Multiple sequence alignment - TraesCS4B01G298500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G298500 chr4B 100.000 4802 0 0 1 4802 584124921 584129722 0.000000e+00 8868.0
1 TraesCS4B01G298500 chr4B 97.947 3800 50 9 25 3815 584053596 584057376 0.000000e+00 6560.0
2 TraesCS4B01G298500 chr4B 86.364 1804 118 62 690 2450 583765344 583767062 0.000000e+00 1851.0
3 TraesCS4B01G298500 chr4B 90.916 1233 77 19 2607 3823 583767406 583768619 0.000000e+00 1624.0
4 TraesCS4B01G298500 chr4B 96.076 790 29 2 4011 4799 29627602 29628390 0.000000e+00 1286.0
5 TraesCS4B01G298500 chr4B 95.949 790 30 2 4011 4799 29621683 29622471 0.000000e+00 1280.0
6 TraesCS4B01G298500 chr4B 91.744 860 58 9 2952 3809 584527794 584526946 0.000000e+00 1182.0
7 TraesCS4B01G298500 chr4B 88.770 935 91 12 928 1855 584872324 584873251 0.000000e+00 1133.0
8 TraesCS4B01G298500 chr4B 88.770 935 91 12 928 1855 584897704 584898631 0.000000e+00 1133.0
9 TraesCS4B01G298500 chr4B 88.663 935 92 12 928 1855 584847031 584847958 0.000000e+00 1127.0
10 TraesCS4B01G298500 chr4B 95.890 73 3 0 2361 2433 584528538 584528466 8.440000e-23 119.0
11 TraesCS4B01G298500 chr4D 91.463 2577 127 28 23 2543 466333400 466335939 0.000000e+00 3454.0
12 TraesCS4B01G298500 chr4D 87.030 3215 210 99 690 3823 466292218 466295306 0.000000e+00 3435.0
13 TraesCS4B01G298500 chr4D 90.706 2238 103 26 25 2221 466402413 466404586 0.000000e+00 2883.0
14 TraesCS4B01G298500 chr4D 94.708 1663 53 16 2364 4015 466405060 466406698 0.000000e+00 2551.0
15 TraesCS4B01G298500 chr4D 95.582 1245 44 2 2579 3823 466335945 466337178 0.000000e+00 1984.0
16 TraesCS4B01G298500 chr4D 89.532 1433 89 31 890 2312 466730928 466729547 0.000000e+00 1759.0
17 TraesCS4B01G298500 chr4D 92.465 929 63 5 928 1855 467116702 467117624 0.000000e+00 1321.0
18 TraesCS4B01G298500 chr4D 94.406 858 38 3 2953 3809 466728288 466727440 0.000000e+00 1310.0
19 TraesCS4B01G298500 chr4D 97.203 143 4 0 2219 2361 466404843 466404985 4.800000e-60 243.0
20 TraesCS4B01G298500 chr4D 92.623 122 7 2 2361 2480 466729019 466728898 1.780000e-39 174.0
21 TraesCS4B01G298500 chr4A 90.980 1419 73 18 2613 4015 4194494 4193115 0.000000e+00 1860.0
22 TraesCS4B01G298500 chr4A 93.333 1245 49 16 886 2111 4196478 4195249 0.000000e+00 1808.0
23 TraesCS4B01G298500 chr4A 93.366 1221 58 7 2607 3823 4473169 4471968 0.000000e+00 1784.0
24 TraesCS4B01G298500 chr4A 87.171 1559 96 39 690 2230 4475490 4474018 0.000000e+00 1676.0
25 TraesCS4B01G298500 chr4A 91.220 1230 75 17 2607 3823 4239470 4238261 0.000000e+00 1642.0
26 TraesCS4B01G298500 chr4A 87.500 1472 92 40 690 2133 4241716 4240309 0.000000e+00 1615.0
27 TraesCS4B01G298500 chr4A 85.398 904 83 24 25 894 4197420 4196532 0.000000e+00 893.0
28 TraesCS4B01G298500 chr4A 87.625 299 25 7 2609 2907 4159928 4160214 2.140000e-88 337.0
29 TraesCS4B01G298500 chr4A 92.308 208 10 2 2109 2316 4194992 4194791 1.690000e-74 291.0
30 TraesCS4B01G298500 chr4A 90.306 196 4 1 2270 2450 4474021 4473826 4.800000e-60 243.0
31 TraesCS4B01G298500 chr4A 84.052 232 5 14 2137 2361 4240031 4239825 1.360000e-45 195.0
32 TraesCS4B01G298500 chr4A 91.964 112 6 3 2361 2469 4159598 4159709 2.310000e-33 154.0
33 TraesCS4B01G298500 chr6B 96.460 791 26 2 4014 4802 657253610 657252820 0.000000e+00 1304.0
34 TraesCS4B01G298500 chr6B 96.188 787 27 3 4014 4799 570901276 570902060 0.000000e+00 1284.0
35 TraesCS4B01G298500 chr1B 96.569 787 26 1 4014 4799 365450105 365450891 0.000000e+00 1303.0
36 TraesCS4B01G298500 chr1B 96.315 787 28 1 4014 4799 49437623 49438409 0.000000e+00 1291.0
37 TraesCS4B01G298500 chr5B 96.324 789 28 1 4012 4799 553942086 553942874 0.000000e+00 1295.0
38 TraesCS4B01G298500 chr5B 96.081 791 26 4 4011 4799 553182038 553182825 0.000000e+00 1284.0
39 TraesCS4B01G298500 chr5B 80.723 332 57 7 235 562 338935123 338934795 7.980000e-63 252.0
40 TraesCS4B01G298500 chr2B 96.086 792 30 1 4012 4802 724752485 724751694 0.000000e+00 1290.0
41 TraesCS4B01G298500 chrUn 100.000 396 0 0 1608 2003 479224296 479223901 0.000000e+00 732.0
42 TraesCS4B01G298500 chr1A 82.597 362 53 9 237 592 124346830 124347187 1.300000e-80 311.0
43 TraesCS4B01G298500 chr1D 80.337 356 54 12 235 586 114116095 114116438 6.170000e-64 255.0
44 TraesCS4B01G298500 chr2A 80.442 317 54 6 235 543 644251659 644251343 8.030000e-58 235.0
45 TraesCS4B01G298500 chr2A 81.034 116 22 0 238 353 391843542 391843427 5.120000e-15 93.5
46 TraesCS4B01G298500 chr3B 76.902 368 76 8 237 599 124403977 124404340 2.930000e-47 200.0
47 TraesCS4B01G298500 chr3B 77.337 353 65 12 237 584 648878901 648878559 1.360000e-45 195.0
48 TraesCS4B01G298500 chr5A 80.859 256 46 3 257 510 400794329 400794583 1.050000e-46 198.0
49 TraesCS4B01G298500 chr5A 79.070 258 49 3 247 504 290690557 290690305 6.390000e-39 172.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G298500 chr4B 584124921 584129722 4801 False 8868.000000 8868 100.000000 1 4802 1 chr4B.!!$F4 4801
1 TraesCS4B01G298500 chr4B 584053596 584057376 3780 False 6560.000000 6560 97.947000 25 3815 1 chr4B.!!$F3 3790
2 TraesCS4B01G298500 chr4B 583765344 583768619 3275 False 1737.500000 1851 88.640000 690 3823 2 chr4B.!!$F8 3133
3 TraesCS4B01G298500 chr4B 29627602 29628390 788 False 1286.000000 1286 96.076000 4011 4799 1 chr4B.!!$F2 788
4 TraesCS4B01G298500 chr4B 29621683 29622471 788 False 1280.000000 1280 95.949000 4011 4799 1 chr4B.!!$F1 788
5 TraesCS4B01G298500 chr4B 584872324 584873251 927 False 1133.000000 1133 88.770000 928 1855 1 chr4B.!!$F6 927
6 TraesCS4B01G298500 chr4B 584897704 584898631 927 False 1133.000000 1133 88.770000 928 1855 1 chr4B.!!$F7 927
7 TraesCS4B01G298500 chr4B 584847031 584847958 927 False 1127.000000 1127 88.663000 928 1855 1 chr4B.!!$F5 927
8 TraesCS4B01G298500 chr4B 584526946 584528538 1592 True 650.500000 1182 93.817000 2361 3809 2 chr4B.!!$R1 1448
9 TraesCS4B01G298500 chr4D 466292218 466295306 3088 False 3435.000000 3435 87.030000 690 3823 1 chr4D.!!$F1 3133
10 TraesCS4B01G298500 chr4D 466333400 466337178 3778 False 2719.000000 3454 93.522500 23 3823 2 chr4D.!!$F3 3800
11 TraesCS4B01G298500 chr4D 466402413 466406698 4285 False 1892.333333 2883 94.205667 25 4015 3 chr4D.!!$F4 3990
12 TraesCS4B01G298500 chr4D 467116702 467117624 922 False 1321.000000 1321 92.465000 928 1855 1 chr4D.!!$F2 927
13 TraesCS4B01G298500 chr4D 466727440 466730928 3488 True 1081.000000 1759 92.187000 890 3809 3 chr4D.!!$R1 2919
14 TraesCS4B01G298500 chr4A 4471968 4475490 3522 True 1234.333333 1784 90.281000 690 3823 3 chr4A.!!$R3 3133
15 TraesCS4B01G298500 chr4A 4193115 4197420 4305 True 1213.000000 1860 90.504750 25 4015 4 chr4A.!!$R1 3990
16 TraesCS4B01G298500 chr4A 4238261 4241716 3455 True 1150.666667 1642 87.590667 690 3823 3 chr4A.!!$R2 3133
17 TraesCS4B01G298500 chr4A 4159598 4160214 616 False 245.500000 337 89.794500 2361 2907 2 chr4A.!!$F1 546
18 TraesCS4B01G298500 chr6B 657252820 657253610 790 True 1304.000000 1304 96.460000 4014 4802 1 chr6B.!!$R1 788
19 TraesCS4B01G298500 chr6B 570901276 570902060 784 False 1284.000000 1284 96.188000 4014 4799 1 chr6B.!!$F1 785
20 TraesCS4B01G298500 chr1B 365450105 365450891 786 False 1303.000000 1303 96.569000 4014 4799 1 chr1B.!!$F2 785
21 TraesCS4B01G298500 chr1B 49437623 49438409 786 False 1291.000000 1291 96.315000 4014 4799 1 chr1B.!!$F1 785
22 TraesCS4B01G298500 chr5B 553942086 553942874 788 False 1295.000000 1295 96.324000 4012 4799 1 chr5B.!!$F2 787
23 TraesCS4B01G298500 chr5B 553182038 553182825 787 False 1284.000000 1284 96.081000 4011 4799 1 chr5B.!!$F1 788
24 TraesCS4B01G298500 chr2B 724751694 724752485 791 True 1290.000000 1290 96.086000 4012 4802 1 chr2B.!!$R1 790

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
965 1149 0.033366 CACCTCGATCACCACACACA 59.967 55.0 0.0 0.0 0.0 3.72 F
966 1150 0.033504 ACCTCGATCACCACACACAC 59.966 55.0 0.0 0.0 0.0 3.82 F
967 1151 0.033366 CCTCGATCACCACACACACA 59.967 55.0 0.0 0.0 0.0 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2230 3275 8.209802 AGTCTAGGCTAGCTAAACTATCTAGA 57.790 38.462 16.85 15.3 39.15 2.43 R
3786 6161 5.184479 ACGTATGAGTTACTGCTCCTTGTAA 59.816 40.000 0.00 0.0 34.74 2.41 R
3857 6232 5.126396 AGAACGTATTATACCGGCCTTAC 57.874 43.478 0.00 0.0 0.00 2.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
137 142 5.973565 CCATCTTGAAGTGACAAACAAAGTC 59.026 40.000 0.00 0.00 36.55 3.01
138 143 6.404623 CCATCTTGAAGTGACAAACAAAGTCA 60.405 38.462 0.00 0.00 43.23 3.41
140 145 6.378582 TCTTGAAGTGACAAACAAAGTCAAC 58.621 36.000 0.00 0.00 46.50 3.18
291 316 5.291178 TCGTGACGAGGTCTTTCAAATAAA 58.709 37.500 2.39 0.00 33.15 1.40
543 571 7.464045 CGTGCAGATTCAACTATTTCACGAATA 60.464 37.037 5.17 0.00 44.92 1.75
644 688 0.994247 TCTAGGTGGGTGGTAGACGA 59.006 55.000 0.00 0.00 0.00 4.20
819 891 1.227999 CGCCCTTGTCGACACAACAT 61.228 55.000 19.90 0.00 37.61 2.71
963 1147 1.266178 ATCACCTCGATCACCACACA 58.734 50.000 0.00 0.00 0.00 3.72
964 1148 0.317160 TCACCTCGATCACCACACAC 59.683 55.000 0.00 0.00 0.00 3.82
965 1149 0.033366 CACCTCGATCACCACACACA 59.967 55.000 0.00 0.00 0.00 3.72
966 1150 0.033504 ACCTCGATCACCACACACAC 59.966 55.000 0.00 0.00 0.00 3.82
967 1151 0.033366 CCTCGATCACCACACACACA 59.967 55.000 0.00 0.00 0.00 3.72
968 1152 1.139989 CTCGATCACCACACACACAC 58.860 55.000 0.00 0.00 0.00 3.82
969 1153 0.461961 TCGATCACCACACACACACA 59.538 50.000 0.00 0.00 0.00 3.72
970 1154 1.069978 TCGATCACCACACACACACAT 59.930 47.619 0.00 0.00 0.00 3.21
971 1155 1.460743 CGATCACCACACACACACATC 59.539 52.381 0.00 0.00 0.00 3.06
972 1156 1.806542 GATCACCACACACACACATCC 59.193 52.381 0.00 0.00 0.00 3.51
973 1157 0.543749 TCACCACACACACACATCCA 59.456 50.000 0.00 0.00 0.00 3.41
974 1158 0.946528 CACCACACACACACATCCAG 59.053 55.000 0.00 0.00 0.00 3.86
975 1159 0.546122 ACCACACACACACATCCAGT 59.454 50.000 0.00 0.00 0.00 4.00
976 1160 1.064758 ACCACACACACACATCCAGTT 60.065 47.619 0.00 0.00 0.00 3.16
977 1161 1.603802 CCACACACACACATCCAGTTC 59.396 52.381 0.00 0.00 0.00 3.01
978 1162 1.603802 CACACACACACATCCAGTTCC 59.396 52.381 0.00 0.00 0.00 3.62
979 1163 1.211703 ACACACACACATCCAGTTCCA 59.788 47.619 0.00 0.00 0.00 3.53
980 1164 2.158623 ACACACACACATCCAGTTCCAT 60.159 45.455 0.00 0.00 0.00 3.41
981 1165 2.485426 CACACACACATCCAGTTCCATC 59.515 50.000 0.00 0.00 0.00 3.51
982 1166 2.086869 CACACACATCCAGTTCCATCC 58.913 52.381 0.00 0.00 0.00 3.51
983 1167 1.704628 ACACACATCCAGTTCCATCCA 59.295 47.619 0.00 0.00 0.00 3.41
984 1168 2.108075 ACACACATCCAGTTCCATCCAA 59.892 45.455 0.00 0.00 0.00 3.53
985 1169 2.489329 CACACATCCAGTTCCATCCAAC 59.511 50.000 0.00 0.00 0.00 3.77
1010 1219 1.696097 GGGTAGACGATGGCCATGGT 61.696 60.000 30.91 30.91 32.33 3.55
1530 1751 4.754322 TGCATGCTTGTTTCGAGATACTA 58.246 39.130 20.33 0.00 0.00 1.82
1531 1752 4.566759 TGCATGCTTGTTTCGAGATACTAC 59.433 41.667 20.33 0.00 0.00 2.73
1532 1753 4.806247 GCATGCTTGTTTCGAGATACTACT 59.194 41.667 11.37 0.00 0.00 2.57
3717 6092 3.197790 GACGGCATGTGCGCAGAT 61.198 61.111 15.24 15.24 43.26 2.90
3786 6161 1.472480 GCGCCATACAACAACAAGGAT 59.528 47.619 0.00 0.00 0.00 3.24
4105 6499 0.038744 CAGTCATGCCCCCAGAAGTT 59.961 55.000 0.00 0.00 0.00 2.66
4139 6533 2.841988 GGGCCAAAACTGGTGCCA 60.842 61.111 4.39 0.00 45.83 4.92
4158 6552 4.760047 CAGACCCAGGCCGAACCG 62.760 72.222 0.00 0.00 46.52 4.44
4472 6867 4.096003 CCACCGGGCCTGTCGAAT 62.096 66.667 11.58 0.00 0.00 3.34
4694 7089 2.495409 TTCATCGTCGCCCGGCTAT 61.495 57.895 8.05 0.00 37.11 2.97
4706 7102 4.221422 GGCTATGCCGAGGCGACA 62.221 66.667 9.78 0.00 45.51 4.35
4799 7195 3.307906 TCGGCGTGCAGTACCCTT 61.308 61.111 6.85 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.531857 TTTCAACCTTATGCCTTATTGTTCA 57.468 32.000 0.00 0.0 0.00 3.18
1 2 8.825667 TTTTTCAACCTTATGCCTTATTGTTC 57.174 30.769 0.00 0.0 0.00 3.18
2 3 9.435688 GATTTTTCAACCTTATGCCTTATTGTT 57.564 29.630 0.00 0.0 0.00 2.83
3 4 8.815912 AGATTTTTCAACCTTATGCCTTATTGT 58.184 29.630 0.00 0.0 0.00 2.71
4 5 9.657419 AAGATTTTTCAACCTTATGCCTTATTG 57.343 29.630 0.00 0.0 0.00 1.90
8 9 8.478066 GGATAAGATTTTTCAACCTTATGCCTT 58.522 33.333 0.00 0.0 35.37 4.35
9 10 7.619302 TGGATAAGATTTTTCAACCTTATGCCT 59.381 33.333 0.00 0.0 38.40 4.75
10 11 7.781056 TGGATAAGATTTTTCAACCTTATGCC 58.219 34.615 0.00 0.0 38.40 4.40
11 12 9.651913 TTTGGATAAGATTTTTCAACCTTATGC 57.348 29.630 0.00 0.0 39.10 3.14
137 142 8.400947 CACAAATCCTCTCCAGTATAAATGTTG 58.599 37.037 0.00 0.0 0.00 3.33
138 143 7.557719 CCACAAATCCTCTCCAGTATAAATGTT 59.442 37.037 0.00 0.0 0.00 2.71
140 145 6.016777 GCCACAAATCCTCTCCAGTATAAATG 60.017 42.308 0.00 0.0 0.00 2.32
353 378 4.421033 TTTGTTGTTTGTGCGTACTGAA 57.579 36.364 4.97 0.0 0.00 3.02
543 571 3.854669 CCGCTCGATTGCCTCCCT 61.855 66.667 0.00 0.0 0.00 4.20
545 573 3.151958 TAGCCGCTCGATTGCCTCC 62.152 63.158 0.00 0.0 0.00 4.30
644 688 3.814842 TGAGAGAAAAACGATGCACACAT 59.185 39.130 0.00 0.0 39.98 3.21
841 913 1.864263 TTCGAGGGAGCTGGAGGAGA 61.864 60.000 0.00 0.0 0.00 3.71
961 1145 2.553028 GGATGGAACTGGATGTGTGTGT 60.553 50.000 0.00 0.0 0.00 3.72
962 1146 2.086869 GGATGGAACTGGATGTGTGTG 58.913 52.381 0.00 0.0 0.00 3.82
963 1147 1.704628 TGGATGGAACTGGATGTGTGT 59.295 47.619 0.00 0.0 0.00 3.72
964 1148 2.489329 GTTGGATGGAACTGGATGTGTG 59.511 50.000 0.00 0.0 0.00 3.82
965 1149 2.108075 TGTTGGATGGAACTGGATGTGT 59.892 45.455 0.00 0.0 0.00 3.72
966 1150 2.489329 GTGTTGGATGGAACTGGATGTG 59.511 50.000 0.00 0.0 0.00 3.21
967 1151 2.555227 GGTGTTGGATGGAACTGGATGT 60.555 50.000 0.00 0.0 0.00 3.06
968 1152 2.094675 GGTGTTGGATGGAACTGGATG 58.905 52.381 0.00 0.0 0.00 3.51
969 1153 1.995542 AGGTGTTGGATGGAACTGGAT 59.004 47.619 0.00 0.0 0.00 3.41
970 1154 1.444933 AGGTGTTGGATGGAACTGGA 58.555 50.000 0.00 0.0 0.00 3.86
971 1155 1.888512 CAAGGTGTTGGATGGAACTGG 59.111 52.381 0.00 0.0 0.00 4.00
982 1166 2.346803 CATCGTCTACCCAAGGTGTTG 58.653 52.381 0.00 0.0 36.19 3.33
983 1167 1.278127 CCATCGTCTACCCAAGGTGTT 59.722 52.381 0.00 0.0 36.19 3.32
984 1168 0.902531 CCATCGTCTACCCAAGGTGT 59.097 55.000 0.00 0.0 36.19 4.16
985 1169 0.462047 GCCATCGTCTACCCAAGGTG 60.462 60.000 0.00 0.0 36.19 4.00
1010 1219 2.203480 GTGCCCCTTGTCCTTGCA 60.203 61.111 0.00 0.0 0.00 4.08
1530 1751 4.623932 TTGATCTGAACTGGTGCTAAGT 57.376 40.909 0.00 0.0 0.00 2.24
1531 1752 5.645067 TGAATTGATCTGAACTGGTGCTAAG 59.355 40.000 0.00 0.0 0.00 2.18
1532 1753 5.559770 TGAATTGATCTGAACTGGTGCTAA 58.440 37.500 0.00 0.0 0.00 3.09
2230 3275 8.209802 AGTCTAGGCTAGCTAAACTATCTAGA 57.790 38.462 16.85 15.3 39.15 2.43
3786 6161 5.184479 ACGTATGAGTTACTGCTCCTTGTAA 59.816 40.000 0.00 0.0 34.74 2.41
3857 6232 5.126396 AGAACGTATTATACCGGCCTTAC 57.874 43.478 0.00 0.0 0.00 2.34
4004 6398 3.447586 GCTGGAGATGTCCTTACACACTA 59.552 47.826 10.72 0.0 44.30 2.74
4105 6499 3.408020 CGAGCCGGCGAAAAACGA 61.408 61.111 23.20 0.0 45.77 3.85
4139 6533 4.021925 GTTCGGCCTGGGTCTGCT 62.022 66.667 0.00 0.0 0.00 4.24
4291 6685 2.812619 GGAGAGAATGGCGGGAGGG 61.813 68.421 0.00 0.0 0.00 4.30
4472 6867 2.111999 CTTCCACCCTTCACTCGGCA 62.112 60.000 0.00 0.0 0.00 5.69
4481 6876 1.073199 CCGCTGAACTTCCACCCTT 59.927 57.895 0.00 0.0 0.00 3.95
4706 7102 2.898343 GTTGAACCCACCGTGCGT 60.898 61.111 0.00 0.0 0.00 5.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.