148 6099 2.285977 GGAAATACTTGTCGGCGGAAT 58.714 47.619 7.21 0.00 0.00 3.01
3149 6100 1.729284 GGAAATACTTGTCGGCGGAA 58.271 50.000 7.21 0.00 0.00 4.30
3150 6101 0.458889 CGGAAATACTTGTCGGCGGA 60.459 55.000 7.21 0.00 0.00 5.54
3151 6102 1.426041 CCGGAAATACTTGTCGGCGG 61.426 60.000 7.21 0.00 34.17 6.13
3152 6103 0.458889 TCCGGAAATACTTGTCGGCG 60.459 55.000 0.00 0.00 40.42 6.46
3153 6104 1.004595 GTCCGGAAATACTTGTCGGC 58.995 55.000 5.23 0.00 40.42 5.54
3154 6105 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
3155 6106 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
3156 6107 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3157 6108 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3158 6109 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3159 6110 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3160 6111 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3161 6112 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3162 6113 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3163 6114 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3164 6115 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
3165 6116 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
3166 6117 0.032813 AAATACTCCCTCCGTCCGGA 60.033 55.000 0.00 0.00 42.90 5.14
3167 6118 1.339291 GTAAATACTCCCTCCGTCCGG 59.661 57.143 0.00 0.00 0.00 5.14
3168 6119 2.305009 AGTAAATACTCCCTCCGTCCG 58.695 52.381 0.00 0.00 0.00 4.79
3169 6120 4.723309 TCTAGTAAATACTCCCTCCGTCC 58.277 47.826 0.00 0.00 37.73 4.79
3170 6121 5.239087 CACTCTAGTAAATACTCCCTCCGTC 59.761 48.000 0.00 0.00 37.73 4.79
3171 6122 5.131784 CACTCTAGTAAATACTCCCTCCGT 58.868 45.833 0.00 0.00 37.73 4.69
3172 6123 4.519730 CCACTCTAGTAAATACTCCCTCCG 59.480 50.000 0.00 0.00 37.73 4.63
3173 6124 4.281435 GCCACTCTAGTAAATACTCCCTCC 59.719 50.000 0.00 0.00 37.73 4.30
3174 6125 5.141910 AGCCACTCTAGTAAATACTCCCTC 58.858 45.833 0.00 0.00 37.73 4.30
3175 6126 5.145513 AGCCACTCTAGTAAATACTCCCT 57.854 43.478 0.00 0.00 37.73 4.20
3176 6127 6.550481 AGTTAGCCACTCTAGTAAATACTCCC 59.450 42.308 0.00 0.00 37.73 4.30
3177 6128 7.585579 AGTTAGCCACTCTAGTAAATACTCC 57.414 40.000 0.00 0.00 37.73 3.85
3186 6137 9.601217 CATGTTTAATTAGTTAGCCACTCTAGT 57.399 33.333 0.00 0.00 36.88 2.57
3187 6138 9.046296 CCATGTTTAATTAGTTAGCCACTCTAG 57.954 37.037 0.00 0.00 36.88 2.43
3228 6179 4.360563 AGAACAAGTTGTGACTGTACTCG 58.639 43.478 9.79 0.00 35.91 4.18
3533 6595 5.805486 CACACATATGTTTAGTACGCAGAGT 59.195 40.000 5.37 0.00 36.72 3.24
3540 6688 7.486870 TGATCGACACACACATATGTTTAGTAC 59.513 37.037 5.37 2.92 36.72 2.73
3624 6772 3.057526 CGGAGATGACGGCTATGTTGATA 60.058 47.826 0.00 0.00 0.00 2.15
3648 6796 3.644399 GAAGCAGACGGTCCCGGAC 62.644 68.421 9.30 9.30 44.69 4.79
3796 6948 9.372541 GCACAAAACATTTCAATCTAATTGTTG 57.627 29.630 0.04 0.00 41.02 3.33
3797 6949 9.328845 AGCACAAAACATTTCAATCTAATTGTT 57.671 25.926 0.04 0.00 41.02 2.83
3798 6950 8.767085 CAGCACAAAACATTTCAATCTAATTGT 58.233 29.630 0.04 0.00 41.02 2.71
3799 6951 8.767085 ACAGCACAAAACATTTCAATCTAATTG 58.233 29.630 0.00 0.00 41.57 2.32
3800 6952 8.891671 ACAGCACAAAACATTTCAATCTAATT 57.108 26.923 0.00 0.00 0.00 1.40
3801 6953 8.767085 CAACAGCACAAAACATTTCAATCTAAT 58.233 29.630 0.00 0.00 0.00 1.73
3802 6954 7.224362 CCAACAGCACAAAACATTTCAATCTAA 59.776 33.333 0.00 0.00 0.00 2.10
3803 6955 6.700960 CCAACAGCACAAAACATTTCAATCTA 59.299 34.615 0.00 0.00 0.00 1.98
3804 6956 5.524646 CCAACAGCACAAAACATTTCAATCT 59.475 36.000 0.00 0.00 0.00 2.40
3822 6974 0.439985 CGTTCTGATGCGTCCAACAG 59.560 55.000 14.85 3.09 41.65 3.16
4073 7265 2.527100 CGATCGAACTACCAGACCAAC 58.473 52.381 10.26 0.00 0.00 3.77
4220 7417 1.380112 GGAGACGACTAGGCTGGGT 60.380 63.158 2.02 0.00 39.26 4.51
4322 7524 3.391296 TCCCTAATATTGACAGTGAGGGC 59.609 47.826 11.09 0.00 41.73 5.19
4418 7621 6.043127 TGGATGAGGCACTATATATGTGTGTT 59.957 38.462 16.65 9.37 41.55 3.32
4437 7646 5.239963 TCGTGCGAAATATAGTAGTGGATGA 59.760 40.000 0.00 0.00 0.00 2.92
4539 7753 3.754323 CGGTTGTTACAAGAAGGGCATAA 59.246 43.478 0.00 0.00 0.00 1.90
4587 7801 7.830940 TGAATGAATGAAACCAATTATGCAC 57.169 32.000 0.00 0.00 0.00 4.57
4995 8245 4.557695 CGTCCAGATGCTTGATAGTACCTC 60.558 50.000 0.00 0.00 0.00 3.85
5060 8321 7.279313 TGCTATTATCAACATGATCATCCATCG 59.721 37.037 4.86 0.00 38.26 3.84
5062 8323 9.121658 GATGCTATTATCAACATGATCATCCAT 57.878 33.333 4.86 0.00 38.26 3.41
5064 8325 8.502105 TGATGCTATTATCAACATGATCATCC 57.498 34.615 4.86 0.57 38.26 3.51
5065 8326 9.937175 CATGATGCTATTATCAACATGATCATC 57.063 33.333 4.86 9.99 43.20 2.92
5066 8327 9.681062 TCATGATGCTATTATCAACATGATCAT 57.319 29.630 13.33 1.18 43.78 2.45
5096 8357 7.383300 AGTGAAATACAAGCTCAATTTTGCTTC 59.617 33.333 10.66 2.15 46.29 3.86
5557 8818 0.909610 ACCGAATCAGCTGGAGGGAA 60.910 55.000 15.13 0.00 0.00 3.97
5628 8889 1.014044 AATGACCTGCACGCACGTAG 61.014 55.000 0.00 0.00 0.00 3.51
5642 8903 2.731976 GAGTCCACGAGAACACAATGAC 59.268 50.000 0.00 0.00 0.00 3.06
5647 8908 1.068588 CCAAGAGTCCACGAGAACACA 59.931 52.381 0.00 0.00 0.00 3.72
5734 8995 4.752879 GCGTAGGTGGGCAGCGAA 62.753 66.667 0.00 0.00 0.00 4.70
5768 9029 2.244117 ATCAGCGGGCAGACGACAAT 62.244 55.000 0.00 0.00 35.47 2.71
6108 9385 9.449719 AGAAACTCTGATAAAATGGTACGAATT 57.550 29.630 0.00 0.00 0.00 2.17
6111 9388 7.608153 TGAGAAACTCTGATAAAATGGTACGA 58.392 34.615 0.00 0.00 0.00 3.43
6116 9393 9.388506 AGTGTATGAGAAACTCTGATAAAATGG 57.611 33.333 0.00 0.00 24.77 3.16
6139 9419 3.705072 AGTATTTAGGAACGGAGGGAGTG 59.295 47.826 0.00 0.00 0.00 3.51
6140 9420 3.991683 AGTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
6141 9421 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
6142 9422 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
6143 9423 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
6144 9424 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
6145 9425 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
6146 9426 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
6147 9427 8.248945 TCTAGAAAGACAAGTATTTAGGAACGG 58.751 37.037 0.00 0.00 0.00 4.44
6171 9451 9.302345 CGTATGTAGTAGTCATTTGAAATGTCT 57.698 33.333 18.62 18.62 0.00 3.41
6172 9452 8.540492 CCGTATGTAGTAGTCATTTGAAATGTC 58.460 37.037 16.62 11.74 0.00 3.06
6173 9453 8.255206 TCCGTATGTAGTAGTCATTTGAAATGT 58.745 33.333 16.62 2.38 0.00 2.71
6174 9454 8.642908 TCCGTATGTAGTAGTCATTTGAAATG 57.357 34.615 11.54 11.54 0.00 2.32
6175 9455 9.261180 CATCCGTATGTAGTAGTCATTTGAAAT 57.739 33.333 0.00 0.00 0.00 2.17
6176 9456 8.255206 ACATCCGTATGTAGTAGTCATTTGAAA 58.745 33.333 0.00 0.00 44.66 2.69
6177 9457 7.778083 ACATCCGTATGTAGTAGTCATTTGAA 58.222 34.615 0.00 0.00 44.66 2.69
6178 9458 7.342769 ACATCCGTATGTAGTAGTCATTTGA 57.657 36.000 0.00 0.00 44.66 2.69
6196 9476 9.077674 GCTCTAAAATATGTCTACATACATCCG 57.922 37.037 4.98 0.00 41.15 4.18
6197 9477 9.077674 CGCTCTAAAATATGTCTACATACATCC 57.922 37.037 4.98 0.00 41.15 3.51
6198 9478 9.627395 ACGCTCTAAAATATGTCTACATACATC 57.373 33.333 4.98 0.00 41.15 3.06
6204 9484 9.894783 GAATCTACGCTCTAAAATATGTCTACA 57.105 33.333 0.00 0.00 0.00 2.74
6205 9485 9.894783 TGAATCTACGCTCTAAAATATGTCTAC 57.105 33.333 0.00 0.00 0.00 2.59
6206 9486 9.894783 GTGAATCTACGCTCTAAAATATGTCTA 57.105 33.333 0.00 0.00 0.00 2.59
6207 9487 8.634444 AGTGAATCTACGCTCTAAAATATGTCT 58.366 33.333 0.00 0.00 0.00 3.41
6208 9488 8.804688 AGTGAATCTACGCTCTAAAATATGTC 57.195 34.615 0.00 0.00 0.00 3.06
6209 9489 8.414003 TGAGTGAATCTACGCTCTAAAATATGT 58.586 33.333 0.00 0.00 44.58 2.29
6210 9490 8.803201 TGAGTGAATCTACGCTCTAAAATATG 57.197 34.615 0.00 0.00 44.58 1.78
6211 9491 9.988815 AATGAGTGAATCTACGCTCTAAAATAT 57.011 29.630 0.00 0.00 44.58 1.28
6212 9492 9.817809 AAATGAGTGAATCTACGCTCTAAAATA 57.182 29.630 0.00 0.00 44.58 1.40
6213 9493 8.723942 AAATGAGTGAATCTACGCTCTAAAAT 57.276 30.769 0.00 0.00 44.58 1.82
6214 9494 8.443160 CAAAATGAGTGAATCTACGCTCTAAAA 58.557 33.333 0.00 0.00 44.58 1.52
6215 9495 7.413000 GCAAAATGAGTGAATCTACGCTCTAAA 60.413 37.037 0.00 0.00 44.58 1.85
6216 9496 6.036083 GCAAAATGAGTGAATCTACGCTCTAA 59.964 38.462 0.00 0.00 44.58 2.10
6217 9497 5.520288 GCAAAATGAGTGAATCTACGCTCTA 59.480 40.000 0.00 0.00 44.58 2.43
6218 9498 4.331168 GCAAAATGAGTGAATCTACGCTCT 59.669 41.667 0.00 0.00 44.58 4.09
6219 9499 4.331168 AGCAAAATGAGTGAATCTACGCTC 59.669 41.667 0.00 0.00 44.55 5.03
6220 9500 4.256920 AGCAAAATGAGTGAATCTACGCT 58.743 39.130 0.00 0.00 0.00 5.07
6221 9501 4.606457 AGCAAAATGAGTGAATCTACGC 57.394 40.909 0.00 0.00 0.00 4.42
6222 9502 6.373779 ACAAAGCAAAATGAGTGAATCTACG 58.626 36.000 0.00 0.00 0.00 3.51
6223 9503 9.282247 CATACAAAGCAAAATGAGTGAATCTAC 57.718 33.333 0.00 0.00 0.00 2.59
6224 9504 9.013229 ACATACAAAGCAAAATGAGTGAATCTA 57.987 29.630 0.00 0.00 0.00 1.98
6225 9505 7.889469 ACATACAAAGCAAAATGAGTGAATCT 58.111 30.769 0.00 0.00 0.00 2.40
6226 9506 9.282247 CTACATACAAAGCAAAATGAGTGAATC 57.718 33.333 0.00 0.00 0.00 2.52
6227 9507 8.796475 ACTACATACAAAGCAAAATGAGTGAAT 58.204 29.630 0.00 0.00 0.00 2.57
6228 9508 8.165239 ACTACATACAAAGCAAAATGAGTGAA 57.835 30.769 0.00 0.00 0.00 3.18
6229 9509 7.443879 TGACTACATACAAAGCAAAATGAGTGA 59.556 33.333 0.00 0.00 0.00 3.41
6230 9510 7.535258 GTGACTACATACAAAGCAAAATGAGTG 59.465 37.037 0.00 0.00 0.00 3.51
6231 9511 7.445402 AGTGACTACATACAAAGCAAAATGAGT 59.555 33.333 0.00 0.00 0.00 3.41
6232 9512 7.810658 AGTGACTACATACAAAGCAAAATGAG 58.189 34.615 0.00 0.00 0.00 2.90
6233 9513 7.744087 AGTGACTACATACAAAGCAAAATGA 57.256 32.000 0.00 0.00 0.00 2.57
6234 9514 7.862372 ACAAGTGACTACATACAAAGCAAAATG 59.138 33.333 0.00 0.00 0.00 2.32
6235 9515 7.940850 ACAAGTGACTACATACAAAGCAAAAT 58.059 30.769 0.00 0.00 0.00 1.82
6236 9516 7.328277 ACAAGTGACTACATACAAAGCAAAA 57.672 32.000 0.00 0.00 0.00 2.44
6237 9517 6.935741 ACAAGTGACTACATACAAAGCAAA 57.064 33.333 0.00 0.00 0.00 3.68
6238 9518 6.540551 TCAACAAGTGACTACATACAAAGCAA 59.459 34.615 0.00 0.00 0.00 3.91
6239 9519 6.052360 TCAACAAGTGACTACATACAAAGCA 58.948 36.000 0.00 0.00 0.00 3.91
6240 9520 6.539649 TCAACAAGTGACTACATACAAAGC 57.460 37.500 0.00 0.00 0.00 3.51
6241 9521 9.385902 CATTTCAACAAGTGACTACATACAAAG 57.614 33.333 0.00 0.00 35.39 2.77
6242 9522 7.860373 GCATTTCAACAAGTGACTACATACAAA 59.140 33.333 0.00 0.00 35.39 2.83
6243 9523 7.359595 GCATTTCAACAAGTGACTACATACAA 58.640 34.615 0.00 0.00 35.39 2.41
6244 9524 6.072728 GGCATTTCAACAAGTGACTACATACA 60.073 38.462 0.00 0.00 35.39 2.29
6245 9525 6.149474 AGGCATTTCAACAAGTGACTACATAC 59.851 38.462 0.00 0.00 35.84 2.39
6246 9526 6.237901 AGGCATTTCAACAAGTGACTACATA 58.762 36.000 0.00 0.00 35.84 2.29
6247 9527 5.072741 AGGCATTTCAACAAGTGACTACAT 58.927 37.500 0.00 0.00 35.84 2.29
6248 9528 4.460263 AGGCATTTCAACAAGTGACTACA 58.540 39.130 0.00 0.00 35.84 2.74
6249 9529 5.932303 TCTAGGCATTTCAACAAGTGACTAC 59.068 40.000 0.00 0.00 38.51 2.73
6250 9530 6.109156 TCTAGGCATTTCAACAAGTGACTA 57.891 37.500 0.00 0.00 38.51 2.59
6251 9531 4.973168 TCTAGGCATTTCAACAAGTGACT 58.027 39.130 0.00 0.00 40.60 3.41
6252 9532 5.689383 TTCTAGGCATTTCAACAAGTGAC 57.311 39.130 0.00 0.00 35.39 3.67
6253 9533 6.017109 GTCTTTCTAGGCATTTCAACAAGTGA 60.017 38.462 0.00 0.00 0.00 3.41
6254 9534 6.145535 GTCTTTCTAGGCATTTCAACAAGTG 58.854 40.000 0.00 0.00 0.00 3.16
6255 9535 5.827797 TGTCTTTCTAGGCATTTCAACAAGT 59.172 36.000 0.00 0.00 29.10 3.16
6256 9536 6.317789 TGTCTTTCTAGGCATTTCAACAAG 57.682 37.500 0.00 0.00 29.10 3.16
6257 9537 6.321181 ACTTGTCTTTCTAGGCATTTCAACAA 59.679 34.615 0.00 0.00 35.56 2.83
6258 9538 5.827797 ACTTGTCTTTCTAGGCATTTCAACA 59.172 36.000 0.00 0.00 35.56 3.33
6259 9539 6.319141 ACTTGTCTTTCTAGGCATTTCAAC 57.681 37.500 0.00 0.00 35.56 3.18
6260 9540 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
6261 9541 8.635765 AAATACTTGTCTTTCTAGGCATTTCA 57.364 30.769 0.00 0.00 35.56 2.69
6263 9543 9.178758 CCTAAATACTTGTCTTTCTAGGCATTT 57.821 33.333 0.00 0.00 35.56 2.32
6264 9544 8.548877 TCCTAAATACTTGTCTTTCTAGGCATT 58.451 33.333 0.00 0.00 35.56 3.56
6265 9545 8.090788 TCCTAAATACTTGTCTTTCTAGGCAT 57.909 34.615 0.00 0.00 35.56 4.40
6266 9546 7.490657 TCCTAAATACTTGTCTTTCTAGGCA 57.509 36.000 0.00 0.00 33.22 4.75
6267 9547 7.010275 CGTTCCTAAATACTTGTCTTTCTAGGC 59.990 40.741 0.00 0.00 0.00 3.93
6268 9548 7.491696 CCGTTCCTAAATACTTGTCTTTCTAGG 59.508 40.741 0.00 0.00 0.00 3.02
6269 9549 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
6270 9550 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
6271 9551 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
6272 9552 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
6273 9553 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
6274 9554 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
6275 9555 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
6276 9556 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
6277 9557 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
6278 9558 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
6279 9559 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
6280 9560 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
6281 9561 5.303845 ACATACTCCCTCCGTTCCTAAATAC 59.696 44.000 0.00 0.00 0.00 1.89
6282 9562 5.303589 CACATACTCCCTCCGTTCCTAAATA 59.696 44.000 0.00 0.00 0.00 1.40
6283 9563 4.101119 CACATACTCCCTCCGTTCCTAAAT 59.899 45.833 0.00 0.00 0.00 1.40
6284 9564 3.449737 CACATACTCCCTCCGTTCCTAAA 59.550 47.826 0.00 0.00 0.00 1.85
6285 9565 3.028850 CACATACTCCCTCCGTTCCTAA 58.971 50.000 0.00 0.00 0.00 2.69
6286 9566 2.242965 TCACATACTCCCTCCGTTCCTA 59.757 50.000 0.00 0.00 0.00 2.94
6287 9567 1.006758 TCACATACTCCCTCCGTTCCT 59.993 52.381 0.00 0.00 0.00 3.36
6288 9568 1.481871 TCACATACTCCCTCCGTTCC 58.518 55.000 0.00 0.00 0.00 3.62
6289 9569 3.821421 AATCACATACTCCCTCCGTTC 57.179 47.619 0.00 0.00 0.00 3.95
6290 9570 4.101119 CCTTAATCACATACTCCCTCCGTT 59.899 45.833 0.00 0.00 0.00 4.44
6291 9571 3.641906 CCTTAATCACATACTCCCTCCGT 59.358 47.826 0.00 0.00 0.00 4.69
6292 9572 3.641906 ACCTTAATCACATACTCCCTCCG 59.358 47.826 0.00 0.00 0.00 4.63
6293 9573 4.202367 CCACCTTAATCACATACTCCCTCC 60.202 50.000 0.00 0.00 0.00 4.30
6294 9574 4.654262 TCCACCTTAATCACATACTCCCTC 59.346 45.833 0.00 0.00 0.00 4.30
6295 9575 4.409247 GTCCACCTTAATCACATACTCCCT 59.591 45.833 0.00 0.00 0.00 4.20
6296 9576 4.409247 AGTCCACCTTAATCACATACTCCC 59.591 45.833 0.00 0.00 0.00 4.30
6297 9577 5.615925 AGTCCACCTTAATCACATACTCC 57.384 43.478 0.00 0.00 0.00 3.85
6298 9578 6.407202 ACAAGTCCACCTTAATCACATACTC 58.593 40.000 0.00 0.00 0.00 2.59
6299 9579 6.374417 ACAAGTCCACCTTAATCACATACT 57.626 37.500 0.00 0.00 0.00 2.12
6300 9580 7.201496 CGTAACAAGTCCACCTTAATCACATAC 60.201 40.741 0.00 0.00 0.00 2.39
6301 9581 6.814644 CGTAACAAGTCCACCTTAATCACATA 59.185 38.462 0.00 0.00 0.00 2.29
6302 9582 5.642063 CGTAACAAGTCCACCTTAATCACAT 59.358 40.000 0.00 0.00 0.00 3.21
6303 9583 4.992319 CGTAACAAGTCCACCTTAATCACA 59.008 41.667 0.00 0.00 0.00 3.58
6304 9584 5.119743 GTCGTAACAAGTCCACCTTAATCAC 59.880 44.000 0.00 0.00 0.00 3.06
6305 9585 5.011329 AGTCGTAACAAGTCCACCTTAATCA 59.989 40.000 0.00 0.00 0.00 2.57
6306 9586 5.347907 CAGTCGTAACAAGTCCACCTTAATC 59.652 44.000 0.00 0.00 0.00 1.75
6307 9587 5.221581 ACAGTCGTAACAAGTCCACCTTAAT 60.222 40.000 0.00 0.00 0.00 1.40
6308 9588 4.099881 ACAGTCGTAACAAGTCCACCTTAA 59.900 41.667 0.00 0.00 0.00 1.85
6309 9589 3.638160 ACAGTCGTAACAAGTCCACCTTA 59.362 43.478 0.00 0.00 0.00 2.69
6310 9590 2.433239 ACAGTCGTAACAAGTCCACCTT 59.567 45.455 0.00 0.00 0.00 3.50
6311 9591 2.037144 ACAGTCGTAACAAGTCCACCT 58.963 47.619 0.00 0.00 0.00 4.00
6312 9592 2.521105 ACAGTCGTAACAAGTCCACC 57.479 50.000 0.00 0.00 0.00 4.61
6313 9593 3.450578 TGAACAGTCGTAACAAGTCCAC 58.549 45.455 0.00 0.00 0.00 4.02
6314 9594 3.804786 TGAACAGTCGTAACAAGTCCA 57.195 42.857 0.00 0.00 0.00 4.02
6315 9595 3.246936 GGTTGAACAGTCGTAACAAGTCC 59.753 47.826 0.00 0.00 0.00 3.85
6316 9596 3.866910 TGGTTGAACAGTCGTAACAAGTC 59.133 43.478 0.00 0.00 0.00 3.01
6317 9597 3.864243 TGGTTGAACAGTCGTAACAAGT 58.136 40.909 0.00 0.00 0.00 3.16
6318 9598 4.331717 AGTTGGTTGAACAGTCGTAACAAG 59.668 41.667 0.00 0.00 36.98 3.16
6319 9599 4.093703 CAGTTGGTTGAACAGTCGTAACAA 59.906 41.667 0.00 0.00 36.98 2.83
6320 9600 3.619483 CAGTTGGTTGAACAGTCGTAACA 59.381 43.478 0.00 0.00 36.98 2.41
6321 9601 3.001939 CCAGTTGGTTGAACAGTCGTAAC 59.998 47.826 0.00 0.00 36.98 2.50
6322 9602 3.199677 CCAGTTGGTTGAACAGTCGTAA 58.800 45.455 0.00 0.00 36.98 3.18
6323 9603 2.828877 CCAGTTGGTTGAACAGTCGTA 58.171 47.619 0.00 0.00 36.98 3.43
6324 9604 1.663695 CCAGTTGGTTGAACAGTCGT 58.336 50.000 0.00 0.00 36.98 4.34
6325 9605 0.307760 GCCAGTTGGTTGAACAGTCG 59.692 55.000 0.00 0.00 36.98 4.18
6326 9606 1.680338 AGCCAGTTGGTTGAACAGTC 58.320 50.000 0.00 0.00 36.98 3.51
6327 9607 2.143876 AAGCCAGTTGGTTGAACAGT 57.856 45.000 0.00 0.00 36.98 3.55
6337 9617 3.244215 TGAAGTAGTCTCCAAGCCAGTTG 60.244 47.826 0.00 0.00 35.71 3.16
6338 9618 2.972713 TGAAGTAGTCTCCAAGCCAGTT 59.027 45.455 0.00 0.00 0.00 3.16
6339 9619 2.564947 CTGAAGTAGTCTCCAAGCCAGT 59.435 50.000 0.00 0.00 0.00 4.00
6340 9620 2.093764 CCTGAAGTAGTCTCCAAGCCAG 60.094 54.545 0.00 0.00 0.00 4.85
6341 9621 1.902508 CCTGAAGTAGTCTCCAAGCCA 59.097 52.381 0.00 0.00 0.00 4.75
6483 9763 5.299148 CAAATCAGACCATCCAAAAGCAAA 58.701 37.500 0.00 0.00 0.00 3.68
6616 9897 4.498682 GGCATCATCATTTAGCAAGTCACC 60.499 45.833 0.00 0.00 0.00 4.02
6847 10128 2.140792 AGCTCCGGTGGTTCACAGT 61.141 57.895 0.00 0.00 35.86 3.55
6849 10130 2.425592 CAGCTCCGGTGGTTCACA 59.574 61.111 5.29 0.00 35.86 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.