Multiple sequence alignment - TraesCS4B01G299100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G299100 chr4B 100.000 3805 0 0 1 3805 585466135 585462331 0.000000e+00 7027.0
1 TraesCS4B01G299100 chr4B 91.463 82 2 1 3412 3493 585462641 585462565 1.450000e-19 108.0
2 TraesCS4B01G299100 chr4B 91.463 82 2 1 3495 3571 585462724 585462643 1.450000e-19 108.0
3 TraesCS4B01G299100 chr4B 89.286 84 9 0 3654 3737 411629722 411629805 5.200000e-19 106.0
4 TraesCS4B01G299100 chr4D 93.575 2459 107 23 757 3177 467438211 467435766 0.000000e+00 3618.0
5 TraesCS4B01G299100 chr4D 90.578 467 34 8 1 466 467439161 467438704 9.040000e-171 610.0
6 TraesCS4B01G299100 chr4D 89.510 143 10 1 3492 3629 467434170 467434028 3.910000e-40 176.0
7 TraesCS4B01G299100 chr4D 83.815 173 10 8 3336 3491 467434259 467434088 8.520000e-32 148.0
8 TraesCS4B01G299100 chr4D 87.805 82 10 0 3654 3735 386751307 386751226 3.130000e-16 97.1
9 TraesCS4B01G299100 chr4A 92.487 2529 146 21 658 3145 3445815 3448340 0.000000e+00 3578.0
10 TraesCS4B01G299100 chr4A 91.339 381 29 4 1 379 3445081 3445459 5.630000e-143 518.0
11 TraesCS4B01G299100 chr4A 89.011 91 8 2 3192 3281 3448749 3448838 1.120000e-20 111.0
12 TraesCS4B01G299100 chr6D 90.167 600 53 5 1334 1929 450749570 450750167 0.000000e+00 776.0
13 TraesCS4B01G299100 chr6D 91.971 274 19 3 1342 1614 450769930 450770201 7.710000e-102 381.0
14 TraesCS4B01G299100 chr6D 96.319 163 6 0 991 1153 450739114 450739276 6.270000e-68 268.0
15 TraesCS4B01G299100 chr7A 88.667 600 60 6 1334 1929 641827138 641826543 0.000000e+00 725.0
16 TraesCS4B01G299100 chr7A 93.820 178 10 1 991 1168 641827478 641827302 2.250000e-67 267.0
17 TraesCS4B01G299100 chr7A 86.585 82 11 0 3654 3735 735152856 735152937 1.460000e-14 91.6
18 TraesCS4B01G299100 chr7A 86.585 82 11 0 3654 3735 735157778 735157859 1.460000e-14 91.6
19 TraesCS4B01G299100 chr7B 84.355 767 83 28 991 1739 707684876 707684129 0.000000e+00 717.0
20 TraesCS4B01G299100 chr2A 92.405 395 24 5 1334 1724 231291121 231291513 3.320000e-155 558.0
21 TraesCS4B01G299100 chr2A 93.252 163 11 0 991 1153 231290835 231290997 1.370000e-59 241.0
22 TraesCS4B01G299100 chr2A 85.222 203 30 0 1768 1970 121216770 121216972 3.850000e-50 209.0
23 TraesCS4B01G299100 chr2A 94.262 122 7 0 1028 1149 121215763 121215884 1.800000e-43 187.0
24 TraesCS4B01G299100 chr2A 82.857 105 13 3 2059 2158 121217056 121217160 5.240000e-14 89.8
25 TraesCS4B01G299100 chr2B 76.627 415 76 17 1754 2158 171454276 171454679 3.850000e-50 209.0
26 TraesCS4B01G299100 chr2B 94.262 122 7 0 1028 1149 171453266 171453387 1.800000e-43 187.0
27 TraesCS4B01G299100 chr2D 84.729 203 31 0 1768 1970 119264223 119264425 1.790000e-48 204.0
28 TraesCS4B01G299100 chr2D 94.262 122 7 0 1028 1149 119263196 119263317 1.800000e-43 187.0
29 TraesCS4B01G299100 chr3B 88.235 85 10 0 3654 3738 160350403 160350319 6.720000e-18 102.0
30 TraesCS4B01G299100 chr7D 87.356 87 8 3 3654 3738 2016419 2016334 3.130000e-16 97.1
31 TraesCS4B01G299100 chr3D 87.356 87 8 3 3654 3738 289811167 289811082 3.130000e-16 97.1
32 TraesCS4B01G299100 chr1D 87.356 87 8 3 3654 3738 12309088 12309173 3.130000e-16 97.1
33 TraesCS4B01G299100 chr1A 87.805 82 10 0 3655 3736 60811247 60811328 3.130000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G299100 chr4B 585462331 585466135 3804 True 2414.333333 7027 94.308667 1 3805 3 chr4B.!!$R1 3804
1 TraesCS4B01G299100 chr4D 467434028 467439161 5133 True 1138.000000 3618 89.369500 1 3629 4 chr4D.!!$R2 3628
2 TraesCS4B01G299100 chr4A 3445081 3448838 3757 False 1402.333333 3578 90.945667 1 3281 3 chr4A.!!$F1 3280
3 TraesCS4B01G299100 chr6D 450749570 450750167 597 False 776.000000 776 90.167000 1334 1929 1 chr6D.!!$F2 595
4 TraesCS4B01G299100 chr7A 641826543 641827478 935 True 496.000000 725 91.243500 991 1929 2 chr7A.!!$R1 938
5 TraesCS4B01G299100 chr7B 707684129 707684876 747 True 717.000000 717 84.355000 991 1739 1 chr7B.!!$R1 748
6 TraesCS4B01G299100 chr2A 231290835 231291513 678 False 399.500000 558 92.828500 991 1724 2 chr2A.!!$F2 733

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
647 1024 0.535335 TGCCCCGTATTCTCACTGTC 59.465 55.0 0.0 0.0 0.0 3.51 F
1249 1672 0.034089 GTCCCCTATTTGCTGCCAGT 60.034 55.0 0.0 0.0 0.0 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1455 1904 0.309922 GGTTCTCGATGGCGACGATA 59.690 55.0 0.0 0.0 42.51 2.92 R
2966 3428 0.106469 TCTCCCTCTCCCTCATCACG 60.106 60.0 0.0 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 0.693049 GACCCGCATATTCCCCATCT 59.307 55.000 0.00 0.00 0.00 2.90
90 91 5.533903 AGATTGACATCAAGCACTTTTGTCT 59.466 36.000 12.07 0.00 44.03 3.41
295 297 2.738314 GTTGCAATTGCCTGACATTTCC 59.262 45.455 26.94 0.00 41.18 3.13
300 302 1.538047 TTGCCTGACATTTCCTGAGC 58.462 50.000 0.00 0.00 0.00 4.26
315 317 1.301716 GAGCGCACCTTTCCTGTCA 60.302 57.895 11.47 0.00 0.00 3.58
327 329 4.687483 CCTTTCCTGTCAAATGTTGCAATC 59.313 41.667 0.59 0.00 0.00 2.67
337 339 4.717233 AATGTTGCAATCGCCTGAAATA 57.283 36.364 0.59 0.00 37.32 1.40
343 345 3.884693 TGCAATCGCCTGAAATATCATGT 59.115 39.130 0.00 0.00 37.32 3.21
344 346 4.338964 TGCAATCGCCTGAAATATCATGTT 59.661 37.500 0.00 0.00 37.32 2.71
348 350 3.038017 CGCCTGAAATATCATGTTTGCG 58.962 45.455 0.00 0.00 34.37 4.85
401 557 3.441572 CCCAGCACAAGTTTATCTTCCAG 59.558 47.826 0.00 0.00 33.63 3.86
450 606 7.493499 AGATATGAGAATGCTAGCTGGTATT 57.507 36.000 17.23 13.06 0.00 1.89
453 609 5.102953 TGAGAATGCTAGCTGGTATTGTT 57.897 39.130 17.72 6.22 0.00 2.83
454 610 6.233905 TGAGAATGCTAGCTGGTATTGTTA 57.766 37.500 17.72 8.16 0.00 2.41
461 617 4.267928 GCTAGCTGGTATTGTTAGTGTTCG 59.732 45.833 7.70 0.00 0.00 3.95
469 625 6.146510 TGGTATTGTTAGTGTTCGCTTGTTAG 59.853 38.462 0.00 0.00 0.00 2.34
471 627 6.613755 ATTGTTAGTGTTCGCTTGTTAGTT 57.386 33.333 0.00 0.00 0.00 2.24
472 628 5.646467 TGTTAGTGTTCGCTTGTTAGTTC 57.354 39.130 0.00 0.00 0.00 3.01
476 632 7.438757 TGTTAGTGTTCGCTTGTTAGTTCATTA 59.561 33.333 0.00 0.00 0.00 1.90
478 634 6.656003 AGTGTTCGCTTGTTAGTTCATTAAC 58.344 36.000 0.00 0.00 34.78 2.01
480 636 5.049267 TGTTCGCTTGTTAGTTCATTAACCC 60.049 40.000 0.00 0.00 36.15 4.11
502 658 5.308825 CCAACTCTTCACTCCAATGTAGTT 58.691 41.667 0.00 0.00 0.00 2.24
522 678 4.153256 GTTGAAAACGCTATTACCGGTTG 58.847 43.478 15.04 1.92 36.92 3.77
523 679 2.160022 TGAAAACGCTATTACCGGTTGC 59.840 45.455 15.04 11.89 35.54 4.17
524 680 1.089112 AAACGCTATTACCGGTTGCC 58.911 50.000 15.04 0.00 33.84 4.52
528 684 1.746470 GCTATTACCGGTTGCCACTT 58.254 50.000 15.04 0.00 0.00 3.16
529 685 1.400494 GCTATTACCGGTTGCCACTTG 59.600 52.381 15.04 0.00 0.00 3.16
544 700 5.629079 GCCACTTGCATATTCCCTATTAC 57.371 43.478 0.00 0.00 40.77 1.89
545 701 5.316987 GCCACTTGCATATTCCCTATTACT 58.683 41.667 0.00 0.00 40.77 2.24
546 702 5.412904 GCCACTTGCATATTCCCTATTACTC 59.587 44.000 0.00 0.00 40.77 2.59
547 703 6.745474 GCCACTTGCATATTCCCTATTACTCT 60.745 42.308 0.00 0.00 40.77 3.24
548 704 6.652481 CCACTTGCATATTCCCTATTACTCTG 59.348 42.308 0.00 0.00 0.00 3.35
550 706 8.099537 CACTTGCATATTCCCTATTACTCTGAT 58.900 37.037 0.00 0.00 0.00 2.90
554 710 8.708378 TGCATATTCCCTATTACTCTGATATGG 58.292 37.037 0.00 0.00 0.00 2.74
555 711 8.928448 GCATATTCCCTATTACTCTGATATGGA 58.072 37.037 0.00 0.00 0.00 3.41
630 1007 5.704217 TTTCACCGTGTTACAAAAATTGC 57.296 34.783 0.00 0.00 0.00 3.56
631 1008 3.707793 TCACCGTGTTACAAAAATTGCC 58.292 40.909 0.00 0.00 0.00 4.52
632 1009 2.797719 CACCGTGTTACAAAAATTGCCC 59.202 45.455 0.00 0.00 0.00 5.36
633 1010 2.224090 ACCGTGTTACAAAAATTGCCCC 60.224 45.455 0.00 0.00 0.00 5.80
634 1011 2.055100 CGTGTTACAAAAATTGCCCCG 58.945 47.619 0.00 0.00 0.00 5.73
635 1012 2.544069 CGTGTTACAAAAATTGCCCCGT 60.544 45.455 0.00 0.00 0.00 5.28
636 1013 3.304525 CGTGTTACAAAAATTGCCCCGTA 60.305 43.478 0.00 0.00 0.00 4.02
637 1014 4.616373 CGTGTTACAAAAATTGCCCCGTAT 60.616 41.667 0.00 0.00 0.00 3.06
638 1015 5.231702 GTGTTACAAAAATTGCCCCGTATT 58.768 37.500 0.00 0.00 0.00 1.89
639 1016 5.346551 GTGTTACAAAAATTGCCCCGTATTC 59.653 40.000 0.00 0.00 0.00 1.75
640 1017 5.244178 TGTTACAAAAATTGCCCCGTATTCT 59.756 36.000 0.00 0.00 0.00 2.40
641 1018 4.450082 ACAAAAATTGCCCCGTATTCTC 57.550 40.909 0.00 0.00 0.00 2.87
642 1019 3.829601 ACAAAAATTGCCCCGTATTCTCA 59.170 39.130 0.00 0.00 0.00 3.27
643 1020 4.173256 CAAAAATTGCCCCGTATTCTCAC 58.827 43.478 0.00 0.00 0.00 3.51
644 1021 3.366052 AAATTGCCCCGTATTCTCACT 57.634 42.857 0.00 0.00 0.00 3.41
645 1022 2.332063 ATTGCCCCGTATTCTCACTG 57.668 50.000 0.00 0.00 0.00 3.66
646 1023 0.981183 TTGCCCCGTATTCTCACTGT 59.019 50.000 0.00 0.00 0.00 3.55
647 1024 0.535335 TGCCCCGTATTCTCACTGTC 59.465 55.000 0.00 0.00 0.00 3.51
648 1025 0.535335 GCCCCGTATTCTCACTGTCA 59.465 55.000 0.00 0.00 0.00 3.58
649 1026 1.471676 GCCCCGTATTCTCACTGTCAG 60.472 57.143 0.00 0.00 0.00 3.51
650 1027 1.137086 CCCCGTATTCTCACTGTCAGG 59.863 57.143 4.53 0.00 0.00 3.86
651 1028 1.825474 CCCGTATTCTCACTGTCAGGT 59.175 52.381 4.53 0.00 0.00 4.00
652 1029 3.021695 CCCGTATTCTCACTGTCAGGTA 58.978 50.000 4.53 0.00 0.00 3.08
653 1030 3.637229 CCCGTATTCTCACTGTCAGGTAT 59.363 47.826 4.53 0.00 0.00 2.73
654 1031 4.099573 CCCGTATTCTCACTGTCAGGTATT 59.900 45.833 4.53 0.00 0.00 1.89
655 1032 5.301045 CCCGTATTCTCACTGTCAGGTATTA 59.699 44.000 4.53 0.00 0.00 0.98
656 1033 6.015350 CCCGTATTCTCACTGTCAGGTATTAT 60.015 42.308 4.53 0.00 0.00 1.28
683 1061 5.479124 AAAACTGACCCGTATACTTGTCT 57.521 39.130 17.36 2.18 0.00 3.41
688 1066 5.011329 ACTGACCCGTATACTTGTCTTTGAA 59.989 40.000 17.36 2.66 0.00 2.69
802 1212 3.072184 AGGAGAAAGCAGGCCATATGTAG 59.928 47.826 5.01 0.00 0.00 2.74
806 1218 4.901849 AGAAAGCAGGCCATATGTAGAGTA 59.098 41.667 5.01 0.00 0.00 2.59
1164 1586 0.321034 GTACGTCCTCACCCAAACCC 60.321 60.000 0.00 0.00 0.00 4.11
1167 1589 1.379146 GTCCTCACCCAAACCCCTC 59.621 63.158 0.00 0.00 0.00 4.30
1193 1615 2.774774 GAGCTCTTGCGTCGCTTG 59.225 61.111 19.50 10.96 45.42 4.01
1194 1616 2.024319 GAGCTCTTGCGTCGCTTGT 61.024 57.895 19.50 0.00 45.42 3.16
1222 1644 4.125703 GTTGTCCTCATGGATCTAGCTTG 58.874 47.826 0.00 0.00 45.29 4.01
1227 1650 3.306641 CCTCATGGATCTAGCTTGGCTAC 60.307 52.174 0.00 0.00 36.28 3.58
1229 1652 2.067365 TGGATCTAGCTTGGCTACGA 57.933 50.000 0.00 0.00 40.44 3.43
1236 1659 2.359967 GCTTGGCTACGAGTCCCCT 61.360 63.158 0.00 0.00 0.00 4.79
1245 1668 0.107654 ACGAGTCCCCTATTTGCTGC 60.108 55.000 0.00 0.00 0.00 5.25
1246 1669 0.815615 CGAGTCCCCTATTTGCTGCC 60.816 60.000 0.00 0.00 0.00 4.85
1247 1670 0.255890 GAGTCCCCTATTTGCTGCCA 59.744 55.000 0.00 0.00 0.00 4.92
1249 1672 0.034089 GTCCCCTATTTGCTGCCAGT 60.034 55.000 0.00 0.00 0.00 4.00
1271 1694 0.381089 CTAGAACTACCTCGGCACCG 59.619 60.000 1.73 1.73 41.35 4.94
1314 1737 5.163509 TGTGCTAATTAGAGTCGATCTGCTT 60.164 40.000 16.85 4.40 39.20 3.91
1317 1740 4.640789 AATTAGAGTCGATCTGCTTCGT 57.359 40.909 7.40 0.00 39.20 3.85
1324 1747 1.669265 TCGATCTGCTTCGTATCGTGT 59.331 47.619 0.00 0.00 42.32 4.49
1326 1749 3.310501 TCGATCTGCTTCGTATCGTGTAA 59.689 43.478 0.00 0.00 42.32 2.41
1348 1797 3.751621 CGCAAGTGCTTCTTTTCTATGG 58.248 45.455 1.21 0.00 39.32 2.74
1650 2099 1.913762 CCTCACCGACCCAAGGACT 60.914 63.158 0.00 0.00 0.00 3.85
1740 2189 6.037500 CGTTAGATGTGGTGATGTTCATGATT 59.962 38.462 0.00 0.00 0.00 2.57
1742 2191 4.643334 AGATGTGGTGATGTTCATGATTGG 59.357 41.667 0.00 0.00 0.00 3.16
1746 2195 2.355756 GGTGATGTTCATGATTGGGTCG 59.644 50.000 0.00 0.00 0.00 4.79
1844 2293 1.067212 GACTCTCCCATGCGATACGTT 59.933 52.381 0.00 0.00 0.00 3.99
1934 2383 0.842030 TGGTTCTGCAGATGAGGGGT 60.842 55.000 19.04 0.00 0.00 4.95
1946 2395 0.941963 TGAGGGGTACTATCCTGCCT 59.058 55.000 7.49 0.00 32.74 4.75
2014 2463 6.349300 TCAGATTCCTACTAGTTGAATTGCC 58.651 40.000 16.83 8.39 0.00 4.52
2025 2482 2.529780 TGAATTGCCTTGCTTTGTGG 57.470 45.000 0.00 0.00 0.00 4.17
2282 2739 5.766222 CTGAAGGTTTGTTCTCCTTGATTG 58.234 41.667 1.04 0.00 43.12 2.67
2301 2758 5.984926 TGATTGAAAGTTCATTTGCCTTGTC 59.015 36.000 0.00 0.00 37.00 3.18
2362 2819 7.612668 TTGCCATTTGCGTAGTACTAATTAA 57.387 32.000 3.61 0.00 45.60 1.40
2439 2896 7.391554 ACACAAAAGTATCAGACATGCAACTAT 59.608 33.333 0.00 0.00 0.00 2.12
2445 2902 4.424061 TCAGACATGCAACTATTTGTGC 57.576 40.909 0.00 0.00 34.90 4.57
2450 2907 5.352569 AGACATGCAACTATTTGTGCTAGTC 59.647 40.000 0.00 10.78 34.90 2.59
2496 2956 8.072567 GGCATCTTTACTCAATATAGCTTGTTG 58.927 37.037 0.00 0.00 0.00 3.33
2497 2957 8.616076 GCATCTTTACTCAATATAGCTTGTTGT 58.384 33.333 0.00 0.00 0.00 3.32
2548 3008 5.045942 TGCCCTGATGTCTTGACTAATGTTA 60.046 40.000 2.35 0.00 0.00 2.41
2735 3196 2.594592 GCTGTGGAAGGTGCCGTT 60.595 61.111 0.00 0.00 0.00 4.44
2814 3275 1.616374 GCTGGGAGTAGACTAGGATGC 59.384 57.143 0.00 0.00 0.00 3.91
2815 3276 2.754867 GCTGGGAGTAGACTAGGATGCT 60.755 54.545 0.00 0.00 0.00 3.79
2833 3294 2.373169 TGCTCCCTTGAGATGTCTTTGT 59.627 45.455 0.00 0.00 41.42 2.83
2862 3323 9.643693 CTTAAAGTTCATATTTTGTGAGGCATT 57.356 29.630 0.00 0.00 0.00 3.56
2876 3337 6.409704 TGTGAGGCATTAATGGATATCTAGC 58.590 40.000 17.02 0.00 0.00 3.42
2966 3428 4.495911 TGTGATCTCTGCTATCGACATC 57.504 45.455 0.00 0.00 0.00 3.06
3048 3511 6.408039 CGTCTTAATTTTGCAGTGCTTATACG 59.592 38.462 17.60 13.92 0.00 3.06
3109 3573 3.243401 GCTGTTTGGTTTCTCAAATCCGT 60.243 43.478 0.00 0.00 38.64 4.69
3110 3574 4.736464 GCTGTTTGGTTTCTCAAATCCGTT 60.736 41.667 0.00 0.00 38.64 4.44
3111 3575 5.331876 TGTTTGGTTTCTCAAATCCGTTT 57.668 34.783 0.00 0.00 38.64 3.60
3117 3581 7.102847 TGGTTTCTCAAATCCGTTTAAGTTT 57.897 32.000 0.00 0.00 0.00 2.66
3121 3585 8.955002 GTTTCTCAAATCCGTTTAAGTTTCTTC 58.045 33.333 0.00 0.00 0.00 2.87
3131 3595 6.196571 CGTTTAAGTTTCTTCGGTTGTGAAT 58.803 36.000 0.00 0.00 0.00 2.57
3134 3598 3.964909 AGTTTCTTCGGTTGTGAATTGC 58.035 40.909 0.00 0.00 0.00 3.56
3137 3601 1.879380 TCTTCGGTTGTGAATTGCTGG 59.121 47.619 0.00 0.00 0.00 4.85
3177 3641 1.075374 TGGTTCCTGGAATCCCACAAG 59.925 52.381 16.80 0.00 37.58 3.16
3181 3645 2.061848 TCCTGGAATCCCACAAGTTGA 58.938 47.619 10.54 0.00 37.58 3.18
3184 3648 1.144708 TGGAATCCCACAAGTTGAGCA 59.855 47.619 10.54 0.00 37.58 4.26
3185 3649 1.815003 GGAATCCCACAAGTTGAGCAG 59.185 52.381 10.54 0.00 0.00 4.24
3186 3650 1.815003 GAATCCCACAAGTTGAGCAGG 59.185 52.381 10.54 5.73 0.00 4.85
3187 3651 0.038744 ATCCCACAAGTTGAGCAGGG 59.961 55.000 10.54 14.19 37.65 4.45
3189 3653 0.607489 CCCACAAGTTGAGCAGGGAG 60.607 60.000 10.54 0.00 38.60 4.30
3195 5156 3.901844 ACAAGTTGAGCAGGGAGTAGTTA 59.098 43.478 10.54 0.00 0.00 2.24
3203 5164 5.188948 TGAGCAGGGAGTAGTTATGCTTTTA 59.811 40.000 0.00 0.00 46.67 1.52
3204 5165 5.675538 AGCAGGGAGTAGTTATGCTTTTAG 58.324 41.667 0.00 0.00 44.47 1.85
3206 5167 4.816925 CAGGGAGTAGTTATGCTTTTAGGC 59.183 45.833 0.00 0.00 0.00 3.93
3207 5168 4.722279 AGGGAGTAGTTATGCTTTTAGGCT 59.278 41.667 0.00 0.00 0.00 4.58
3209 5170 6.386050 AGGGAGTAGTTATGCTTTTAGGCTTA 59.614 38.462 0.00 0.00 0.00 3.09
3210 5171 7.052248 GGGAGTAGTTATGCTTTTAGGCTTAA 58.948 38.462 0.00 0.00 32.16 1.85
3215 5176 9.813446 GTAGTTATGCTTTTAGGCTTAAGAGTA 57.187 33.333 6.67 4.04 34.23 2.59
3234 5195 8.990163 AAGAGTACTTAATCAAACTCCCAAAA 57.010 30.769 0.00 0.00 39.33 2.44
3277 5238 7.994911 TGCAGAATACATCCTAGATGAACAATT 59.005 33.333 11.40 5.57 0.00 2.32
3293 5254 3.900941 ACAATTGTTCGATCAAACTGCC 58.099 40.909 12.62 0.00 0.00 4.85
3294 5255 3.317711 ACAATTGTTCGATCAAACTGCCA 59.682 39.130 12.62 0.00 0.00 4.92
3295 5256 4.202101 ACAATTGTTCGATCAAACTGCCAA 60.202 37.500 12.62 0.00 0.00 4.52
3296 5257 4.582701 ATTGTTCGATCAAACTGCCAAA 57.417 36.364 12.62 0.00 0.00 3.28
3297 5258 4.582701 TTGTTCGATCAAACTGCCAAAT 57.417 36.364 6.45 0.00 0.00 2.32
3299 5260 4.545610 TGTTCGATCAAACTGCCAAATTC 58.454 39.130 0.00 0.00 0.00 2.17
3301 5262 5.221224 TGTTCGATCAAACTGCCAAATTCTT 60.221 36.000 0.00 0.00 0.00 2.52
3302 5263 5.452078 TCGATCAAACTGCCAAATTCTTT 57.548 34.783 0.00 0.00 0.00 2.52
3303 5264 5.221880 TCGATCAAACTGCCAAATTCTTTG 58.778 37.500 0.00 0.00 40.32 2.77
3305 5266 5.691305 CGATCAAACTGCCAAATTCTTTGAA 59.309 36.000 1.28 0.00 43.26 2.69
3306 5267 6.200665 CGATCAAACTGCCAAATTCTTTGAAA 59.799 34.615 1.28 0.00 43.26 2.69
3307 5268 7.254387 CGATCAAACTGCCAAATTCTTTGAAAA 60.254 33.333 1.28 0.00 43.26 2.29
3308 5269 7.678947 TCAAACTGCCAAATTCTTTGAAAAA 57.321 28.000 1.28 0.00 43.26 1.94
3310 5271 7.173907 TCAAACTGCCAAATTCTTTGAAAAACA 59.826 29.630 1.28 0.00 43.26 2.83
3312 5273 7.018635 ACTGCCAAATTCTTTGAAAAACATG 57.981 32.000 1.28 0.00 43.26 3.21
3313 5274 6.598850 ACTGCCAAATTCTTTGAAAAACATGT 59.401 30.769 0.00 0.00 43.26 3.21
3314 5275 6.783162 TGCCAAATTCTTTGAAAAACATGTG 58.217 32.000 0.00 0.00 43.26 3.21
3315 5276 6.373774 TGCCAAATTCTTTGAAAAACATGTGT 59.626 30.769 0.00 0.00 43.26 3.72
3316 5277 7.550551 TGCCAAATTCTTTGAAAAACATGTGTA 59.449 29.630 0.00 0.00 43.26 2.90
3317 5278 8.063630 GCCAAATTCTTTGAAAAACATGTGTAG 58.936 33.333 0.00 0.00 43.26 2.74
3318 5279 9.311916 CCAAATTCTTTGAAAAACATGTGTAGA 57.688 29.630 0.00 0.00 43.26 2.59
3343 5304 9.213799 GAATACATCCTAGATGAACAAGGAATC 57.786 37.037 11.40 0.00 42.53 2.52
3351 5312 3.423539 TGAACAAGGAATCTGGGAGTG 57.576 47.619 0.00 0.00 0.00 3.51
3353 5314 2.044793 ACAAGGAATCTGGGAGTGGA 57.955 50.000 0.00 0.00 0.00 4.02
3354 5315 1.912043 ACAAGGAATCTGGGAGTGGAG 59.088 52.381 0.00 0.00 0.00 3.86
3358 5319 1.414550 GGAATCTGGGAGTGGAGCTAC 59.585 57.143 0.00 0.00 0.00 3.58
3362 5323 1.115467 CTGGGAGTGGAGCTACGAAT 58.885 55.000 0.00 0.00 0.00 3.34
3363 5324 1.482593 CTGGGAGTGGAGCTACGAATT 59.517 52.381 0.00 0.00 0.00 2.17
3394 5355 5.825507 GCCTGATAATTACTGAAAAGGCTG 58.174 41.667 3.16 0.00 44.44 4.85
3400 5361 5.966742 AATTACTGAAAAGGCTGTCTTCC 57.033 39.130 0.00 0.00 33.94 3.46
3401 5362 4.431416 TTACTGAAAAGGCTGTCTTCCA 57.569 40.909 0.00 0.00 33.94 3.53
3402 5363 3.515602 ACTGAAAAGGCTGTCTTCCAT 57.484 42.857 0.00 0.00 33.94 3.41
3406 5367 3.760151 TGAAAAGGCTGTCTTCCATCATG 59.240 43.478 0.00 0.00 33.94 3.07
3410 5387 1.065199 GGCTGTCTTCCATCATGGTGA 60.065 52.381 7.78 0.65 39.03 4.02
3474 5451 0.329596 ACAAAGGAGCTCATGGGACC 59.670 55.000 17.19 0.00 0.00 4.46
3475 5452 0.329261 CAAAGGAGCTCATGGGACCA 59.671 55.000 17.19 0.00 0.00 4.02
3476 5453 1.075601 AAAGGAGCTCATGGGACCAA 58.924 50.000 17.19 0.00 0.00 3.67
3477 5454 1.075601 AAGGAGCTCATGGGACCAAA 58.924 50.000 17.19 0.00 0.00 3.28
3478 5455 1.075601 AGGAGCTCATGGGACCAAAA 58.924 50.000 17.19 0.00 0.00 2.44
3479 5456 1.005215 AGGAGCTCATGGGACCAAAAG 59.995 52.381 17.19 0.00 0.00 2.27
3480 5457 1.272147 GGAGCTCATGGGACCAAAAGT 60.272 52.381 17.19 0.00 0.00 2.66
3481 5458 2.087646 GAGCTCATGGGACCAAAAGTC 58.912 52.381 9.40 0.00 45.51 3.01
3490 5467 0.586802 GACCAAAAGTCGACACAGGC 59.413 55.000 19.50 0.00 35.30 4.85
3491 5468 0.180406 ACCAAAAGTCGACACAGGCT 59.820 50.000 19.50 0.00 0.00 4.58
3492 5469 0.588252 CCAAAAGTCGACACAGGCTG 59.412 55.000 19.50 14.16 0.00 4.85
3493 5470 0.040958 CAAAAGTCGACACAGGCTGC 60.041 55.000 19.50 0.00 0.00 5.25
3494 5471 0.179045 AAAAGTCGACACAGGCTGCT 60.179 50.000 19.50 0.00 0.00 4.24
3495 5472 0.679505 AAAGTCGACACAGGCTGCTA 59.320 50.000 19.50 0.00 0.00 3.49
3496 5473 0.244994 AAGTCGACACAGGCTGCTAG 59.755 55.000 19.50 7.56 0.00 3.42
3497 5474 0.609406 AGTCGACACAGGCTGCTAGA 60.609 55.000 19.50 6.44 0.00 2.43
3498 5475 0.243907 GTCGACACAGGCTGCTAGAA 59.756 55.000 15.89 0.00 0.00 2.10
3499 5476 1.134965 GTCGACACAGGCTGCTAGAAT 60.135 52.381 15.89 0.00 0.00 2.40
3500 5477 1.134995 TCGACACAGGCTGCTAGAATG 60.135 52.381 15.89 6.71 0.00 2.67
3501 5478 1.661341 GACACAGGCTGCTAGAATGG 58.339 55.000 15.89 0.00 0.00 3.16
3502 5479 1.208052 GACACAGGCTGCTAGAATGGA 59.792 52.381 15.89 0.00 0.00 3.41
3503 5480 1.842562 ACACAGGCTGCTAGAATGGAT 59.157 47.619 15.89 0.00 0.00 3.41
3504 5481 3.041211 ACACAGGCTGCTAGAATGGATA 58.959 45.455 15.89 0.00 0.00 2.59
3505 5482 3.455910 ACACAGGCTGCTAGAATGGATAA 59.544 43.478 15.89 0.00 0.00 1.75
3506 5483 4.103785 ACACAGGCTGCTAGAATGGATAAT 59.896 41.667 15.89 0.00 0.00 1.28
3507 5484 4.454847 CACAGGCTGCTAGAATGGATAATG 59.545 45.833 15.89 0.00 0.00 1.90
3508 5485 4.103785 ACAGGCTGCTAGAATGGATAATGT 59.896 41.667 15.89 0.00 0.00 2.71
3509 5486 5.068636 CAGGCTGCTAGAATGGATAATGTT 58.931 41.667 0.00 0.00 0.00 2.71
3510 5487 5.533903 CAGGCTGCTAGAATGGATAATGTTT 59.466 40.000 0.00 0.00 0.00 2.83
3511 5488 5.533903 AGGCTGCTAGAATGGATAATGTTTG 59.466 40.000 0.00 0.00 0.00 2.93
3512 5489 5.218139 GCTGCTAGAATGGATAATGTTTGC 58.782 41.667 0.00 0.00 0.00 3.68
3513 5490 5.766222 CTGCTAGAATGGATAATGTTTGCC 58.234 41.667 0.00 0.00 0.00 4.52
3514 5491 4.584325 TGCTAGAATGGATAATGTTTGCCC 59.416 41.667 0.00 0.00 0.00 5.36
3515 5492 4.829492 GCTAGAATGGATAATGTTTGCCCT 59.171 41.667 0.00 0.00 0.00 5.19
3516 5493 5.302823 GCTAGAATGGATAATGTTTGCCCTT 59.697 40.000 0.00 0.00 0.00 3.95
3517 5494 5.859205 AGAATGGATAATGTTTGCCCTTC 57.141 39.130 0.00 0.00 0.00 3.46
3518 5495 4.339247 AGAATGGATAATGTTTGCCCTTCG 59.661 41.667 0.00 0.00 32.49 3.79
3519 5496 2.374184 TGGATAATGTTTGCCCTTCGG 58.626 47.619 0.00 0.00 0.00 4.30
3520 5497 2.025793 TGGATAATGTTTGCCCTTCGGA 60.026 45.455 0.00 0.00 0.00 4.55
3521 5498 3.222603 GGATAATGTTTGCCCTTCGGAT 58.777 45.455 0.00 0.00 0.00 4.18
3522 5499 3.636764 GGATAATGTTTGCCCTTCGGATT 59.363 43.478 0.00 0.00 0.00 3.01
3523 5500 4.825085 GGATAATGTTTGCCCTTCGGATTA 59.175 41.667 0.00 0.00 0.00 1.75
3524 5501 5.300792 GGATAATGTTTGCCCTTCGGATTAA 59.699 40.000 0.00 0.00 0.00 1.40
3525 5502 4.718940 AATGTTTGCCCTTCGGATTAAG 57.281 40.909 0.00 0.00 0.00 1.85
3526 5503 1.816224 TGTTTGCCCTTCGGATTAAGC 59.184 47.619 0.00 0.00 0.00 3.09
3527 5504 2.092323 GTTTGCCCTTCGGATTAAGCT 58.908 47.619 0.00 0.00 0.00 3.74
3528 5505 2.492088 GTTTGCCCTTCGGATTAAGCTT 59.508 45.455 3.48 3.48 0.00 3.74
3529 5506 3.637911 TTGCCCTTCGGATTAAGCTTA 57.362 42.857 0.86 0.86 0.00 3.09
3530 5507 3.637911 TGCCCTTCGGATTAAGCTTAA 57.362 42.857 20.71 20.71 0.00 1.85
3531 5508 4.164843 TGCCCTTCGGATTAAGCTTAAT 57.835 40.909 27.73 27.73 36.14 1.40
3532 5509 4.532834 TGCCCTTCGGATTAAGCTTAATT 58.467 39.130 27.96 14.84 33.72 1.40
3533 5510 4.578928 TGCCCTTCGGATTAAGCTTAATTC 59.421 41.667 27.96 25.36 33.72 2.17
3534 5511 4.822350 GCCCTTCGGATTAAGCTTAATTCT 59.178 41.667 27.96 11.33 33.72 2.40
3535 5512 5.049336 GCCCTTCGGATTAAGCTTAATTCTC 60.049 44.000 27.96 18.28 33.72 2.87
3536 5513 6.292150 CCCTTCGGATTAAGCTTAATTCTCT 58.708 40.000 27.96 10.63 33.72 3.10
3537 5514 6.768381 CCCTTCGGATTAAGCTTAATTCTCTT 59.232 38.462 27.96 9.94 33.72 2.85
3538 5515 7.931948 CCCTTCGGATTAAGCTTAATTCTCTTA 59.068 37.037 27.96 12.10 33.72 2.10
3539 5516 8.766151 CCTTCGGATTAAGCTTAATTCTCTTAC 58.234 37.037 27.96 15.52 33.72 2.34
3540 5517 9.314321 CTTCGGATTAAGCTTAATTCTCTTACA 57.686 33.333 27.96 9.12 33.72 2.41
3541 5518 9.661563 TTCGGATTAAGCTTAATTCTCTTACAA 57.338 29.630 27.96 11.80 33.72 2.41
3542 5519 9.661563 TCGGATTAAGCTTAATTCTCTTACAAA 57.338 29.630 27.96 2.76 33.72 2.83
3543 5520 9.922305 CGGATTAAGCTTAATTCTCTTACAAAG 57.078 33.333 27.96 10.06 33.72 2.77
3547 5524 6.993786 AGCTTAATTCTCTTACAAAGGAGC 57.006 37.500 0.00 0.00 0.00 4.70
3548 5525 6.716284 AGCTTAATTCTCTTACAAAGGAGCT 58.284 36.000 0.00 0.00 0.00 4.09
3549 5526 6.597280 AGCTTAATTCTCTTACAAAGGAGCTG 59.403 38.462 0.00 0.00 0.00 4.24
3550 5527 6.595716 GCTTAATTCTCTTACAAAGGAGCTGA 59.404 38.462 0.00 0.00 0.00 4.26
3551 5528 7.413548 GCTTAATTCTCTTACAAAGGAGCTGAC 60.414 40.741 0.00 0.00 0.00 3.51
3569 5546 3.027974 GACTAAAAGTCGACACAGGCT 57.972 47.619 19.50 0.00 35.28 4.58
3578 5555 1.002868 GACACAGGCTGATGCTGGT 60.003 57.895 23.66 8.77 39.59 4.00
3593 5570 2.086869 GCTGGTAGCATTTCTGAGCAA 58.913 47.619 0.00 0.00 41.89 3.91
3595 5572 3.671702 GCTGGTAGCATTTCTGAGCAAAC 60.672 47.826 0.00 0.00 41.89 2.93
3597 5574 3.084786 GGTAGCATTTCTGAGCAAACCT 58.915 45.455 0.00 0.00 36.62 3.50
3607 5584 7.611213 TTTCTGAGCAAACCTATAGCTTTAC 57.389 36.000 0.00 0.00 39.02 2.01
3632 5609 9.544579 ACTTTCTAGGTATAAACACTACTTCCT 57.455 33.333 0.00 0.00 0.00 3.36
3634 5611 9.765295 TTTCTAGGTATAAACACTACTTCCTCT 57.235 33.333 0.00 0.00 0.00 3.69
3635 5612 8.749026 TCTAGGTATAAACACTACTTCCTCTG 57.251 38.462 0.00 0.00 0.00 3.35
3636 5613 8.334734 TCTAGGTATAAACACTACTTCCTCTGT 58.665 37.037 0.00 0.00 0.00 3.41
3637 5614 7.407393 AGGTATAAACACTACTTCCTCTGTC 57.593 40.000 0.00 0.00 0.00 3.51
3638 5615 6.380560 AGGTATAAACACTACTTCCTCTGTCC 59.619 42.308 0.00 0.00 0.00 4.02
3639 5616 3.662247 AAACACTACTTCCTCTGTCCG 57.338 47.619 0.00 0.00 0.00 4.79
3640 5617 2.581216 ACACTACTTCCTCTGTCCGA 57.419 50.000 0.00 0.00 0.00 4.55
3641 5618 2.872732 ACACTACTTCCTCTGTCCGAA 58.127 47.619 0.00 0.00 0.00 4.30
3642 5619 3.228453 ACACTACTTCCTCTGTCCGAAA 58.772 45.455 0.00 0.00 0.00 3.46
3643 5620 3.640029 ACACTACTTCCTCTGTCCGAAAA 59.360 43.478 0.00 0.00 0.00 2.29
3644 5621 4.100498 ACACTACTTCCTCTGTCCGAAAAA 59.900 41.667 0.00 0.00 0.00 1.94
3645 5622 5.221661 ACACTACTTCCTCTGTCCGAAAAAT 60.222 40.000 0.00 0.00 0.00 1.82
3646 5623 5.348997 CACTACTTCCTCTGTCCGAAAAATC 59.651 44.000 0.00 0.00 0.00 2.17
3647 5624 4.625607 ACTTCCTCTGTCCGAAAAATCT 57.374 40.909 0.00 0.00 0.00 2.40
3648 5625 4.974399 ACTTCCTCTGTCCGAAAAATCTT 58.026 39.130 0.00 0.00 0.00 2.40
3649 5626 4.757149 ACTTCCTCTGTCCGAAAAATCTTG 59.243 41.667 0.00 0.00 0.00 3.02
3650 5627 4.351874 TCCTCTGTCCGAAAAATCTTGT 57.648 40.909 0.00 0.00 0.00 3.16
3651 5628 4.315803 TCCTCTGTCCGAAAAATCTTGTC 58.684 43.478 0.00 0.00 0.00 3.18
3652 5629 3.437049 CCTCTGTCCGAAAAATCTTGTCC 59.563 47.826 0.00 0.00 0.00 4.02
3653 5630 3.064207 TCTGTCCGAAAAATCTTGTCCG 58.936 45.455 0.00 0.00 0.00 4.79
3654 5631 3.064207 CTGTCCGAAAAATCTTGTCCGA 58.936 45.455 0.00 0.00 0.00 4.55
3655 5632 3.670625 TGTCCGAAAAATCTTGTCCGAT 58.329 40.909 0.00 0.00 0.00 4.18
3656 5633 3.435327 TGTCCGAAAAATCTTGTCCGATG 59.565 43.478 0.00 0.00 0.00 3.84
3657 5634 3.435671 GTCCGAAAAATCTTGTCCGATGT 59.564 43.478 0.00 0.00 0.00 3.06
3658 5635 4.628333 GTCCGAAAAATCTTGTCCGATGTA 59.372 41.667 0.00 0.00 0.00 2.29
3659 5636 5.293569 GTCCGAAAAATCTTGTCCGATGTAT 59.706 40.000 0.00 0.00 0.00 2.29
3660 5637 5.522460 TCCGAAAAATCTTGTCCGATGTATC 59.478 40.000 0.00 0.00 0.00 2.24
3661 5638 5.523916 CCGAAAAATCTTGTCCGATGTATCT 59.476 40.000 0.00 0.00 0.00 1.98
3662 5639 6.700081 CCGAAAAATCTTGTCCGATGTATCTA 59.300 38.462 0.00 0.00 0.00 1.98
3663 5640 7.096023 CCGAAAAATCTTGTCCGATGTATCTAG 60.096 40.741 0.00 0.00 0.00 2.43
3664 5641 7.484035 AAAAATCTTGTCCGATGTATCTAGC 57.516 36.000 0.00 0.00 0.00 3.42
3665 5642 5.791336 AATCTTGTCCGATGTATCTAGCA 57.209 39.130 0.00 0.00 0.00 3.49
3666 5643 5.791336 ATCTTGTCCGATGTATCTAGCAA 57.209 39.130 0.00 0.00 0.00 3.91
3667 5644 5.791336 TCTTGTCCGATGTATCTAGCAAT 57.209 39.130 0.00 0.00 0.00 3.56
3668 5645 6.894339 TCTTGTCCGATGTATCTAGCAATA 57.106 37.500 0.00 0.00 0.00 1.90
3669 5646 7.284919 TCTTGTCCGATGTATCTAGCAATAA 57.715 36.000 0.00 0.00 0.00 1.40
3670 5647 7.145985 TCTTGTCCGATGTATCTAGCAATAAC 58.854 38.462 0.00 0.00 0.00 1.89
3671 5648 6.650427 TGTCCGATGTATCTAGCAATAACT 57.350 37.500 0.00 0.00 0.00 2.24
3672 5649 7.050970 TGTCCGATGTATCTAGCAATAACTT 57.949 36.000 0.00 0.00 0.00 2.66
3673 5650 7.145985 TGTCCGATGTATCTAGCAATAACTTC 58.854 38.462 0.00 0.00 0.00 3.01
3674 5651 6.305877 GTCCGATGTATCTAGCAATAACTTCG 59.694 42.308 0.00 0.00 0.00 3.79
3675 5652 6.016527 TCCGATGTATCTAGCAATAACTTCGT 60.017 38.462 0.00 0.00 0.00 3.85
3676 5653 6.088217 CCGATGTATCTAGCAATAACTTCGTG 59.912 42.308 0.00 0.00 0.00 4.35
3677 5654 6.637254 CGATGTATCTAGCAATAACTTCGTGT 59.363 38.462 0.00 0.00 0.00 4.49
3678 5655 7.167635 CGATGTATCTAGCAATAACTTCGTGTT 59.832 37.037 0.00 2.66 42.31 3.32
3679 5656 9.459640 GATGTATCTAGCAATAACTTCGTGTTA 57.540 33.333 6.32 6.32 44.22 2.41
3680 5657 8.851960 TGTATCTAGCAATAACTTCGTGTTAG 57.148 34.615 8.96 0.00 43.46 2.34
3681 5658 8.680001 TGTATCTAGCAATAACTTCGTGTTAGA 58.320 33.333 8.96 0.00 43.46 2.10
3682 5659 9.680315 GTATCTAGCAATAACTTCGTGTTAGAT 57.320 33.333 12.05 12.05 43.71 1.98
3684 5661 9.680315 ATCTAGCAATAACTTCGTGTTAGATAC 57.320 33.333 7.28 0.00 41.30 2.24
3685 5662 8.680001 TCTAGCAATAACTTCGTGTTAGATACA 58.320 33.333 8.96 0.00 43.46 2.29
3686 5663 9.464714 CTAGCAATAACTTCGTGTTAGATACAT 57.535 33.333 8.96 0.00 43.46 2.29
3687 5664 8.354011 AGCAATAACTTCGTGTTAGATACATC 57.646 34.615 8.96 0.00 43.46 3.06
3688 5665 7.438459 AGCAATAACTTCGTGTTAGATACATCC 59.562 37.037 8.96 0.00 43.46 3.51
3689 5666 7.223971 GCAATAACTTCGTGTTAGATACATCCA 59.776 37.037 8.96 0.00 43.46 3.41
3690 5667 9.261180 CAATAACTTCGTGTTAGATACATCCAT 57.739 33.333 8.96 0.00 43.46 3.41
3691 5668 9.832445 AATAACTTCGTGTTAGATACATCCATT 57.168 29.630 8.96 0.00 43.46 3.16
3692 5669 9.832445 ATAACTTCGTGTTAGATACATCCATTT 57.168 29.630 8.96 0.00 43.46 2.32
3693 5670 7.539712 ACTTCGTGTTAGATACATCCATTTG 57.460 36.000 0.00 0.00 39.39 2.32
3694 5671 7.327975 ACTTCGTGTTAGATACATCCATTTGA 58.672 34.615 0.00 0.00 39.39 2.69
3695 5672 7.492669 ACTTCGTGTTAGATACATCCATTTGAG 59.507 37.037 0.00 0.00 39.39 3.02
3696 5673 6.280643 TCGTGTTAGATACATCCATTTGAGG 58.719 40.000 0.00 0.00 39.39 3.86
3697 5674 6.097696 TCGTGTTAGATACATCCATTTGAGGA 59.902 38.462 0.00 0.00 43.01 3.71
3698 5675 6.761242 CGTGTTAGATACATCCATTTGAGGAA 59.239 38.462 0.00 0.00 41.92 3.36
3699 5676 7.254455 CGTGTTAGATACATCCATTTGAGGAAC 60.254 40.741 0.00 0.00 41.92 3.62
3700 5677 7.552687 GTGTTAGATACATCCATTTGAGGAACA 59.447 37.037 0.00 0.00 41.92 3.18
3701 5678 8.106462 TGTTAGATACATCCATTTGAGGAACAA 58.894 33.333 0.00 0.00 41.92 2.83
3702 5679 8.616076 GTTAGATACATCCATTTGAGGAACAAG 58.384 37.037 0.00 0.00 41.92 3.16
3703 5680 6.125029 AGATACATCCATTTGAGGAACAAGG 58.875 40.000 0.00 0.00 41.92 3.61
3704 5681 4.118168 ACATCCATTTGAGGAACAAGGT 57.882 40.909 0.00 0.00 41.92 3.50
3705 5682 4.482990 ACATCCATTTGAGGAACAAGGTT 58.517 39.130 0.00 0.00 41.92 3.50
3706 5683 4.281688 ACATCCATTTGAGGAACAAGGTTG 59.718 41.667 0.00 0.00 41.92 3.77
3707 5684 3.230134 TCCATTTGAGGAACAAGGTTGG 58.770 45.455 0.00 0.00 39.77 3.77
3708 5685 2.299867 CCATTTGAGGAACAAGGTTGGG 59.700 50.000 0.00 0.00 39.77 4.12
3709 5686 3.230134 CATTTGAGGAACAAGGTTGGGA 58.770 45.455 0.00 0.00 39.77 4.37
3710 5687 2.358322 TTGAGGAACAAGGTTGGGAC 57.642 50.000 0.00 0.00 34.20 4.46
3711 5688 1.217916 TGAGGAACAAGGTTGGGACA 58.782 50.000 0.00 0.00 0.00 4.02
3712 5689 2.024846 TTGAGGAACAAGGTTGGGACAA 60.025 45.455 0.00 0.00 37.48 3.18
3713 5690 3.564571 TTGAGGAACAAGGTTGGGACAAA 60.565 43.478 0.00 0.00 37.48 2.83
3714 5691 5.651632 TTGAGGAACAAGGTTGGGACAAAC 61.652 45.833 0.00 0.00 37.48 2.93
3715 5692 7.809906 TTGAGGAACAAGGTTGGGACAAACT 62.810 44.000 0.00 0.00 37.48 2.66
3725 5702 1.671845 TGGGACAAACTTTTTCGGACG 59.328 47.619 0.00 0.00 31.92 4.79
3726 5703 1.002142 GGGACAAACTTTTTCGGACGG 60.002 52.381 0.00 0.00 0.00 4.79
3727 5704 1.941975 GGACAAACTTTTTCGGACGGA 59.058 47.619 0.00 0.00 0.00 4.69
3728 5705 2.551032 GGACAAACTTTTTCGGACGGAT 59.449 45.455 0.00 0.00 0.00 4.18
3729 5706 3.551551 GACAAACTTTTTCGGACGGATG 58.448 45.455 0.00 0.00 0.00 3.51
3730 5707 2.287368 ACAAACTTTTTCGGACGGATGC 60.287 45.455 0.00 0.00 0.00 3.91
3731 5708 1.600023 AACTTTTTCGGACGGATGCA 58.400 45.000 0.00 0.00 0.00 3.96
3732 5709 1.156736 ACTTTTTCGGACGGATGCAG 58.843 50.000 0.00 0.00 0.00 4.41
3733 5710 1.156736 CTTTTTCGGACGGATGCAGT 58.843 50.000 0.00 0.00 0.00 4.40
3734 5711 2.289195 ACTTTTTCGGACGGATGCAGTA 60.289 45.455 0.00 0.00 0.00 2.74
3735 5712 2.684001 TTTTCGGACGGATGCAGTAT 57.316 45.000 0.00 0.00 0.00 2.12
3736 5713 2.684001 TTTCGGACGGATGCAGTATT 57.316 45.000 0.00 0.00 0.00 1.89
3737 5714 3.804786 TTTCGGACGGATGCAGTATTA 57.195 42.857 0.00 0.00 0.00 0.98
3738 5715 4.330944 TTTCGGACGGATGCAGTATTAT 57.669 40.909 0.00 0.00 0.00 1.28
3739 5716 3.297830 TCGGACGGATGCAGTATTATG 57.702 47.619 0.00 0.00 0.00 1.90
3740 5717 1.726791 CGGACGGATGCAGTATTATGC 59.273 52.381 0.00 0.00 46.68 3.14
3758 5735 1.913317 GCAAGGGCATCTTTAAAGCG 58.087 50.000 10.51 5.33 40.72 4.68
3759 5736 1.469767 GCAAGGGCATCTTTAAAGCGG 60.470 52.381 10.51 6.02 40.72 5.52
3760 5737 2.091541 CAAGGGCATCTTTAAAGCGGA 58.908 47.619 10.51 0.00 32.41 5.54
3761 5738 1.751437 AGGGCATCTTTAAAGCGGAC 58.249 50.000 10.51 6.78 0.00 4.79
3762 5739 0.738975 GGGCATCTTTAAAGCGGACC 59.261 55.000 10.51 12.01 0.00 4.46
3763 5740 0.738975 GGCATCTTTAAAGCGGACCC 59.261 55.000 10.51 2.99 0.00 4.46
3764 5741 1.682087 GGCATCTTTAAAGCGGACCCT 60.682 52.381 10.51 0.00 0.00 4.34
3765 5742 2.092323 GCATCTTTAAAGCGGACCCTT 58.908 47.619 10.51 0.00 0.00 3.95
3766 5743 3.275999 GCATCTTTAAAGCGGACCCTTA 58.724 45.455 10.51 0.00 0.00 2.69
3767 5744 3.692593 GCATCTTTAAAGCGGACCCTTAA 59.307 43.478 10.51 0.00 0.00 1.85
3768 5745 4.157105 GCATCTTTAAAGCGGACCCTTAAA 59.843 41.667 10.51 0.00 0.00 1.52
3769 5746 5.676331 GCATCTTTAAAGCGGACCCTTAAAG 60.676 44.000 10.51 15.65 0.00 1.85
3770 5747 4.976864 TCTTTAAAGCGGACCCTTAAAGT 58.023 39.130 10.51 1.45 0.00 2.66
3771 5748 4.758165 TCTTTAAAGCGGACCCTTAAAGTG 59.242 41.667 10.51 5.35 0.00 3.16
3772 5749 1.244816 AAAGCGGACCCTTAAAGTGC 58.755 50.000 0.00 0.00 0.00 4.40
3773 5750 0.608308 AAGCGGACCCTTAAAGTGCC 60.608 55.000 0.00 0.00 0.00 5.01
3774 5751 2.044555 GCGGACCCTTAAAGTGCCC 61.045 63.158 0.00 0.00 0.00 5.36
3775 5752 1.377229 CGGACCCTTAAAGTGCCCA 59.623 57.895 0.00 0.00 0.00 5.36
3776 5753 0.034477 CGGACCCTTAAAGTGCCCAT 60.034 55.000 0.00 0.00 0.00 4.00
3777 5754 1.210967 CGGACCCTTAAAGTGCCCATA 59.789 52.381 0.00 0.00 0.00 2.74
3778 5755 2.158667 CGGACCCTTAAAGTGCCCATAT 60.159 50.000 0.00 0.00 0.00 1.78
3779 5756 3.487372 GGACCCTTAAAGTGCCCATATC 58.513 50.000 0.00 0.00 0.00 1.63
3780 5757 3.487372 GACCCTTAAAGTGCCCATATCC 58.513 50.000 0.00 0.00 0.00 2.59
3781 5758 2.177016 ACCCTTAAAGTGCCCATATCCC 59.823 50.000 0.00 0.00 0.00 3.85
3782 5759 2.447047 CCCTTAAAGTGCCCATATCCCT 59.553 50.000 0.00 0.00 0.00 4.20
3783 5760 3.498661 CCCTTAAAGTGCCCATATCCCTC 60.499 52.174 0.00 0.00 0.00 4.30
3784 5761 3.498661 CCTTAAAGTGCCCATATCCCTCC 60.499 52.174 0.00 0.00 0.00 4.30
3785 5762 0.474184 AAAGTGCCCATATCCCTCCG 59.526 55.000 0.00 0.00 0.00 4.63
3786 5763 1.418908 AAGTGCCCATATCCCTCCGG 61.419 60.000 0.00 0.00 0.00 5.14
3787 5764 1.841556 GTGCCCATATCCCTCCGGA 60.842 63.158 2.93 2.93 44.33 5.14
3789 5766 0.909610 TGCCCATATCCCTCCGGATC 60.910 60.000 3.57 0.00 46.77 3.36
3790 5767 0.909610 GCCCATATCCCTCCGGATCA 60.910 60.000 3.57 0.00 46.77 2.92
3791 5768 1.885049 CCCATATCCCTCCGGATCAT 58.115 55.000 3.57 0.00 46.77 2.45
3792 5769 1.487976 CCCATATCCCTCCGGATCATG 59.512 57.143 3.57 4.33 46.77 3.07
3793 5770 1.134280 CCATATCCCTCCGGATCATGC 60.134 57.143 3.57 0.00 46.77 4.06
3794 5771 1.556451 CATATCCCTCCGGATCATGCA 59.444 52.381 3.57 0.00 46.77 3.96
3795 5772 1.269958 TATCCCTCCGGATCATGCAG 58.730 55.000 3.57 0.00 46.77 4.41
3796 5773 2.121992 ATCCCTCCGGATCATGCAGC 62.122 60.000 3.57 0.00 46.77 5.25
3797 5774 2.281345 CCTCCGGATCATGCAGCC 60.281 66.667 3.57 0.00 0.00 4.85
3798 5775 2.281345 CTCCGGATCATGCAGCCC 60.281 66.667 3.57 0.00 0.00 5.19
3799 5776 4.240103 TCCGGATCATGCAGCCCG 62.240 66.667 0.00 10.64 41.47 6.13
3801 5778 4.240103 CGGATCATGCAGCCCGGA 62.240 66.667 0.73 0.00 38.42 5.14
3802 5779 2.433446 GGATCATGCAGCCCGGAT 59.567 61.111 0.73 0.00 0.00 4.18
3803 5780 1.970114 GGATCATGCAGCCCGGATG 60.970 63.158 0.73 1.84 44.44 3.51
3804 5781 1.228063 GATCATGCAGCCCGGATGT 60.228 57.895 0.73 0.00 43.57 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.006102 CACGTGCTCGAAGGGAACT 60.006 57.895 16.04 0.00 41.26 3.01
10 11 2.805353 CGGGTCACGTGCTCGAAG 60.805 66.667 22.26 7.09 40.62 3.79
90 91 4.007644 CTGGGTGCAGCCGAGACA 62.008 66.667 28.67 10.99 44.79 3.41
111 112 7.974504 TCAAGTTCTATTAAACCTCCTCAGTT 58.025 34.615 0.00 0.00 0.00 3.16
119 120 5.940470 CACTGGCTCAAGTTCTATTAAACCT 59.060 40.000 0.00 0.00 0.00 3.50
259 261 1.885233 TGCAACATTCGGCAGAAATGA 59.115 42.857 2.68 0.00 40.15 2.57
295 297 1.294659 GACAGGAAAGGTGCGCTCAG 61.295 60.000 9.73 0.00 0.00 3.35
300 302 1.608590 ACATTTGACAGGAAAGGTGCG 59.391 47.619 0.00 0.00 29.10 5.34
315 317 3.383620 TTTCAGGCGATTGCAACATTT 57.616 38.095 0.00 0.00 45.35 2.32
327 329 3.038017 CGCAAACATGATATTTCAGGCG 58.962 45.455 0.00 0.00 37.15 5.52
358 361 4.155644 GGGAGCAAAATAGATAGCAGATGC 59.844 45.833 0.00 0.00 42.49 3.91
389 545 4.732938 GCAAGCATGCTCTGGAAGATAAAC 60.733 45.833 22.93 2.36 45.62 2.01
422 578 5.106634 CCAGCTAGCATTCTCATATCTTTGC 60.107 44.000 18.83 0.00 0.00 3.68
450 606 5.110598 TGAACTAACAAGCGAACACTAACA 58.889 37.500 0.00 0.00 0.00 2.41
453 609 7.095523 GGTTAATGAACTAACAAGCGAACACTA 60.096 37.037 0.00 0.00 35.74 2.74
454 610 6.293244 GGTTAATGAACTAACAAGCGAACACT 60.293 38.462 0.00 0.00 35.74 3.55
461 617 6.206829 AGAGTTGGGTTAATGAACTAACAAGC 59.793 38.462 12.90 5.45 36.21 4.01
469 625 5.181433 GGAGTGAAGAGTTGGGTTAATGAAC 59.819 44.000 0.00 0.00 34.56 3.18
471 627 4.349636 TGGAGTGAAGAGTTGGGTTAATGA 59.650 41.667 0.00 0.00 0.00 2.57
472 628 4.651778 TGGAGTGAAGAGTTGGGTTAATG 58.348 43.478 0.00 0.00 0.00 1.90
476 632 3.117512 ACATTGGAGTGAAGAGTTGGGTT 60.118 43.478 0.00 0.00 0.00 4.11
478 634 3.146104 ACATTGGAGTGAAGAGTTGGG 57.854 47.619 0.00 0.00 0.00 4.12
480 636 5.991606 TCAACTACATTGGAGTGAAGAGTTG 59.008 40.000 1.30 0.00 42.37 3.16
502 658 2.160022 GCAACCGGTAATAGCGTTTTCA 59.840 45.455 8.00 0.00 37.40 2.69
512 668 2.263153 GCAAGTGGCAACCGGTAAT 58.737 52.632 8.00 0.00 43.97 1.89
522 678 5.316987 AGTAATAGGGAATATGCAAGTGGC 58.683 41.667 0.00 0.00 45.13 5.01
523 679 6.652481 CAGAGTAATAGGGAATATGCAAGTGG 59.348 42.308 0.00 0.00 0.00 4.00
524 680 7.445121 TCAGAGTAATAGGGAATATGCAAGTG 58.555 38.462 0.00 0.00 0.00 3.16
528 684 8.708378 CCATATCAGAGTAATAGGGAATATGCA 58.292 37.037 0.00 0.00 33.38 3.96
529 685 8.928448 TCCATATCAGAGTAATAGGGAATATGC 58.072 37.037 0.00 0.00 36.80 3.14
545 701 9.837681 TCCCTATGTTTTATACTCCATATCAGA 57.162 33.333 0.00 0.00 0.00 3.27
547 703 9.615660 ACTCCCTATGTTTTATACTCCATATCA 57.384 33.333 0.00 0.00 0.00 2.15
609 986 4.113354 GGCAATTTTTGTAACACGGTGAA 58.887 39.130 16.29 0.00 0.00 3.18
610 987 3.491104 GGGCAATTTTTGTAACACGGTGA 60.491 43.478 16.29 0.00 0.00 4.02
613 990 2.409012 GGGGCAATTTTTGTAACACGG 58.591 47.619 0.00 0.00 0.00 4.94
615 992 3.100658 ACGGGGCAATTTTTGTAACAC 57.899 42.857 0.00 0.00 0.00 3.32
619 996 5.010933 TGAGAATACGGGGCAATTTTTGTA 58.989 37.500 0.00 0.00 0.00 2.41
622 999 4.082245 CAGTGAGAATACGGGGCAATTTTT 60.082 41.667 0.00 0.00 0.00 1.94
623 1000 3.443681 CAGTGAGAATACGGGGCAATTTT 59.556 43.478 0.00 0.00 0.00 1.82
624 1001 3.016736 CAGTGAGAATACGGGGCAATTT 58.983 45.455 0.00 0.00 0.00 1.82
625 1002 2.026262 ACAGTGAGAATACGGGGCAATT 60.026 45.455 0.00 0.00 0.00 2.32
626 1003 1.559682 ACAGTGAGAATACGGGGCAAT 59.440 47.619 0.00 0.00 0.00 3.56
627 1004 0.981183 ACAGTGAGAATACGGGGCAA 59.019 50.000 0.00 0.00 0.00 4.52
628 1005 0.535335 GACAGTGAGAATACGGGGCA 59.465 55.000 0.00 0.00 0.00 5.36
629 1006 0.535335 TGACAGTGAGAATACGGGGC 59.465 55.000 0.00 0.00 0.00 5.80
630 1007 1.137086 CCTGACAGTGAGAATACGGGG 59.863 57.143 0.00 0.00 0.00 5.73
631 1008 1.825474 ACCTGACAGTGAGAATACGGG 59.175 52.381 0.00 0.00 0.00 5.28
632 1009 4.920640 ATACCTGACAGTGAGAATACGG 57.079 45.455 0.00 0.00 0.00 4.02
633 1010 9.395707 GTAATAATACCTGACAGTGAGAATACG 57.604 37.037 0.00 0.00 0.00 3.06
640 1017 9.787435 AGTTTTTGTAATAATACCTGACAGTGA 57.213 29.630 0.00 0.00 0.00 3.41
641 1018 9.825972 CAGTTTTTGTAATAATACCTGACAGTG 57.174 33.333 0.93 0.00 0.00 3.66
642 1019 9.787435 TCAGTTTTTGTAATAATACCTGACAGT 57.213 29.630 0.93 0.00 0.00 3.55
644 1021 9.005777 GGTCAGTTTTTGTAATAATACCTGACA 57.994 33.333 18.20 0.00 42.23 3.58
645 1022 8.456471 GGGTCAGTTTTTGTAATAATACCTGAC 58.544 37.037 12.37 12.37 41.09 3.51
646 1023 7.334921 CGGGTCAGTTTTTGTAATAATACCTGA 59.665 37.037 0.00 0.00 32.51 3.86
647 1024 7.120138 ACGGGTCAGTTTTTGTAATAATACCTG 59.880 37.037 0.00 0.00 36.06 4.00
648 1025 7.170277 ACGGGTCAGTTTTTGTAATAATACCT 58.830 34.615 0.00 0.00 0.00 3.08
649 1026 7.381766 ACGGGTCAGTTTTTGTAATAATACC 57.618 36.000 0.00 0.00 0.00 2.73
652 1029 9.895138 AGTATACGGGTCAGTTTTTGTAATAAT 57.105 29.630 0.00 0.00 0.00 1.28
653 1030 9.723601 AAGTATACGGGTCAGTTTTTGTAATAA 57.276 29.630 0.00 0.00 0.00 1.40
654 1031 9.153721 CAAGTATACGGGTCAGTTTTTGTAATA 57.846 33.333 0.00 0.00 0.00 0.98
655 1032 7.662669 ACAAGTATACGGGTCAGTTTTTGTAAT 59.337 33.333 0.00 0.00 0.00 1.89
656 1033 6.991531 ACAAGTATACGGGTCAGTTTTTGTAA 59.008 34.615 0.00 0.00 0.00 2.41
665 1043 5.068234 TCAAAGACAAGTATACGGGTCAG 57.932 43.478 23.16 15.70 32.79 3.51
695 1073 5.902613 AAATCCAGATGAATTTTCGCAGA 57.097 34.783 0.00 0.00 0.00 4.26
775 1185 0.393673 GGCCTGCTTTCTCCTTCTCC 60.394 60.000 0.00 0.00 0.00 3.71
802 1212 2.582978 GACCGGCCCAGGTTACTC 59.417 66.667 0.00 0.00 46.09 2.59
806 1218 3.264845 AATGGACCGGCCCAGGTT 61.265 61.111 16.91 2.15 46.09 3.50
987 1407 4.041762 GCCATGGTTGGTCGGGGA 62.042 66.667 14.67 0.00 45.57 4.81
1155 1575 1.497161 CTAGATCGAGGGGTTTGGGT 58.503 55.000 0.00 0.00 0.00 4.51
1157 1577 0.249489 CGCTAGATCGAGGGGTTTGG 60.249 60.000 11.43 0.00 0.00 3.28
1167 1589 0.996229 CGCAAGAGCTCGCTAGATCG 60.996 60.000 8.37 2.90 43.12 3.69
1193 1615 3.126001 TCCATGAGGACAACTGAACAC 57.874 47.619 0.00 0.00 39.61 3.32
1222 1644 1.540580 GCAAATAGGGGACTCGTAGCC 60.541 57.143 0.00 0.00 43.67 3.93
1227 1650 0.815615 GGCAGCAAATAGGGGACTCG 60.816 60.000 0.00 0.00 43.67 4.18
1245 1668 1.331138 CGAGGTAGTTCTAGCGACTGG 59.669 57.143 8.37 0.00 0.00 4.00
1246 1669 1.331138 CCGAGGTAGTTCTAGCGACTG 59.669 57.143 8.37 0.00 0.00 3.51
1247 1670 1.666054 CCGAGGTAGTTCTAGCGACT 58.334 55.000 4.37 4.37 0.00 4.18
1249 1672 0.393402 TGCCGAGGTAGTTCTAGCGA 60.393 55.000 3.86 0.00 0.00 4.93
1297 1720 5.390040 CGATACGAAGCAGATCGACTCTAAT 60.390 44.000 12.57 0.00 45.48 1.73
1314 1737 2.244251 CACTTGCGTTACACGATACGA 58.756 47.619 0.00 0.00 46.05 3.43
1317 1740 2.357327 AGCACTTGCGTTACACGATA 57.643 45.000 0.00 0.00 46.05 2.92
1328 1751 3.758554 TCCCATAGAAAAGAAGCACTTGC 59.241 43.478 0.00 0.00 38.98 4.01
1329 1752 5.649395 TCATCCCATAGAAAAGAAGCACTTG 59.351 40.000 0.00 0.00 38.98 3.16
1331 1754 5.441718 TCATCCCATAGAAAAGAAGCACT 57.558 39.130 0.00 0.00 0.00 4.40
1332 1755 5.649831 AGTTCATCCCATAGAAAAGAAGCAC 59.350 40.000 0.00 0.00 0.00 4.40
1333 1756 5.649395 CAGTTCATCCCATAGAAAAGAAGCA 59.351 40.000 0.00 0.00 0.00 3.91
1335 1758 6.094603 CCACAGTTCATCCCATAGAAAAGAAG 59.905 42.308 0.00 0.00 0.00 2.85
1336 1759 5.945784 CCACAGTTCATCCCATAGAAAAGAA 59.054 40.000 0.00 0.00 0.00 2.52
1338 1761 5.500234 TCCACAGTTCATCCCATAGAAAAG 58.500 41.667 0.00 0.00 0.00 2.27
1339 1762 5.512942 TCCACAGTTCATCCCATAGAAAA 57.487 39.130 0.00 0.00 0.00 2.29
1345 1794 3.010472 TCACATTCCACAGTTCATCCCAT 59.990 43.478 0.00 0.00 0.00 4.00
1348 1797 3.181493 GCATCACATTCCACAGTTCATCC 60.181 47.826 0.00 0.00 0.00 3.51
1455 1904 0.309922 GGTTCTCGATGGCGACGATA 59.690 55.000 0.00 0.00 42.51 2.92
1515 1964 4.295119 AACTTGAGGACGGCGCGT 62.295 61.111 6.90 2.29 45.10 6.01
1581 2030 1.133513 TGCATCTGGTTGGTGAAGGTT 60.134 47.619 0.00 0.00 0.00 3.50
1650 2099 2.818751 AAAAACTCACCTGGTGGTCA 57.181 45.000 25.67 6.76 46.60 4.02
1668 2117 2.298729 GGAGTAGTTTGGCATGGCAAAA 59.701 45.455 39.16 26.65 0.00 2.44
1701 2150 6.403964 CCACATCTAACGCACACTACTAGTAA 60.404 42.308 3.76 0.00 0.00 2.24
1740 2189 3.992943 ATCCAACAGATTAACGACCCA 57.007 42.857 0.00 0.00 0.00 4.51
1844 2293 0.764271 TTGCTGGGATGCCGATATCA 59.236 50.000 3.12 0.00 0.00 2.15
1946 2395 1.074775 GACATCCCACTTGTGCCCA 59.925 57.895 0.00 0.00 0.00 5.36
2014 2463 1.406539 ACAAGACAGCCACAAAGCAAG 59.593 47.619 0.00 0.00 34.23 4.01
2025 2482 3.855950 GCATGCAAAGAATACAAGACAGC 59.144 43.478 14.21 0.00 0.00 4.40
2282 2739 5.186996 TCAGACAAGGCAAATGAACTTTC 57.813 39.130 0.00 0.00 0.00 2.62
2301 2758 9.023967 CCAAACAAAATTCTACAGAGTTTTCAG 57.976 33.333 8.90 3.69 40.45 3.02
2362 2819 8.511748 ACCAGATACATAATCAACCTAGGAAT 57.488 34.615 17.98 2.87 37.03 3.01
2439 2896 3.762407 TGCCAAGTAGACTAGCACAAA 57.238 42.857 3.79 0.00 32.55 2.83
2445 2902 7.225538 CCACTAATCAAATGCCAAGTAGACTAG 59.774 40.741 0.00 0.00 0.00 2.57
2450 2907 4.398988 TGCCACTAATCAAATGCCAAGTAG 59.601 41.667 0.00 0.00 0.00 2.57
2496 2956 6.451393 TGTTGGGCATGAACTTGTTATAAAC 58.549 36.000 0.00 0.00 0.00 2.01
2497 2957 6.266558 ACTGTTGGGCATGAACTTGTTATAAA 59.733 34.615 0.00 0.00 0.00 1.40
2498 2958 5.772672 ACTGTTGGGCATGAACTTGTTATAA 59.227 36.000 0.00 0.00 0.00 0.98
2598 3058 9.832445 CAACTAAATATTCAACTAGGCCTTAGA 57.168 33.333 12.58 0.54 33.39 2.10
2735 3196 2.149383 AGCCACAACAGGAGCAGGA 61.149 57.895 0.00 0.00 0.00 3.86
2814 3275 3.341823 CCACAAAGACATCTCAAGGGAG 58.658 50.000 0.00 0.00 42.80 4.30
2815 3276 2.553028 GCCACAAAGACATCTCAAGGGA 60.553 50.000 0.00 0.00 0.00 4.20
2833 3294 7.601856 CCTCACAAAATATGAACTTTAAGCCA 58.398 34.615 0.00 0.00 0.00 4.75
2876 3337 5.834169 AGATATAGCAGATCGCATCAGATG 58.166 41.667 5.98 5.98 46.13 2.90
2943 3405 4.718940 TGTCGATAGCAGAGATCACAAA 57.281 40.909 0.00 0.00 0.00 2.83
2948 3410 3.187432 TCACGATGTCGATAGCAGAGATC 59.813 47.826 9.67 0.00 43.02 2.75
2966 3428 0.106469 TCTCCCTCTCCCTCATCACG 60.106 60.000 0.00 0.00 0.00 4.35
3109 3573 6.474102 GCAATTCACAACCGAAGAAACTTAAA 59.526 34.615 0.00 0.00 0.00 1.52
3110 3574 5.974751 GCAATTCACAACCGAAGAAACTTAA 59.025 36.000 0.00 0.00 0.00 1.85
3111 3575 5.298276 AGCAATTCACAACCGAAGAAACTTA 59.702 36.000 0.00 0.00 0.00 2.24
3117 3581 1.879380 CCAGCAATTCACAACCGAAGA 59.121 47.619 0.00 0.00 0.00 2.87
3121 3585 1.080569 GCCCAGCAATTCACAACCG 60.081 57.895 0.00 0.00 0.00 4.44
3151 3615 2.593026 GGATTCCAGGAACCAAACACA 58.407 47.619 3.18 0.00 0.00 3.72
3159 3623 2.558359 CAACTTGTGGGATTCCAGGAAC 59.442 50.000 3.18 0.00 45.05 3.62
3177 3641 3.118592 AGCATAACTACTCCCTGCTCAAC 60.119 47.826 0.00 0.00 38.78 3.18
3181 3645 4.576330 AAAAGCATAACTACTCCCTGCT 57.424 40.909 0.00 0.00 44.62 4.24
3184 3648 4.722279 AGCCTAAAAGCATAACTACTCCCT 59.278 41.667 0.00 0.00 34.23 4.20
3185 3649 5.037383 AGCCTAAAAGCATAACTACTCCC 57.963 43.478 0.00 0.00 34.23 4.30
3186 3650 7.985752 TCTTAAGCCTAAAAGCATAACTACTCC 59.014 37.037 0.00 0.00 34.23 3.85
3187 3651 8.943909 TCTTAAGCCTAAAAGCATAACTACTC 57.056 34.615 0.00 0.00 34.23 2.59
3189 3653 8.719560 ACTCTTAAGCCTAAAAGCATAACTAC 57.280 34.615 0.00 0.00 34.23 2.73
3195 5156 9.907229 ATTAAGTACTCTTAAGCCTAAAAGCAT 57.093 29.630 0.00 0.00 45.45 3.79
3203 5164 8.041919 GGAGTTTGATTAAGTACTCTTAAGCCT 58.958 37.037 11.56 4.23 45.96 4.58
3204 5165 7.280428 GGGAGTTTGATTAAGTACTCTTAAGCC 59.720 40.741 11.56 5.35 45.96 4.35
3206 5167 9.720769 TTGGGAGTTTGATTAAGTACTCTTAAG 57.279 33.333 0.00 0.00 45.45 1.85
3209 5170 8.990163 TTTTGGGAGTTTGATTAAGTACTCTT 57.010 30.769 0.00 0.00 37.68 2.85
3210 5171 9.232473 GATTTTGGGAGTTTGATTAAGTACTCT 57.768 33.333 0.00 0.00 37.68 3.24
3215 5176 8.923270 TCAAAGATTTTGGGAGTTTGATTAAGT 58.077 29.630 2.09 0.00 33.33 2.24
3234 5195 6.455360 TTCTGCACAAGTTTCTTCAAAGAT 57.545 33.333 0.00 0.00 34.49 2.40
3277 5238 4.278170 AGAATTTGGCAGTTTGATCGAACA 59.722 37.500 24.58 6.22 31.94 3.18
3301 5262 9.295825 AGGATGTATTCTACACATGTTTTTCAA 57.704 29.630 0.00 0.00 42.23 2.69
3302 5263 8.862325 AGGATGTATTCTACACATGTTTTTCA 57.138 30.769 0.00 0.00 42.23 2.69
3306 5267 9.770097 CATCTAGGATGTATTCTACACATGTTT 57.230 33.333 0.00 0.00 42.23 2.83
3307 5268 9.147732 TCATCTAGGATGTATTCTACACATGTT 57.852 33.333 0.00 0.00 42.23 2.71
3308 5269 8.712228 TCATCTAGGATGTATTCTACACATGT 57.288 34.615 0.00 0.00 42.23 3.21
3310 5271 9.147732 TGTTCATCTAGGATGTATTCTACACAT 57.852 33.333 7.30 0.00 42.23 3.21
3312 5273 9.469807 CTTGTTCATCTAGGATGTATTCTACAC 57.530 37.037 7.30 0.00 42.23 2.90
3313 5274 8.642432 CCTTGTTCATCTAGGATGTATTCTACA 58.358 37.037 7.30 0.00 40.60 2.74
3314 5275 8.861086 TCCTTGTTCATCTAGGATGTATTCTAC 58.139 37.037 7.30 0.00 41.66 2.59
3315 5276 9.434275 TTCCTTGTTCATCTAGGATGTATTCTA 57.566 33.333 7.30 0.00 44.75 2.10
3316 5277 7.921041 TCCTTGTTCATCTAGGATGTATTCT 57.079 36.000 7.30 0.00 41.66 2.40
3317 5278 9.213799 GATTCCTTGTTCATCTAGGATGTATTC 57.786 37.037 7.30 0.00 44.75 1.75
3318 5279 8.943085 AGATTCCTTGTTCATCTAGGATGTATT 58.057 33.333 7.30 0.00 44.75 1.89
3319 5280 8.373981 CAGATTCCTTGTTCATCTAGGATGTAT 58.626 37.037 7.30 0.00 44.75 2.29
3320 5281 7.202038 CCAGATTCCTTGTTCATCTAGGATGTA 60.202 40.741 7.30 0.00 44.75 2.29
3321 5282 6.409005 CCAGATTCCTTGTTCATCTAGGATGT 60.409 42.308 7.30 0.00 44.75 3.06
3322 5283 5.996513 CCAGATTCCTTGTTCATCTAGGATG 59.003 44.000 1.50 1.50 44.75 3.51
3323 5284 5.072872 CCCAGATTCCTTGTTCATCTAGGAT 59.927 44.000 0.00 0.00 44.75 3.24
3324 5285 4.410228 CCCAGATTCCTTGTTCATCTAGGA 59.590 45.833 0.00 0.00 44.00 2.94
3325 5286 4.410228 TCCCAGATTCCTTGTTCATCTAGG 59.590 45.833 0.00 0.00 39.74 3.02
3326 5287 5.130145 ACTCCCAGATTCCTTGTTCATCTAG 59.870 44.000 0.00 0.00 0.00 2.43
3327 5288 5.032846 ACTCCCAGATTCCTTGTTCATCTA 58.967 41.667 0.00 0.00 0.00 1.98
3328 5289 3.848975 ACTCCCAGATTCCTTGTTCATCT 59.151 43.478 0.00 0.00 0.00 2.90
3329 5290 3.944015 CACTCCCAGATTCCTTGTTCATC 59.056 47.826 0.00 0.00 0.00 2.92
3330 5291 3.308688 CCACTCCCAGATTCCTTGTTCAT 60.309 47.826 0.00 0.00 0.00 2.57
3331 5292 2.040278 CCACTCCCAGATTCCTTGTTCA 59.960 50.000 0.00 0.00 0.00 3.18
3332 5293 2.305927 TCCACTCCCAGATTCCTTGTTC 59.694 50.000 0.00 0.00 0.00 3.18
3333 5294 2.307098 CTCCACTCCCAGATTCCTTGTT 59.693 50.000 0.00 0.00 0.00 2.83
3334 5295 1.912043 CTCCACTCCCAGATTCCTTGT 59.088 52.381 0.00 0.00 0.00 3.16
3343 5304 1.115467 ATTCGTAGCTCCACTCCCAG 58.885 55.000 0.00 0.00 0.00 4.45
3362 5323 7.342769 TCAGTAATTATCAGGCTTCGAGTAA 57.657 36.000 0.00 0.00 0.00 2.24
3363 5324 6.954487 TCAGTAATTATCAGGCTTCGAGTA 57.046 37.500 0.00 0.00 0.00 2.59
3374 5335 7.336931 GGAAGACAGCCTTTTCAGTAATTATCA 59.663 37.037 0.00 0.00 34.68 2.15
3379 5340 4.985538 TGGAAGACAGCCTTTTCAGTAAT 58.014 39.130 0.00 0.00 34.68 1.89
3400 5361 8.803397 ACATTATCCATTCTATCACCATGATG 57.197 34.615 0.00 0.00 37.70 3.07
3401 5362 9.818270 AAACATTATCCATTCTATCACCATGAT 57.182 29.630 0.00 0.00 40.72 2.45
3402 5363 9.070179 CAAACATTATCCATTCTATCACCATGA 57.930 33.333 0.00 0.00 0.00 3.07
3406 5367 6.294731 GGGCAAACATTATCCATTCTATCACC 60.295 42.308 0.00 0.00 0.00 4.02
3410 5387 6.207417 CGAAGGGCAAACATTATCCATTCTAT 59.793 38.462 0.00 0.00 37.28 1.98
3474 5451 0.040958 GCAGCCTGTGTCGACTTTTG 60.041 55.000 17.92 7.73 0.00 2.44
3475 5452 0.179045 AGCAGCCTGTGTCGACTTTT 60.179 50.000 17.92 0.00 0.00 2.27
3476 5453 0.679505 TAGCAGCCTGTGTCGACTTT 59.320 50.000 17.92 0.00 0.00 2.66
3477 5454 0.244994 CTAGCAGCCTGTGTCGACTT 59.755 55.000 17.92 0.00 0.00 3.01
3478 5455 0.609406 TCTAGCAGCCTGTGTCGACT 60.609 55.000 17.92 0.00 0.00 4.18
3479 5456 0.243907 TTCTAGCAGCCTGTGTCGAC 59.756 55.000 9.11 9.11 0.00 4.20
3480 5457 1.134995 CATTCTAGCAGCCTGTGTCGA 60.135 52.381 0.00 0.00 0.00 4.20
3481 5458 1.284657 CATTCTAGCAGCCTGTGTCG 58.715 55.000 0.00 0.00 0.00 4.35
3482 5459 1.208052 TCCATTCTAGCAGCCTGTGTC 59.792 52.381 0.00 0.00 0.00 3.67
3483 5460 1.279496 TCCATTCTAGCAGCCTGTGT 58.721 50.000 0.00 0.00 0.00 3.72
3484 5461 2.634815 ATCCATTCTAGCAGCCTGTG 57.365 50.000 0.00 0.00 0.00 3.66
3485 5462 4.103785 ACATTATCCATTCTAGCAGCCTGT 59.896 41.667 0.00 0.00 0.00 4.00
3486 5463 4.649692 ACATTATCCATTCTAGCAGCCTG 58.350 43.478 0.00 0.00 0.00 4.85
3487 5464 4.989875 ACATTATCCATTCTAGCAGCCT 57.010 40.909 0.00 0.00 0.00 4.58
3488 5465 5.766222 CAAACATTATCCATTCTAGCAGCC 58.234 41.667 0.00 0.00 0.00 4.85
3489 5466 5.218139 GCAAACATTATCCATTCTAGCAGC 58.782 41.667 0.00 0.00 0.00 5.25
3490 5467 5.278660 GGGCAAACATTATCCATTCTAGCAG 60.279 44.000 0.00 0.00 0.00 4.24
3491 5468 4.584325 GGGCAAACATTATCCATTCTAGCA 59.416 41.667 0.00 0.00 0.00 3.49
3492 5469 4.829492 AGGGCAAACATTATCCATTCTAGC 59.171 41.667 0.00 0.00 0.00 3.42
3493 5470 6.293626 CGAAGGGCAAACATTATCCATTCTAG 60.294 42.308 0.00 0.00 37.28 2.43
3494 5471 5.530915 CGAAGGGCAAACATTATCCATTCTA 59.469 40.000 0.00 0.00 37.28 2.10
3495 5472 4.339247 CGAAGGGCAAACATTATCCATTCT 59.661 41.667 0.00 0.00 37.28 2.40
3496 5473 4.610945 CGAAGGGCAAACATTATCCATTC 58.389 43.478 0.00 0.00 36.41 2.67
3497 5474 4.654091 CGAAGGGCAAACATTATCCATT 57.346 40.909 0.00 0.00 0.00 3.16
3514 5491 9.314321 TGTAAGAGAATTAAGCTTAATCCGAAG 57.686 33.333 27.56 0.00 32.46 3.79
3515 5492 9.661563 TTGTAAGAGAATTAAGCTTAATCCGAA 57.338 29.630 27.56 11.81 32.46 4.30
3516 5493 9.661563 TTTGTAAGAGAATTAAGCTTAATCCGA 57.338 29.630 27.56 12.95 32.46 4.55
3517 5494 9.922305 CTTTGTAAGAGAATTAAGCTTAATCCG 57.078 33.333 27.56 0.33 32.46 4.18
3521 5498 8.947115 GCTCCTTTGTAAGAGAATTAAGCTTAA 58.053 33.333 20.71 20.71 0.00 1.85
3522 5499 8.322091 AGCTCCTTTGTAAGAGAATTAAGCTTA 58.678 33.333 0.86 0.86 0.00 3.09
3523 5500 7.120432 CAGCTCCTTTGTAAGAGAATTAAGCTT 59.880 37.037 3.48 3.48 0.00 3.74
3524 5501 6.597280 CAGCTCCTTTGTAAGAGAATTAAGCT 59.403 38.462 0.00 0.00 0.00 3.74
3525 5502 6.595716 TCAGCTCCTTTGTAAGAGAATTAAGC 59.404 38.462 0.00 0.00 0.00 3.09
3526 5503 7.821846 AGTCAGCTCCTTTGTAAGAGAATTAAG 59.178 37.037 0.00 0.00 0.00 1.85
3527 5504 7.680730 AGTCAGCTCCTTTGTAAGAGAATTAA 58.319 34.615 0.00 0.00 0.00 1.40
3528 5505 7.246171 AGTCAGCTCCTTTGTAAGAGAATTA 57.754 36.000 0.00 0.00 0.00 1.40
3529 5506 6.120507 AGTCAGCTCCTTTGTAAGAGAATT 57.879 37.500 0.00 0.00 0.00 2.17
3530 5507 5.753721 AGTCAGCTCCTTTGTAAGAGAAT 57.246 39.130 0.00 0.00 0.00 2.40
3531 5508 6.665992 TTAGTCAGCTCCTTTGTAAGAGAA 57.334 37.500 0.00 0.00 0.00 2.87
3532 5509 6.665992 TTTAGTCAGCTCCTTTGTAAGAGA 57.334 37.500 0.00 0.00 0.00 3.10
3533 5510 6.931840 ACTTTTAGTCAGCTCCTTTGTAAGAG 59.068 38.462 0.00 0.00 0.00 2.85
3534 5511 6.827727 ACTTTTAGTCAGCTCCTTTGTAAGA 58.172 36.000 0.00 0.00 0.00 2.10
3535 5512 6.128795 CGACTTTTAGTCAGCTCCTTTGTAAG 60.129 42.308 7.52 0.00 45.30 2.34
3536 5513 5.694910 CGACTTTTAGTCAGCTCCTTTGTAA 59.305 40.000 7.52 0.00 45.30 2.41
3537 5514 5.010314 TCGACTTTTAGTCAGCTCCTTTGTA 59.990 40.000 7.52 0.00 45.30 2.41
3538 5515 4.058817 CGACTTTTAGTCAGCTCCTTTGT 58.941 43.478 7.52 0.00 45.30 2.83
3539 5516 4.150804 GTCGACTTTTAGTCAGCTCCTTTG 59.849 45.833 8.70 0.00 45.30 2.77
3540 5517 4.202223 TGTCGACTTTTAGTCAGCTCCTTT 60.202 41.667 17.92 0.00 45.30 3.11
3541 5518 3.321111 TGTCGACTTTTAGTCAGCTCCTT 59.679 43.478 17.92 0.00 45.30 3.36
3542 5519 2.891580 TGTCGACTTTTAGTCAGCTCCT 59.108 45.455 17.92 0.00 45.30 3.69
3543 5520 2.987821 GTGTCGACTTTTAGTCAGCTCC 59.012 50.000 17.92 0.00 45.30 4.70
3544 5521 3.639538 TGTGTCGACTTTTAGTCAGCTC 58.360 45.455 17.92 1.74 45.30 4.09
3545 5522 3.553096 CCTGTGTCGACTTTTAGTCAGCT 60.553 47.826 17.92 0.00 45.30 4.24
3546 5523 2.731976 CCTGTGTCGACTTTTAGTCAGC 59.268 50.000 17.92 0.47 45.30 4.26
3547 5524 2.731976 GCCTGTGTCGACTTTTAGTCAG 59.268 50.000 17.92 12.18 45.30 3.51
3548 5525 2.364324 AGCCTGTGTCGACTTTTAGTCA 59.636 45.455 17.92 4.10 45.30 3.41
3549 5526 2.731976 CAGCCTGTGTCGACTTTTAGTC 59.268 50.000 17.92 0.00 41.71 2.59
3550 5527 2.364324 TCAGCCTGTGTCGACTTTTAGT 59.636 45.455 17.92 0.00 0.00 2.24
3551 5528 3.026630 TCAGCCTGTGTCGACTTTTAG 57.973 47.619 17.92 9.18 0.00 1.85
3562 5539 1.094073 GCTACCAGCATCAGCCTGTG 61.094 60.000 0.00 0.00 41.89 3.66
3578 5555 5.760253 GCTATAGGTTTGCTCAGAAATGCTA 59.240 40.000 1.04 0.00 0.00 3.49
3624 5601 5.725362 AGATTTTTCGGACAGAGGAAGTAG 58.275 41.667 0.00 0.00 0.00 2.57
3629 5606 4.315803 GACAAGATTTTTCGGACAGAGGA 58.684 43.478 0.00 0.00 0.00 3.71
3630 5607 3.437049 GGACAAGATTTTTCGGACAGAGG 59.563 47.826 0.00 0.00 0.00 3.69
3631 5608 3.123621 CGGACAAGATTTTTCGGACAGAG 59.876 47.826 0.00 0.00 0.00 3.35
3632 5609 3.064207 CGGACAAGATTTTTCGGACAGA 58.936 45.455 0.00 0.00 0.00 3.41
3633 5610 3.064207 TCGGACAAGATTTTTCGGACAG 58.936 45.455 0.00 0.00 0.00 3.51
3634 5611 3.114668 TCGGACAAGATTTTTCGGACA 57.885 42.857 0.00 0.00 0.00 4.02
3635 5612 3.435671 ACATCGGACAAGATTTTTCGGAC 59.564 43.478 0.00 0.00 0.00 4.79
3636 5613 3.670625 ACATCGGACAAGATTTTTCGGA 58.329 40.909 0.00 0.00 0.00 4.55
3637 5614 5.523916 AGATACATCGGACAAGATTTTTCGG 59.476 40.000 0.00 0.00 0.00 4.30
3638 5615 6.589830 AGATACATCGGACAAGATTTTTCG 57.410 37.500 0.00 0.00 0.00 3.46
3639 5616 7.224753 TGCTAGATACATCGGACAAGATTTTTC 59.775 37.037 0.00 0.00 0.00 2.29
3640 5617 7.047891 TGCTAGATACATCGGACAAGATTTTT 58.952 34.615 0.00 0.00 0.00 1.94
3641 5618 6.582636 TGCTAGATACATCGGACAAGATTTT 58.417 36.000 0.00 0.00 0.00 1.82
3642 5619 6.161855 TGCTAGATACATCGGACAAGATTT 57.838 37.500 0.00 0.00 0.00 2.17
3643 5620 5.791336 TGCTAGATACATCGGACAAGATT 57.209 39.130 0.00 0.00 0.00 2.40
3644 5621 5.791336 TTGCTAGATACATCGGACAAGAT 57.209 39.130 0.00 0.00 0.00 2.40
3645 5622 5.791336 ATTGCTAGATACATCGGACAAGA 57.209 39.130 0.00 0.00 0.00 3.02
3646 5623 7.148641 AGTTATTGCTAGATACATCGGACAAG 58.851 38.462 0.00 0.00 0.00 3.16
3647 5624 7.050970 AGTTATTGCTAGATACATCGGACAA 57.949 36.000 0.00 0.00 0.00 3.18
3648 5625 6.650427 AGTTATTGCTAGATACATCGGACA 57.350 37.500 0.00 0.00 0.00 4.02
3649 5626 6.305877 CGAAGTTATTGCTAGATACATCGGAC 59.694 42.308 0.00 0.00 0.00 4.79
3650 5627 6.016527 ACGAAGTTATTGCTAGATACATCGGA 60.017 38.462 0.00 0.00 37.78 4.55
3651 5628 6.088217 CACGAAGTTATTGCTAGATACATCGG 59.912 42.308 0.00 0.00 41.61 4.18
3652 5629 6.637254 ACACGAAGTTATTGCTAGATACATCG 59.363 38.462 0.00 0.00 41.61 3.84
3653 5630 7.932120 ACACGAAGTTATTGCTAGATACATC 57.068 36.000 0.00 0.00 41.61 3.06
3654 5631 9.464714 CTAACACGAAGTTATTGCTAGATACAT 57.535 33.333 0.00 0.00 41.61 2.29
3655 5632 8.680001 TCTAACACGAAGTTATTGCTAGATACA 58.320 33.333 0.00 0.00 41.61 2.29
3656 5633 9.680315 ATCTAACACGAAGTTATTGCTAGATAC 57.320 33.333 0.00 0.00 41.61 2.24
3658 5635 9.680315 GTATCTAACACGAAGTTATTGCTAGAT 57.320 33.333 11.27 11.27 41.61 1.98
3659 5636 8.680001 TGTATCTAACACGAAGTTATTGCTAGA 58.320 33.333 0.00 0.93 41.61 2.43
3660 5637 8.851960 TGTATCTAACACGAAGTTATTGCTAG 57.148 34.615 0.00 0.00 41.61 3.42
3661 5638 9.459640 GATGTATCTAACACGAAGTTATTGCTA 57.540 33.333 0.00 0.00 41.61 3.49
3662 5639 7.438459 GGATGTATCTAACACGAAGTTATTGCT 59.562 37.037 0.00 0.00 41.61 3.91
3663 5640 7.223971 TGGATGTATCTAACACGAAGTTATTGC 59.776 37.037 0.00 0.00 41.61 3.56
3664 5641 8.642908 TGGATGTATCTAACACGAAGTTATTG 57.357 34.615 0.00 0.00 41.61 1.90
3665 5642 9.832445 AATGGATGTATCTAACACGAAGTTATT 57.168 29.630 0.00 0.00 41.61 1.40
3666 5643 9.832445 AAATGGATGTATCTAACACGAAGTTAT 57.168 29.630 0.00 0.00 41.61 1.89
3667 5644 9.093970 CAAATGGATGTATCTAACACGAAGTTA 57.906 33.333 0.00 0.00 41.61 2.24
3668 5645 7.822334 TCAAATGGATGTATCTAACACGAAGTT 59.178 33.333 0.00 0.00 41.61 2.66
3670 5647 7.042456 CCTCAAATGGATGTATCTAACACGAAG 60.042 40.741 0.00 0.00 42.09 3.79
3671 5648 6.761242 CCTCAAATGGATGTATCTAACACGAA 59.239 38.462 0.00 0.00 42.09 3.85
3672 5649 6.097696 TCCTCAAATGGATGTATCTAACACGA 59.902 38.462 0.00 0.00 42.09 4.35
3673 5650 6.280643 TCCTCAAATGGATGTATCTAACACG 58.719 40.000 0.00 0.00 42.09 4.49
3674 5651 7.552687 TGTTCCTCAAATGGATGTATCTAACAC 59.447 37.037 0.00 0.00 42.09 3.32
3675 5652 7.629157 TGTTCCTCAAATGGATGTATCTAACA 58.371 34.615 0.00 0.00 43.86 2.41
3676 5653 8.506168 TTGTTCCTCAAATGGATGTATCTAAC 57.494 34.615 0.00 0.00 35.83 2.34
3677 5654 7.775093 CCTTGTTCCTCAAATGGATGTATCTAA 59.225 37.037 0.00 0.00 35.83 2.10
3678 5655 7.092444 ACCTTGTTCCTCAAATGGATGTATCTA 60.092 37.037 0.00 0.00 35.83 1.98
3679 5656 6.125029 CCTTGTTCCTCAAATGGATGTATCT 58.875 40.000 0.00 0.00 35.83 1.98
3680 5657 5.888161 ACCTTGTTCCTCAAATGGATGTATC 59.112 40.000 0.00 0.00 35.83 2.24
3681 5658 5.831103 ACCTTGTTCCTCAAATGGATGTAT 58.169 37.500 0.00 0.00 35.83 2.29
3682 5659 5.255397 ACCTTGTTCCTCAAATGGATGTA 57.745 39.130 0.00 0.00 35.83 2.29
3683 5660 4.118168 ACCTTGTTCCTCAAATGGATGT 57.882 40.909 0.00 0.00 35.83 3.06
3684 5661 4.322198 CCAACCTTGTTCCTCAAATGGATG 60.322 45.833 0.00 0.00 36.92 3.51
3685 5662 3.834231 CCAACCTTGTTCCTCAAATGGAT 59.166 43.478 0.00 0.00 36.92 3.41
3686 5663 3.230134 CCAACCTTGTTCCTCAAATGGA 58.770 45.455 0.00 0.00 36.92 3.41
3687 5664 2.299867 CCCAACCTTGTTCCTCAAATGG 59.700 50.000 0.00 0.00 35.48 3.16
3688 5665 3.005791 GTCCCAACCTTGTTCCTCAAATG 59.994 47.826 0.00 0.00 35.48 2.32
3689 5666 3.230976 GTCCCAACCTTGTTCCTCAAAT 58.769 45.455 0.00 0.00 35.48 2.32
3690 5667 2.024846 TGTCCCAACCTTGTTCCTCAAA 60.025 45.455 0.00 0.00 35.48 2.69
3691 5668 1.566703 TGTCCCAACCTTGTTCCTCAA 59.433 47.619 0.00 0.00 34.61 3.02
3692 5669 1.217916 TGTCCCAACCTTGTTCCTCA 58.782 50.000 0.00 0.00 0.00 3.86
3693 5670 2.358322 TTGTCCCAACCTTGTTCCTC 57.642 50.000 0.00 0.00 0.00 3.71
3694 5671 2.024369 AGTTTGTCCCAACCTTGTTCCT 60.024 45.455 0.00 0.00 0.00 3.36
3695 5672 2.384828 AGTTTGTCCCAACCTTGTTCC 58.615 47.619 0.00 0.00 0.00 3.62
3696 5673 4.465632 AAAGTTTGTCCCAACCTTGTTC 57.534 40.909 0.00 0.00 0.00 3.18
3697 5674 4.901197 AAAAGTTTGTCCCAACCTTGTT 57.099 36.364 0.00 0.00 0.00 2.83
3698 5675 4.619628 CGAAAAAGTTTGTCCCAACCTTGT 60.620 41.667 0.00 0.00 0.00 3.16
3699 5676 3.862845 CGAAAAAGTTTGTCCCAACCTTG 59.137 43.478 0.00 0.00 0.00 3.61
3700 5677 3.118920 CCGAAAAAGTTTGTCCCAACCTT 60.119 43.478 0.00 0.00 0.00 3.50
3701 5678 2.429250 CCGAAAAAGTTTGTCCCAACCT 59.571 45.455 0.00 0.00 0.00 3.50
3702 5679 2.427812 TCCGAAAAAGTTTGTCCCAACC 59.572 45.455 0.00 0.00 0.00 3.77
3703 5680 3.441163 GTCCGAAAAAGTTTGTCCCAAC 58.559 45.455 0.00 0.00 0.00 3.77
3704 5681 2.097791 CGTCCGAAAAAGTTTGTCCCAA 59.902 45.455 0.00 0.00 0.00 4.12
3705 5682 1.671845 CGTCCGAAAAAGTTTGTCCCA 59.328 47.619 0.00 0.00 0.00 4.37
3706 5683 1.002142 CCGTCCGAAAAAGTTTGTCCC 60.002 52.381 0.00 0.00 0.00 4.46
3707 5684 1.941975 TCCGTCCGAAAAAGTTTGTCC 59.058 47.619 0.00 0.00 0.00 4.02
3708 5685 3.551551 CATCCGTCCGAAAAAGTTTGTC 58.448 45.455 0.00 0.00 0.00 3.18
3709 5686 2.287368 GCATCCGTCCGAAAAAGTTTGT 60.287 45.455 0.00 0.00 0.00 2.83
3710 5687 2.287308 TGCATCCGTCCGAAAAAGTTTG 60.287 45.455 0.00 0.00 0.00 2.93
3711 5688 1.950909 TGCATCCGTCCGAAAAAGTTT 59.049 42.857 0.00 0.00 0.00 2.66
3712 5689 1.535462 CTGCATCCGTCCGAAAAAGTT 59.465 47.619 0.00 0.00 0.00 2.66
3713 5690 1.156736 CTGCATCCGTCCGAAAAAGT 58.843 50.000 0.00 0.00 0.00 2.66
3714 5691 1.156736 ACTGCATCCGTCCGAAAAAG 58.843 50.000 0.00 0.00 0.00 2.27
3715 5692 2.459060 TACTGCATCCGTCCGAAAAA 57.541 45.000 0.00 0.00 0.00 1.94
3716 5693 2.684001 ATACTGCATCCGTCCGAAAA 57.316 45.000 0.00 0.00 0.00 2.29
3717 5694 2.684001 AATACTGCATCCGTCCGAAA 57.316 45.000 0.00 0.00 0.00 3.46
3718 5695 3.649073 CATAATACTGCATCCGTCCGAA 58.351 45.455 0.00 0.00 0.00 4.30
3719 5696 2.609491 GCATAATACTGCATCCGTCCGA 60.609 50.000 0.00 0.00 41.87 4.55
3720 5697 1.726791 GCATAATACTGCATCCGTCCG 59.273 52.381 0.00 0.00 41.87 4.79
3721 5698 2.766313 TGCATAATACTGCATCCGTCC 58.234 47.619 0.00 0.00 46.76 4.79
3739 5716 1.469767 CCGCTTTAAAGATGCCCTTGC 60.470 52.381 19.48 0.00 34.79 4.01
3740 5717 2.091541 TCCGCTTTAAAGATGCCCTTG 58.908 47.619 19.48 0.00 34.79 3.61
3741 5718 2.092323 GTCCGCTTTAAAGATGCCCTT 58.908 47.619 19.48 0.00 36.47 3.95
3742 5719 1.682087 GGTCCGCTTTAAAGATGCCCT 60.682 52.381 19.48 0.00 0.00 5.19
3743 5720 0.738975 GGTCCGCTTTAAAGATGCCC 59.261 55.000 19.48 8.71 0.00 5.36
3744 5721 0.738975 GGGTCCGCTTTAAAGATGCC 59.261 55.000 19.48 13.15 0.00 4.40
3745 5722 1.751437 AGGGTCCGCTTTAAAGATGC 58.249 50.000 19.48 3.62 0.00 3.91
3746 5723 5.414765 ACTTTAAGGGTCCGCTTTAAAGATG 59.585 40.000 24.27 9.81 42.65 2.90
3747 5724 5.414765 CACTTTAAGGGTCCGCTTTAAAGAT 59.585 40.000 24.27 13.82 42.65 2.40
3748 5725 4.758165 CACTTTAAGGGTCCGCTTTAAAGA 59.242 41.667 24.27 0.00 42.65 2.52
3749 5726 4.615223 GCACTTTAAGGGTCCGCTTTAAAG 60.615 45.833 19.83 19.83 44.24 1.85
3750 5727 3.253921 GCACTTTAAGGGTCCGCTTTAAA 59.746 43.478 1.75 4.28 0.00 1.52
3751 5728 2.815503 GCACTTTAAGGGTCCGCTTTAA 59.184 45.455 1.75 0.00 0.00 1.52
3752 5729 2.429478 GCACTTTAAGGGTCCGCTTTA 58.571 47.619 1.75 0.00 0.00 1.85
3753 5730 1.244816 GCACTTTAAGGGTCCGCTTT 58.755 50.000 1.75 0.00 0.00 3.51
3754 5731 0.608308 GGCACTTTAAGGGTCCGCTT 60.608 55.000 0.00 2.08 0.00 4.68
3755 5732 1.002502 GGCACTTTAAGGGTCCGCT 60.003 57.895 0.00 0.00 0.00 5.52
3756 5733 2.044555 GGGCACTTTAAGGGTCCGC 61.045 63.158 0.71 0.00 31.29 5.54
3757 5734 4.313819 GGGCACTTTAAGGGTCCG 57.686 61.111 0.71 0.00 31.29 4.79
3758 5735 3.487372 GATATGGGCACTTTAAGGGTCC 58.513 50.000 11.49 11.49 45.81 4.46
3759 5736 3.487372 GGATATGGGCACTTTAAGGGTC 58.513 50.000 0.00 0.00 0.00 4.46
3760 5737 2.177016 GGGATATGGGCACTTTAAGGGT 59.823 50.000 0.00 0.00 0.00 4.34
3761 5738 2.447047 AGGGATATGGGCACTTTAAGGG 59.553 50.000 0.00 0.00 0.00 3.95
3762 5739 3.498661 GGAGGGATATGGGCACTTTAAGG 60.499 52.174 0.00 0.00 0.00 2.69
3763 5740 3.756117 GGAGGGATATGGGCACTTTAAG 58.244 50.000 0.00 0.00 0.00 1.85
3764 5741 2.105821 CGGAGGGATATGGGCACTTTAA 59.894 50.000 0.00 0.00 0.00 1.52
3765 5742 1.697432 CGGAGGGATATGGGCACTTTA 59.303 52.381 0.00 0.00 0.00 1.85
3766 5743 0.474184 CGGAGGGATATGGGCACTTT 59.526 55.000 0.00 0.00 0.00 2.66
3767 5744 2.145865 CGGAGGGATATGGGCACTT 58.854 57.895 0.00 0.00 0.00 3.16
3768 5745 3.891817 CGGAGGGATATGGGCACT 58.108 61.111 0.00 0.00 0.00 4.40
3781 5758 2.281345 GGGCTGCATGATCCGGAG 60.281 66.667 11.34 0.00 0.00 4.63
3782 5759 4.240103 CGGGCTGCATGATCCGGA 62.240 66.667 6.61 6.61 38.93 5.14
3784 5761 3.541950 ATCCGGGCTGCATGATCCG 62.542 63.158 0.00 4.53 41.90 4.18
3785 5762 1.970114 CATCCGGGCTGCATGATCC 60.970 63.158 0.00 0.00 0.00 3.36
3786 5763 1.228063 ACATCCGGGCTGCATGATC 60.228 57.895 3.76 0.00 0.00 2.92
3787 5764 2.921435 ACATCCGGGCTGCATGAT 59.079 55.556 3.76 0.00 0.00 2.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.